Pregenerated sensors for GTPBP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022668Ensembl transcript IDs: ENSMUST00000023348.11, ENSMUST00000161436.2, ENSMUST00000162479.2, ENSMUST00000162512.8
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGAAAGCCCCTCAAGAGCAAGCCGCAGTGCCTGTCTGTGTGGTaGCCCAGCATGGTGGGCAAGCAGTCCTTCCACTTCAGCGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: LRKPLKSKPQCLSVW*PSMVGKQSFHFSAP Trigger: AGGAGCGCTGAAGTGGAAGGACTGCTTGCCCACCATGCTGGGCCACCACACAGACAGGCACTGCGGCTTGCTCTTGAGGGGCTTTCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CCA 90 bp | ATGCTCAGAAAGCCCCTCAAGAGCAAGCCGCAGTGCCTGTCTGTGTaGTGGCCCAGCATGGTGGGCAAGCAGTCCTTCCACTTCAGCGCT | + |
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Preference number: 1 (lower is better) Translates to: MLRKPLKSKPQCLSV*WPSMVGKQSFHFSA Trigger: AGCGCTGAAGTGGAAGGACTGCTTGCCCACCATGCTGGGCCACCACACAGACAGGCACTGCGGCTTGCTCTTGAGGGGCTTTCTGAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR TCA 90 bp | CATCCTCTGGTCCCTGGGCAGGCATTGCACTGGAAGCCCATGCCTTaGGAATGCTCAGAAAGCCCCTCAAGAGCAAGCCGCAGTGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: HPLVPGQALHWKPMP*ECSESPSRASRSAC Trigger: ACAGGCACTGCGGCTTGCTCTTGAGGGGCTTTCTGAGCATTCTCAAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGACCAGAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 90 bp | CATGCCTTGAGAATGCTCAGAAAGCCCCTCAAGAGCAAGCCGCAGTaGCTGTCTGTGTGGTGGCCCAGCATGGTGGGCAAGCAGTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: HALRMLRKPLKSKPQ*LSVWWPSMVGKQSF Trigger: GAAGGACTGCTTGCCCACCATGCTGGGCCACCACACAGACAGGCACTGCGGCTTGCTCTTGAGGGGCTTTCTGAGCATTCTCAAGGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 90 bp | TGCCTCATCCTCTGGTCCCTGGGCAGGCATTGCACTGGAAGCCCATaGCTTGAGAATGCTCAGAAAGCCCCTCAAGAGCAAGCCGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: CLILWSLGRHCTGSP*LENAQKAPQEQAAV Trigger: CACTGCGGCTTGCTCTTGAGGGGCTTTCTGAGCATTCTCAAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGACCAGAGGATGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 90 bp | GAAGAGGTGTGTCCCTGCCTCATCCTCTGGTCCCTGGGCAGGCATTaGACTGGAAGCCCATGCCTTGAGAATGCTCAGAAAGCCCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: EEVCPCLILWSLGRH*TGSPCLENAQKAPQ Trigger: TTGAGGGGCTTTCTGAGCATTCTCAAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGACCAGAGGATGAGGCAGGGACACACCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 90 bp | ATCTCTGGGTGCTTGGGTATGTACAACTGGGAAGAGGTGTGTCCCTaGCTCATCCTCTGGTCCCTGGGCAGGCATTGCACTGGAAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ISGCLGMYNWEEVCP*LILWSLGRHCTGSP Trigger: TGGGCTTCCAGTGCAATGCCTGCCCAGGGACCAGAGGATGAGGCAGGGACACACCTCTTCCCAGTTGTACATACCCAAGCACCCAGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CCA 90 bp | TGTACAACTGGGAAGAGGTGTGTCCCTGCCTCATCCTCTGGTCCCTaGGCAGGCATTGCACTGGAAGCCCATGCCTTGAGAATGCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: CTTGKRCVPASSSGP*AGIALEAHALRMLR Trigger: TCTGAGCATTCTCAAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGACCAGAGGATGAGGCAGGGACACACCTCTTCCCAGTTGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 90 bp | CCTTCCACTTCAGCGCTCCTTTTCCTGGTCACCTCAGCTGTCTGCTaGTGTGGGAAGCATCGACAGACAGTTCTGCTTTTGGCAGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: PSTSALLFLVTSAVC*CGKHRQTVLLLAEG Trigger: TCCTTCTGCCAAAAGCAGAACTGTCTGTCGATGCTTCCCACAGCAGCAGACAGCTGAGGTGACCAGGAAAAGGAGCGCTGAAGTGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 90 bp | AGTCCTTCCACTTCAGCGCTCCTTTTCCTGGTCACCTCAGCTGTCTaGTGCTGTGGGAAGCATCGACAGACAGTTCTGCTTTTGGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: SPSTSALLFLVTSAV*CCGKHRQTVLLLAE Trigger: TTCTGCCAAAAGCAGAACTGTCTGTCGATGCTTCCCACAGCAGCAGACAGCTGAGGTGACCAGGAAAAGGAGCGCTGAAGTGGAAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 90 bp | CGACTTTCAAGGTGGAGGGCCTTCTATGATAAAGCCTGTGACTTCTaGTGTGCTGTGTGGTTGCTTTGGGTTTGTAAACATGCAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: RLSRWRAFYDKACDF*CAVWLLWVCKHAAV