RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GUCY2F (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042282

Ensembl transcript IDs: ENSMUST00000042530.4

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGATCCACATGTTGAGAACCACTGGGTTAGACAGCAATTAACTTaGAGGCCTACACGTGGGGAAGCACAGAATGGGATATGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: CDPHVENHWVRQQLT*RPTRGEAQNGICLG
Trigger: TCCCAGACATATCCCATTCTGTGCTTCCCCACGTGTAGGCCTTCAAGTTAATTGCTGTCTAACCCAGTGGTTCTCAACATGTGGATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 90 bp GGGATGATTCATATCAATAGAATGCTGTACCCAACATTCTATGGATaGCTTAGCACTAGTGCCCATGCTTTGCCTCCAATGCTCCATCCA +
Preference number: 1 (lower is better)
Translates to: GMIHINRMLYPTFYG*LSTSAHALPPMLHP
Trigger: TGGATGGAGCATTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATATGAATCATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR GCA 90 bp TCATCAGAAGGAAGTGAAGTCAACATCAGTCTTGCTACATCCTCCTaGATAGTAAGTGAACCACCTGAGGCTGTGATACCTAGCAATGTA +
Preference number: 1 (lower is better)
Translates to: SSEGSEVNISLATSS*IVSEPPEAVIPSNV
Trigger: TACATTGCTAGGTATCACAGCCTCAGGTGGTTCACTTACTATGCAGGAGGATGTAGCAAGACTGATGTTGACTTCACTTCCTTCTGATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 90 bp GAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATaGCTAAACTCAGAGTTGGTTATATCCCTCTCCTGGGTGTTTACA +
Preference number: 1 (lower is better)
Translates to: ERPLFFIQVDHATLE*LNSELVISLSWVFT
Trigger: TGTAAACACCCAGGAGAGGGATATAACCAACTCTGAGTTTAGTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 90 bp GACAGTGTCTCTTACATTTATTCTGGTATGTTCAGTGTATGTCCCTaGGGCCCAGGAAGAGCCTCACCTAGCAAGGACAATTCAATTATA +
Preference number: 1 (lower is better)
Translates to: DSVSYIYSGMFSVCP*GPGRASPSKDNSII
Trigger: TATAATTGAATTGTCCTTGCTAGGTGAGGCTCTTCCTGGGCCTCAGGGACATACACTGAACATACCAGAATAAATGTAAGAGACACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 90 bp TCAACCAGGTGGGACATATTATTGATTAGACCACCCATGGTTGCCTaGAGAAGTGAATGTAAATGGTTCAACCACTGTGCTCTTTCAGCT +
Preference number: 1 (lower is better)
Translates to: STRWDILLIRPPMVA*RSECKWFNHCALSA
Trigger: AGCTGAAAGAGCACAGTGGTTGAACCATTTACATTCACTTCTTCAGGCAACCATGGGTGGTCTAATCAATAATATGTCCCACCTGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 90 bp TTTTATGAAGCTCTCATGTATCACACAGGCTGGTCTCAAACTCACTaGGTAGATGATGATGGCCTTGAACCTCTGATTCTTACCTCTACC +
Preference number: 1 (lower is better)
Translates to: FYEALMYHTGWSQTH*VDDDGLEPLILTST
Trigger: GGTAGAGGTAAGAATCAGAGGTTCAAGGCCATCATCATCTACTCAGTGAGTTTGAGACCAGCCTGTGTGATACATGAGAGCTTCATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 90 bp AAAACCAAACCAAACCAACCAAACAAACAAATAAGAACAGTGCTTTaGAAGAAATCATTCAGGTCCCTACCAGCTCCACCCACTGTGCTA +
Preference number: 1 (lower is better)
Translates to: KTKPNQPNKQIRTVL*KKSFRSLPAPPTVL
Trigger: TAGCACAGTGGGTGGAGCTGGTAGGGACCTGAATGATTTCTTTCAAAGCACTGTTCTTATTTGTTTGTTTGGTTGGTTTGGTTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CCA 90 bp GTGAGAATATATGCCTGGTCTTATTGTAGCATGTTATGCTGTATTTaGTTGATGTCTCTGGAAGAACTGTACTTTTCTGAGGGGAGACAA +
Preference number: 1 (lower is better)
Translates to: VRIYAWSYCSMLCCI*LMSLEELYFSEGRQ
Trigger: TTGTCTCCCCTCAGAAAAGTACAGTTCTTCCAGAGACATCAACCAAATACAGCATAACATGCTACAATAAGACCAGGCATATATTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 90 bp ACATCATCTCTTATTCTAGAAGGAAAGTTTTTAAAGCTCAGCTCTTaGCTGACACAAAGAGGTGATGACATGTCTGTCTCCTTCTTCTCT +
Preference number: 1 (lower is better)
Translates to: TSSLILEGKFLKLSS*LTQRGDDMSVSFFS
Trigger: AGAGAAGAAGGAGACAGACATGTCATCACCTCTTTGTGTCAGTCAAGAGCTGAGCTTTAAAAACTTTCCTTCTAGAATAAGAGATGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 90 bp AGGAATAATCATTCACTAGTATCTTGCTCAGGCAGGAGAATATCATaGTCTTTAATGAGCTTCTGTAATGAGCTTCAATGTTGCTTTGCC +
Preference number: 1 (lower is better)
Translates to: RNNHSLVSCSGRRIS*SLMSFCNELQCCFA
Trigger: GGCAAAGCAACATTGAAGCTCATTACAGAAGCTCATTAAAGATCATGATATTCTCCTGCCTGAGCAAGATACTAGTGAATGATTATTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CCA 90 bp TCGTTTATGTCTATGCCTGTGCTATATCTATCAACTATCTTGACCTaGCAAGAAGACATGAGACAGAAAAACAACACATTTTATTGTGCA +
Preference number: 1 (lower is better)
Translates to: SFMSMPVLYLSTILT*QEDMRQKNNTFYCA
Trigger: TGCACAATAAAATGTGTTGTTTTTCTGTCTCATGTCTTCTTGCCAGGTCAAGATAGTTGATAGATATAGCACAGGCATAGACATAAACGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CAA 90 bp AACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATaGGGCTTGACTTTTCCCTGGAGATTAGGCCACCTCAGAGGAATA +
Preference number: 2 (lower is better)
Translates to: NLWAKFLPRRLHTLG*GLTFPWRLGHLRGI
Trigger: TATTCCTCTGAGGTGGCCTAATCTCCAGGGAAAAGTCAAGCCCAATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CAA 90 bp TGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATTGGGCTaGACTTTTCCCTGGAGATTAGGCCACCTCAGAGGAATAATCATT +
Preference number: 2 (lower is better)
Translates to: WAKFLPRRLHTLGLG*TFPWRLGHLRGIII
Trigger: AATGATTATTCCTCTGAGGTGGCCTAATCTCCAGGGAAAAGTCAAGCCCAATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CAA 90 bp AGATGTGAGCACCTAGCTGCTTGGCTGTGTGCCACTTCCTACTCTTaGCAAGCTGATTCCATTTGGATTGAGGACAATCCAATTGATGTG +
Preference number: 2 (lower is better)
Translates to: RCEHLAAWLCATSYS*QADSIWIEDNPIDV
Trigger: CACATCAATTGGATTGTCCTCAATCCAAATGGAATCAGCTTGCAAAGAGTAGGAAGTGGCACACAGCCAAGCAGCTAGGTGCTCACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR GCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGGGAGAGAAAAAGAACTaGTGGGGTTGGCTCTCGACT +
Preference number: 2 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLGEKKN*WGWLST
Trigger: AGTCGAGAGCCAACCCCAGCAGTTCTTTTTCTCTCC...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CCA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTAATGAACAAAACCTATaGGCAAAGTTCCTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGNEQNL*AKFLPR
Trigger: CCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCATT...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGAAGAACTGCTGGGGTTaGCTCTCGACTCCAAACTCA +
Preference number: 2 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLKNCWG*LSTPNS
Trigger: TGAGTTTGGAGTCGAGAGCCAACCCCAGCAGTTCTT...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGGAGGGGAGACAAAGTTaGAATGATAGGGCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLEGRQS*NDRAGE
Trigger: TTCCCCTGCCCTATCATTCCAACTTTGTCTCCCCTC...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR TCA 90 bp CTAGTAAAGAACTGTGTTACCTCTCCTGAAAGAGAAACACTGCTTCACATCATCGCTCCCTTGCTTCTGTaGCTTCTATGTCTTTTACCC +
Preference number: 2 (lower is better)
Translates to: LVKNCVTSPERETLLHIIAPLLL*LLCLLP
Trigger: GGGTAAAAGACATAGAAGTCACAGAAGCAAGGGAGC...GATGATGTGAAGCAGTGTTTCTCTTTCAGGAGAGGTAACACAGTTCTTTACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR TCA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTATTTTGTGGACATACTaGACAGCTAAAGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGILWTY*TAKGKE
Trigger: TTCTTTCCCTTTAGCTGTTCAGTATGTCCACAAAAT...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR TCA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTATAATACTCAATGGATaGCCATTGCAATATGCCATG +
Preference number: 2 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGIILNG*PLQYAM
Trigger: CATGGCATATTGCAATGGTCATCCATTGAGTATTAT...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CAA 90 bp AAAAACCAAACCAAACCAACCAAACAAACAAATAAGAACAGTGCTTaGAAAGAAATCATTCAGGTCCCTACCAGCTCCACCCACTGTGCT +
