Pregenerated sensors for GTSF1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070708Ensembl transcript IDs: ENSMUST00000094653.6
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR TCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGCGGCTGTGGGAGGCTaGCTTGCAGAGGGCCTAATG | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLAAVGG*LAEGLM Trigger: CATTAGGCCCTCTGCAAGTCAGCCTCCCACAGCCGC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR TCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGGTACTGGAACCTGCTaGGCGGGATTCGGTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLGTGTC*AGFGGE Trigger: CTCACCACCGAATCCCGCTCAGCAGGTTCCAGTACC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR TCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGTTCAGCCAGCTTTCTaGTGGGAACCACGTGGCAGG | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLVQPAF*WEPRGR Trigger: CCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGAAC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR GCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGAGTGTGTCCTGGTTCTaGGGCTGTGGGAGGCTGACT | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLSVSWF*GCGRLT Trigger: AGTCAGCCTCCCACAGCCGCAGAACCAGGACACACT...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR CCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGACGCCAGGTGGTACTaGAACCTGCTGAGCGGGATT | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLDARWY*NLLSGI Trigger: AATCCCGCTCAGCAGGTTCCAGTACCACCTGGCGTC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR CCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGAGTCTGAGGATCTTCTaGGCATTGGTCTCCTCCCCG | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLSLRIF*ALVSSP Trigger: CGGGGAGGAGACCAATGCCCAGAAGATCCTCAGACT...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR TCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGTTCTTCTTCCTGCATaGCGCCAGGTGGTACTGGAA | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLVLLPA*RQVVLE Trigger: TTCCAGTACCACCTGGCGTCATGCAGGAAGAAGAAC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR GCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGTGGGGTTCTTCTTCCTaGATGACGCCAGGTGGTACT | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLWGSSS*MTPGGT Trigger: AGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCA...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR CCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGCTGATGGGAACCACGTaGCAGGCGTTGTATTTACAG | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLLMGTT*QALYLQ Trigger: CTGTAAATACAACGCCTGCCACGTGGTTCCCATCAG...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR CCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGCCTCCCCGTGACTCTTaGATGTCACTTTCACAAACA | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLPPRDS*MSLSQT Trigger: TGTTTGTGAAAGTGACATCCAAGAGTCACGGGGAGG...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR CCA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGCGTTGTATTTACAGCTaGCCATCTTTTTGGCTTTCT | + |
Preference number: 4 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLRCIYS*PSFWLS Trigger: AGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACG...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS TCA 90 bp | GCCAACGAACCTGTAGTGTGTCCTGGTTCTGCGGCTGTGGGAGGCTaGCTTGCAGAGGGCCTAATGTGTCCTCTTCCTCCACGGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: ANEPVVCPGSAAVGG*LAEGLMCPLPPRSS Trigger: GGAGCTCCGTGGAGGAAGAGGACACATTAGGCCCTCTGCAAGTCAGCCTCCCACAGCCGCAGAACCAGGACACACTACAGGTTCGTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS TCA 90 bp | ACAGCTGGCCATCTTTTTGGCTTTCTTGGGGTTCTTCTTCCTGCATaGCGCCAGGTGGTACTGGAACCTGCTGAGCGGGATTCGGTGGTG | + |
Preference number: 5 (lower is better) Translates to: TAGHLFGFLGVLLPA*RQVVLEPAERDSVV Trigger: CACCACCGAATCCCGCTCAGCAGGTTCCAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS CCA 90 bp | CGTGGCAGGCGTTGTATTTACAGCTGGCCATCTTTTTGGCTTTCTTaGGGTTCTTCTTCCTGCATGACGCCAGGTGGTACTGGAACCTGC | + |
Preference number: 5 (lower is better) Translates to: RGRRCIYSWPSFWLS*GSSSCMTPGGTGTC Trigger: GCAGGTTCCAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS CCA 90 bp | TGGGAACCACGTGGCAGGCGTTGTATTTACAGCTGGCCATCTTTTTaGCTTTCTTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGTACT | + |
Preference number: 5 (lower is better) Translates to: WEPRGRRCIYSWPSF*LSWGSSSCMTPGGT Trigger: AGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS CCA 90 bp | ACACAGGTAGCTTCATGTTCAGCCAGCTTTCTGATGGGAACCACGTaGCAGGCGTTGTATTTACAGCTGGCCATCTTTTTGGCTTTCTTG | + |
Preference number: 5 (lower is better) Translates to: TQVASCSASFLMGTT*QALYLQLAIFLAFL Trigger: CAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGAACATGAAGCTACCTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR CAA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGACCACGTGGCAGGCGTaGTATTTACAGCTGGCCATC | + |
Preference number: 5 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLTTWQA*YLQLAI Trigger: GATGGCCAGCTGTAAATACAACGCCTGCCACGTGGT...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS-3UTR CAA 90 bp | CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGCAGCTGGCCATCTTTTaGGCTTTCTTGGGGTTCTTC | + |
Preference number: 5 (lower is better) Translates to: RYFAGFYSDEMRDPSTHLQLAIF*AFLGFF Trigger: GAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTG...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS TCA 72 bp | CCTGTAGTGTGTCCTGGTTCTGCGGCTGTGGGAGGCTaGCTTGCAGAGGGCCTAATGTGTCCTCTTCCTCCA | + |
Preference number: 6 (lower is better) Translates to: PVVCPGSAAVGG*LAEGLMCPLPP Trigger: TGGAGGAAGAGGACACATTAGGCCCTCTGCAAGTCAGCCTCCCACAGCCGCAGAACCAGGACACACTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS TCA 72 bp | CATCTTTTTGGCTTTCTTGGGGTTCTTCTTCCTGCATaGCGCCAGGTGGTACTGGAACCTGCTGAGCGGGAT | + |
Preference number: 6 (lower is better) Translates to: HLFGFLGVLLPA*RQVVLEPAERD Trigger: ATCCCGCTCAGCAGGTTCCAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS CAA 90 bp | ATGGGAACCACGTGGCAGGCGTTGTATTTACAGCTGGCCATCTTTTaGGCTTTCTTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGTAC | + |
Preference number: 6 (lower is better) Translates to: MGTTWQALYLQLAIF*AFLGFFFLHDARWY Trigger: GTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS CAA 72 bp | ACGTGGCAGGCGTTGTATTTACAGCTGGCCATCTTTTaGGCTTTCTTGGGGTTCTTCTTCCTGCATGACGCC | + |
Preference number: 6 (lower is better) Translates to: TWQALYLQLAIF*AFLGFFFLHDA Trigger: GGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS CAA 90 bp | GCTTCATGTTCAGCCAGCTTTCTGATGGGAACCACGTGGCAGGCGTaGTATTTACAGCTGGCCATCTTTTTGGCTTTCTTGGGGTTCTTC | + |
Preference number: 6 (lower is better) Translates to: ASCSASFLMGTTWQA*YLQLAIFLAFLGFF Trigger: GAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGAACATGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS CCA 72 bp | GCTTCATGTTCAGCCAGCTTTCTGATGGGAACCACGTaGCAGGCGTTGTATTTACAGCTGGCCATCTTTTTG | + |
Preference number: 6 (lower is better) Translates to: ASCSASFLMGTT*QALYLQLAIFL Trigger: CAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGAACATGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |
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CDS CAA 72 bp | TCAGCCAGCTTTCTGATGGGAACCACGTGGCAGGCGTaGTATTTACAGCTGGCCATCTTTTTGGCTTTCTTG | + |
Preference number: 6 (lower is better) Translates to: SASFLMGTTWQA*YLQLAIFLAFL Trigger: CAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094653.6 |