Trigger: GACAGCTGCATGTTTACAAACCCAAAGCAACCACACAGCACAGCAGAAGTCACAGGCTTTATCATAGAAGGCCCTCCACCTTGAAAGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR TCA 90 bp | GAGGCAACATCAAGTAGTTTTCCCAAGGACACTAGAAGCAGAACCTaGAGATCAAGTCTCAGGACTGGTGCTTCCTTGGTCTGGCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: EATSSSFPKDTRSRT*RSSLRTGASLVWQV Trigger: AACTTGCCAGACCAAGGAAGCACCAGTCCTGAGACTTGATCTTCAGGTTCTGCTTCTAGTGTCCTTGGGAAAACTACTTGATGTTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CCA 90 bp | CCACCTAAATCTAACTCCTGTTTACTTTTGCTGCGACTTTCAAGGTaGAGGGCCTTCTATGATAAAGCCTGTGACTTCTGCTGTGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PPKSNSCLLLLRLSR*RAFYDKACDFCCAV Trigger: CACAGCACAGCAGAAGTCACAGGCTTTATCATAGAAGGCCCTCCACCTTGAAAGTCGCAGCAAAAGTAAACAGGAGTTAGATTTAGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 90 bp | GACTGGGAACTTCTCCACCTAAATCTAACTCCTGTTTACTTTTGCTaGGACTTTCAAGGTGGAGGGCCTTCTATGATAAAGCCTGTGACT | + |
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Preference number: 1 (lower is better) Translates to: DWELLHLNLTPVYFC*DFQGGGPSMIKPVT Trigger: AGTCACAGGCTTTATCATAGAAGGCCCTCCACCTTGAAAGTCGCAGCAAAAGTAAACAGGAGTTAGATTTAGGTGGAGAAGTTCCCAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 90 bp | TCACCTCAGCTGTCTGCTGCTGTGGGAAGCATCGACAGACAGTTCTaGTTTTGGCAGAAGGATGGCTTTCAAAGTAATTATTTTGACATC | + |
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Preference number: 1 (lower is better) Translates to: SPQLSAAVGSIDRQF*FWQKDGFQSNYFDI Trigger: GATGTCAAAATAATTACTTTGAAAGCCATCCTTCTGCCAAAAGCAGAACTGTCTGTCGATGCTTCCCACAGCAGCAGACAGCTGAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CCA 90 bp | TGGAGGGCCTTCTATGATAAAGCCTGTGACTTCTGCTGTGCTGTGTaGTTGCTTTGGGTTTGTAAACATGCAGCTGTCTTCGGTATTATA | + |
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Preference number: 1 (lower is better) Translates to: WRAFYDKACDFCCAV*LLWVCKHAAVFGII Trigger: TATAATACCGAAGACAGCTGCATGTTTACAAACCCAAAGCAACCACACAGCACAGCAGAAGTCACAGGCTTTATCATAGAAGGCCCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR TCA 90 bp | TTAAAAAGCCACAGAGTTGTGGAGCCTTACCACAGCTATAACCTCTaGCAGCAGTGTCACTTTGGAATGCTAAGATATCTCATGAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: LKSHRVVEPYHSYNL*QQCHFGMLRYLMKS Trigger: ACTCTTCATGAGATATCTTAGCATTCCAAAGTGACACTGCTGTCAGAGGTTATAGCTGTGGTAAGGCTCCACAACTCTGTGGCTTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR TCA 90 bp | GTGTTTACCCATGGGCTGAGCCATCTCCTGCCCAGGTCTTCCTTTTaGATAACAAATGTGAGTGTATGCTATGTTATTAAAGATGGATTA | + |
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Preference number: 1 (lower is better) Translates to: VFTHGLSHLLPRSSF*ITNVSVCYVIKDGL Trigger: TAATCCATCTTTAATAACATAGCATACACTCACATTTGTTATTCAAAAGGAAGACCTGGGCAGGAGATGGCTCAGCCCATGGGTAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CAA 90 bp | TCATCCTCTGGTCCCTGGGCAGGCATTGCACTGGAAGCCCATGCCTaGAGAATGCTCAGAAAGCCCCTCAAGAGCAAGCCGCAGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSSGPWAGIALEAHA*RMLRKPLKSKPQCL Trigger: CAGGCACTGCGGCTTGCTCTTGAGGGGCTTTCTGAGCATTCTCAAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGACCAGAGGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTACAACTGGGAAGAGGTGTGTCCCTGCCTCATCCTCTGGTCCCTGGGCAGGGTCACCTCAGCTGTCTaGTGCTGTGGGAAGCATCGA | + |
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Preference number: 2 (lower is better) Translates to: MYNWEEVCPCLILWSLGRVTSAV*CCGKHR Trigger: TCGATGCTTCCCACAGCAGCAGACAGCTGAGGTGAC...CCTGCCCAGGGACCAGAGGATGAGGCAGGGACACACCTCTTCCCAGTTGTACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCACCTATGGTGCCAATTCCTGGGCTAAGCATATTCAAGTCACCACAGGTGGGTGGCCCAGCATGGTaGGCAAGCAGTCCTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: QAPMVPIPGLSIFKSPQVGGPAW*ASSPST Trigger: AGTGGAAGGACTGCTTGCCCACCATGCTGGGCCACC...CACCTGTGGTGACTTGAATATGCTTAGCCCAGGAATTGGCACCATAGGTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCACCTATGGTGCCAATTCCTGGGCTAAGCATATTCAAGTCACCACAGGTGTCCCTGGGCAGGCATTaGACTGGAAGCCCATGCCTT | + |