Preference number: 2 (lower is better)
Translates to: KNQTKPTKQTNKNSA*KEIIQVPTSSTHCA
Trigger: AGCACAGTGGGTGGAGCTGGTAGGGACCTGAATGATTTCTTTCAAAGCACTGTTCTTATTTGTTTGTTTGGTTGGTTTGGTTTGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR TCA 90 bp CTAGTAAAGAACTGTGTTACCTCTCCTGAAAGAGAAACACTGCTTCACATCATCCTGCCAATAGCCTCTTaGAAATACAACCTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: LVKNCVTSPERETLLHIILPIAS*KYNLEN
Trigger: GTTTTCAAGGTTGTATTTTCAAGAGGCTATTGGCAG...GATGATGTGAAGCAGTGTTTCTCTTTCAGGAGAGGTAACACAGTTCTTTACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR GCA 90 bp CTAGTAAAGAACTGTGTTACCTCTCCTGAAAGAGAAACACTGCTTCACATCATCGCTTCAATGTTGCTTTaGCAAGAGGAGATTCAAATG +
Preference number: 2 (lower is better)
Translates to: LVKNCVTSPERETLLHIIASMLL*QEEIQM
Trigger: CATTTGAATCTCCTCTTGGCAAAGCAACATTGAAGC...GATGATGTGAAGCAGTGTTTCTCTTTCAGGAGAGGTAACACAGTTCTTTACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR GCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGTCAATGGATGACCATTaGAATATGCCATGGTCTACA +
Preference number: 2 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLSMDDH*NMPWST
Trigger: TGTAGACCATGGCATATTGCAATGGTCATCCATTGA...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CAA 90 bp AGAATATATGCCTGGTCTTATTGTAGCATGTTATGCTGTATTTGGTaGATGTCTCTGGAAGAACTGTACTTTTCTGAGGGGAGACAAAGT +
Preference number: 2 (lower is better)
Translates to: RIYAWSYCSMLCCIW*MSLEELYFSEGRQS
Trigger: ACTTTGTCTCCCCTCAGAAAAGTACAGTTCTTCCAGAGACATCAACCAAATACAGCATAACATGCTACAATAAGACCAGGCATATATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR TCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGGGCAGGAGAATATCATaGTCTTTAATGAGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: THIERNLSWKMNMRLEAEGRRIS*SLMSFC
Trigger: ACAGAAGCTCATTAAAGATCATGATATTCTCCTGCC...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR TCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCACTGCCTACTTTTTATaGAAAGAGAGACCTCTTTTC +
Preference number: 2 (lower is better)
Translates to: ISIECCTQHSMDDLALVPTAYFL*KERPLF
Trigger: GAAAAGAGGTCTCTCTTTTCATAAAAAGTAGGCAGT...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR TCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGCTATGTCTTTTACCCTaGCAGTGTCTCTTACATTTA +
Preference number: 2 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLLCLLP*QCLLHL
Trigger: TAAATGTAAGAGACACTGTCAGGGTAAAAGACATAG...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGCTCTTACATTTATTCTaGTATGTTCAGTGTATGTCC +
Preference number: 2 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLLLHLF*YVQCMS
Trigger: GGACATACACTGAACATACCAGAATAAATGTAAGAG...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR GCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGACATTCATTTCAGTTTaGATTCCAATAGTTTGGGGT +
Preference number: 2 (lower is better)
Translates to: THIERNLSWKMNMRLEAETFISV*IPIVWG
Trigger: ACCCCAAACTATTGGAATGCAAACTGAAATGAATGT...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CCA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTGAAAGGAATCTCTCTTaGAAAATGAATATGAGGTTG +
Preference number: 2 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFERNLS*KMNMRL
Trigger: CAACCTCATATTCATTTTCCAAGAGAGATTCCTTTC...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CCA 72 bp GGGTTAGGATTACAGTTATGTACCACCACATCTGACTaGCATACTGGGGGTTGGACCTTGCTAGGGTCATGT +
Preference number: 3 (lower is better)
Translates to: GLGLQLCTTTSD*HTGGWTLLGSC
Trigger: ACATGACCCTAGCAAGGTCCAACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CCA 72 bp GCTGGATTATCAGATAGATGTGAGCACCTAGCTGCTTaGCTGTGTGCCACTTCCTACTCTTTGCAAGCTGAT +
Preference number: 3 (lower is better)
Translates to: AGLSDRCEHLAA*LCATSYSLQAD
Trigger: ATCAGCTTGCAAAGAGTAGGAAGTGGCACACAGCCAAGCAGCTAGGTGCTCACATCTATCTGATAATCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CAA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGAACACTGGGATTGGGCTaGACTTTTCCCTGGAGATTA +
Preference number: 3 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGTLGLG*TFPWRL
Trigger: TAATCTCCAGGGAAAAGTCAAGCCCAATCCCAGTGT...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 72 bp CATGTTGAGAACCACTGGGTTAGACAGCAATTAACTTaGAGGCCTACACGTGGGGAAGCACAGAATGGGATA +
Preference number: 3 (lower is better)
Translates to: HVENHWVRQQLT*RPTRGEAQNGI
Trigger: TATCCCATTCTGTGCTTCCCCACGTGTAGGCCTTCAAGTTAATTGCTGTCTAACCCAGTGGTTCTCAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 72 bp TCTTACATTTATTCTGGTATGTTCAGTGTATGTCCCTaGGGCCCAGGAAGAGCCTCACCTAGCAAGGACAAT +
Preference number: 3 (lower is better)
Translates to: SYIYSGMFSVCP*GPGRASPSKDN
Trigger: ATTGTCCTTGCTAGGTGAGGCTCTTCCTGGGCCTCAGGGACATACACTGAACATACCAGAATAAATGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 72 bp GCTCTCATGTATCACACAGGCTGGTCTCAAACTCACTaGGTAGATGATGATGGCCTTGAACCTCTGATTCTT +
Preference number: 3 (lower is better)
Translates to: ALMYHTGWSQTH*VDDDGLEPLIL
Trigger: AAGAATCAGAGGTTCAAGGCCATCATCATCTACTCAGTGAGTTTGAGACCAGCCTGTGTGATACATGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CAA 90 bp ATGAACAAAACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATTCATTCACTAGTATCTaGCTCAGGCAGGAGAATATC +
Preference number: 3 (lower is better)
Translates to: MNKTYGQSSFPGDSIHWDSFTSI*LRQENI
Trigger: GATATTCTCCTGCCTGAGCAAGATACTAGTGAATGA...ATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CAA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTAAAATGAATATGAGGTaGGAGGCAGAGCAGTCAGAA +
Preference number: 3 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGKMNMR*EAEQSE
Trigger: TTCTGACTGCTCTGCCTCCAACCTCATATTCATTTT...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 72 bp CTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATaGCTAAACTCAGAGTTGGTTATATCCCTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: LFFIQVDHATLE*LNSELVISLSW
Trigger: CCAGGAGAGGGATATAACCAACTCTGAGTTTAGTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR GCA 72 bp CATTCTATGGATGACTTAGCACTAGTGCCCATGCTTTaGCTCCAATGCTCCATCCATTTTCCTAGTAAAGAA +
Preference number: 3 (lower is better)
Translates to: HSMDDLALVPML*LQCSIHFPSKE
Trigger: TTCTTTACTAGGAAAATGGATGGAGCATTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CAA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGTTTACCTCCCATTCATaGTCTCTGTTCTCCAGTCAC +
Preference number: 3 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLFTSHS*SLFSSH
Trigger: GTGACTGGAGAACAGAGACAATGAATGGGAGGTAAA...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 72 bp TGGGACATATTATTGATTAGACCACCCATGGTTGCCTaGAGAAGTGAATGTAAATGGTTCAACCACTGTGCT +
Preference number: 3 (lower is better)
Translates to: WDILLIRPPMVA*RSECKWFNHCA
Trigger: AGCACAGTGGTTGAACCATTTACATTCACTTCTTCAGGCAACCATGGGTGGTCTAATCAATAATATGTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR GCA 72 bp AAGGGGAAATATAAGACTTCAAAGAAATCGCTCCCTTaGTTCTGTGACTTCTATGTCTTTTACCCTGACAGT +
Preference number: 3 (lower is better)
Translates to: KGKYKTSKKSLP*FCDFYVFYPDS
Trigger: ACTGTCAGGGTAAAAGACATAGAAGTCACAGAAGCAAGGGAGCGATTTCTTTGAAGTCTTATATTTCCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CCA 72 bp AGAAGTCAGCTGTCCCTTTCCCTGCAGTTAATCTCATaGCATCTGAGTTATCAGTTATGTGTACTAAAATCT +
