Pregenerated sensors for GULO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034450Ensembl transcript IDs: ENSMUST00000059970.9
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTGGAGATGCAAACAGGAATTTGAGTGAGAGGCCACTTCTTGCCTaGGGTGTTATGAAGATGATAAAGAAGGCAGAGGCCTCGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RGDANRNLSERPLLA*GVMKMIKKAEASAR Trigger: TCTGGCCGAGGCCTCTGCCTTCTTTATCATCTTCATAACACCCCAGGCAAGAAGTGGCCTCTCACTCAAATTCCTGTTTGCATCTCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR CCA 90 bp | TATCTTTCAGAGTCTTTTAATTCTGACAAAGTACCTGGAACATATTaGCTCTCCAAGGAACATTCCAGAAAGGCCACAAATAAACTGAAA | + |
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Preference number: 1 (lower is better) Translates to: YLSESFNSDKVPGTY*LSKEHSRKATNKLK Trigger: TTTCAGTTTATTTGTGGCCTTTCTGGAATGTTCCTTGGAGAGCCAATATGTTCCAGGTACTTTGTCAGAATTAAAAGACTCTGAAAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTGCCTGGGGTGTTATGAAGATGATAAAGAAGGCAGAGGCCTCGGCCAGAGCCCAAGGCAGCAGAAGTaGGGGGTCAGGGCAGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: SCLGCYEDDKEGRGLGQSPRQQK*GVRAAC Trigger: GCAAGCTGCCCTGACCCCTCACTTCTGCTGCCTTGG...GCTCTGGCCGAGGCCTCTGCCTTCTTTATCATCTTCATAACACCCCAGGCAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR GCA 90 bp | GAAACCAAGACCCAGGGAAACCCAGGGACACGGCGAGATCCCAGCCCAAAGAATGCAGAGCATGCCTCATaGTACCTCTGTTGCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: ETKTQGNPGTRRDPSPKNAEHAS*YLCCQE Trigger: CTCTTGGCAACAGAGGTAGCATGAGGCATGCTCTGC...ATTCTTTGGGCTGGGATCTCGCCGTGTCCCTGGGTTTCCCTGGGTCTTGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGCTTGCTCAGGACCAACAGACAGACTCTGGGCATCTGAAAGGCCTTTAAGGAGAGGGAGGGAAAACTaGAGGCCCCAGGGATCTCTC | + |
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Preference number: 2 (lower is better) Translates to: MACSGPTDRLWASERPLRRGREN*RPQGSL Trigger: GAGAGATCCCTGGGGCCTGCAGTTTTCCCTCCCTCT...CCTTAAAGGCCTTTCAGATGCCCAGAGTCTGTCTGTTGGTCCTGAGCAAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR TCA 90 bp | GACAAAGTACCTGGAACATATTGGCTCTCCAAGGAACATTCCAGAAAGGCCACACCGAAAGAGACACTGTaGGGGCCAGGCCATGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: DKVPGTYWLSKEHSRKATPKETL*GPGHGS Trigger: ACTGCCATGGCCTGGCCCTCACAGTGTCTCTTTCGG...TGTGGCCTTTCTGGAATGTTCCTTGGAGAGCCAATATGTTCCAGGTACTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR TCA 90 bp | AGATCCCTTCTGAAGAGGGAGGGAAAACTGCAGGCCCCAGGGATCTCTCTATACAAACAGGAATTTGAGTaGGAGGCCACTTCTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RSLLKREGKLQAPGISLYKQEFE*EATSCL Trigger: CAGGCAAGAAGTGGCCTCTCACTCAAATTCCTGTTT...GTATAGAGAGATCCCTGGGGCCTGCAGTTTTCCCTCCCTCTTCAGAAGGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR CCA 90 bp | GACCCATCTGGAAGATGGCTTGCTCAGGACCAACAGACAGACTCTGGGCATCTGACCAAATCCTTAGCCTaGACAGATATGATGCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: DPSGRWLAQDQQTDSGHLTKSLA*TDMMQG Trigger: CCCTTGCATCATATCTGTCCAGGCTAAGGATTTGGT...CAGATGCCCAGAGTCTGTCTGTTGGTCCTGAGCAAGCCATCTTCCAGATGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR CCA 90 bp | GAAACCAAGACCCAGGGAAACCCAGGGACACGGCGAGATCCCAGCCCAAAGAATGGATCTAACAGGAACTaGTTAAGAAGACGAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: ETKTQGNPGTRRDPSPKNGSNRN*LRRRGK Trigger: TTTGCCTCGTCTTCTTAACCAGTTCCTGTTAGATCC...ATTCTTTGGGCTGGGATCTCGCCGTGTCCCTGGGTTTCCCTGGGTCTTGGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTTCTGAAGAGGGAGGGAAAACTGCAGGCCCCAGGGATCTCTCTATACTTATGCAAACAGGAATTTaGGTGAGAGGCCACTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: IPSEEGGKTAGPRDLSILMQTGI*VRGHFL Trigger: CAAGAAGTGGCCTCTCACTCAAATTCCTGTTTGCAT...AAGTATAGAGAGATCCCTGGGGCCTGCAGTTTTCCCTCCCTCTTCAGAAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTTGCTCAGGACCAACAGACAGACTCTGGGCATCTGAAAGGCCTTTAAGGAGGCCACTTCTTGCCTaGGGTGTTATGAAGATGATA | + |
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Preference number: 2 (lower is better) Translates to: MACSGPTDRLWASERPLRRPLLA*GVMKMI Trigger: TATCATCTTCATAACACCCCAGGCAAGAAGTGGCCT...CCTTAAAGGCCTTTCAGATGCCCAGAGTCTGTCTGTTGGTCCTGAGCAAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR CAA 90 bp | GATGATTGTAGTTTATGTATGGCTCGTGGAGATGCAAACAGGAATTaGAGTGAGAGGCCACTTCTTGCCTGGGGTGTTATGAAGATGATA | + |