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Preference number: 2 (lower is better) Translates to: QAPMVPIPGLSIFKSPQVSLGRH*TGSPCL Trigger: AAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGA...CACCTGTGGTGACTTGAATATGCTTAGCCCAGGAATTGGCACCATAGGTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTACAACTGGGAAGAGGTGTGTCCCTGCCTCATCCTCTGGTCCCTGGGCAGGACTAGAAGCAGAACCTaGAGATCAAGTCTCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: MYNWEEVCPCLILWSLGRTRSRT*RSSLRT Trigger: AGTCCTGAGACTTGATCTTCAGGTTCTGCTTCTAGT...CCTGCCCAGGGACCAGAGGATGAGGCAGGGACACACCTCTTCCCAGTTGTACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGCGCTCCTTTTCCTGGTCACCTCAGCTGTCTGCTGCTGTGGGAAGCATCCACAGCTATAACCTCTaGCAGCAGTGTCACTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LQRSFSWSPQLSAAVGSIHSYNL*QQCHFG Trigger: TCCAAAGTGACACTGCTGTCAGAGGTTATAGCTGTG...GATGCTTCCCACAGCAGCAGACAGCTGAGGTGACCAGGAAAAGGAGCGCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCCTGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGGCAGTGCCTGTCTGTGTaGTGGCCCAGCATGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: NSWAKHIQVTTGGLQIVRQCLSV*WPSMVG Trigger: GCCCACCATGCTGGGCCACCACACAGACAGGCACTG...CCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCAGGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR GCA 90 bp | TTGAGAATGCTCAGAAAGCCCCTCAAGAGCAAGCCGCAGTGCCTGTCTGTGTGGCCTGTTTACTTTTGCTaGGACTTTCAAGGTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LRMLRKPLKSKPQCLSVWPVYFC*DFQGGG Trigger: CCCTCCACCTTGAAAGTCGCAGCAAAAGTAAACAGG...CCACACAGACAGGCACTGCGGCTTGCTCTTGAGGGGCTTTCTGAGCATTCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCCGAGGGTGGGAGTGGCAGGATATGAATCTGGATTTTGCACACTCACTTATCAAGTCTCAGGACTaGTGCTTCCTTGGTCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: KARGWEWQDMNLDFAHSLIKSQD*CFLGLA Trigger: TGCCAGACCAAGGAAGCACCAGTCCTGAGACTTGAT...AAGTGAGTGTGCAAAATCCAGATTCATATCCTGCCACTCCCACCCTCGGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAAGCCCCTCAAGAGCAAGCCGCAGTGCCTGTCTGTGTGGTGGCCCAGCAACAGCAGTGTCACTTTaGAATGCTAAGATATCTCAT | + |
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Preference number: 2 (lower is better) Translates to: SESPSRASRSACLCGGPATAVSL*NAKISH Trigger: ATGAGATATCTTAGCATTCCAAAGTGACACTGCTGT...TGCTGGGCCACCACACAGACAGGCACTGCGGCTTGCTCTTGAGGGGCTTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCCGAGGGTGGGAGTGGCAGGATATGAATCTGGATTTTGCACACTCACTTCAGCGCATTTGTTCTTaGTTCAGGGTAATGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: KARGWEWQDMNLDFAHSLQRICS*FRVMQV Trigger: GACCTGCATTACCCTGAAGCAAGAACAAATGCGCTG...AAGTGAGTGTGCAAAATCCAGATTCATATCCTGCCACTCCCACCCTCGGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTCCAGGCACCTATGGTGCCAATTCCTGGGCTAAGCATATTCAAGTCACCGAATCTCTGGGTGCTTaGGTATGTACAACTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: WLPGTYGANSWAKHIQVTESLGA*VCTTGK Trigger: CTTCCCAGTTGTACATACCCAAGCACCCAGAGATTC...GGTGACTTGAATATGCTTAGCCCAGGAATTGGCACCATAGGTGCCTGGAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCACCTATGGTGCCAATTCCTGGGCTAAGCATATTCAAGTCACCACAGGTGCCCAGGTCTTCCTTTTaGATAACAAATGTGAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: QAPMVPIPGLSIFKSPQVPRSSF*ITNVSV Trigger: TACACTCACATTTGTTATTCAAAAGGAAGACCTGGG...CACCTGTGGTGACTTGAATATGCTTAGCCCAGGAATTGGCACCATAGGTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCCGAGGGTGGGAGTGGCAGGATATGAATCTGGATTTTGCACACTCACTTGGTGCTTCCTTGGTCTaGCAAGTTTTGACAATTTTT | + |
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Preference number: 2 (lower is better) Translates to: KARGWEWQDMNLDFAHSLGASLV*QVLTIF Trigger: AAAAATTGTCAAAACTTGCCAGACCAAGGAAGCACC...AAGTGAGTGTGCAAAATCCAGATTCATATCCTGCCACTCCCACCCTCGGGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CAA 90 bp | AACAGCCCCAAATTCTGTAATCTGAACCATTTCCAGTTCCTAGCTTaGCAGATAAGAGCTGAAAGGAGCATTAGGTGTTCCAGTTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: NSPKFCNLNHFQFLA*QIRAERSIRCSSCK Trigger: CTTACAACTGGAACACCTAATGCTCCTTTCAGCTCTTATCTGCAAAGCTAGGAACTGGAAATGGTTCAGATTACAGAATTTGGGGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CAA 90 bp | TATAGAAGCAGGGTCTCACTTCATGCACTTGTATATGCTCTGGACTaGTCAGTTAAAATAGAAAAGCCAGCTAGCATCTGTCCTAATGAC | + |