Preference number: 3 (lower is better)
Translates to: RSQLSLSLQLIS*HLSYQLCVLKS
Trigger: AGATTTTAGTACACATAACTGATAACTCAGATGCCATGAGATTAACTGCAGGGAAAGGGACAGCTGACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR GCA 72 bp GTGAGAATATATGCCTGGTCTTATTGTAGCATGTTATaGTGTATTTGGTTGATGTCTCTGGAAGAACTGTAC +
Preference number: 3 (lower is better)
Translates to: VRIYAWSYCSML*CIWLMSLEELY
Trigger: GTACAGTTCTTCCAGAGACATCAACCAAATACAGCATAACATGCTACAATAAGACCAGGCATATATTCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CCA 72 bp TATGCCTGGTCTTATTGTAGCATGTTATGCTGTATTTaGTTGATGTCTCTGGAAGAACTGTACTTTTCTGAG +
Preference number: 3 (lower is better)
Translates to: YAWSYCSMLCCI*LMSLEELYFSE
Trigger: CTCAGAAAAGTACAGTTCTTCCAGAGACATCAACCAAATACAGCATAACATGCTACAATAAGACCAGGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 72 bp CATTCACTAGTATCTTGCTCAGGCAGGAGAATATCATaGTCTTTAATGAGCTTCTGTAATGAGCTTCAATGT +
Preference number: 3 (lower is better)
Translates to: HSLVSCSGRRIS*SLMSFCNELQC
Trigger: ACATTGAAGCTCATTACAGAAGCTCATTAAAGATCATGATATTCTCCTGCCTGAGCAAGATACTAGTGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 72 bp ATCCATTTTCCTAGTAAAGAACTGTGTTACCTCTCCTaGAAGAGAAACACTGCTTCACATCATCTCTTATTC +
Preference number: 3 (lower is better)
Translates to: IHFPSKELCYLS*KRNTASHHLLF
Trigger: GAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAGAGGTAACACAGTTCTTTACTAGGAAAATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR TCA 72 bp AAATATCTGTTTTCCAATCATCTTAGGCAATCTTTGTaGAAGGTTCACTGGCTCTGCCAAAGAGTTTGTGAT +
Preference number: 3 (lower is better)
Translates to: KYLFSNHLRQSL*KVHWLCQRVCD
Trigger: ATCACAAACTCTTTGGCAGAGCCAGTGAACCTTTCACAAAGATTGCCTAAGATGATTGGAAAACAGATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CCA 72 bp GTTGACTCATCTAGCTTTAGTGTGAGAATATATGCCTaGTCTTATTGTAGCATGTTATGCTGTATTTGGTTG +
Preference number: 3 (lower is better)
Translates to: VDSSSFSVRIYA*SYCSMLCCIWL
Trigger: CAACCAAATACAGCATAACATGCTACAATAAGACCAGGCATATATTCTCACACTAAAGCTAGATGAGTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR-3UTR CAA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTTACATTCATTTCAGTTaGCATTCCAATAGTTTGGGG +
Preference number: 3 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFYIHFS*HSNSLG
Trigger: CCCCAAACTATTGGAATGCAAACTGAAATGAATGTA...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR GCA 72 bp GAAGCCAATGTGAGTATACAGATTAGTAATTACTTCTaGTCTGGGTCTTTCTTTGGAATGCAATTCGTTATT +
Preference number: 3 (lower is better)
Translates to: EANVSIQISNYF*SGSFFGMQFVI
Trigger: AATAACGAATTGCATTCCAAAGAAAGACCCAGAGCAGAAGTAATTACTAATCTGTATACTCACATTGGCTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CAA 72 bp GCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATaGGGCTTGACTTTTCCCTGGAGATTAGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: AKFLPRRLHTLG*GLTFPWRLGHL
Trigger: GAGGTGGCCTAATCTCCAGGGAAAAGTCAAGCCCAATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp GAAAAGAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATGACGCTGGTTCCCAGGAGTaGGGCTGCCTCGCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: EKRDLFSSSKLTTLLWNDAGSQE*GCLAEA
Trigger: GGCTTCTGCGAGGCAGCCTCACTCCTGGGAACCAGC...GTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ATGAACAAAACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATCCTCTTGGGAAGGCCTaGGGCCACCATGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: MNKTYGQSSFPGDSIHWDPLGKA*GHHVGI
Trigger: GATGCCTACATGGTGGCCTCAGGCCTTCCCAAGAGG...ATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGAGATCTTGTAGGGGAGTaGTTGCCCCCACCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGDLVGE*LPPPKE
Trigger: CTCCTTCGGTGGGGGCAAGCACTCCCCTACAAGATC...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ATGAACAAAACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATGAGGCCATGCTGTCCTaGCAGTCTGCTGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: MNKTYGQSSFPGDSIHWDEAMLS*QSAGNG
Trigger: GCCATTTCCAGCAGACTGTCAGGACAGCATGGCCTC...ATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ATGAACAAAACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATAGGCCCAACAAATCCTaGGGCCATCTGCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: MNKTYGQSSFPGDSIHWDRPNKS*GHLLVG
Trigger: TCCCACCAGCAGATGGCCTCAGGATTTGTTGGGCCT...ATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGACAGCTGCATGCCTACTaGCATTCCTCTTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGQLHAY*HSSWEG
Trigger: GCCTTCCCAAGAGGAATGGCAGTAGGCATGCAGCTG...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTCCTACAGGTAGGCCCTaGCTCCGAAGAGCACTTGAG +
Preference number: 4 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGPTGRP*LRRALE
Trigger: CTCAAGTGCTCTTCGGAGCCAGGGCCTACCTGTAGG...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGACAGCTGGAGACATTCTaGAGGGGCATACTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGQLETF*RGILRR
Trigger: TCTCCTGAGTATGCCCCTGCAGAATGTCTCCAGCTG...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp ATGAACAAAACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATAAGCCATGGCCCACTTaGCCATCTTTGCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: MNKTYGQSSFPGDSIHWDKPWPT*PSLPTG
Trigger: ACCAGTGGGCAAAGATGGGCAAGTGGGCCATGGCTT...ATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGACACTGCTTCATCAGCTaGAGACATTCTGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGHCFIS*RHSAGA
Trigger: TGCCCCTGCAGAATGTCTCCAGCTGATGAAGCAGTG...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ATGAACAAAACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATGCTCCGAAGAGCACTTaGGACTCGATTGGCTGTATG +
Preference number: 4 (lower is better)
Translates to: MNKTYGQSSFPGDSIHWDAPKST*DSIGCM
Trigger: CATACAGCCAATCGAGTCTCAAGTGCTCTTCGGAGC...ATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp GAAAAGAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATGACCCACTTGCCCATCTTTaGCCACTGGTGGGGGTACAG +
Preference number: 4 (lower is better)
Translates to: EKRDLFSSSKLTTLLWNDPLAHL*PLVGVQ
Trigger: CTGTACCCCCACCAGTGGGCAAAGATGGGCAAGTGG...GTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp TGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCATGCTTTGCCTCCAAATGTTTCTGGAATGCTaGACCAGGCTGGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: CTQHSMDDLALVPMLCLQMFLEC*TRLAAL
Trigger: TAGTGCTGCCAGCCTGGTTCAGCATTCCAGAAACAT...TTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp GAAAAGAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATGACAATATCTGGGCATGGTaGGGCCCACCACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: EKRDLFSSSKLTTLLWNDNIWAW*GPPLQQ
Trigger: TTGCTGGAGTGGTGGGCCTCACCATGCCCAGATATT...GTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp TGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCATGCTTTGCCTCCAAGCAATCTCAGCTGCATaGCTACTGCCATTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CTQHSMDDLALVPMLCLQAISAA*LLPFLL
Trigger: CAAGAGGAATGGCAGTAGGCATGCAGCTGAGATTGC...TTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp TGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCATGCTTTGCCTCCAAACAGTCTGCTGGAAATaGCAAACCAGGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: CTQHSMDDLALVPMLCLQTVCWK*QTRTEG
