Pregenerated sensors for GUK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020444Ensembl transcript IDs: ENSMUST00000170202.9, ENSMUST00000170895.3, ENSMUST00000172714.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCAGGGAGATTAGATATGGGTACTCTTTGGAGTCATTCAGCCAGTaGGTCAGCCCACGGTGCAGAGCCACCTTGTGGTCAGACAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: SREIRYGYSLESFSQ*VSPRCRATLWSDKG Trigger: CCCTTTGTCTGACCACAAGGTGGCTCTGCACCGTGGGCTGACTCACTGGCTGAATGACTCCAAAGAGTACCCATATCTAATCTCCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| 3UTR CCA 90 bp | AGCCACCTTGTGGTCAGACAAAGGGTAGCTCCTTCTACTCCACAGTaGAAGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: SHLVVRQRVAPSTPQ*KSTTSPWCPGKVSP Trigger: GGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACTGTGGAGTAGAAGGAGCTACCCTTTGTCTGACCACAAGGTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| 3UTR CCA 90 bp | TCCTTCTACTCCACAGTGGAAGTCTACTACAAGTCCTTGGTGCCCTaGCAAAGTTTCCCCCACCTCCAGGCAAATTTAGACCACAGACAT | + |
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Preference number: 1 (lower is better) Translates to: SFYSTVEVYYKSLVP*QSFPHLQANLDHRH Trigger: ATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACTGTGGAGTAGAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| 3UTR CCA 90 bp | GAAAGGAACACAAATAGTCCAGGGAGATTAGATATGGGTACTCTTTaGAGTCATTCAGCCAGTGAGTCAGCCCACGGTGCAGAGCCACCT | + |
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Preference number: 1 (lower is better) Translates to: ERNTNSPGRLDMGTL*SHSASESAHGAEPP Trigger: AGGTGGCTCTGCACCGTGGGCTGACTCACTGGCTGAATGACTCCAAAGAGTACCCATATCTAATCTCCCTGGACTATTTGTGTTCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| 3UTR CCA 72 bp | CCTTCTACTCCACAGTGGAAGTCTACTACAAGTCCTTaGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: PSTPQWKSTTSP*CPGKVSPTSRQ Trigger: TTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACTGTGGAGTAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| 3UTR TCA 72 bp | ATTAGATATGGGTACTCTTTGGAGTCATTCAGCCAGTaGGTCAGCCCACGGTGCAGAGCCACCTTGTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: IRYGYSLESFSQ*VSPRCRATLWS Trigger: TGACCACAAGGTGGCTCTGCACCGTGGGCTGACTCACTGGCTGAATGACTCCAAAGAGTACCCATATCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| 3UTR CCA 72 bp | TCCACAGTGGAAGTCTACTACAAGTCCTTGGTGCCCTaGCAAAGTTTCCCCCACCTCCAGGCAAATTTAGAC | + |
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Preference number: 3 (lower is better) Translates to: STVEVYYKSLVP*QSFPHLQANLD Trigger: GTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACTGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | CAGTGGAAGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCCATCTAGCACGCAGATaGGGTTCATGGCCTGCACAG | + |
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Preference number: 4 (lower is better) Translates to: QWKSTTSPWCPGKVSPTSHLARR*GSWPAQ Trigger: CTGTGCAGGCCATGAACCGCATCTGCGTGCTAGATG...GGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | GGAAGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCCGCCTGCTTCAGGGTTaGATAGGCTTTATCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GSLLQVLGALAKFPPPPGRLLQG*IGFIQV Trigger: GACCTGGATAAAGCCTATGCAACCCTGAAGCAGGCG...GCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CCA 90 bp | CTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTTAGACGCAGATGCGGTTCATaGCCTGCACAGCCCGAACAG | + |