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Preference number: 2 (lower is better) Translates to: YRSRVSLHALVYALD*SVKIEKPASICPND Trigger: GTCATTAGGACAGATGCTAGCTGGCTTTTCTATTTTAACTGACAAGTCCAGAGCATATACAAGTGCATGAAGTGAGACCCTGCTTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CCA 72 bp | GCAAGCCGCAGTGCCTGTCTGTGTGGTGGCCCAGCATaGTGGGCAAGCAGTCCTTCCACTTCAGCGCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: ASRSACLCGGPA*WASSPSTSALL Trigger: AAGGAGCGCTGAAGTGGAAGGACTGCTTGCCCACCATGCTGGGCCACCACACAGACAGGCACTGCGGCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CCA 72 bp | AGCCGCAGTGCCTGTCTGTGTGGTGGCCCAGCATGGTaGGCAAGCAGTCCTTCCACTTCAGCGCTCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: SRSACLCGGPAW*ASSPSTSALLF Trigger: GAAAAGGAGCGCTGAAGTGGAAGGACTGCTTGCCCACCATGCTGGGCCACCACACAGACAGGCACTGCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR TCA 72 bp | GTCCCTGGGCAGGCATTGCACTGGAAGCCCATGCCTTaGGAATGCTCAGAAAGCCCCTCAAGAGCAAGCCGC | + |
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Preference number: 3 (lower is better) Translates to: VPGQALHWKPMP*ECSESPSRASR Trigger: GCGGCTTGCTCTTGAGGGGCTTTCTGAGCATTCTCAAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR TCA 72 bp | AGAAAACAGCGAGTCTTCCTTCCCCCTGCCCTCCAGTaGCGGCACAGCCTACGGCCTGCAAGCCTGAAACCT | + |
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Preference number: 3 (lower is better) Translates to: RKQRVFLPPALQ*RHSLRPASLKP Trigger: AGGTTTCAGGCTTGCAGGCCGTAGGCTGTGCCGTCACTGGAGGGCAGGGGGAAGGAAGACTCGCTGTTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 72 bp | AGAATGCTCAGAAAGCCCCTCAAGAGCAAGCCGCAGTaGCTGTCTGTGTGGTGGCCCAGCATGGTGGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: RMLRKPLKSKPQ*LSVWWPSMVGK Trigger: CTTGCCCACCATGCTGGGCCACCACACAGACAGGCACTGCGGCTTGCTCTTGAGGGGCTTTCTGAGCATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CCA 72 bp | GGGCAAGCAGTCCTTCCACTTCAGCGCTCCTTTTCCTaGTCACCTCAGCTGTCTGCTGCTGTGGGAAGCATC | + |
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Preference number: 3 (lower is better) Translates to: GQAVLPLQRSFS*SPQLSAAVGSI Trigger: GATGCTTCCCACAGCAGCAGACAGCTGAGGTGACCAGGAAAAGGAGCGCTGAAGTGGAAGGACTGCTTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 72 bp | CTCTGGTCCCTGGGCAGGCATTGCACTGGAAGCCCATaGCTTGAGAATGCTCAGAAAGCCCCTCAAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: LWSLGRHCTGSP*LENAQKAPQEQ Trigger: TTGCTCTTGAGGGGCTTTCTGAGCATTCTCAAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGACCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 72 bp | TGTCCCTGCCTCATCCTCTGGTCCCTGGGCAGGCATTaGACTGGAAGCCCATGCCTTGAGAATGCTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: CPCLILWSLGRH*TGSPCLENAQK Trigger: TTTCTGAGCATTCTCAAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGACCAGAGGATGAGGCAGGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR TCA 72 bp | CCCTCCAGTGACGGCACAGCCTACGGCCTGCAAGCCTaGAACCTTAGGCACAACTGCACACTTGCTTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: PSSDGTAYGLQA*NLRHNCTLALK Trigger: CTTTAAAGCAAGTGTGCAGTTGTGCCTAAGGTTTCAGGCTTGCAGGCCGTAGGCTGTGCCGTCACTGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 72 bp | TCAGCGCTCCTTTTCCTGGTCACCTCAGCTGTCTGCTaGTGTGGGAAGCATCGACAGACAGTTCTGCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: SALLFLVTSAVC*CGKHRQTVLLL Trigger: CAAAAGCAGAACTGTCTGTCGATGCTTCCCACAGCAGCAGACAGCTGAGGTGACCAGGAAAAGGAGCGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 72 bp | ACTTCAGCGCTCCTTTTCCTGGTCACCTCAGCTGTCTaGTGCTGTGGGAAGCATCGACAGACAGTTCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: TSALLFLVTSAV*CCGKHRQTVLL Trigger: AAGCAGAACTGTCTGTCGATGCTTCCCACAGCAGCAGACAGCTGAGGTGACCAGGAAAAGGAGCGCTGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CCA 72 bp | GCTCCTTTTCCTGGTCACCTCAGCTGTCTGCTGCTGTaGGAAGCATCGACAGACAGTTCTGCTTTTGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: APFPGHLSCLLL*EASTDSSAFGR Trigger: TCTGCCAAAAGCAGAACTGTCTGTCGATGCTTCCCACAGCAGCAGACAGCTGAGGTGACCAGGAAAAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR GCA 72 bp | TCAACCCCCTGTTGCATAGGGCTGGACCTTGCCTTCTaGTCTGATGACCTGTCCTGGCATTTTAGAATGTGT | + |