Trigger: GCCTTCTGTCCTGGTTTGCCATTTCCAGCAGACTGT...TTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp GAAAAGAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATGACGAGGCCATCTGCTGGTaGGAAATGAAACTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: EKRDLFSSSKLTTLLWNDEAICW*EMKLAR
Trigger: CCTCGCCAGTTTCATTTCCCACCAGCAGATGGCCTC...GTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCCGCAGAAGCCAGGGTTaGCAGGCCCAACAAATCCTG +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPRRSQG*QAQQIL
Trigger: CAGGATTTGTTGGGCCTGCCAACCCTGGCTTCTGCG...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCTCCCTTTGTCCCAGCTaGTTCCCAGGAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPSLCPS*FPGVRL
Trigger: CAGCCTCACTCCTGGGAACCAGCTGGGACAAAGGGA...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ACTAGAAGTCAGCTGTCCCTTTCCCTGCAGTTAATCTCATGGCATCTGAGTTATCGAATTCTGTCTGCCTaGCGAATCTGCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TRSQLSLSLQLISWHLSYRILSA*RICWRA
Trigger: AGCTCTCCAGCAGATTCGCCAGGCAGACAGAATTCG...ATAACTCAGATGCCATGAGATTAACTGCAGGGAAAGGGACAGCTGACTTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGAGGGTCAATACCTCCTTaGCAGATCTTCCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGGSIPP*QIFLSA
Trigger: TGCAGAAAGGAAGATCTGCCAAGGAGGTATTGACCC...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp GAAAAGAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATGACGCTGGTTGCAAGCCATaGCCCACTTGCCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: EKRDLFSSSKLTTLLWNDAGCKP*PTCPSL
Trigger: CAAAGATGGGCAAGTGGGCCATGGCTTGCAACCAGC...GTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp GAAAAGAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATGACGGGGACCTCCCACTTTaGACTTCTGAGATGATCTGG +
Preference number: 4 (lower is better)
Translates to: EKRDLFSSSKLTTLLWNDGDLPL*TSEMIW
Trigger: CCAGATCATCTCAGAAGTTCAAAGTGGGAGGTCCCC...GTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp GAAAAGAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATGACCCTCAGGCAGGGCCTTaGAAAAGAACGGATCACATG +
Preference number: 4 (lower is better)
Translates to: EKRDLFSSSKLTTLLWNDPQAGP*KRTDHM
Trigger: CATGTGATCCGTTCTTTTCCAAGGCCCTGCCTGAGG...GTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCCCTGAGGCCATCTGCTaGTGGGAAATGAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPPEAIC*WEMKLA
Trigger: CGCCAGTTTCATTTCCCACCAGCAGATGGCCTCAGG...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ACTAGAAGTCAGCTGTCCCTTTCCCTGCAGTTAATCTCATGGCATCTGAGTTATTATTCGAATTCGGACTaGCACCTCTGGCATGTGTCG +
Preference number: 4 (lower is better)
Translates to: TRSQLSLSLQLISWHLSYYSNSD*HLWHVS
Trigger: CGACACATGCCAGAGGTGCCAGTCCGAATTCGAATA...ATAACTCAGATGCCATGAGATTAACTGCAGGGAAAGGGACAGCTGACTTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ACTAGAAGTCAGCTGTCCCTTTCCCTGCAGTTAATCTCATGGCATCTGAGTTATATCTTTGCCCACTGGTaGGGGTACAGGAAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TRSQLSLSLQLISWHLSYIFAHW*GYRKRF
Trigger: AAACCTCTTCCTGTACCCCCACCAGTGGGCAAAGAT...ATAACTCAGATGCCATGAGATTAACTGCAGGGAAAGGGACAGCTGACTTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCTGCTGGAGAGCTTTCTaGATGCTCTGGCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPCWRAF*MLWLSR
Trigger: ACGAGACAGCCAGAGCATTCAGAAAGCTCTCCAGCA...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGGGAGAGCTTTCTGAATaGTCTGGCTGTCTCGTCCCG +
Preference number: 4 (lower is better)
Translates to: THIERNLSWKMNMRLEAEGELSE*SGCLVP
Trigger: CGGGACGAGACAGCCAGAGCATTCAGAAAGCTCTCC...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGATTTTCTCCTTTGGAATaGTGCAATCTCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGFSPLE*CNLCWL
Trigger: CAACCAGCAGAGATTGCAGCATTCCAAAGGAGAAAA...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGGGCTTCCCGGAGCTTTaGATTGTTCCTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: THIERNLSWKMNMRLEAEGFPEL*IVPQDL
Trigger: CAGGTCCTGAGGAACAATCCAAAGCTCCGGGAAGCC...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGTGCTGCAATCTCTGCTaGTTGCAAGCCATGGCCCAC +
Preference number: 4 (lower is better)
Translates to: THIERNLSWKMNMRLEAECCNLC*LQAMAH
Trigger: GTGGGCCATGGCTTGCAACCAGCAGAGATTGCAGCA...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGATCTGCTTTTCTCCTTTaGAATGCTGCAATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGSAFLL*NAAISA
Trigger: AGCAGAGATTGCAGCATTCCAAAGGAGAAAAGCAGA...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTTCTGCTGGTGGGAAATaGAACTGGCGAGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFSAGGK*NWRGPL
Trigger: CAAAGGCCCTCGCCAGTTTCATTTCCCACCAGCAGA...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGAACTCGATTGGCTGTATaGATCCAAATGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGTRLAV*IQMSSS
Trigger: AGATGAAGACATTTGGATGCATACAGCCAATCGAGT...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp TGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCATGCTTTGCCTCCAATGCAAACCAGCATTTTaGATCTGCACTAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: CTQHSMDDLALVPMLCLQCKPAF*ICTSRS
Trigger: AGACCTACTAGTGCAGATGCAAAATGCTGGTTTGCA...TTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp TGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCATGCTTTGCCTCCAACGAACCATCACTTCTTaGATGATGATGGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: CTQHSMDDLALVPMLCLQRTITS*MMMAKL
Trigger: TAGCTTTGCCATCATCATGCAAGAAGTGATGGTTCG...TTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGGAATGCTGCAATCTCTaGTGGTTGCAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: THIERNLSWKMNMRLEAEECCNL*WLQAMA
Trigger: GGCCATGGCTTGCAACCAGCAGAGATTGCAGCATTC...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGGTCCTGACAGTCTGCTaGAAATGGCAAACCAGGACA +
Preference number: 4 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLVLTVC*KWQTRT
Trigger: TGTCCTGGTTTGCCATTTCCAGCAGACTGTCAGGAC...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCAACATCTCAGGAACTTaGAGGAAGGGAGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPNISGT*RKGGHA
Trigger: AGCATGGCCTCCCTTCCTCCAAGTTCCTGAGATGTT...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTAACAACGGTGAAACTTaGTTTGAGTCAGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGNNGET*FESGFS
Trigger: TGAGAAGCCTGACTCAAACCAAGTTTCACCGTTGTT...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCCAAAGCAGACCATCATaGCCAAGGCAGGGTCAATAC +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPQSRPS*PRQGQY
Trigger: GTATTGACCCTGCCTTGGCCATGATGGTCTGCTTTG...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CAA 72 bp CTAAACTCCATTGATTTCCTCTGTAGTATGATGGACTaGACACCTCCAAAGGCCCTACCAAGTCTGGTTACA +
Preference number: 4 (lower is better)
Translates to: LNSIDFLCSMMD*TPPKALPSLVT
Trigger: TGTAACCAGACTTGGTAGGGCCTTTGGAGGTGTCAAGTCCATCATACTACAGAGGAAATCAATGGAGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTCTTCATCTGAGGAAATaGCCCCAGCATGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFLHLRK*PQHVPT
Trigger: AGTGGGCACATGCTGGGGTCATTTCCTCAGATGAAG...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGAAATCCCATTTCCATTTaGGTCTGTCTTTATCAACTG +
Preference number: 4 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGNPISI*VCLYQL
Trigger: CAGTTGATAAAGACAGACTCAAATGGAAATGGGATT...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCGAATTGGGGTCCCTCTaGACCTTAGCAGTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPELGSL*TLAVQF