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Preference number: 4 (lower is better) Translates to: LQVLGALAKFPPPPGKFRRRCGS*PAQPEQ Trigger: CTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCG...TCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | TCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTAGCTGCCAGCCGCTTTaGCAGACTCTCCTCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: STTSPWCPGKVSPTSRQISCQPL*QTLLSL Trigger: GAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCT...AATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | TACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTTAGACAGCCAGGCTCCTTGCTaGTCTCCATGTCTGTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: YKSLVPWQSFPHLQANLDSQAPC*SPCLSV Trigger: CACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCT...GTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CCA 90 bp | CAAAGGGTAGCTCCTTCTACTCCACAGTGGAAGTCTACTACAAGTCCTTGGTGCCGCAGATGCGGTTCATaGCCTGCACAGCCCGAACAG | + |
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Preference number: 4 (lower is better) Translates to: QRVAPSTPQWKSTTSPWCRRCGS*PAQPEQ Trigger: CTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCG...GCACCAAGGACTTGTAGTAGACTTCCACTGTGGAGTAGAAGGAGCTACCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| 3UTR CAA 72 bp | TCCTTCTACTCCACAGTGGAAGTCTACTACAAGTCCTaGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SFYSTVEVYYKS*VPWQSFPHLQA Trigger: TGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACTGTGGAGTAGAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| CDS-3UTR TCA 90 bp | AGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAACCCGTACAGGTTCCCTaGGAACTCAGCATGCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SLLQVLGALAKFPPPPGKPVQVP*ELSMLN Trigger: ATTGAGCATGCTGAGTTCTCAGGGAACCTGTACGGG...TTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | GCAAAGTTTCCCCCACCTCCAGGCAAATTTAGACCACAGACATCACTCTGTGGAAGCTGCCAGCCGCTTTaGCAGACTCTCCTCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: AKFPPPPGKFRPQTSLCGSCQPL*QTLLSL Trigger: GAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCT...TCCACAGAGTGATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | TACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTTAGACCCGAAGATGCTGCTGTaGTCCTGGAACAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YKSLVPWQSFPHLQANLDPKMLL*SWNSFL Trigger: CAAGAAGCTGTTCCAGGAGCACAGCAGCATCTTCGG...GTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | TCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTCGCCTGCTTCAGGGTTaGATAGGCTTTATCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: STTSPWCPGKVSPTSRQIRLLQG*IGFIQV Trigger: GACCTGGATAAAGCCTATGCAACCCTGAAGCAGGCG...AATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR TCA 90 bp | TCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTTTCCCTGTGCTTTCTTaGTTTCCTCAGAGAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: STTSPWCPGKVSPTSRQIFPVLS*FPQRAP Trigger: AGGCGCTCTCTGAGGAAATCAAGAAAGCACAGGGAA...AATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR TCA 90 bp | TACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTTAGACTTCCCTGTGCTTTCTTaGTTTCCTCAGAGAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: YKSLVPWQSFPHLQANLDFPVLS*FPQRAP Trigger: AGGCGCTCTCTGAGGAAATCAAGAAAGCACAGGGAA...GTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | AAGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAGTGGCCAGTTCCCTGTaGTTTCTTGATTTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSTTSPWCPGKVSPTSRQVASSL*FLDFLR Trigger: TCTGAGGAAATCAAGAAAGCACAGGGAACTGGCCAC...TTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | AGTGGAAGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGTGGCCAGTTCCCTGTaGTTTCTTGATTTCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SGSLLQVLGALAKFPPPPVASSL*FLDFLR Trigger: TCTGAGGAAATCAAGAAAGCACAGGGAACTGGCCAC...TGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CCA 90 bp | CTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTTATGCTGCTGTGCTCCTaGAACAGCTTCTTGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLQVLGALAKFPPPPGKFMLLCS*NSFLSR Trigger: TCTGCTCAAGAAGCTGTTCCAGGAGCACAGCAGCAT...AAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | TTTCCCCCACCTCCAGGCAAATTTAGACCACAGACATCACTCTGTGGAATGAAGCCGAAGATGCTGCTGTaGTCCTGGAACAGCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: FPPPPGKFRPQTSLCGMKPKMLL*SWNSFL Trigger: CAAGAAGCTGTTCCAGGAGCACAGCAGCATCTTCGG...CTTCATTCCACAGAGTGATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR TCA 90 bp | AGTCCAGGGAGATTAGATATGGGTACTCTTTGGAGTCATTCAGCCAGTGAGTCACCCGTACAGGTTCCCTaGGAACTCAGCATGCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SPGRLDMGTLWSHSASESPVQVP*ELSMLN Trigger: ATTGAGCATGCTGAGTTCTCAGGGAACCTGTACGGG...TGACTCACTGGCTGAATGACTCCAAAGAGTACCCATATCTAATCTCCCTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| CDS-3UTR GCA 90 bp | CTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTTAGAAATGAAGTCCCCTGCTaGAATATCACGCTGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: LQVLGALAKFPPPPGKFRNEVPC*NITLHH Trigger: ATGATGCAGCGTGATATTGCAGCAGGGGACTTCATT...TCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | TCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTAATGAAGTCCCCTGCTaGAATATCACGCTGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: STTSPWCPGKVSPTSRQINEVPC*NITLHH Trigger: ATGATGCAGCGTGATATTGCAGCAGGGGACTTCATT...AATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR GCA 90 bp | ACAAATAGTCCAGGGAGATTAGATATGGGTACTCTTTGGAGTCATTCAGCCAGTAGCCAGGCTCCTTGCTaGTCTCCATGTCTGTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TNSPGRLDMGTLWSHSASSQAPC*SPCLSV Trigger: CACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCT...ACTGGCTGAATGACTCCAAAGAGTACCCATATCTAATCTCCCTGGACTATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| CDS-3UTR CCA 90 bp | ACAAATAGTCCAGGGAGATTAGATATGGGTACTCTTTGGAGTCATTCAGCCAGTATGCTGCTGTGCTCCTaGAACAGCTTCTTGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TNSPGRLDMGTLWSHSASMLLCS*NSFLSR Trigger: TCTGCTCAAGAAGCTGTTCCAGGAGCACAGCAGCAT...ACTGGCTGAATGACTCCAAAGAGTACCCATATCTAATCTCCCTGGACTATTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| CDS-3UTR CCA 90 bp | AGTCCAGGGAGATTAGATATGGGTACTCTTTGGAGTCATTCAGCCAGTGAGTCAGCACAAAGATGTAGATaGGACACAGATCAGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SPGRLDMGTLWSHSASESAQRCR*DTDQSS Trigger: AGAAGACTGATCTGTGTCCCATCTACATCTTTGTGC...TGACTCACTGGCTGAATGACTCCAAAGAGTACCCATATCTAATCTCCCTGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| CDS TCA 90 bp | GTGCTCCTGGAACAGCTTCTTGAGCAGAGTGCTCTTCCCTGCCCCTaGCGGCCCGCTCAGCACTACTGGCCTAGGTCCTGCCATGCCGTC | + |
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Preference number: 5 (lower is better) Translates to: VLLEQLLEQSALPCP*RPAQHYWPRSCHAV Trigger: GACGGCATGGCAGGACCTAGGCCAGTAGTGCTGAGCGGGCCGTCAGGGGCAGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| CDS GCA 90 bp | GTGCAGCTGCCAGCCGCTTTGCCAGACTCTCCTCAGTCTCAGTGTTaGGCAGTCGCAGTCGTTGCTCCAGCACGTCCAGCGAGGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: VQLPAALPDSPQSQC*AVAVVAPARPAREA Trigger: AGCCTCCCTCGCTGGACGTGCTGGAGCAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS TCA 90 bp | GTGCTCCTGGAACAGCTTCTTGAGCAGAGTGCTCTTCCCTGCCCCTaGCGGCCCGCTCAGCACTACTGGCCTAGGTCCTGCCATGCCTAC | + |