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Preference number: 3 (lower is better) Translates to: STPCCIGLDLAF*SDDLSWHFRMC Trigger: ACACATTCTAAAATGCCAGGACAGGTCATCAGAGCAGAAGGCAAGGTCCAGCCCTATGCAACAGGGGGTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
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| 3UTR CCA 72 bp | AGGCACAACTGCACACTTGCTTTAAAGGCCCGAGGGTaGGAGTGGCAGGATATGAATCTGGATTTTGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: RHNCTLALKARG*EWQDMNLDFAH Trigger: GTGTGCAAAATCCAGATTCATATCCTGCCACTCCCACCCTCGGGCCTTTAAAGCAAGTGTGCAGTTGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR GCA 72 bp | CCGAGGGTGGGAGTGGCAGGATATGAATCTGGATTTTaGACACTCACTTCAACTAGGACACTGCTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PRVGVAGYESGF*TLTSTRTLLLS Trigger: AGAAAGCAGCAGTGTCCTAGTTGAAGTGAGTGTGCAAAATCCAGATTCATATCCTGCCACTCCCACCCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR CCA 72 bp | AACTGCACACTTGCTTTAAAGGCCCGAGGGTGGGAGTaGCAGGATATGAATCTGGATTTTGCACACTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: NCTLALKARGWE*QDMNLDFAHSL Trigger: AAGTGAGTGTGCAAAATCCAGATTCATATCCTGCCACTCCCACCCTCGGGCCTTTAAAGCAAGTGTGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR TCA 72 bp | CACAGAGTTGTGGAGCCTTACCACAGCTATAACCTCTaGCAGCAGTGTCACTTTGGAATGCTAAGATATCTC | + |
|
Preference number: 3 (lower is better) Translates to: HRVVEPYHSYNL*QQCHFGMLRYL Trigger: GAGATATCTTAGCATTCCAAAGTGACACTGCTGTCAGAGGTTATAGCTGTGGTAAGGCTCCACAACTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR GCA 72 bp | ATGATAAAGCCTGTGACTTCTGCTGTGCTGTGTGGTTaGTTTGGGTTTGTAAACATGCAGCTGTCTTCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: MIKPVTSAVLCG*FGFVNMQLSSV Trigger: TACCGAAGACAGCTGCATGTTTACAAACCCAAAGCAACCACACAGCACAGCAGAAGTCACAGGCTTTATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR CCA 72 bp | TCTAACTCCTGTTTACTTTTGCTGCGACTTTCAAGGTaGAGGGCCTTCTATGATAAAGCCTGTGACTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SNSCLLLLRLSR*RAFYDKACDFC Trigger: GCAGAAGTCACAGGCTTTATCATAGAAGGCCCTCCACCTTGAAAGTCGCAGCAAAAGTAAACAGGAGTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR CCA 72 bp | ACGTGTCTGTATACATGTATGAGCGTTATGAATCTCTaGGTGCTTGGGTATGTACAACTGGGAAGAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TCLYTCMSVMNL*VLGYVQLGRGV Trigger: CACACCTCTTCCCAGTTGTACATACCCAAGCACCCAGAGATTCATAACGCTCATACATGTATACAGACACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR GCA 72 bp | ATTATTTGTAACCCTTACCCCCAGCGCATTTGTTCTTaGTTCAGGGTAATGCAGGTCTTAATGCCGAATCTC | + |
|
Preference number: 3 (lower is better) Translates to: IICNPYPQRICS*FRVMQVLMPNL Trigger: GAGATTCGGCATTAAGACCTGCATTACCCTGAAGCAAGAACAAATGCGCTGGGGGTAAGGGTTACAAATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR TCA 72 bp | TCACTTTGGAATGCTAAGATATCTCATGAAGAGTTATaGGCTGCCAGTCAAAGCTCGTCTCCCCATTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLWNAKISHEEL*AASQSSSPHSE Trigger: TTCTGAATGGGGAGACGAGCTTTGACTGGCAGCTCATAACTCTTCATGAGATATCTTAGCATTCCAAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR GCA 72 bp | GAACTTCTCCACCTAAATCTAACTCCTGTTTACTTTTaGTGCGACTTTCAAGGTGGAGGGCCTTCTATGATA | + |
|