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Preference number: 2 (lower is better) Translates to: DDCSLCMARGDANRN*SERPLLAWGVMKMI Trigger: TATCATCTTCATAACACCCCAGGCAAGAAGTGGCCTCTCACTCAAATTCCTGTTTGCATCTCCACGAGCCATACATAAACTACAATCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR CAA 90 bp | ACACCACCCGAAAGAGACACTGTGAGGGCCAGGCCATGGCAGTCAGAAGGCCACCATCTGGAAGATGGCTaGCTCAGGACCAACAGACAG | + |
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Preference number: 3 (lower is better) Translates to: TPPERDTVRARPWQSEGHHLEDG*LRTNRQ Trigger: CTGTCTGTTGGTCCTGAGCAAGCCATCTTCCAGATG...GTGGCCTTCTGACTGCCATGGCCTGGCCCTCACAGTGTCTCTTTCGGGTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR CCA 72 bp | CAGGCCATGGCAGTCAGAAGGCCACGTGGACCCATCTaGAAGATGGCTTGCTCAGGACCAACAGACAGACTC | + |
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Preference number: 3 (lower is better) Translates to: QAMAVRRPRGPI*KMACSGPTDRL Trigger: GAGTCTGTCTGTTGGTCCTGAGCAAGCCATCTTCCAGATGGGTCCACGTGGCCTTCTGACTGCCATGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR TCA 72 bp | TGCCTCATGCTACCTCTGTTGCCAAGAGATCCCTTCTaGAGAGGGAGGGAAAACTGCAGGCCCCAGGGATCT | + |
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Preference number: 3 (lower is better) Translates to: CLMLPLLPRDPF*RGRENCRPQGS Trigger: AGATCCCTGGGGCCTGCAGTTTTCCCTCCCTCTTCAGAAGGGATCTCTTGGCAACAGAGGTAGCATGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR TCA 72 bp | GGGACACGGCGAGATCCCAGCCCAAAGAATTGTCTCTaGGGTGAAGGGAGAAAACACAGGGATCTAACAGGA | + |
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Preference number: 3 (lower is better) Translates to: GTRRDPSPKNCL*GEGRKHRDLTG Trigger: TCCTGTTAGATCCCTGTGTTTTCTCCCTTCACCTCAGAGACAATTCTTTGGGCTGGGATCTCGCCGTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR CAA 90 bp | CAAAGTACCTGGAACATATTGGCTCTCCAAGGAACATTCCAGAAAGGCCACAAAGAGCCCAGCCCCTCCTaGTGTTCAGGAGAGGTCGTC | + |
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Preference number: 3 (lower is better) Translates to: QSTWNILALQGTFQKGHKEPSPS*CSGEVV Trigger: GACGACCTCTCCTGAACACAAGGAGGGGCTGGGCTC...TTTGTGGCCTTTCTGGAATGTTCCTTGGAGAGCCAATATGTTCCAGGTACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR-3UTR CAA 90 bp | GACCCATCTGGAAGATGGCTTGCTCAGGACCAACAGACAGACTCTGGGCATCTGGATGCAAACAGGAATTaGAGTGAGAGGCCACTTCTT | + |
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Preference number: 3 (lower is better) Translates to: DPSGRWLAQDQQTDSGHLDANRN*SERPLL Trigger: AAGAAGTGGCCTCTCACTCAAATTCCTGTTTGCATC...CAGATGCCCAGAGTCTGTCTGTTGGTCCTGAGCAAGCCATCTTCCAGATGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR TCA 72 bp | ACGGCGAGATCCCAGCCCAAAGAATTGTCTCTGAGGTaGAGGGAGAAAACACAGGGATCTAACAGGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: TARSQPKELSLR*REKTQGSNRNW Trigger: CCAGTTCCTGTTAGATCCCTGTGTTTTCTCCCTTCACCTCAGAGACAATTCTTTGGGCTGGGATCTCGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR TCA 72 bp | GGCTTGCTCAGGACCAACAGACAGACTCTGGGCATCTaGAAGGCCTTTAAGGATAAAAGTAAGCAGAGCATG | + |
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Preference number: 3 (lower is better) Translates to: GLLRTNRQTLGI*KAFKDKSKQSM Trigger: CATGCTCTGCTTACTTTTATCCTTAAAGGCCTTTCAGATGCCCAGAGTCTGTCTGTTGGTCCTGAGCAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR CCA 72 bp | GCAAACAGGAATTTGAGTGAGAGGCCACTTCTTGCCTaGGGTGTTATGAAGATGATAAAGAAGGCAGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: ANRNLSERPLLA*GVMKMIKKAEA Trigger: GGCCTCTGCCTTCTTTATCATCTTCATAACACCCCAGGCAAGAAGTGGCCTCTCACTCAAATTCCTGTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR TCA 72 bp | ATGTATGGCTCGTGGAGATGCAAACAGGAATTTGAGTaGGAGGCCACTTCTTGCCTGGGGTGTTATGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: MYGSWRCKQEFE*EATSCLGCYED Trigger: ATCTTCATAACACCCCAGGCAAGAAGTGGCCTCTCACTCAAATTCCTGTTTGCATCTCCACGAGCCATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR CCA 72 bp | TGGAAGATGGCTTGCTCAGGACCAACAGACAGACTCTaGGCATCTGAAAGGCCTTTAAGGATAAAAGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: WKMACSGPTDRL*ASERPLRIKVS Trigger: GCTTACTTTTATCCTTAAAGGCCTTTCAGATGCCCAGAGTCTGTCTGTTGGTCCTGAGCAAGCCATCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR GCA 72 bp | TCTGAAAGGCCTTTAAGGATAAAAGTAAGCAGAGCATaGCTCATGCTACCTCTGTTGCCAAGAGATCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SERPLRIKVSRA*LMLPLLPRDPF Trigger: GAAGGGATCTCTTGGCAACAGAGGTAGCATGAGGCATGCTCTGCTTACTTTTATCCTTAAAGGCCTTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | GAAAGAGACACTGTGAGGGCCAGGCCATGGCAGTCAGAAGGCCACGTGGACCCAGTCAGGGCCACCACCTaGGTGGCCAGGATACCGTGC | + |