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Preference number: 5 (lower is better) Translates to: VLLEQLLEQSALPCP*RPAQHYWPRSCHAY Trigger: GTAGGCATGGCAGGACCTAGGCCAGTAGTGCTGAGCGGGCCGTCAGGGGCAGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170895.3 |
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| CDS GCA 90 bp | CTCCTTGCTGCTCTCCATGTCTGTCCGTGCAGCTGCCAGCCGCTTTaGCAGACTCTCCTCAGTCTCAGTGTTGCGCAGTCGCAGTCGTTG | + |
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Preference number: 5 (lower is better) Translates to: LLAALHVCPCSCQPL*QTLLSLSVAQSQSL Trigger: CAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 90 bp | AAACAAGCCAGGCTCCTTGCTGCTCTCCATGTCTGTCCGTGCAGCTaGCAGCCGCTTTGCCAGACTCTCCTCAGTCTCAGTGTTGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: KQARLLAALHVCPCS*QPLCQTLLSLSVAQ Trigger: CTGCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCTTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 90 bp | CAGGTCAAACAAGCCAGGCTCCTTGCTGCTCTCCATGTCTGTCCGTaGAGCTGCCAGCCGCTTTGCCAGACTCTCCTCAGTCTCAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: QVKQARLLAALHVCP*SCQPLCQTLLSLSV Trigger: AACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCTTGTTTGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CCA 90 bp | TGCGCACACCTTGTAGGTCGACATCTAGCACGCAGATGCGGTTCATaGCCTGCACAGCCCGAACAGCTTCCTTGCTTGTCCCGTACAGGT | + |
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Preference number: 5 (lower is better) Translates to: CAHLVGRHLARRCGS*PAQPEQLPCLSRTG Trigger: ACCTGTACGGGACAAGCAAGGAAGCTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCGTGCTAGATGTCGACCTACAAGGTGTGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 90 bp | ACACCTTGTAGGTCGACATCTAGCACGCAGATGCGGTTCATGGCCTaGACAGCCCGAACAGCTTCCTTGCTTGTCCCGTACAGGTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: TPCRSTSSTQMRFMA*TARTASLLVPYRFP Trigger: AGGGAACCTGTACGGGACAAGCAAGGAAGCTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCGTGCTAGATGTCGACCTACAAGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CAA 90 bp | GGAAGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCGAACAGCTTCCTTGCTaGTCCCGTACAGGTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: GSLLQVLGALAKFPPPPGEQLPC*SRTGSL Trigger: CAGGGAACCTGTACGGGACAAGCAAGGAAGCTGTTC...GCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CAA 90 bp | GGAAGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCTCCTGGAACAGCTTCTaGAGCAGAGTGCTCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: GSLLQVLGALAKFPPPPGSWNSF*SRVLFP Trigger: AGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGA...GCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CAA 90 bp | CAGTGGAAGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAACAAGCCAGGCTCCTaGCTGCTCTCCATGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: QWKSTTSPWCPGKVSPTSNKPGS*LLSMSV Trigger: GACAGACATGGAGAGCAGCAAGGAGCCTGGCTTGTT...GGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS TCA 90 bp | CTGCACAGCCCGAACAGCTTCCTTGCTTGTCCCGTACAGGTTCCCTaGGAACTCAGCATGCTCAATGAAGTCCCCTGCTGCAATATCACG | + |