Preference number: 3 (lower is better) Translates to: ELLHLNLTPVYF*CDFQGGGPSMI Trigger: TATCATAGAAGGCCCTCCACCTTGAAAGTCGCAGCAAAAGTAAACAGGAGTTAGATTTAGGTGGAGAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCACTTCAGCGCTCCTTTTCCTGGTCACCTCAGCTGTCTGCTGCTGTGGGATGCAAACTCGGGGCGTaGTCGAGGCGGACGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLQRSFSWSPQLSAAVGCKLGA*SRRTAE Trigger: CTCCGCCGTCCGCCTCGACCACGCCCCGAGTTTGCA...TCCCACAGCAGCAGACAGCTGAGGTGACCAGGAAAAGGAGCGCTGAAGTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| 3UTR CAA 72 bp | GGTCCCTGGGCAGGCATTGCACTGGAAGCCCATGCCTaGAGAATGCTCAGAAAGCCCCTCAAGAGCAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GPWAGIALEAHA*RMLRKPLKSKP Trigger: CGGCTTGCTCTTGAGGGGCTTTCTGAGCATTCTCAAGGCATGGGCTTCCAGTGCAATGCCTGCCCAGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCACTTCAGCGCTCCTTTTCCTGGTCACCTCAGCTGTCTGCTGCTGTGGGACTTATAGGAAACAGCTaGGGAAAACAGCCTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLQRSFSWSPQLSAAVGLIGNS*GKQPCV Trigger: GACACAAGGCTGTTTTCCTCAGCTGTTTCCTATAAG...TCCCACAGCAGCAGACAGCTGAGGTGACCAGGAAAAGGAGCGCTGAAGTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTCTAGGAACTTAGCAATTATGATCTCTTGCATCTGCCAATACTTAGGTGGCGGACGGCGGAGCTaGGGTACTCGATGCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFSRNLAIMISCICQYLGGGRRS*GTRCGS Trigger: GGAACCGCATCGAGTACCTCAGCTCCGCCGTCCGCC...ACCTAAGTATTGGCAGATGCAAGAGATCATAATTGCTAAGTTCCTAGAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162479.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACAGTTCTGCTTTTGGCAGAAGGATGGCTTTCAAAGTAATTATTTTGACAGGCGGACGGCGGAGCTaGGGTACTCGATGCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDSSAFGRRMAFKVIILTGGRRS*GTRCGS Trigger: GGAACCGCATCGAGTACCTCAGCTCCGCCGTCCGCC...TGTCAAAATAATTACTTTGAAAGCCATCCTTCTGCCAAAAGCAGAACTGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGAATGCTCAGAAAGCCCCTCAAGAGCAAGCCGCAGTGCCTGTCTGTGTGGTCTATAGCCATACCCTaGCATGTCCACCAATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRMLRKPLKSKPQCLSVWSIAIP*HVHQCK Trigger: TTTACATTGGTGGACATGCCAGGGTATGGCTATAGA...CCACACAGACAGGCACTGCGGCTTGCTCTTGAGGGGCTTTCTGAGCATTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTCTAGGAACTTAGCAATTATGATCTCTTGCATCTGCCAATACTTAGGTTGCAAACTCGGGGCGTaGTCGAGGCGGACGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FFSRNLAIMISCICQYLGCKLGA*SRRTAE Trigger: CTCCGCCGTCCGCCTCGACCACGCCCCGAGTTTGCA...ACCTAAGTATTGGCAGATGCAAGAGATCATAATTGCTAAGTTCCTAGAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162479.2 |
||
| CDS-3UTR CCA 90 bp | CATTCTTCTAGGTGTTTAACTCCAGTTGTCAGGAAGAACTCTGACACATCATCTCCAAGGCCCCAGTGCTaGCGCTTTCTCAAGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSRCLTPVVRKNSDTSSPRPQC*RFLKEP Trigger: AGGCTCCTTGAGAAAGCGCCAGCACTGGGGCCTTGG...AGATGATGTGTCAGAGTTCTTCCTGACAACTGGAGTTAAACACCTAGAAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023348.11 ENSMUST00000162512.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTCTAGGAACTTAGCAATTATGATCTCTTGCATCTGCCAATACTTAGGTCCAAGGCCCCAGTGCTaGCGCTTTCTCAAGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFSRNLAIMISCICQYLGPRPQC*RFLKEP Trigger: AGGCTCCTTGAGAAAGCGCCAGCACTGGGGCCTTGG...ACCTAAGTATTGGCAGATGCAAGAGATCATAATTGCTAAGTTCCTAGAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162479.2 |
||
| 3UTR CAA 72 bp | CTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATaGTCAGGCATAGCATCATGTGTTTACCCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSIFKSPQVDFR*SGIASCVYPWA Trigger: AGCCCATGGGTAAACACATGATGCTATGCCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGTTTAACTCCAGTTGTCAGGAAGAACTCTGACACATCATCTACTCTGGGACTTATAGGAAACAGCTaGGGAAAACAGCCTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RCLTPVVRKNSDTSSTLGLIGNS*GKQPCV Trigger: GACACAAGGCTGTTTTCCTCAGCTGTTTCCTATAAG...TCCCAGAGTAGATGATGTGTCAGAGTTCTTCCTGACAACTGGAGTTAAACACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023348.11 ENSMUST00000162512.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTAACTCCAGTTGTCAGGAAGAACTCTGACACATCATCTACTCTGGGAGCAAAGCATTTCAACAGATaGACTCCAGAATTGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: CLTPVVRKNSDTSSTLGAKHFNR*TPELVT Trigger: AGTGACCAATTCTGGAGTCCATCTGTTGAAATGCTT...TGCTCCCAGAGTAGATGATGTGTCAGAGTTCTTCCTGACAACTGGAGTTAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023348.11 ENSMUST00000162512.8 |