Trigger: AAACTGAACTGCTAAGGTTCAGAGGGACCCCAATTC...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp CTAGTAAAGAACTGTGTTACCTCTCCTGAAAGAGAAACACTGCTTCACATCATCCTGTACAGCCCTTCTTaGGGGATTCAGCAACTGATA +
Preference number: 4 (lower is better)
Translates to: LVKNCVTSPERETLLHIILYSPS*GIQQLI
Trigger: TATCAGTTGCTGAATCCCTCAAGAAGGGCTGTACAG...GATGATGTGAAGCAGTGTTTCTCTTTCAGGAGAGGTAACACAGTTCTTTACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp TATAAGACTTCAAAGAAATCGCTCCCTTGCTTCTGTGACTTCTATGTCTTTTACCTGTGCCTTTGCCCTTaGGCTCTGTTCTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: YKTSKKSLPCFCDFYVFYLCLCP*ALFFHE
Trigger: TTCGTGGAAGAACAGAGCTCAAGGGCAAAGGCACAG...GTAAAAGACATAGAAGTCACAGAAGCAAGGGAGCGATTTCTTTGAAGTCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGAATCCTGAGGCCATCTaGTGGTGGGAAATGAAACTG +
Preference number: 4 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLNPEAI*WWEMKL
Trigger: CAGTTTCATTTCCCACCAGCAGATGGCCTCAGGATT...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCTGTCCACAGTGTAGGTaGCACGAAGTTCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPCPQCR*HEVPIL
Trigger: AAGAATGGGAACTTCGTGGCACCTACACTGTGGACA...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp TATAAGACTTCAAAGAAATCGCTCCCTTGCTTCTGTGACTTCTATGTCTTTTACCAGGCAGATCCATCATaGAGAAAGGAGCACCCCGAA +
Preference number: 4 (lower is better)
Translates to: YKTSKKSLPCFCDFYVFYQADPS*RKEHPE
Trigger: TTCGGGGTGCTCCTTTCTGCATGATGGATCTGCCTG...GTAAAAGACATAGAAGTCACAGAAGCAAGGGAGCGATTTCTTTGAAGTCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp CTAGTAAAGAACTGTGTTACCTCTCCTGAAAGAGAAACACTGCTTCACATCATCCCAGCATGTGCCCACTaGAAATACTTCATGACGGTT +
Preference number: 4 (lower is better)
Translates to: LVKNCVTSPERETLLHIIPACAH*KYFMTV
Trigger: AACCGTCATGAAGTATTTCCAGTGGGCACATGCTGG...GATGATGTGAAGCAGTGTTTCTCTTTCAGGAGAGGTAACACAGTTCTTTACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
3UTR CAA 72 bp GCCTGGTCTTATTGTAGCATGTTATGCTGTATTTGGTaGATGTCTCTGGAAGAACTGTACTTTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AWSYCSMLCCIW*MSLEELYFSEG
Trigger: CCCCTCAGAAAAGTACAGTTCTTCCAGAGACATCAACCAAATACAGCATAACATGCTACAATAAGACCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp TGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCATGCTTTGCCTCCAATTGTTATCTAATTCATaGTTCACACAAGCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: CTQHSMDDLALVPMLCLQLLSNS*FTQAQE
Trigger: CTCTTGGGCTTGTGTGAATCATGAATTAGATAACAA...TTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp CTAGTAAAGAACTGTGTTACCTCTCCTGAAAGAGAAACACTGCTTCACATCATCACTGGAAATACTTCATaGCGGTTACAAGCACCCGTA +
Preference number: 4 (lower is better)
Translates to: LVKNCVTSPERETLLHIITGNTS*RLQAPV
Trigger: TACGGGTGCTTGTAACCGTCATGAAGTATTTCCAGT...GATGATGTGAAGCAGTGTTTCTCTTTCAGGAGAGGTAACACAGTTCTTTACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ACTAGAAGTCAGCTGTCCCTTTCCCTGCAGTTAATCTCATGGCATCTGAGTTATGTCATTTTCAGATCATaGGCCAATTCCAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: TRSQLSLSLQLISWHLSYVIFRS*ANSKKC
Trigger: ACACTTCTTGGAATTGGCTCATGATCTGAAAATGAC...ATAACTCAGATGCCATGAGATTAACTGCAGGGAAAGGGACAGCTGACTTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGCCCACTTTGAACTTCTaGGATGATCTGGAAGCTTAC +
Preference number: 4 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLPTLNF*DDLEAY
Trigger: GTAAGCTTCCAGATCATCTCAGAAGTTCAAAGTGGG...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTGCAGTAGTGATGATTTaGACATCCAATCAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGAVVMI*TSNQVS
Trigger: TGAAACTTGATTGGATGTTCAAATCATCACTACTGC...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCGACTTTAGCCTCCCGTaGATAAATTCTCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPDFSLP*INSLWC
Trigger: ACACCACAGAGAATTTATTCACGGGAGGCTAAAGTC...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGCATCATGACTGCCAATaGTGGCATCAAAGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLHHDCQ*WHQRVC
Trigger: ACACACTCTTTGATGCCATCATTGGCAGTCATGATG...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp TATAAGACTTCAAAGAAATCGCTCCCTTGCTTCTGTGACTTCTATGTCTTTTACTATGCGAATTCTGTCTaGCTGGCGAATCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YKTSKKSLPCFCDFYVFYYANSV*LANLLE
Trigger: CTCCAGCAGATTCGCCAGGCAGACAGAATTCGCATA...GTAAAAGACATAGAAGTCACAGAAGCAAGGGAGCGATTTCTTTGAAGTCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGGTTTGCAATCTCAGCTaGATGCCTACTGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: THIERNLSWKMNMRLEAEVCNLS*MPTAIP
Trigger: AGGAATGGCAGTAGGCATGCAGCTGAGATTGCAAAC...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTTCTGGAAGCTTACACTaGCACGGCTTCCTCTCTTAC +
Preference number: 4 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFSGSLH*HGFLSY
Trigger: GTAAGAGAGGAAGCCGTGCCAGTGTAAGCTTCCAGA...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGACTTCTGAGATGATCTaGAAGCTTACACTGGCACGG +
Preference number: 4 (lower is better)
Translates to: THIERNLSWKMNMRLEAETSEMI*KLTLAR
Trigger: CCGTGCCAGTGTAAGCTTCCAGATCATCTCAGAAGT...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ACTAGAAGTCAGCTGTCCCTTTCCCTGCAGTTAATCTCATGGCATCTGAGTTATAAAATTCTGACACGATaGCAAACATCCCCGAATCAT +
Preference number: 4 (lower is better)
Translates to: TRSQLSLSLQLISWHLSYKILTR*QTSPNH
Trigger: ATGATTCGGGGATGTTTGCCATCGTGTCAGAATTTT...ATAACTCAGATGCCATGAGATTAACTGCAGGGAAAGGGACAGCTGACTTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp CTAGTAAAGAACTGTGTTACCTCTCCTGAAAGAGAAACACTGCTTCACATCATCCCTTCACTCAGAGTTTaGAGAATTGTTACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LVKNCVTSPERETLLHIIPSLRV*RIVTVL
Trigger: CAGCACAGTAACAATTCTTCAAACTCTGAGTGAAGG...GATGATGTGAAGCAGTGTTTCTCTTTCAGGAGAGGTAACACAGTTCTTTACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGGGGTTGACATTTTCATaGCGCAGGTCCTTCATCATT +
Preference number: 4 (lower is better)
Translates to: THIERNLSWKMNMRLEAEGLTFS*RRSFII
Trigger: AATGATGAAGGACCTGCGGCATGAAAATGTCAACCC...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTCACCAACTGCCTCTCTaGTTTTCTCCTTTGGAATGC +
Preference number: 4 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFHQLPL*FSPLEC
Trigger: GCATTCCAAAGGAGAAAAGCAGAGAGGCAGTTGGTG...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGTCCCCCAATCAAGGCTaGATGCATACACATTATGAT +
Preference number: 4 (lower is better)
Translates to: THIERNLSWKMNMRLEAESPNQG*MHTHYD
Trigger: ATCATAATGTGTATGCATTCAGCCTTGATTGGGGGA...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp TATAAGACTTCAAAGAAATCGCTCCCTTGCTTCTGTGACTTCTATGTCTTTTACTCGAGAACAAAATTCTaGCACGATGGCAAACATCCC +
Preference number: 4 (lower is better)
Translates to: YKTSKKSLPCFCDFYVFYSRTKF*HDGKHP
Trigger: GGGATGTTTGCCATCGTGTCAGAATTTTGTTCTCGA...GTAAAAGACATAGAAGTCACAGAAGCAAGGGAGCGATTTCTTTGAAGTCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp TATAAGACTTCAAAGAAATCGCTCCCTTGCTTCTGTGACTTCTATGTCTTTTACAATGACCCCAGCATGTaGCCACTGGAAATACTTCAT +
Preference number: 4 (lower is better)
Translates to: YKTSKKSLPCFCDFYVFYNDPSM*PLEILH
Trigger: ATGAAGTATTTCCAGTGGGCACATGCTGGGGTCATT...GTAAAAGACATAGAAGTCACAGAAGCAAGGGAGCGATTTCTTTGAAGTCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTTTGTTTCGCACCAACTaGCTCTCTGCTTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFLFRTN*LSAFLL