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Preference number: 5 (lower is better) Translates to: LHSPNSFLACPVQVP*ELSMLNEVPCCNIT Trigger: CGTGATATTGCAGCAGGGGACTTCATTGAGCATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCAAGGAAGCTGTTCGGGCTGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CAA 90 bp | CACGGTGCAGAGCCACCTTGTGGTCAGACAAAGGGTAGCTCCTTCTACTCCACATCCTGGAACAGCTTCTaGAGCAGAGTGCTCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: HGAEPPCGQTKGSSFYSTSWNSF*SRVLFP Trigger: AGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGA...TGTGGAGTAGAAGGAGCTACCCTTTGTCTGACCACAAGGTGGCTCTGCACCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170202.9 |
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| CDS-3UTR CAA 90 bp | GTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTTAGACCACAGACATCACAACAAGCCAGGCTCCTaGCTGCTCTCCATGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: VPWQSFPHLQANLDHRHHNKPGS*LLSMSV Trigger: GACAGACATGGAGAGCAGCAAGGAGCCTGGCTTGTT...GTGATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CAA 90 bp | AGTGGAAGTCTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGCGCCTGCTTCAGGGTaGCATAGGCTTTATCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SGSLLQVLGALAKFPPPPAPASG*HRLYPG Trigger: ACCTGGATAAAGCCTATGCAACCCTGAAGCAGGCGC...TGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS TCA 90 bp | CCTTGCTTGTCCCGTACAGGTTCCCTGAGAACTCAGCATGCTCAATaGAGTCCCCTGCTGCAATATCACGCTGCATCATCTCCCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: PCLSRTGSLRTQHAQ*SPLLQYHAASSPWS Trigger: TGACCAGGGAGATGATGCAGCGTGATATTGCAGCAGGGGACTTCATTGAGCATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS TCA 90 bp | AGGGAGGCTGCACAAAGATGTAGATGGGACACAGATCAGTCTTCTTaGTGCTGCGCACACCTTGTAGGTCGACATCTAGCACGCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: REAAQRCRWDTDQSS*CCAHLVGRHLARRC Trigger: GCATCTGCGTGCTAGATGTCGACCTACAAGGTGTGCGCAGCATCAAGAAGACTGATCTGTGTCCCATCTACATCTTTGTGCAGCCTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 90 bp | ACAGCTTCCTTGCTTGTCCCGTACAGGTTCCCTGAGAACTCAGCATaGTCAATGAAGTCCCCTGCTGCAATATCACGCTGCATCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: TASLLVPYRFPENSA*SMKSPAAISRCIIS Trigger: GGAGATGATGCAGCGTGATATTGCAGCAGGGGACTTCATTGAGCATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCAAGGAAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CAA 90 bp | CCCCCACCTCCAGGCAAATTTAGACCACAGACATCACTCTGTGGAATGAAGCAGTCCTGCCATGCCTACTaGATGTGTTGCAGCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: PPPPGKFRPQTSLCGMKQSCHAY*MCCSLH Trigger: ATGGAGGCTGCAACACATCAAGTAGGCATGGCAGGA...CTGCTTCATTCCACAGAGTGATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170895.3 |
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| CDS-3UTR CAA 90 bp | GCAAAGTTTCCCCCACCTCCAGGCAAATTTAGACCACAGACATCACTCTGTGGAGAACAGCTTCCTTGCTaGTCCCGTACAGGTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: AKFPPPPGKFRPQTSLCGEQLPC*SRTGSL Trigger: CAGGGAACCTGTACGGGACAAGCAAGGAAGCTGTTC...TCCACAGAGTGATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CAA 90 bp | CTACTACAAGTCCTTGGTGCCCTGGCAAAGTTTCCCCCACCTCCAGGCAAATTTGTTCCCTGTGCTTTCTaGATTTCCTCAGAGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: LLQVLGALAKFPPPPGKFVPCAF*ISSESA Trigger: GGCGCTCTCTGAGGAAATCAAGAAAGCACAGGGAAC...AAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS-3UTR CAA 90 bp | GCAAAGTTTCCCCCACCTCCAGGCAAATTTAGACCACAGACATCACTCTGTGGAGTTCCCTGTGCTTTCTaGATTTCCTCAGAGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: AKFPPPPGKFRPQTSLCGVPCAF*ISSESA Trigger: GGCGCTCTCTGAGGAAATCAAGAAAGCACAGGGAAC...TCCACAGAGTGATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 90 bp | TCCCTGTGCTTTCTTGATTTCCTCAGAGAGCGCCTGCTTCAGGGTTaGATAGGCTTTATCCAGGTCGTCATTGATGATCACCAGGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: SLCFLDFLRERLLQG*IGFIQVVIDDHQVK Trigger: TTTGACCTGGTGATCATCAATGACGACCTGGATAAAGCCTATGCAACCCTGAAGCAGGCGCTCTCTGAGGAAATCAAGAAAGCACAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CCA 90 bp | CCTGGTCACAAAGTAGTAATCTTTGCCATCTTCTTCACCAGGTCGTaGGTTCCTTGTAGTATGAGACACGCTGAAGCCGAAGATGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PGHKVVIFAIFFTRS*VPCSMRHAEAEDAA Trigger: AGCAGCATCTTCGGCTTCAGCGTGTCTCATACTACAAGGAACCCACGACCTGGTGAAGAAGATGGCAAAGATTACTACTTTGTGACCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CAA 90 bp | CGTGCAGCTGCCAGCCGCTTTGCCAGACTCTCCTCAGTCTCAGTGTaGCGCAGTCGCAGTCGTTGCTCCAGCACGTCCAGCGAGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RAAASRFARLSSVSV*RSRSRCSSTSSEGG Trigger: GCCTCCCTCGCTGGACGTGCTGGAGCAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS TCA 72 bp | GAACAGCTTCTTGAGCAGAGTGCTCTTCCCTGCCCCTaGCGGCCCGCTCAGCACTACTGGCCTAGGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: EQLLEQSALPCP*RPAQHYWPRSC Trigger: GCAGGACCTAGGCCAGTAGTGCTGAGCGGGCCGTCAGGGGCAGGGAAGAGCACTCTGCTCAAGAAGCTGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 ENSMUST00000172714.2 |
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| CDS TCA 72 bp | AGCCGAAGATGCTGCTGTGCTCCTGGAACAGCTTCTTaGGCAGAGTGCTCTTCCCTGCCCCTGACGGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: SRRCCCAPGTAS*AECSSLPLTAR Trigger: GCGGGCCGTCAGGGGCAGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGAGCACAGCAGCATCTTCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CAA 72 bp | GCCAGCCGCTTTGCCAGACTCTCCTCAGTCTCAGTGTaGCGCAGTCGCAGTCGTTGCTCCAGCACGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASRFARLSSVSV*RSRSRCSSTSS Trigger: GCTGGACGTGCTGGAGCAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CAA 90 bp | GACACGCTGAAGCCGAAGATGCTGCTGTGCTCCTGGAACAGCTTCTaGAGCAGAGTGCTCTTCCCTGCCCCTGACGGCCCGCTCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: DTLKPKMLLCSWNSF*SRVLFPAPDGPLST Trigger: AGTGCTGAGCGGGCCGTCAGGGGCAGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGAGCACAGCAGCATCTTCGGCTTCAGCGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 72 bp | CTCTCCTCAGTCTCAGTGTTGCGCAGTCGCAGTCGTTaGTCCAGCACGTCCAGCGAGGGAGGCTGCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSSVSVLRSRSR*SSTSSEGGCTK Trigger: CTTTGTGCAGCCTCCCTCGCTGGACGTGCTGGAGCAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 72 bp | GCTCTCCATGTCTGTCCGTGCAGCTGCCAGCCGCTTTaGCAGACTCTCCTCAGTCTCAGTGTTGCGCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: ALHVCPCSCQPL*QTLLSLSVAQS Trigger: CGACTGCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 72 bp | CAAGCCAGGCTCCTTGCTGCTCTCCATGTCTGTCCGTaGAGCTGCCAGCCGCTTTGCCAGACTCTCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: QARLLAALHVCP*SCQPLCQTLLS Trigger: ACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 72 bp | AGGCTCCTTGCTGCTCTCCATGTCTGTCCGTGCAGCTaGCAGCCGCTTTGCCAGACTCTCCTCAGTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: RLLAALHVCPCS*QPLCQTLLSLS Trigger: ACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CAA 72 bp | ACTCTCCTCAGTCTCAGTGTTGCGCAGTCGCAGTCGTaGCTCCAGCACGTCCAGCGAGGGAGGCTGCACAAA | + |
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Preference number: 6 (lower is better) Translates to: TLLSLSVAQSQS*LQHVQRGRLHK Trigger: TTTGTGCAGCCTCCCTCGCTGGACGTGCTGGAGCAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CAA 90 bp | TCCAGGTCGTCATTGATGATCACCAGGTCAAACAAGCCAGGCTCCTaGCTGCTCTCCATGTCTGTCCGTGCAGCTGCCAGCCGCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SRSSLMITRSNKPGS*LLSMSVRAAASRFA Trigger: GGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCTTGTTTGACCTGGTGATCATCAATGACGACCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 72 bp | AGGTCGACATCTAGCACGCAGATGCGGTTCATGGCCTaGACAGCCCGAACAGCTTCCTTGCTTGTCCCGTAC | + |