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Preference number: 4 (lower is better) Translates to: ERDTVRARPWQSEGHVDPVRATT*VARIPC Trigger: GCACGGTATCCTGGCCACCCAGGTGGTGGCCCTGAC...TGGGTCCACGTGGCCTTCTGACTGCCATGGCCTGGCCCTCACAGTGTCTCTTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAGACACTGTGAGGGCCAGGCCATGGCAGTCAGAAGGCCACGTGGACCCAGACAGGGCCAGGCCATaGTTGTCCAGCTGTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ERDTVRARPWQSEGHVDPDRARP*LSSCGC Trigger: GCACCCACAGCTGGACAAGCATGGCCTGGCCCTGTC...TGGGTCCACGTGGCCTTCTGACTGCCATGGCCTGGCCCTCACAGTGTCTCTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | GCCACGTGGACCCATCTGGAAGATGGCTTGCTCAGGACCAACAGACAGACTCTGCCAGCAGGGCCTCCTTaGTCTTCTCCCTGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: ATWTHLEDGLLRTNRQTLPAGPP*SSPWGW Trigger: CCATCCCCAGGGAGAAGACCAAGGAGGCCCTGCTGG...CAGAGTCTGTCTGTTGGTCCTGAGCAAGCCATCTTCCAGATGGGTCCACGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR GCA 90 bp | GAAACCAAGACCCAGGGAAACCCAGGGACACGGCGAGATCCCAGCCCAAAGAATTTCACTTTCTTGTTCTaGTGCCGGGCCAGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ETKTQGNPGTRRDPSPKNFTFLF*CRARAS Trigger: GCTGGCCCTGGCCCGGCAGCAGAACAAGAAAGTGAA...ATTCTTTGGGCTGGGATCTCGCCGTGTCCCTGGGTTTCCCTGGGTCTTGGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | AGATCCCTTCTGAAGAGGGAGGGAAAACTGCAGGCCCCAGGGATCTCTCTATACGGTGGGCCTCCAGCATaGCCTTTAGCTCCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RSLLKREGKLQAPGISLYGGPPA*PLAPAG Trigger: CCCTGCTGGAGCTAAAGGCCATGCTGGAGGCCCACC...GTATAGAGAGATCCCTGGGGCCTGCAGTTTTCCCTCCCTCTTCAGAAGGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR TCA 90 bp | GAAACCAAGACCCAGGGAAACCCAGGGACACGGCGAGATCCCAGCCCAAAGAATTCTGACCTCCCCCACTaGTGTGGGCTGGTAGTACAT | + |
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Preference number: 4 (lower is better) Translates to: ETKTQGNPGTRRDPSPKNSDLPH*CGLVVH Trigger: ATGTACTACCAGCCCACATCAGTGGGGGAGGTCAGA...ATTCTTTGGGCTGGGATCTCGCCGTGTCCCTGGGTTTCCCTGGGTCTTGGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR TCA 90 bp | TCATGCTACCTCTGTTGCCAAGAGATCCCTTCTGAAGAGGGAGGGAAAACTGCAGGGCCAGCACCTCTCTaGCCTCCCCCACTGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: SCYLCCQEIPSEEGGKTAGPAPL*PPPLMW Trigger: CCACATCAGTGGGGGAGGTCAGAGAGGTGCTGGCCC...TGCAGTTTTCCCTCCCTCTTCAGAAGGGATCTCTTGGCAACAGAGGTAGCATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | CCTCATGCTACCTCTGTTGCCAAGAGATCCCTTCTGAAGAGGGAGGGAAAACTGAGTGGGCTACCACCTTaGGGTGGGCCTCCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: PHATSVAKRSLLKREGKLSGLPP*GGPPAW Trigger: CCATGCTGGAGGCCCACCCCAAGGTGGTAGCCCACT...CAGTTTTCCCTCCCTCTTCAGAAGGGATCTCTTGGCAACAGAGGTAGCATGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | GACCCATCTGGAAGATGGCTTGCTCAGGACCAACAGACAGACTCTGGGCATCTGTTCCTGGTGCAATTGTaGGCCTTTGCCCAGTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: DPSGRWLAQDQQTDSGHLFLVQL*AFAQWG Trigger: GCCCCACTGGGCAAAGGCCCACAATTGCACCAGGAA...CAGATGCCCAGAGTCTGTCTGTTGGTCCTGAGCAAGCCATCTTCCAGATGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR TCA 90 bp | GCCACGTGGACCCATCTGGAAGATGGCTTGCTCAGGACCAACAGACAGACTCTGTACCGGCTTCCACTGTaGCCTGCTTCTTCTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: ATWTHLEDGLLRTNRQTLYRLPL*PASSPC Trigger: ACAAGGAGAAGAAGCAGGTCACAGTGGAAGCCGGTA...CAGAGTCTGTCTGTTGGTCCTGAGCAAGCCATCTTCCAGATGGGTCCACGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR GCA 90 bp | GAAACCAAGACCCAGGGAAACCCAGGGACACGGCGAGATCCCAGCCCAAAGAATCAAAGTCCTTCCTGGTaGAATTGTGGGCCTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ETKTQGNPGTRRDPSPKNQSPSW*NCGPLP Trigger: GGGCAAAGGCCCACAATTGCACCAGGAAGGACTTTG...ATTCTTTGGGCTGGGATCTCGCCGTGTCCCTGGGTTTCCCTGGGTCTTGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR GCA 90 bp | TCATGCTACCTCTGTTGCCAAGAGATCCCTTCTGAAGAGGGAGGGAAAACTGCAGCCCAGGTGCACCCTTaGAGCCTGGAACACATCTGC | + |