Trigger: AAGGAGAAAAGCAGAGAGGCAGTTGGTGCGAAACAA...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTCACTTGAGACTCGATTaGCTGTATGCATCCAAATGT +
Preference number: 4 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFHLRLD*LYASKC
Trigger: ACATTTGGATGCATACAGCCAATCGAGTCTCAAGTG...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCTGTAGGCATCTCCAATaGTCTCTACTTTATAGACAT +
Preference number: 4 (lower is better)
Translates to: ISIECCTQHSMDDLALVPCRHLQ*SLLYRH
Trigger: ATGTCTATAAAGTAGAGACCATTGGAGATGCCTACA...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR TCA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGTCTTTATCAACTGGTTaGATCCATAGAACTGCATGT +
Preference number: 4 (lower is better)
Translates to: THIERNLSWKMNMRLEAESLSTG*IHRTAC
Trigger: ACATGCAGTTCTATGGATTCAACCAGTTGATAAAGA...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR GCA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGTTCAAACACATCACTTaGACTCGATTTGATAGACTT +
Preference number: 4 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLFKHIT*TRFDRL
Trigger: AAGTCTATCAAATCGAGTGCAAGTGATGTGTTTGAA...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CCA 90 bp TATAAGACTTCAAAGAAATCGCTCCCTTGCTTCTGTGACTTCTATGTCTTTTACCCCATTCTTTCCCATTaGTGTCCAGGATTACATATT +
Preference number: 4 (lower is better)
Translates to: YKTSKKSLPCFCDFYVFYPILSH*CPGLHI
Trigger: AATATGTAATCCTGGACACCAATGGGAAAGAATGGG...GTAAAAGACATAGAAGTCACAGAAGCAAGGGAGCGATTTCTTTGAAGTCTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 90 bp TGGCTGTCTCGTCCCGAGGTCAGGACGACCCCTACAGGTAGGCCCTaGCTCCGAAGAGCACTTGAGACTCGATTGGCTGTATGCATCCAA +
Preference number: 5 (lower is better)
Translates to: WLSRPEVRTTPTGRP*LRRALETRLAVCIQ
Trigger: TTGGATGCATACAGCCAATCGAGTCTCAAGTGCTCTTCGGAGCCAGGGCCTACCTGTAGGGGTCGTCCTGACCTCGGGACGAGACAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 90 bp ACAAGCCCAAGAGAAAATCCCTTTGTCCCAGCTGGTTCCCAGGAGTaGGGCTGCCTCGCAGAAGCCAGGGTTGGCAGGCCCAACAAATCC +
Preference number: 5 (lower is better)
Translates to: TSPRENPFVPAGSQE*GCLAEARVGRPNKS
Trigger: GGATTTGTTGGGCCTGCCAACCCTGGCTTCTGCGAGGCAGCCTCACTCCTGGGAACCAGCTGGGACAAAGGGATTTTCTCTTGGGCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 90 bp ACTTGGAGGAAGGGAGGCCATGCTGTCCTGACAGTCTGCTGGAAATaGCAAACCAGGACAGAAGGCGAGAAAAAGGCCAGGGTCCGAGGA +
Preference number: 5 (lower is better)
Translates to: TWRKGGHAVLTVCWK*QTRTEGEKKARVRG
Trigger: TCCTCGGACCCTGGCCTTTTTCTCGCCTTCTGTCCTGGTTTGCCATTTCCAGCAGACTGTCAGGACAGCATGGCCTCCCTTCCTCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 90 bp ATTATGCGAATTCTGTCTGCCTGGCGAATCTGCTGGAGAGCTTTCTaGATGCTCTGGCTGTCTCGTCCCGAGGTCAGGACGACCCCTACA +
Preference number: 5 (lower is better)
Translates to: IMRILSAWRICWRAF*MLWLSRPEVRTTPT
Trigger: TGTAGGGGTCGTCCTGACCTCGGGACGAGACAGCCAGAGCATTCAGAAAGCTCTCCAGCAGATTCGCCAGGCAGACAGAATTCGCATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS GCA 90 bp CATGGCCAAGGCAGGGTCAATACCTCCTTGGCAGATCTTCCTTTCTaGAAACCAGCATTTTGCATCTGCACTAGTAGGTCTGCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: HGQGRVNTSLADLPF*KPAFCICTSRSAAR
Trigger: CCTGGCGGCAGACCTACTAGTGCAGATGCAAAATGCTGGTTTGCAGAAAGGAAGATCTGCCAAGGAGGTATTGACCCTGCCTTGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp ATGAACAAAACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATCCCACTTGCCCATCTTaGCCCACTGGTGGGGGTACA +
Preference number: 5 (lower is better)
Translates to: MNKTYGQSSFPGDSIHWDPTCPS*PTGGGT
Trigger: TGTACCCCCACCAGTGGGCAAAGATGGGCAAGTGGG...ATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS GCA 90 bp ATTTCATCAAAAGTTGGTCGCTGTTCTGACGCCTCAGCCCAGCACTaGTTCATCAGCTGGAGACATTCTGCAGGGGCATACTCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: ISSKVGRCSDASAQH*FISWRHSAGAYSGE
Trigger: TTCTCCTGAGTATGCCCCTGCAGAATGTCTCCAGCTGATGAAGCAGTGCTGGGCTGAGGCGTCAGAACAGCGACCAACTTTTGATGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 90 bp AACCAGCATTTTGCATCTGCACTAGTAGGTCTGCCGCCAGGGAAATaGATTGGGGTCCCTCTGAACCTTAGCAGTTCAGTTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: NQHFASALVGLPPGK*IGVPLNLSSSVSMS
Trigger: GGACATGGAAACTGAACTGCTAAGGTTCAGAGGGACCCCAATTCATTTCCCTGGCGGCAGACCTACTAGTGCAGATGCAAAATGCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 90 bp AAGAAAAGGACAGCCTTGGGGACCTCCCACTTTGAACTTCTGAGATaGTCTGGAAGCTTACACTGGCACGGCTTCCTCTCTTACTGCCAA +
Preference number: 5 (lower is better)
Translates to: KKRTALGTSHFELLR*SGSLHWHGFLSYCQ
Trigger: TTGGCAGTAAGAGAGGAAGCCGTGCCAGTGTAAGCTTCCAGATCATCTCAGAAGTTCAAAGTGGGAGGTCCCCAAGGCTGTCCTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 90 bp GTTAGACTACCTGAAGAAAAGGACAGCCTTGGGGACCTCCCACTTTaGACTTCTGAGATGATCTGGAAGCTTACACTGGCACGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: VRLPEEKDSLGDLPL*TSEMIWKLTLARLP
Trigger: AGGAAGCCGTGCCAGTGTAAGCTTCCAGATCATCTCAGAAGTTCAAAGTGGGAGGTCCCCAAGGCTGTCCTTTTCTTCAGGTAGTCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp TGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCATGCTTTGCCTCCAAAGGCTTCCCGGAGCTTaGGATTGTTCCTCAGGACCT +
Preference number: 5 (lower is better)
Translates to: CTQHSMDDLALVPMLCLQRLPGA*DCSSGP
Trigger: AGGTCCTGAGGAACAATCCAAAGCTCCGGGAAGCCT...TTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp GAAAAGAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATGACCAAGCCATGGCCCACTaGCCCATCTTTGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: EKRDLFSSSKLTTLLWNDQAMAH*PIFAHW
Trigger: CCAGTGGGCAAAGATGGGCAAGTGGGCCATGGCTTG...GTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 90 bp ATCCAAATGTCTTCATCTGAGGAAATGACCCCAGCATGTGCCCACTaGAAATACTTCATGACGGTTACAAGCACCCGTATCGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: IQMSSSEEMTPACAH*KYFMTVTSTRIGEG
Trigger: CCCTTCTCCGATACGGGTGCTTGTAACCGTCATGAAGTATTTCCAGTGGGCACATGCTGGGGTCATTTCCTCAGATGAAGACATTTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp TGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCATGCTTTGCCTCCAAGGCTCCGAAGAGCACTaGAGACTCGATTGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: CTQHSMDDLALVPMLCLQGSEEH*RLDWLY
Trigger: ATACAGCCAATCGAGTCTCAAGTGCTCTTCGGAGCC...TTGGAGGCAAAGCATGGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCCTACTGCCATTCCTCTaGGGAAGGCCTGAGGCCACC +
Preference number: 5 (lower is better)
Translates to: ISIECCTQHSMDDLALVPLLPFL*GRPEAT
Trigger: GGTGGCCTCAGGCCTTCCCAAGAGGAATGGCAGTAG...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGAGGTATGGTAGCCCTGTaGATTCCATTCGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGGMVAL*IPFEKL
Trigger: CAGCTTCTCGAATGGAATCAACAGGGCTACCATACC...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTTCTGTGCCTTTGCCCTaGAGCTCTGTTCTTCCACGA +
Preference number: 5 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGSVPLP*SSVLPR
Trigger: TCGTGGAAGAACAGAGCTCAAGGGCAAAGGCACAGA...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp ATGAACAAAACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATGTCTCCTCTGTGCCTTaGCCCTTGAGCTCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: MNKTYGQSSFPGDSIHWDVSSVP*PLSSVL
Trigger: AAGAACAGAGCTCAAGGGCAAAGGCACAGAGGAGAC...ATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGTCGCAGAAGCCAGGGTaGGCAGGCCCAACAAATCCT +
Preference number: 5 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLSQKPG*AGPTNP