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Preference number: 6 (lower is better) Translates to: RSTSSTQMRFMA*TARTASLLVPY Trigger: GTACGGGACAAGCAAGGAAGCTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCGTGCTAGATGTCGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 72 bp | TGCGCACACCTTGTAGGTCGACATCTAGCACGCAGATaGGGTTCATGGCCTGCACAGCCCGAACAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CAHLVGRHLARR*GSWPAQPEQLP Trigger: AGGAAGCTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCGTGCTAGATGTCGACCTACAAGGTGTGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CAA 90 bp | CTTTGCCAGACTCTCCTCAGTCTCAGTGTTGCGCAGTCGCAGTCGTaGCTCCAGCACGTCCAGCGAGGGAGGCTGCACAAAGATGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: LCQTLLSLSVAQSQS*LQHVQRGRLHKDVD Trigger: ATCTACATCTTTGTGCAGCCTCCCTCGCTGGACGTGCTGGAGCAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAGTCTGGCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CCA 72 bp | CTTGTAGGTCGACATCTAGCACGCAGATGCGGTTCATaGCCTGCACAGCCCGAACAGCTTCCTTGCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LVGRHLARRCGS*PAQPEQLPCLS Trigger: GGACAAGCAAGGAAGCTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCGTGCTAGATGTCGACCTACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS TCA 72 bp | CCGAACAGCTTCCTTGCTTGTCCCGTACAGGTTCCCTaGGAACTCAGCATGCTCAATGAAGTCCCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PNSFLACPVQVP*ELSMLNEVPCC Trigger: GCAGCAGGGGACTTCATTGAGCATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCAAGGAAGCTGTTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS CAA 72 bp | TCATTGATGATCACCAGGTCAAACAAGCCAGGCTCCTaGCTGCTCTCCATGTCTGTCCGTGCAGCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLMITRSNKPGS*LLSMSVRAAAS Trigger: GCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCTTGTTTGACCTGGTGATCATCAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS TCA 72 bp | CCATCTTCTTCACCAGGTCGTGGGTTCCTTGTAGTATaGGACACGCTGAAGCCGAAGATGCTGCTGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSSSPGRGFLVV*DTLKPKMLLCS Trigger: GGAGCACAGCAGCATCTTCGGCTTCAGCGTGTCTCATACTACAAGGAACCCACGACCTGGTGAAGAAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 72 bp | TTGCTTGTCCCGTACAGGTTCCCTGAGAACTCAGCATaGTCAATGAAGTCCCCTGCTGCAATATCACGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLVPYRFPENSA*SMKSPAAISRC Trigger: GCAGCGTGATATTGCAGCAGGGGACTTCATTGAGCATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS TCA 72 bp | GCACAAAGATGTAGATGGGACACAGATCAGTCTTCTTaGTGCTGCGCACACCTTGTAGGTCGACATCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: AQRCRWDTDQSS*CCAHLVGRHLA Trigger: TGCTAGATGTCGACCTACAAGGTGTGCGCAGCATCAAGAAGACTGATCTGTGTCCCATCTACATCTTTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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| CDS GCA 72 bp | TTTCTTGATTTCCTCAGAGAGCGCCTGCTTCAGGGTTaGATAGGCTTTATCCAGGTCGTCATTGATGATCAC | + |
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Preference number: 6 (lower is better) Translates to: FLDFLRERLLQG*IGFIQVVIDDH Trigger: GTGATCATCAATGACGACCTGGATAAAGCCTATGCAACCCTGAAGCAGGCGCTCTCTGAGGAAATCAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170202.9 ENSMUST00000170895.3 |
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