||
| 3UTR CAA 72 bp | AGGGTCTCACTTCATGCACTTGTATATGCTCTGGACTaGTCAGTTAAAATAGAAAAGCCAGCTAGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSLHALVYALD*SVKIEKPASIC Trigger: ACAGATGCTAGCTGGCTTTTCTATTTTAACTGACAAGTCCAGAGCATATACAAGTGCATGAAGTGAGACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTTCTAGGTGTTTAACTCCAGTTGTCAGGAAGAACTCTGACACATCATCTTCTATAGCCATACCCTaGCATGTCCACCAATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSSRCLTPVVRKNSDTSSSIAIP*HVHQCK Trigger: TTTACATTGGTGGACATGCCAGGGTATGGCTATAGA...AGATGATGTGTCAGAGTTCTTCCTGACAACTGGAGTTAAACACCTAGAAGAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023348.11 ENSMUST00000162512.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTTTAACTCCAGTTGTCAGGAAGAACTCTGACACATCATCTACTCTGGGACATCACATAAGGCAATaGAAATTCTTCACACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCLTPVVRKNSDTSSTLGHHIRQ*KFFTHF Trigger: GAAATGTGTGAAGAATTTGCATTGCCTTATGTGATG...TCCCAGAGTAGATGATGTGTCAGAGTTCTTCCTGACAACTGGAGTTAAACACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023348.11 ENSMUST00000162512.8 |
||
| 3UTR CAA 72 bp | ACATGCAGCTGTCTTCGGTATTATAACTTGTTAGCTTaGTTATCTTTCATAGCTAAGGTGCCGATAGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TCSCLRYYNLLA*LSFIAKVPIVT Trigger: GGTGACTATCGGCACCTTAGCTATGAAAGATAACAAAGCTAACAAGTTATAATACCGAAGACAGCTGCATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACAGTTCTGCTTTTGGCAGAAGGATGGCTTTCAAAGTAATTATTTTGACACATCACATAAGGCAATaGAAATTCTTCACACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDSSAFGRRMAFKVIILTHHIRQ*KFFTHF Trigger: GAAATGTGTGAAGAATTTGCATTGCCTTATGTGATG...TGTCAAAATAATTACTTTGAAAGCCATCCTTCTGCCAAAAGCAGAACTGTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS TCA 90 bp | CCGGCTGCTGCAAACTCGGGGCGTGGTCGAGGCGGACGGCGGAGCTaGGGTACTCGATGCGGTTCCGGGCGGTGGCCTCAAAGATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PAAANSGRGRGGRRS*GTRCGSGRWPQRCS Trigger: AGAGCATCTTTGAGGCCACCGCCCGGAACCGCATCGAGTACCTCAGCTCCGCCGTCCGCCTCGACCACGCCCCGAGTTTGCAGCAGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161436.2 ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS CCA 90 bp | CTTCGGCCTATGAAACACACCTCCGGCTGCTGCAAACTCGGGGCGTaGTCGAGGCGGACGGCGGAGCTGAGGTACTCGATGCGGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRPMKHTSGCCKLGA*SRRTAELRYSMRFR Trigger: CCGGAACCGCATCGAGTACCTCAGCTCCGCCGTCCGCCTCGACCACGCCCCGAGTTTGCAGCAGCCGGAGGTGTGTTTCATAGGCCGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS GCA 90 bp | AAGAGTCTCTGTTCGATAAGGCCAGGCCCCGAGTCCGCGGCGAGGTaGTGCCCCAGTTCCCGCAGCGGGTACACTACCTTCGTTAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSLCSIRPGPESAAR*CPSSRSGYTTFVSC Trigger: ACAGCTAACGAAGGTAGTGTACCCGCTGCGGGAACTGGGGCAGCACCTCGCCGCGGACTCGGGGCCTGGCCTTATCGAACAGAGACTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161436.2 ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS-3UTR CAA 90 bp | ATGTACAACTGGGAAGAGGTGTGTCCCTGCCTCATCCTCTGGTCCCTGGGCAGGGAGGATTTTCCAACATaGCTTCGGCCTATGAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: MYNWEEVCPCLILWSLGREDFPT*LRPMKH Trigger: GTGTTTCATAGGCCGAAGCAATGTTGGAAAATCCTC...CCTGCCCAGGGACCAGAGGATGAGGCAGGGACACACCTCTTCCCAGTTGTACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS TCA 90 bp | ATAAGGCCTTTATCAAAGAGGATTTTCCAACATTGCTTCGGCCTATaGAACACACCTCCGGCTGCTGCAAACTCGGGGCGTGGTCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IRPLSKRIFQHCFGL*NTPPAAANSGRGRG Trigger: GCCTCGACCACGCCCCGAGTTTGCAGCAGCCGGAGGTGTGTTTCATAGGCCGAAGCAATGTTGGAAAATCCTCTTTGATAAAGGCCTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS-3UTR CAA 90 bp | AATTCCTGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGGCTGAGGAAAACAGCCTaGTGTCTGCGTGTTAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: NSWAKHIQVTTGGLQIVRLRKTA*CLRVNK Trigger: TTTGTTAACACGCAGACACAAGGCTGTTTTCCTCAG...CCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCAGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162512.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGTTTAACTCCAGTTGTCAGGAAGAACTCTGACACATCATCTACTCTGGGAGAGGATTTTCCAACATaGCTTCGGCCTATGAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: RCLTPVVRKNSDTSSTLGEDFPT*LRPMKH Trigger: GTGTTTCATAGGCCGAAGCAATGTTGGAAAATCCTC...TCCCAGAGTAGATGATGTGTCAGAGTTCTTCCTGACAACTGGAGTTAAACACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023348.11 ENSMUST00000162512.8 |