Trigger: AGGATTTGTTGGGCCTGCCAACCCTGGCTTCTGCGA...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTAGGGTCAATACCTCCTaGGCAGATCTTCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGRVNTS*ADLPFC
Trigger: GCAGAAAGGAAGATCTGCCAAGGAGGTATTGACCCT...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTAAGAAAAGGACAGCCTaGGGGACCTCCCACTTTGAA +
Preference number: 5 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGKKRTA*GTSHFE
Trigger: TTCAAAGTGGGAGGTCCCCAAGGCTGTCCTTTTCTT...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGACTGTCTATGATTTCTTaGGCAGGCAGATCCATCATG +
Preference number: 5 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGLSMIS*AGRSIM
Trigger: CATGATGGATCTGCCTGCCAAAGAAATCATAGACAG...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp ATGAACAAAACCTATGGGCAAAGTTCCTTCCCAGGAGACTCCATACACTGGGATACTGTACAGCCCTTCTaGAGGGATTCAGCAACTGAT +
Preference number: 5 (lower is better)
Translates to: MNKTYGQSSFPGDSIHWDTVQPF*RDSATD
Trigger: ATCAGTTGCTGAATCCCTCAAGAAGGGCTGTACAGT...ATCCCAGTGTATGGAGTCTCCTGGGAAGGAACTTTGCCCATAGGTTTTGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCAAACATCTCAGGAACTaGGAGGAAGGGAGGCCATGC +
Preference number: 5 (lower is better)
Translates to: ISIECCTQHSMDDLALVPKHLRN*EEGRPC
Trigger: GCATGGCCTCCCTTCCTCCAAGTTCCTGAGATGTTT...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 90 bp CCATGTCCACAGTGTAGGTGCCACGAAGTTCCCATTCTTTCCCATTaGTGTCCAGGATTACATATTCAGAAATCCCATTTCCATTTGAGT +
Preference number: 5 (lower is better)
Translates to: PCPQCRCHEVPILSH*CPGLHIQKSHFHLS
Trigger: ACTCAAATGGAAATGGGATTTCTGAATATGTAATCCTGGACACCAATGGGAAAGAATGGGAACTTCGTGGCACCTACACTGTGGACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp GAAAAGAGAGACCTCTTTTCTTCATCCAAGTTGACCACGCTACTTTGGAATGACACGGTGAAACTTGGTTaGAGTCAGGCTTCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: EKRDLFSSSKLTTLLWNDTVKLG*SQASQE
Trigger: TTCCTGAGAAGCCTGACTCAAACCAAGTTTCACCGT...GTCATTCCAAAGTAGCGTGGTCAACTTGGATGAAGAAAAGAGGTCTCTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp CTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGCAGTCAGAAGGAAGGGGAATCAAATCTTCCAAGTaGCTAGAATACTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: LSWKMNMRLEAEQSEGRGIKSSK*LEYCSN
Trigger: GTTGGAGCAGTATTCTAGCAACTTGGAAGATTTGAT...TCCCCTTCCTTCTGACTGCTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp TTAGGGTTAGGATTACAGTTATGTACCACCACATCTGACTGGCATACTGGGGGTGCCTTCACTCAGAGTTaGAAGAATTGTTACTGTGCT +
Preference number: 5 (lower is better)
Translates to: LGLGLQLCTTTSDWHTGGAFTQS*KNCYCA
Trigger: AGCACAGTAACAATTCTTCAAACTCTGAGTGAAGGC...ACCCCCAGTATGCCAGTCAGATGTGGTGGTACATAACTGTAATCCTAACCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTTGCAATCTCTGCTGGTaGCAAGCCATGGCCCACTTG +
Preference number: 5 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFCNLCW*QAMAHL
Trigger: CAAGTGGGCCATGGCTTGCAACCAGCAGAGATTGCA...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 90 bp AGTGTCCGAGAGAAGGTTGGGAAGCTATGTTTGTTATCTAATTCATaGTTCACACAAGCCCAAGAGAAAATCCCTTTGTCCCAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: SVREKVGKLCLLSNS*FTQAQEKIPLSQLV
Trigger: AACCAGCTGGGACAAAGGGATTTTCTCTTGGGCTTGTGTGAATCATGAATTAGATAACAAACATAGCTTCCCAACCTTCTCTCGGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp CTCCTGAAAGAGAAACACTGCTTCACATCATCTCTTATTCTAGAAGGAAAGTTTAACTGGCGAGGGCCTTaGAAGTCTGACAGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: LLKEKHCFTSSLILEGKFNWRGP*KSDSLR
Trigger: ACGAAGACTGTCAGACTTCAAAGGCCCTCGCCAGTT...AAACTTTCCTTCTAGAATAAGAGATGATGTGAAGCAGTGTTTCTCTTTCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGCTCTGCTTTTCTCCTTaGGAATGCTGCAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLLCFSP*ECCNLC
Trigger: GCAGAGATTGCAGCATTCCAAAGGAGAAAAGCAGAG...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGTTCCAAGAAGTGTGTTaGTGTCTCTCCCCCAATCAA +
Preference number: 5 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLFQEVC*CLSPNQ
Trigger: TTGATTGGGGGAGAGACACAAACACACTTCTTGGAA...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp TATAAGACTTCAAAGAAATCGCTCCCTTGCTTCTGTGACTTCTATGTCTTTTACGCACTTGAGACTCGATaGGCTGTATGCATCCAAATG +
Preference number: 5 (lower is better)
Translates to: YKTSKKSLPCFCDFYVFYALETR*AVCIQM
Trigger: CATTTGGATGCATACAGCCAATCGAGTCTCAAGTGC...GTAAAAGACATAGAAGTCACAGAAGCAAGGGAGCGATTTCTTTGAAGTCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp AGTCAAGTTATAGTGCTTAGAAGAGGTAGTCATCAGTTATCTCCGTCTACTCTGAGTCACCCTCATAGATaGCTATGTTGGAGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: SQVIVLRRGSHQLSPSTLSHPHR*LCWSSH
Trigger: ATGAGAACTCCAACATAGCAATCTATGAGGGTGACT...CAGAGTAGACGGAGATAACTGATGACTACCTCTTCTAAGCACTATAACTTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp ATATCAATAGAATGCTGTACCCAACATTCTATGGATGACTTAGCACTAGTGCCCATATTTCATCAAAAGTaGGTCGCTGTTCTGACGCCT +
Preference number: 5 (lower is better)
Translates to: ISIECCTQHSMDDLALVPIFHQK*VAVLTP
Trigger: AGGCGTCAGAACAGCGACCAACTTTTGATGAAATAT...GGGCACTAGTGCTAAGTCATCCATAGAATGTTGGGTACAGCATTCTATTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 90 bp CCCATTGGTGTCCAGGATTACATATTCAGAAATCCCATTTCCATTTaGGTCTGTCTTTATCAACTGGTTGAATCCATAGAACTGCATGTT +
Preference number: 5 (lower is better)
Translates to: PIGVQDYIFRNPISI*VCLYQLVESIELHV
Trigger: AACATGCAGTTCTATGGATTCAACCAGTTGATAAAGACAGACTCAAATGGAAATGGGATTTCTGAATATGTAATCCTGGACACCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS-3UTR CAA 90 bp ACACATATTGAAAGGAATCTCTCTTGGAAAATGAATATGAGGTTGGAGGCAGAGAGCAGTAGTGATGATTaGAACATCCAATCAAGTTTC +
Preference number: 5 (lower is better)
Translates to: THIERNLSWKMNMRLEAESSSDD*NIQSSF
Trigger: GAAACTTGATTGGATGTTCAAATCATCACTACTGCT...CTCTGCCTCCAACCTCATATTCATTTTCCAAGAGAGATTCCTTTCAATATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 72 bp AGAGAAAATCCCTTTGTCCCAGCTGGTTCCCAGGAGTaGGGCTGCCTCGCAGAAGCCAGGGTTGGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: RENPFVPAGSQE*GCLAEARVGRP
Trigger: GGGCCTGCCAACCCTGGCTTCTGCGAGGCAGCCTCACTCCTGGGAACCAGCTGGGACAAAGGGATTTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp CGTCCCGAGGTCAGGACGACCCCTACAGGTAGGCCCTaGCTCCGAAGAGCACTTGAGACTCGATTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: RPEVRTTPTGRP*LRRALETRLAV
Trigger: TACAGCCAATCGAGTCTCAAGTGCTCTTCGGAGCCAGGGCCTACCTGTAGGGGTCGTCCTGACCTCGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 72 bp CTCGCAGAAGCCAGGGTTGGCAGGCCCAACAAATCCTaGGGCCATCTGCTGGTGGGAAATGAAACTGGCGAG +
Preference number: 6 (lower is better)
Translates to: LAEARVGRPNKS*GHLLVGNETGE
Trigger: CTCGCCAGTTTCATTTCCCACCAGCAGATGGCCTCAGGATTTGTTGGGCCTGCCAACCCTGGCTTCTGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 72 bp ATTCTGTCTGCCTGGCGAATCTGCTGGAGAGCTTTCTaGATGCTCTGGCTGTCTCGTCCCGAGGTCAGGACG +
Preference number: 6 (lower is better)
Translates to: ILSAWRICWRAF*MLWLSRPEVRT
Trigger: CGTCCTGACCTCGGGACGAGACAGCCAGAGCATTCAGAAAGCTCTCCAGCAGATTCGCCAGGCAGACAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp GGGTTGGCAGGCCCAACAAATCCTGAGGCCATCTGCTaGTGGGAAATGAAACTGGCGAGGGCCTTTGAAGTC +
Preference number: 6 (lower is better)
Translates to: GLAGPTNPEAIC*WEMKLARAFEV
Trigger: GACTTCAAAGGCCCTCGCCAGTTTCATTTCCCACCAGCAGATGGCCTCAGGATTTGTTGGGCCTGCCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp TCACACAAGCCCAAGAGAAAATCCCTTTGTCCCAGCTaGTTCCCAGGAGTGAGGCTGCCTCGCAGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: SHKPKRKSLCPS*FPGVRLPRRSQ