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Preference number: 4 (lower is better) Translates to: SCYLCCQEIPSEEGGKTAAQVHP*SLEHIC Trigger: GCAGATGTGTTCCAGGCTGCAAGGGTGCACCTGGGC...TGCAGTTTTCCCTCCCTCTTCAGAAGGGATCTCTTGGCAACAGAGGTAGCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR TCA 90 bp | TCTTGCCTGGGGTGTTATGAAGATGATAAAGAAGGCAGAGGCCTCGGCCAGAGCCTCCAAACTTCTTCATaGTGGTCTCATAGGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SCLGCYEDDKEGRGLGQSLQTSS*WSHRPA Trigger: GGCTGGCCTATGAGACCATCATGAAGAAGTTTGGAG...GCTCTGGCCGAGGCCTCTGCCTTCTTTATCATCTTCATAACACCCCAGGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR GCA 90 bp | TCTTGCCTGGGGTGTTATGAAGATGATAAAGAAGGCAGAGGCCTCGGCCAGAGCAACTGTGGCACACACTaGAGGGTGACAGTGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: SCLGCYEDDKEGRGLGQSNCGTH*RVTVRI Trigger: TATCCTCACTGTCACCCTGCAGTGTGTGCCACAGTT...GCTCTGGCCGAGGCCTCTGCCTTCTTTATCATCTTCATAACACCCCAGGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | TCATGCTACCTCTGTTGCCAAGAGATCCCTTCTGAAGAGGGAGGGAAAACTGCAATGCTTGTCCAGCTGTaGGTGCAGGTCAGTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SCYLCCQEIPSEEGGKTAMLVQL*VQVSQE Trigger: CTCCTGACTGACCTGCACCCACAGCTGGACAAGCAT...TGCAGTTTTCCCTCCCTCTTCAGAAGGGATCTCTTGGCAACAGAGGTAGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR TCA 90 bp | GGGAAAACTGCAGGCCCCAGGGATCTCTCTATACTTGGTGGACCAGTAGAACCTTCTCCTTCTTGCAGTTaGACAGCAGCCAGAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GKTAGPRDLSILGGPVEPSPSCS*TAARRR Trigger: TCTTCTTCTGGCTGCTGTTCAACTGCAAGAAGGAGA...AGGTTCTACTGGTCCACCAAGTATAGAGAGATCCCTGGGGCCTGCAGTTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR GCA 90 bp | AAAGTACCTGGAACATATTGGCTCTCCAAGGAACATTCCAGAAAGGCCACAAATGCAATTGTGGGCCTTTaGCCAGTGGGGCCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KVPGTYWLSKEHSRKATNAIVGL*PVGPAS Trigger: GGAGGCAGGCCCCACTGGGCAAAGGCCCACAATTGC...ATTTGTGGCCTTTCTGGAATGTTCCTTGGAGAGCCAATATGTTCCAGGTACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR TCA 90 bp | GGGAAAACTGCAGGCCCCAGGGATCTCTCTATACTTGGTGGACCAGTAGAACCTATGTCACAGAACTTGTaGAAGGCGGGGTACATTTTC | + |
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Preference number: 4 (lower is better) Translates to: GKTAGPRDLSILGGPVEPMSQNL*KAGYIF Trigger: GAAAATGTACCCCGCCTTTCACAAGTTCTGTGACAT...AGGTTCTACTGGTCCACCAAGTATAGAGAGATCCCTGGGGCCTGCAGTTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | GACAAAGTACCTGGAACATATTGGCTCTCCAAGGAACATTCCAGAAAGGCCACAGGGATGGCCCAGTCTTaGACATGCTGCTTGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: DKVPGTYWLSKEHSRKATGMAQS*TCCLKR Trigger: TCGCTTCAAGCAGCATGTCCAAGACTGGGCCATCCC...TGTGGCCTTTCTGGAATGTTCCTTGGAGAGCCAATATGTTCCAGGTACTTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR GCA 90 bp | AAGGCCTTTAAGGATAAAAGTAAGCAGAGCATGCCTCATGCTACCTCTGTTGCCTTGTCCAGCTGTGGGTaGAGGTCAGTCAGGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: KAFKDKSKQSMPHATSVALSSCG*RSVRRI Trigger: TATCCTCCTGACTGACCTGCACCCACAGCTGGACAA...GGCAACAGAGGTAGCATGAGGCATGCTCTGCTTACTTTTATCCTTAAAGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | CAGAGTCTTTTAATTCTGACAAAGTACCTGGAACATATTGGCTCTCCAAGGAACGCTACCACCTTGGGGTaGGCCTCCAGCATGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: QSLLILTKYLEHIGSPRNATTLG*ASSMAF Trigger: AAAGGCCATGCTGGAGGCCCACCCCAAGGTGGTAGC...GTTCCTTGGAGAGCCAATATGTTCCAGGTACTTTGTCAGAATTAAAAGACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR TCA 90 bp | TTTAAGGATAAAAGTAAGCAGAGCATGCCTCATGCTACCTCTGTTGCCAAGAGACTGACGTTCTCACTGTaGGGAAACCAGAGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: FKDKSKQSMPHATSVAKRLTFSL*GNQRKR Trigger: CCGCTTCCTCTGGTTTCCTCACAGTGAGAACGTCAG...TCTCTTGGCAACAGAGGTAGCATGAGGCATGCTCTGCTTACTTTTATCCTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | GACAAAGTACCTGGAACATATTGGCTCTCCAAGGAACATTCCAGAAAGGCCACAGTCTTCGCCCAGTTTTaGAACTGGACCCCTTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: DKVPGTYWLSKEHSRKATVFAQF*NWTPLY Trigger: GTACAAAGGGGTCCAGTTCCAAAACTGGGCGAAGAC...TGTGGCCTTTCTGGAATGTTCCTTGGAGAGCCAATATGTTCCAGGTACTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | TTTAAGGATAAAAGTAAGCAGAGCATGCCTCATGCTACCTCTGTTGCCAAGAGACAGAAGGTGGAACTGTaGCACACACTGCAGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: FKDKSKQSMPHATSVAKRQKVEL*HTLQGD Trigger: GTCACCCTGCAGTGTGTGCCACAGTTCCACCTTCTG...TCTCTTGGCAACAGAGGTAGCATGAGGCATGCTCTGCTTACTTTTATCCTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | TTTAAGGATAAAAGTAAGCAGAGCATGCCTCATGCTACCTCTGTTGCCAAGAGAGATGTCTCCAGAAGGTaGAACTGTGGCACACACTGC | + |
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Preference number: 4 (lower is better) Translates to: FKDKSKQSMPHATSVAKRDVSRR*NCGTHC Trigger: GCAGTGTGTGCCACAGTTCCACCTTCTGGAGACATC...TCTCTTGGCAACAGAGGTAGCATGAGGCATGCTCTGCTTACTTTTATCCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| 3UTR CAA 72 bp | AGTTTATGTATGGCTCGTGGAGATGCAAACAGGAATTaGAGTGAGAGGCCACTTCTTGCCTGGGGTGTTATG | + |
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Preference number: 4 (lower is better) Translates to: SLCMARGDANRN*SERPLLAWGVM Trigger: CATAACACCCCAGGCAAGAAGTGGCCTCTCACTCAAATTCCTGTTTGCATCTCCACGAGCCATACATAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR GCA 90 bp | TATCTTTCAGAGTCTTTTAATTCTGACAAAGTACCTGGAACATATTGGCTCTCCGCTTCCACTGTGACCTaGTTCTTCTCCTTGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: YLSESFNSDKVPGTYWLSASTVT*FFSLST Trigger: GGTGGACAAGGAGAAGAAGCAGGTCACAGTGGAAGC...GGAGAGCCAATATGTTCCAGGTACTTTGTCAGAATTAAAAGACTCTGAAAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CCA 90 bp | TATCTTTCAGAGTCTTTTAATTCTGACAAAGTACCTGGAACATATTGGCTCTCCTGCACCCTTGCAGCCTaGAACACATCTGCATTACTT | + |
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Preference number: 4 (lower is better) Translates to: YLSESFNSDKVPGTYWLSCTLAA*NTSALL Trigger: AAGTAATGCAGATGTGTTCCAGGCTGCAAGGGTGCA...GGAGAGCCAATATGTTCCAGGTACTTTGTCAGAATTAAAAGACTCTGAAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS TCA 90 bp | TGTCCCTCTGGAAGCACGGGCTCAGCAGGATGTCATCACCTCGGGTaGAGCGCACCTCCACGGGGTAGTGGGCTACCACCTTGGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: CPSGSTGSAGCHHLG*SAPPRGSGLPPWGG Trigger: CCCACCCCAAGGTGGTAGCCCACTACCCCGTGGAGGTGCGCTTCACCCGAGGTGATGACATCCTGCTGAGCCCGTGCTTCCAGAGGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 90 bp | TCTGAAGGCGAGTGGCCGCCACCCACCACCTTCACTTTCTTGTTCTaGTGCCGGGCCAGGGCCAGCACCTCTCTGACCTCCCCCACTGAT | + |
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Preference number: 5 (lower is better) Translates to: SEGEWPPPTTFTFLF*CRARASTSLTSPTD Trigger: ATCAGTGGGGGAGGTCAGAGAGGTGCTGGCCCTGGCCCGGCAGCAGAACAAGAAAGTGAAGGTGGTGGGTGGCGGCCACTCGCCTTCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CCA 90 bp | CACGGCTCCCAGATTAGACAGGGCCAGGCCATGCTTGTCCAGCTGTaGGTGCAGGTCAGTCAGGAGGATACCGGCTTCCACTGTGACCTG | + |
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Preference number: 5 (lower is better) Translates to: HGSQIRQGQAMLVQL*VQVSQEDTGFHCDL Trigger: CAGGTCACAGTGGAAGCCGGTATCCTCCTGACTGACCTGCACCCACAGCTGGACAAGCATGGCCTGGCCCTGTCTAATCTGGGAGCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 90 bp | GCTCCCAGATTAGACAGGGCCAGGCCATGCTTGTCCAGCTGTGGGTaGAGGTCAGTCAGGAGGATACCGGCTTCCACTGTGACCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: APRLDRARPCLSSCG*RSVRRIPASTVTCF Trigger: GAAGCAGGTCACAGTGGAAGCCGGTATCCTCCTGACTGACCTGCACCCACAGCTGGACAAGCATGGCCTGGCCCTGTCTAATCTGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 90 bp | ACCGTCACATCAGACACGGCTCCCAGATTAGACAGGGCCAGGCCATaGTTGTCCAGCTGTGGGTGCAGGTCAGTCAGGAGGATACCGGCT | + |
