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Pregenerated sensors for GTSF2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053508

Ensembl transcript IDs: ENSMUST00000065978.9, ENSMUST00000229158.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGCTGTTAGGATaGTTATCAGCCATAGCCTCTTGTAGGTCTCTCGAGTCACTCTCA +
Preference number: 1 (lower is better)
Translates to: HQFFCPLPQDLKLLG*LSAIASCRSLESLS
Trigger: TGAGAGTGACTCGAGAGACCTACAAGAGGCTATGGCTGATAAGCATCCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
3UTR CAA 90 bp AATTGGCAATGTCTCCATCAGTTTTTCTGCCCTCTTCCCCAAGACTaGAAGCTGTTAGGATGCTTATCAGCCATAGCCTCTTGTAGGTCT +
Preference number: 2 (lower is better)
Translates to: NWQCLHQFFCPLPQD*KLLGCLSAIASCRS
Trigger: AGACCTACAAGAGGCTATGGCTGATAAGCATCCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATGGAGACATTGCCAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
3UTR GCA 72 bp TTCTGCCCTCTTCCCCAAGACTTGAAGCTGTTAGGATaGTTATCAGCCATAGCCTCTTGTAGGTCTCTCGAG +
Preference number: 3 (lower is better)
Translates to: FCPLPQDLKLLG*LSAIASCRSLE
Trigger: CTCGAGAGACCTACAAGAGGCTATGGCTGATAAGCATCCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR CCA 90 bp GCAATGTCTCCATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGCTGTTAGGGGTACTGTAACCTGCTaGCAGGTATCCTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: AMSPSVFLPSSPRLEAVRGTVTC*QVSCGL
Trigger: CAAACCACAGGATACCTGCCAGCAGGTTACAGTACC...CCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATGGAGACATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR TCA 90 bp CATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGCTGTTAGGATGCTTATCATCAGGGTCAGGAAATTaGCTCCCAGCACTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HQFFCPLPQDLKLLGCLSSGSGN*LPALEK
Trigger: CTTCTCCAGTGCTGGGAGTCAATTTCCTGACCCTGA...TGATAAGCATCCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR GCA 90 bp CAATGTCTCCATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGCTGTTAGGAGATGGTACTGTAACCTaGTGGCAGGTATCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QCLHQFFCPLPQDLKLLGDGTVT*WQVSCG
Trigger: ACCACAGGATACCTGCCAGCAGGTTACAGTACCATC...TCCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATGGAGACATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR CCA 90 bp GCAATGTCTCCATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGCTGTTAGGTTGCATGATGCCAGATaGTACTGTAACCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AMSPSVFLPSSPRLEAVRLHDAR*YCNLLA
Trigger: TGCCAGCAGGTTACAGTACCATCTGGCATCATGCAA...CCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATGGAGACATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
3UTR CAA 72 bp TGTCTCCATCAGTTTTTCTGCCCTCTTCCCCAAGACTaGAAGCTGTTAGGATGCTTATCAGCCATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: CLHQFFCPLPQD*KLLGCLSAIAS
Trigger: AGAGGCTATGGCTGATAAGCATCCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATGGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR GCA 90 bp TGGCAATGTCTCCATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGCTGTTATTAAGTGGCTCTTTTTaGATGATGCCAGATGGTACT +
Preference number: 4 (lower is better)
Translates to: WQCLHQFFCPLPQDLKLLLSGSF*MMPDGT
Trigger: AGTACCATCTGGCATCATGCAAAAAGAGCCACTTAA...TAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATGGAGACATTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR TCA 90 bp TTTAATTGGCAATGTCTCCATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGAGTCTCAAGAACAAATaGAGGAAAATGATGCGCATG +
Preference number: 4 (lower is better)
Translates to: FNWQCLHQFFCPLPQDLKSLKNK*RKMMRM
Trigger: CATGCGCATCATTTTCCTTCATTTGTTCTTGAGACT...CTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATGGAGACATTGCCAATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR CCA 90 bp TTTAATTGGCAATGTCTCCATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGCTTTTGAAGGTTAAGTaGCTCTTTTTGCATGATGCC +
Preference number: 4 (lower is better)
Translates to: FNWQCLHQFFCPLPQDLKLLKVK*LFLHDA
Trigger: GGCATCATGCAAAAAGAGCCACTTAACCTTCAAAAG...CTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATGGAGACATTGCCAATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR CCA 90 bp AAAAATGACTTCTATTTGTCTGTGGGCATTTTAATTGGCAATGTCTCCATCAGTATTGACTCCCAGCACTaGAGAAGTTTTCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: KNDFYLSVGILIGNVSISIDSQH*RSFHFL
Trigger: AAGAAAATGAAAACTTCTCCAGTGCTGGGAGTCAAT...ACTGATGGAGACATTGCCAATTAAAATGCCCACAGACAAATAGAAGTCATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR CAA 90 bp CATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGCTGTTAGGATGCTTATCAATCAGGGTCAGGAAATaGACTCCCAGCACTGGAGAA +
Preference number: 5 (lower is better)
Translates to: HQFFCPLPQDLKLLGCLSIRVRK*TPSTGE
Trigger: TTCTCCAGTGCTGGGAGTCAATTTCCTGACCCTGAT...TGATAAGCATCCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS GCA 90 bp AACTGGGTGAGTAATCTTTTGAAGGTTAAGTGGCTCATCATCCACTaGAGTCCTGTTGATACAGTTGGCCTCATGTTCCTTGAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: NWVSNLLKVKWLIIH*SPVDTVGLMFLEPF
Trigger: AAAAGGCTCAAGGAACATGAGGCCAACTGTATCAACAGGACTGCAGTGGATGATGAGCCACTTAACCTTCAAAAGATTACTCACCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065978.9
CDS-3UTR CAA 90 bp ATGTCTCCATCAGTTTTTCTGCCCTCTTCCCCAAGACTTGAAGCTGTTAGGATGTGGGTGAGTAATCTTTaGAAGGTTAAGTGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: MSPSVFLPSSPRLEAVRMWVSNL*KVKWLF
Trigger: AAAGAGCCACTTAACCTTCAAAAGATTACTCACCCA...CATCCTAACAGCTTCAAGTCTTGGGGAAGAGGGCAGAAAAACTGATGGAGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS-3UTR CAA 90 bp AAAAATGACTTCTATTTGTCTGTGGGCATTTTAATTGGCAATGTCTCCATCAGTCAGGTATCCTGTGGTTaGGATCATAAGGACATAGCT +
Preference number: 5 (lower is better)
Translates to: KNDFYLSVGILIGNVSISQVSCG*DHKDIA
Trigger: AGCTATGTCCTTATGATCCAAACCACAGGATACCTG...ACTGATGGAGACATTGCCAATTAAAATGCCCACAGACAAATAGAAGTCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229158.2
CDS CCA 72 bp TTCAAAAACTGGGTGAGTAATCTTTTGAAGGTTAAGTaGCTCATCATCCACTGCAGTCCTGTTGATACAGTT +
Preference number: 6 (lower is better)
Translates to: FKNWVSNLLKVK*LIIHCSPVDTV
Trigger: AACTGTATCAACAGGACTGCAGTGGATGATGAGCCACTTAACCTTCAAAAGATTACTCACCCAGTTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065978.9