Trigger: CTGGCTTCTGCGAGGCAGCCTCACTCCTGGGAACCAGCTGGGACAAAGGGATTTTCTCTTGGGCTTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS GCA 72 bp AAAGTTGGTCGCTGTTCTGACGCCTCAGCCCAGCACTaGTTCATCAGCTGGAGACATTCTGCAGGGGCATAC +
Preference number: 6 (lower is better)
Translates to: KVGRCSDASAQH*FISWRHSAGAY
Trigger: GTATGCCCCTGCAGAATGTCTCCAGCTGATGAAGCAGTGCTGGGCTGAGGCGTCAGAACAGCGACCAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp AAGGGAGGCCATGCTGTCCTGACAGTCTGCTGGAAATaGCAAACCAGGACAGAAGGCGAGAAAAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: KGGHAVLTVCWK*QTRTEGEKKAR
Trigger: CCTGGCCTTTTTCTCGCCTTCTGTCCTGGTTTGCCATTTCCAGCAGACTGTCAGGACAGCATGGCCTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp GCAAAAGGGCCAAGAGGCACAAACATCTCAGGAACTTaGAGGAAGGGAGGCCATGCTGTCCTGACAGTCTGC +
Preference number: 6 (lower is better)
Translates to: AKGPRGTNISGT*RKGGHAVLTVC
Trigger: GCAGACTGTCAGGACAGCATGGCCTCCCTTCCTCCAAGTTCCTGAGATGTTTGTGCCTCTTGGCCCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp TTGCAAGCCATGGCCCACTTGCCCATCTTTGCCCACTaGTGGGGGTACAGGAAGAGGTTTGGTGAAACCCTT +
Preference number: 6 (lower is better)
Translates to: LQAMAHLPIFAH*WGYRKRFGETL
Trigger: AAGGGTTTCACCAAACCTCTTCCTGTACCCCCACCAGTGGGCAAAGATGGGCAAGTGGGCCATGGCTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CAA 90 bp AGGTCAGGACGACCCCTACAGGTAGGCCCTGGCTCCGAAGAGCACTaGAGACTCGATTGGCTGTATGCATCCAAATGTCTTCATCTGAGG +
Preference number: 6 (lower is better)
Translates to: RSGRPLQVGPGSEEH*RLDWLYASKCLHLR
Trigger: CCTCAGATGAAGACATTTGGATGCATACAGCCAATCGAGTCTCAAGTGCTCTTCGGAGCCAGGGCCTACCTGTAGGGGTCGTCCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp CAAGCCATGGCCCACTTGCCCATCTTTGCCCACTGGTaGGGGTACAGGAAGAGGTTTGGTGAAACCCTTTTT +
Preference number: 6 (lower is better)
Translates to: QAMAHLPIFAHW*GYRKRFGETLF
Trigger: AAAAAGGGTTTCACCAAACCTCTTCCTGTACCCCCACCAGTGGGCAAAGATGGGCAAGTGGGCCATGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CAA 72 bp CGACCCCTACAGGTAGGCCCTGGCTCCGAAGAGCACTaGAGACTCGATTGGCTGTATGCATCCAAATGTCTT +
Preference number: 6 (lower is better)
Translates to: RPLQVGPGSEEH*RLDWLYASKCL
Trigger: AAGACATTTGGATGCATACAGCCAATCGAGTCTCAAGTGCTCTTCGGAGCCAGGGCCTACCTGTAGGGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 72 bp ACAGCCTTGGGGACCTCCCACTTTGAACTTCTGAGATaGTCTGGAAGCTTACACTGGCACGGCTTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: TALGTSHFELLR*SGSLHWHGFLS
Trigger: AGAGAGGAAGCCGTGCCAGTGTAAGCTTCCAGATCATCTCAGAAGTTCAAAGTGGGAGGTCCCCAAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS GCA 72 bp AGGCTTCTCAGGAATTTCTCCGCGGGCTGCTGCTTCTaGATAGGCTTCGTAGAAGGTCTTTTCATGGGACTC +
Preference number: 6 (lower is better)
Translates to: RLLRNFSAGCCF*IGFVEGLFMGL
Trigger: GAGTCCCATGAAAAGACCTTCTACGAAGCCTATGCAGAAGCAGCAGCCCGCGGAGAAATTCCTGAGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CAA 72 bp TGCTTTTCTCCTTTGGAATGCTGCAATCTCTGCTGGTaGCAAGCCATGGCCCACTTGCCCATCTTTGCCCAC +
Preference number: 6 (lower is better)
Translates to: CFSPLECCNLCW*QAMAHLPIFAH
Trigger: GTGGGCAAAGATGGGCAAGTGGGCCATGGCTTGCAACCAGCAGAGATTGCAGCATTCCAAAGGAGAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp AATAGTCAACACAGCATCATAGGCTTCCCGGAGCTTTaGATTGTTCCTCAGGACCTGGTAGGGGCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: NSQHSIIGFPEL*IVPQDLVGAVL
Trigger: AAGCACAGCCCCTACCAGGTCCTGAGGAACAATCCAAAGCTCCGGGAAGCCTATGATGCTGTGTTGACTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 72 bp CGAAGGAGTAACTCCTGTCAAATGTCTTGTCCCGGCTaGTTCGCTCAATTGCTAAAGCAGCAGCAACCTCAG +
Preference number: 6 (lower is better)
Translates to: RRSNSCQMSCPG*FAQLLKQQQPQ
Trigger: CTGAGGTTGCTGCTGCTTTAGCAATTGAGCGAATCAGCCGGGACAAGACATTTGACAGGAGTTACTCCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 72 bp TTTGCATCTGCACTAGTAGGTCTGCCGCCAGGGAAATaGATTGGGGTCCCTCTGAACCTTAGCAGTTCAGTT +
Preference number: 6 (lower is better)
Translates to: FASALVGLPPGK*IGVPLNLSSSV
Trigger: AACTGAACTGCTAAGGTTCAGAGGGACCCCAATTCATTTCCCTGGCGGCAGACCTACTAGTGCAGATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp GTAGGCCCTGGCTCCGAAGAGCACTTGAGACTCGATTaGCTGTATGCATCCAAATGTCTTCATCTGAGGAAA +
Preference number: 6 (lower is better)
Translates to: VGPGSEEHLRLD*LYASKCLHLRK
Trigger: TTTCCTCAGATGAAGACATTTGGATGCATACAGCCAATCGAGTCTCAAGTGCTCTTCGGAGCCAGGGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS GCA 72 bp ACCTTAGCAGTTCAGTTTCCATGTCCACAGTGTAGGTaGCACGAAGTTCCCATTCTTTCCCATTGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: TLAVQFPCPQCR*HEVPILSHWCP
Trigger: TGGACACCAATGGGAAAGAATGGGAACTTCGTGGCACCTACACTGTGGACATGGAAACTGAACTGCTAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS GCA 72 bp GGCAGGGTCAATACCTCCTTGGCAGATCTTCCTTTCTaGAAACCAGCATTTTGCATCTGCACTAGTAGGTCT +
Preference number: 6 (lower is better)
Translates to: GRVNTSLADLPF*KPAFCICTSRS
Trigger: AGACCTACTAGTGCAGATGCAAAATGCTGGTTTGCAGAAAGGAAGATCTGCCAAGGAGGTATTGACCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CAA 90 bp AAGGTGACCAAGTCAAATCCCTCAGGTTCAACTGTACAGCCCTTCTaGAGGGATTCAGCAACTGATAGTGGTAGCATCTGTGTTAGAAGC +
Preference number: 6 (lower is better)
Translates to: KVTKSNPSGSTVQPF*RDSATDSGSICVRS
Trigger: GCTTCTAACACAGATGCTACCACTATCAGTTGCTGAATCCCTCAAGAAGGGCTGTACAGTTGAACCTGAGGGATTTGACTTGGTCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CAA 72 bp AATTGTAGATGGTTCCAAACAACGGTGAAACTTGGTTaGAGTCAGGCTTCTCAGGAATTTCTCCGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: NCRWFQTTVKLG*SQASQEFLRGL
Trigger: CAGCCCGCGGAGAAATTCCTGAGAAGCCTGACTCAAACCAAGTTTCACCGTTGTTTGGAACCATCTACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CAA 72 bp AAGTCAAATCCCTCAGGTTCAACTGTACAGCCCTTCTaGAGGGATTCAGCAACTGATAGTGGTAGCATCTGT +
Preference number: 6 (lower is better)
Translates to: KSNPSGSTVQPF*RDSATDSGSIC
Trigger: ACAGATGCTACCACTATCAGTTGCTGAATCCCTCAAGAAGGGCTGTACAGTTGAACCTGAGGGATTTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS TCA 72 bp ACATCCCCGAATCATAGAAGAAACCCAATAGAGGGTTaGCATTTTCATGCCGCAGGTCCTTCATCATTTCAA +
Preference number: 6 (lower is better)
Translates to: TSPNHRRNPIEG*HFHAAGPSSFQ
Trigger: TTGAAATGATGAAGGACCTGCGGCATGAAAATGTCAACCCTCTATTGGGTTTCTTCTATGATTCGGGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CCA 72 bp CTTCTAGGCTCCTTCGAGAACAAAATTCTGACACGATaGCAAACATCCCCGAATCATAGAAGAAACCCAATA +
Preference number: 6 (lower is better)
Translates to: LLGSFENKILTR*QTSPNHRRNPI
Trigger: TATTGGGTTTCTTCTATGATTCGGGGATGTTTGCCATCGTGTCAGAATTTTGTTCTCGAAGGAGCCTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CAA 90 bp TGGGGATTAATAAATGTCACATCTTCCAAAGTCAGTAGGATTCTGTaGGGTCCTTTAATCAACTGGATTTTATTTATACGTCGCCTTATA +
Preference number: 6 (lower is better)
Translates to: WGLINVTSSKVSRIL*GPLINWILFIRRLI
Trigger: TATAAGGCGACGTATAAATAAAATCCAGTTGATTAAAGGACCCAACAGAATCCTACTGACTTTGGAAGATGTGACATTTATTAATCCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4
CDS CAA 90 bp TGTAAGTATTTCATCCCCTTGATGAGGTCAAGCAGTAGTGATGATTaGAACATCCAATCAAGTTTCACATCATCATTTGTAAGTATGTCT +
Preference number: 6 (lower is better)
Translates to: CKYFIPLMRSSSSDD*NIQSSFTSSFVSMS
Trigger: AGACATACTTACAAATGATGATGTGAAACTTGATTGGATGTTCAAATCATCACTACTGCTTGACCTCATCAAGGGGATGAAATACTTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042530.4