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Preference number: 5 (lower is better) Translates to: TVTSDTAPRLDRARP*LSSCGCRSVRRIPA Trigger: AGCCGGTATCCTCCTGACTGACCTGCACCCACAGCTGGACAAGCATGGCCTGGCCCTGTCTAATCTGGGAGCCGTGTCTGATGTGACGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 90 bp | GCCTTCATCAGGGTCAGGGCCACCACCTGGGTGGCCAGGATACCGTaGTTGATCCCGGTGTTATGTGTTCCAGACCCAATGACGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: AFIRVRATTWVARIP*LIPVLCVPDPMTPP Trigger: TGGTGGCGTCATTGGGTCTGGAACACATAACACCGGGATCAAGCACGGTATCCTGGCCACCCAGGTGGTGGCCCTGACCCTGATGAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CAA 90 bp | GAAACCAAGACCCAGGGAAACCCAGGGACACGGCGAGATCCCAGCCCAAAGAATGGGGATGGCCCAGTCTaGGACATGCTGCTTGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: ETKTQGNPGTRRDPSPKNGDGPV*DMLLEA Trigger: CGCTTCAAGCAGCATGTCCAAGACTGGGCCATCCCC...ATTCTTTGGGCTGGGATCTCGCCGTGTCCCTGGGTTTCCCTGGGTCTTGGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 90 bp | TGTGGGTGCAGGTCAGTCAGGAGGATACCGGCTTCCACTGTGACCTaGTTCTTCTCCTTGTCCACCTGGAGAACCCGGTTCATCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: CGCRSVRRIPASTVT*FFSLSTWRTRFILP Trigger: GGGCAAGATGAACCGGGTTCTCCAGGTGGACAAGGAGAAGAAGCAGGTCACAGTGGAAGCCGGTATCCTCCTGACTGACCTGCACCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 90 bp | GTCGAAGGAAAGGATGTCTCCAGAAGGTGGAACTGTGGCACACACTaGAGGGTGACAGTGAGGATAACACCCAGGCAGCCCAGGTGCACC | + |
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Preference number: 5 (lower is better) Translates to: VEGKDVSRRWNCGTH*RVTVRITPRQPRCT Trigger: GGTGCACCTGGGCTGCCTGGGTGTTATCCTCACTGTCACCCTGCAGTGTGTGCCACAGTTCCACCTTCTGGAGACATCCTTTCCTTCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CCA 90 bp | GAACAGCAGCCAGAAGAAGAAGCGGTTGATCCAGCCCACGAGGCGTaGCAGGTAGGTGCTGGTCCAGAGCAAGAATTCCAGGAGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: EQQPEEEAVDPAHEA*QVGAGPEQEFQEVE Trigger: TTCTACCTCCTGGAATTCTTGCTCTGGACCAGCACCTACCTGCCACGCCTCGTGGGCTGGATCAACCGCTTCTTCTTCTGGCTGCTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS TCA 90 bp | CATCTTGCCCATGTGAATCATGAAGCCATCGGTGCAGGCGATGTCTaGAGGCGAGTGGCCGCCACCCACCACCTTCACTTTCTTGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: HLAHVNHEAIGAGDV*RRVAATHHLHFLVL Trigger: CAGAACAAGAAAGTGAAGGTGGTGGGTGGCGGCCACTCGCCTTCAGACATCGCCTGCACCGATGGCTTCATGATTCACATGGGCAAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CAA 90 bp | TCATGCTACCTCTGTTGCCAAGAGATCCCTTCTGAAGAGGGAGGGAAAACTGCATGCAATTGTGGGCCTTaGCCCAGTGGGGCCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SCYLCCQEIPSEEGGKTACNCGP*PSGACL Trigger: GAGGCAGGCCCCACTGGGCAAAGGCCCACAATTGCA...TGCAGTTTTCCCTCCCTCTTCAGAAGGGATCTCTTGGCAACAGAGGTAGCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS TCA 90 bp | ACTCAGACTTCTTCAGGTGGCTGTCCAGGTTGTCAAGGACCTCCTTaGGGGTCGAAGGAAAGGATGTCTCCAGAAGGTGGAACTGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: TQTSSGGCPGCQGPP*GSKERMSPEGGTVA Trigger: TGCCACAGTTCCACCTTCTGGAGACATCCTTTCCTTCGACCCTCAAGGAGGTCCTTGACAACCTGGACAGCCACCTGAAGAAGTCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS TCA 90 bp | GCAGCCCAGGTGCACCCTTGCAGCCTGGAACACATCTGCATTACTTaGCTCAGAACATTCCAGAACTGTTCCATCAGCCTTCATCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: AAQVHPCSLEHICIT*LRTFQNCSISLHQG Trigger: ACCCTGATGAAGGCTGATGGAACAGTTCTGGAATGTTCTGAGTCAAGTAATGCAGATGTGTTCCAGGCTGCAAGGGTGCACCTGGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CAA 90 bp | GAGGCCACTTCTTGCCTGGGGTGTTATGAAGATGATAAAGAAGGCAGAGGCCTCGCCAGGATACCGTGCTaGATCCCGGTGTTATGTGTT | + |
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Preference number: 5 (lower is better) Translates to: EATSCLGCYEDDKEGRGLARIPC*IPVLCV Trigger: AACACATAACACCGGGATCAAGCACGGTATCCTGGC...GAGGCCTCTGCCTTCTTTATCATCTTCATAACACCCCAGGCAAGAAGTGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CAA 90 bp | GGGAAAACTGCAGGCCCCAGGGATCTCTCTATACTTGGTGGACCAGTAGAACCTCTCTCCTTCTTGCAGTaGAACAGCAGCCAGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GKTAGPRDLSILGGPVEPLSFLQ*NSSQKK Trigger: CTTCTTCTGGCTGCTGTTCAACTGCAAGAAGGAGAG...AGGTTCTACTGGTCCACCAAGTATAGAGAGATCCCTGGGGCCTGCAGTTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CAA 90 bp | CAGAGTCTTTTAATTCTGACAAAGTACCTGGAACATATTGGCTCTCCAAGGAACAGGGCCAGGCCATGCTaGTCCAGCTGTGGGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: QSLLILTKYLEHIGSPRNRARPC*SSCGCR Trigger: CCTGCACCCACAGCTGGACAAGCATGGCCTGGCCCT...GTTCCTTGGAGAGCCAATATGTTCCAGGTACTTTGTCAGAATTAAAAGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CAA 90 bp | AAAGTACCTGGAACATATTGGCTCTCCAAGGAACATTCCAGAAAGGCCACAAATAGCCCAGGTGCACCCTaGCAGCCTGGAACACATCTG | + |
