RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTSF1L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070708

Ensembl transcript IDs: ENSMUST00000094653.6

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGCGGCTGTGGGAGGCTaGCTTGCAGAGGGCCTAATG +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLAAVGG*LAEGLM
Trigger: CATTAGGCCCTCTGCAAGTCAGCCTCCCACAGCCGC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR TCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGGTACTGGAACCTGCTaGGCGGGATTCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLGTGTC*AGFGGE
Trigger: CTCACCACCGAATCCCGCTCAGCAGGTTCCAGTACC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR TCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGTTCAGCCAGCTTTCTaGTGGGAACCACGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLVQPAF*WEPRGR
Trigger: CCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGAAC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR GCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGAGTGTGTCCTGGTTCTaGGGCTGTGGGAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLSVSWF*GCGRLT
Trigger: AGTCAGCCTCCCACAGCCGCAGAACCAGGACACACT...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR CCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGACGCCAGGTGGTACTaGAACCTGCTGAGCGGGATT +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLDARWY*NLLSGI
Trigger: AATCCCGCTCAGCAGGTTCCAGTACCACCTGGCGTC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR CCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGAGTCTGAGGATCTTCTaGGCATTGGTCTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLSLRIF*ALVSSP
Trigger: CGGGGAGGAGACCAATGCCCAGAAGATCCTCAGACT...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR TCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGGTTCTTCTTCCTGCATaGCGCCAGGTGGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLVLLPA*RQVVLE
Trigger: TTCCAGTACCACCTGGCGTCATGCAGGAAGAAGAAC...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR GCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGTGGGGTTCTTCTTCCTaGATGACGCCAGGTGGTACT +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLWGSSS*MTPGGT
Trigger: AGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCA...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR CCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGCTGATGGGAACCACGTaGCAGGCGTTGTATTTACAG +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLLMGTT*QALYLQ
Trigger: CTGTAAATACAACGCCTGCCACGTGGTTCCCATCAG...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR CCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGCCTCCCCGTGACTCTTaGATGTCACTTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLPPRDS*MSLSQT
Trigger: TGTTTGTGAAAGTGACATCCAAGAGTCACGGGGAGG...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR CCA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGCGTTGTATTTACAGCTaGCCATCTTTTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLRCIYS*PSFWLS
Trigger: AGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACG...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS TCA 90 bp GCCAACGAACCTGTAGTGTGTCCTGGTTCTGCGGCTGTGGGAGGCTaGCTTGCAGAGGGCCTAATGTGTCCTCTTCCTCCACGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: ANEPVVCPGSAAVGG*LAEGLMCPLPPRSS
Trigger: GGAGCTCCGTGGAGGAAGAGGACACATTAGGCCCTCTGCAAGTCAGCCTCCCACAGCCGCAGAACCAGGACACACTACAGGTTCGTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS TCA 90 bp ACAGCTGGCCATCTTTTTGGCTTTCTTGGGGTTCTTCTTCCTGCATaGCGCCAGGTGGTACTGGAACCTGCTGAGCGGGATTCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TAGHLFGFLGVLLPA*RQVVLEPAERDSVV
Trigger: CACCACCGAATCCCGCTCAGCAGGTTCCAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS CCA 90 bp CGTGGCAGGCGTTGTATTTACAGCTGGCCATCTTTTTGGCTTTCTTaGGGTTCTTCTTCCTGCATGACGCCAGGTGGTACTGGAACCTGC +
Preference number: 5 (lower is better)
Translates to: RGRRCIYSWPSFWLS*GSSSCMTPGGTGTC
Trigger: GCAGGTTCCAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS CCA 90 bp TGGGAACCACGTGGCAGGCGTTGTATTTACAGCTGGCCATCTTTTTaGCTTTCTTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGTACT +
Preference number: 5 (lower is better)
Translates to: WEPRGRRCIYSWPSF*LSWGSSSCMTPGGT
Trigger: AGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS CCA 90 bp ACACAGGTAGCTTCATGTTCAGCCAGCTTTCTGATGGGAACCACGTaGCAGGCGTTGTATTTACAGCTGGCCATCTTTTTGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: TQVASCSASFLMGTT*QALYLQLAIFLAFL
Trigger: CAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGAACATGAAGCTACCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR CAA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGACCACGTGGCAGGCGTaGTATTTACAGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLTTWQA*YLQLAI
Trigger: GATGGCCAGCTGTAAATACAACGCCTGCCACGTGGT...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS-3UTR CAA 90 bp CGTTACTTTGCAGGTTTTTATTCAGATGAGATGCGCGATCCATCCACGCATTTGCAGCTGGCCATCTTTTaGGCTTTCTTGGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RYFAGFYSDEMRDPSTHLQLAIF*AFLGFF
Trigger: GAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTG...CAAATGCGTGGATGGATCGCGCATCTCATCTGAATAAAAACCTGCAAAGTAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS TCA 72 bp CCTGTAGTGTGTCCTGGTTCTGCGGCTGTGGGAGGCTaGCTTGCAGAGGGCCTAATGTGTCCTCTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PVVCPGSAAVGG*LAEGLMCPLPP
Trigger: TGGAGGAAGAGGACACATTAGGCCCTCTGCAAGTCAGCCTCCCACAGCCGCAGAACCAGGACACACTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS TCA 72 bp CATCTTTTTGGCTTTCTTGGGGTTCTTCTTCCTGCATaGCGCCAGGTGGTACTGGAACCTGCTGAGCGGGAT +
Preference number: 6 (lower is better)
Translates to: HLFGFLGVLLPA*RQVVLEPAERD
Trigger: ATCCCGCTCAGCAGGTTCCAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS CAA 90 bp ATGGGAACCACGTGGCAGGCGTTGTATTTACAGCTGGCCATCTTTTaGGCTTTCTTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGTAC +
Preference number: 6 (lower is better)
Translates to: MGTTWQALYLQLAIF*AFLGFFFLHDARWY
Trigger: GTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS CAA 72 bp ACGTGGCAGGCGTTGTATTTACAGCTGGCCATCTTTTaGGCTTTCTTGGGGTTCTTCTTCCTGCATGACGCC +
Preference number: 6 (lower is better)
Translates to: TWQALYLQLAIF*AFLGFFFLHDA
Trigger: GGCGTCATGCAGGAAGAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS CAA 90 bp GCTTCATGTTCAGCCAGCTTTCTGATGGGAACCACGTGGCAGGCGTaGTATTTACAGCTGGCCATCTTTTTGGCTTTCTTGGGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: ASCSASFLMGTTWQA*YLQLAIFLAFLGFF
Trigger: GAAGAACCCCAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGAACATGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS CCA 72 bp GCTTCATGTTCAGCCAGCTTTCTGATGGGAACCACGTaGCAGGCGTTGTATTTACAGCTGGCCATCTTTTTG +
Preference number: 6 (lower is better)
Translates to: ASCSASFLMGTT*QALYLQLAIFL
Trigger: CAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGAACATGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6
CDS CAA 72 bp TCAGCCAGCTTTCTGATGGGAACCACGTGGCAGGCGTaGTATTTACAGCTGGCCATCTTTTTGGCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: SASFLMGTTWQA*YLQLAIFLAFL
Trigger: CAAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACGCCTGCCACGTGGTTCCCATCAGAAAGCTGGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094653.6