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Preference number: 5 (lower is better) Translates to: KVPGTYWLSKEHSRKATNSPGAP*QPGTHL Trigger: CAGATGTGTTCCAGGCTGCAAGGGTGCACCTGGGCT...ATTTGTGGCCTTTCTGGAATGTTCCTTGGAGAGCCAATATGTTCCAGGTACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CAA 90 bp | AGACTCTGGGCATCTGAAAGGCCTTTAAGGATAAAAGTAAGCAGAGCATGCCTCATCTTGTGGCTGAGGTaGCTGCTCTCCTTCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RLWASERPLRIKVSRACLILWLR*LLSFLQ Trigger: CTGCAAGAAGGAGAGCAGCAACCTCAGCCACAAGAT...GAGGCATGCTCTGCTTACTTTTATCCTTAAAGGCCTTTCAGATGCCCAGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS-3UTR CAA 90 bp | TCTTGCCTGGGGTGTTATGAAGATGATAAAGAAGGCAGAGGCCTCGGCCAGAGCACACATCTGCATTACTaGACTCAGAACATTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SCLGCYEDDKEGRGLGQSTHLHY*TQNIPE Trigger: TTCTGGAATGTTCTGAGTCAAGTAATGCAGATGTGT...GCTCTGGCCGAGGCCTCTGCCTTCTTTATCATCTTCATAACACCCCAGGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 72 bp | TGGCCGCCACCCACCACCTTCACTTTCTTGTTCTGCTaGCGGGCCAGGGCCAGCACCTCTCTGACCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: WPPPTTFTFLFC*RARASTSLTSP Trigger: GGGGGAGGTCAGAGAGGTGCTGGCCCTGGCCCGGCAGCAGAACAAGAAAGTGAAGGTGGTGGGTGGCGGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CAA 90 bp | GCGATGTCTGAAGGCGAGTGGCCGCCACCCACCACCTTCACTTTCTaGTTCTGCTGCCGGGCCAGGGCCAGCACCTCTCTGACCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: AMSEGEWPPPTTFTF*FCCRARASTSLTSP Trigger: GGGGGAGGTCAGAGAGGTGCTGGCCCTGGCCCGGCAGCAGAACAAGAAAGTGAAGGTGGTGGGTGGCGGCCACTCGCCTTCAGACATCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS TCA 72 bp | GGAAGCACGGGCTCAGCAGGATGTCATCACCTCGGGTaGAGCGCACCTCCACGGGGTAGTGGGCTACCACCT | + |
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Preference number: 6 (lower is better) Translates to: GSTGSAGCHHLG*SAPPRGSGLPP Trigger: AGGTGGTAGCCCACTACCCCGTGGAGGTGCGCTTCACCCGAGGTGATGACATCCTGCTGAGCCCGTGCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 72 bp | TCAGACACGGCTCCCAGATTAGACAGGGCCAGGCCATaGTTGTCCAGCTGTGGGTGCAGGTCAGTCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SDTAPRLDRARP*LSSCGCRSVRR Trigger: CCTCCTGACTGACCTGCACCCACAGCTGGACAAGCATGGCCTGGCCCTGTCTAATCTGGGAGCCGTGTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CAA 90 bp | GTCACATCAGACACGGCTCCCAGATTAGACAGGGCCAGGCCATGCTaGTCCAGCTGTGGGTGCAGGTCAGTCAGGAGGATACCGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VTSDTAPRLDRARPC*SSCGCRSVRRIPAS Trigger: GGAAGCCGGTATCCTCCTGACTGACCTGCACCCACAGCTGGACAAGCATGGCCTGGCCCTGTCTAATCTGGGAGCCGTGTCTGATGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 72 bp | TTAGACAGGGCCAGGCCATGCTTGTCCAGCTGTGGGTaGAGGTCAGTCAGGAGGATACCGGCTTCCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: LDRARPCLSSCG*RSVRRIPASTV Trigger: CACAGTGGAAGCCGGTATCCTCCTGACTGACCTGCACCCACAGCTGGACAAGCATGGCCTGGCCCTGTCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CAA 90 bp | TTCATCAGGGTCAGGGCCACCACCTGGGTGGCCAGGATACCGTGCTaGATCCCGGTGTTATGTGTTCCAGACCCAATGACGCCACCAACC | + |
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Preference number: 6 (lower is better) Translates to: FIRVRATTWVARIPC*IPVLCVPDPMTPPT Trigger: GGTTGGTGGCGTCATTGGGTCTGGAACACATAACACCGGGATCAAGCACGGTATCCTGGCCACCCAGGTGGTGGCCCTGACCCTGATGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CCA 72 bp | ATGAAGCCATCGGTGCAGGCGATGTCTGAAGGCGAGTaGCCGCCACCCACCACCTTCACTTTCTTGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: MKPSVQAMSEGE*PPPTTFTFLFC Trigger: GCAGAACAAGAAAGTGAAGGTGGTGGGTGGCGGCCACTCGCCTTCAGACATCGCCTGCACCGATGGCTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CCA 72 bp | CCAGAAGAAGAAGCGGTTGATCCAGCCCACGAGGCGTaGCAGGTAGGTGCTGGTCCAGAGCAAGAATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PEEEAVDPAHEA*QVGAGPEQEFQ Trigger: CTGGAATTCTTGCTCTGGACCAGCACCTACCTGCCACGCCTCGTGGGCTGGATCAACCGCTTCTTCTTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CAA 72 bp | GGCCTCCTTGGTCTTCTCCCTGGGGATGGCCCAGTCTaGGACATGCTGCTTGAAGCGACACTCGTAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GLLGLLPGDGPV*DMLLEATLVGE Trigger: TTCTCCTACGAGTGTCGCTTCAAGCAGCATGTCCAAGACTGGGCCATCCCCAGGGAGAAGACCAAGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS TCA 72 bp | CATGTGAATCATGAAGCCATCGGTGCAGGCGATGTCTaGAGGCGAGTGGCCGCCACCCACCACCTTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: HVNHEAIGAGDV*RRVAATHHLHF Trigger: AAAGTGAAGGTGGTGGGTGGCGGCCACTCGCCTTCAGACATCGCCTGCACCGATGGCTTCATGATTCACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 72 bp | AGGTCAGTCAGGAGGATACCGGCTTCCACTGTGACCTaGTTCTTCTCCTTGTCCACCTGGAGAACCCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RSVRRIPASTVT*FFSLSTWRTRF Trigger: GAACCGGGTTCTCCAGGTGGACAAGGAGAAGAAGCAGGTCACAGTGGAAGCCGGTATCCTCCTGACTGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS GCA 72 bp | AAGGATGTCTCCAGAAGGTGGAACTGTGGCACACACTaGAGGGTGACAGTGAGGATAACACCCAGGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: KDVSRRWNCGTH*RVTVRITPRQP Trigger: GGGCTGCCTGGGTGTTATCCTCACTGTCACCCTGCAGTGTGTGCCACAGTTCCACCTTCTGGAGACATCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS TCA 72 bp | CCTTTGCCCAGTGGGGCCTGCCTCCAAACTTCTTCATaGTGGTCTCATAGGCCAGCCAGTAATCCAACCGAG | + |
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Preference number: 6 (lower is better) Translates to: PLPSGACLQTSS*WSHRPASNPTE Trigger: CTCGGTTGGATTACTGGCTGGCCTATGAGACCATCATGAAGAAGTTTGGAGGCAGGCCCCACTGGGCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CCA 72 bp | TCCTTGAGGGTCGAAGGAAAGGATGTCTCCAGAAGGTaGAACTGTGGCACACACTGCAGGGTGACAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SLRVEGKDVSRR*NCGTHCRVTVR Trigger: CCTCACTGTCACCCTGCAGTGTGTGCCACAGTTCCACCTTCTGGAGACATCCTTTCCTTCGACCCTCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CCA 72 bp | AACCAGAGGAAGCGGAAGTACTCAGACTTCTTCAGGTaGCTGTCCAGGTTGTCAAGGACCTCCTTGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NQRKRKYSDFFR*LSRLSRTSLRV Trigger: GACCCTCAAGGAGGTCCTTGACAACCTGGACAGCCACCTGAAGAAGTCTGAGTACTTCCGCTTCCTCTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CCA 72 bp | GGGTACATTTTCTCAAAGTCCTTCCTGGTGCAATTGTaGGCCTTTGCCCAGTGGGGCCTGCCTCCAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GYIFSKSFLVQL*AFAQWGLPPNF Trigger: GAAGTTTGGAGGCAGGCCCCACTGGGCAAAGGCCCACAATTGCACCAGGAAGGACTTTGAGAAAATGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CAA 90 bp | GGCAGCCCAGGTGCACCCTTGCAGCCTGGAACACATCTGCATTACTaGACTCAGAACATTCCAGAACTGTTCCATCAGCCTTCATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPGAPLQPGTHLHY*TQNIPELFHQPSSG Trigger: CCCTGATGAAGGCTGATGGAACAGTTCTGGAATGTTCTGAGTCAAGTAATGCAGATGTGTTCCAGGCTGCAAGGGTGCACCTGGGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CAA 90 bp | TACTCAGACTTCTTCAGGTGGCTGTCCAGGTTGTCAAGGACCTCCTaGAGGGTCGAAGGAAAGGATGTCTCCAGAAGGTGGAACTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: YSDFFRWLSRLSRTS*RVEGKDVSRRWNCG Trigger: GCCACAGTTCCACCTTCTGGAGACATCCTTTCCTTCGACCCTCAAGGAGGTCCTTGACAACCTGGACAGCCACCTGAAGAAGTCTGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CCA 72 bp | ATAACACCCAGGCAGCCCAGGTGCACCCTTGCAGCCTaGAACACATCTGCATTACTTGACTCAGAACATTCC | + |
|
Preference number: 6 (lower is better) Translates to: ITPRQPRCTLAA*NTSALLDSEHS Trigger: GGAATGTTCTGAGTCAAGTAATGCAGATGTGTTCCAGGCTGCAAGGGTGCACCTGGGCTGCCTGGGTGTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CAA 72 bp | ATCTTGTGGCTGAGGTTGCTGCTCTCCTTCTTGCAGTaGAACAGCAGCCAGAAGAAGAAGCGGTTGATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ILWLRLLLSFLQ*NSSQKKKRLIQ Trigger: CTGGATCAACCGCTTCTTCTTCTGGCTGCTGTTCAACTGCAAGAAGGAGAGCAGCAACCTCAGCCACAAGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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| CDS CAA 72 bp | GGTGCACCCTTGCAGCCTGGAACACATCTGCATTACTaGACTCAGAACATTCCAGAACTGTTCCATCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GAPLQPGTHLHY*TQNIPELFHQP Trigger: AGGCTGATGGAACAGTTCTGGAATGTTCTGAGTCAAGTAATGCAGATGTGTTCCAGGCTGCAAGGGTGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059970.9 |
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