||
| CDS TCA 90 bp | ATAAGGCCTTTATCAAAGAGGATTTTCCAACATTGCTTCGGCCTATaGAACACACCTTCGTTAGCTGTTTCTGTGGCAGCCTTAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: IRPLSKRIFQHCFGL*NTPSLAVSVAALAL Trigger: AAGTGCTAAGGCTGCCACAGAAACAGCTAACGAAGGTGTGTTTCATAGGCCGAAGCAATGTTGGAAAATCCTCTTTGATAAAGGCCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023348.11 |
||
| CDS-3UTR CAA 90 bp | TCTAGGTGTTTAACTCCAGTTGTCAGGAAGAACTCTGACACATCATCTACTCTGCTGAGGAAAACAGCCTaGTGTCTGCGTGTTAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRCLTPVVRKNSDTSSTLLRKTA*CLRVNK Trigger: TTTGTTAACACGCAGACACAAGGCTGTTTTCCTCAG...CAGAGTAGATGATGTGTCAGAGTTCTTCCTGACAACTGGAGTTAAACACCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023348.11 ENSMUST00000162512.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTCTAGGAACTTAGCAATTATGATCTCTTGCATCTGCCAATACTTAGGTGAGGATTTTCCAACATaGCTTCGGCCTATGAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: FFSRNLAIMISCICQYLGEDFPT*LRPMKH Trigger: GTGTTTCATAGGCCGAAGCAATGTTGGAAAATCCTC...ACCTAAGTATTGGCAGATGCAAGAGATCATAATTGCTAAGTTCCTAGAGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162479.2 |
||
| CDS TCA 72 bp | GCAAACTCGGGGCGTGGTCGAGGCGGACGGCGGAGCTaGGGTACTCGATGCGGTTCCGGGCGGTGGCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ANSGRGRGGRRS*GTRCGSGRWPQ Trigger: TTGAGGCCACCGCCCGGAACCGCATCGAGTACCTCAGCTCCGCCGTCCGCCTCGACCACGCCCCGAGTTTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161436.2 ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS GCA 72 bp | GGTACTCGATGCGGTTCCGGGCGGTGGCCTCAAAGATaGTCTCCGCCCGCCCGATGTCCTCCAGGCTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GTRCGSGRWPQR*SPPARCPPGSG Trigger: ACCCGAGCCTGGAGGACATCGGGCGGGCGGAGAGCATCTTTGAGGCCACCGCCCGGAACCGCATCGAGTACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161436.2 ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS CCA 72 bp | TTTGTGTGCCCCTCCGGCTGCTGCAAACTCGGGGCGTaGTCGAGGCGGACGGCGGAGCTGAGGTACTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: FVCPSGCCKLGA*SRRTAELRYSM Trigger: CATCGAGTACCTCAGCTCCGCCGTCCGCCTCGACCACGCCCCGAGTTTGCAGCAGCCGGAGGGGCACACAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161436.2 |
||
| CDS GCA 72 bp | ACATTGCTTCGGCCTATGAAACACACCTCCGGCTGCTaGAAACTCGGGGCGTGGTCGAGGCGGACGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TLLRPMKHTSGC*KLGAWSRRTAE Trigger: CTCCGCCGTCCGCCTCGACCACGCCCCGAGTTTGCAGCAGCCGGAGGTGTGTTTCATAGGCCGAAGCAATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS GCA 72 bp | CCAACATTGCTTCGGCCTATGAAACACACCTCCGGCTaGTGCAAACTCGGGGCGTGGTCGAGGCGGACGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PTLLRPMKHTSG*CKLGAWSRRTA Trigger: CGCCGTCCGCCTCGACCACGCCCCGAGTTTGCAGCAGCCGGAGGTGTGTTTCATAGGCCGAAGCAATGTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS CCA 72 bp | ATGAAACACACCTCCGGCTGCTGCAAACTCGGGGCGTaGTCGAGGCGGACGGCGGAGCTGAGGTACTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: MKHTSGCCKLGA*SRRTAELRYSM Trigger: CATCGAGTACCTCAGCTCCGCCGTCCGCCTCGACCACGCCCCGAGTTTGCAGCAGCCGGAGGTGTGTTTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS TCA 72 bp | TTATCAAAGAGGATTTTCCAACATTGCTTCGGCCTATaGAACACACCTCCGGCTGCTGCAAACTCGGGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LSKRIFQHCFGL*NTPPAAANSGR Trigger: ACGCCCCGAGTTTGCAGCAGCCGGAGGTGTGTTTCATAGGCCGAAGCAATGTTGGAAAATCCTCTTTGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS CAA 72 bp | GAAAATAAGGCCTTTATCAAAGAGGATTTTCCAACATaGCTTCGGCCTATGAAACACACCTCCGGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ENKAFIKEDFPT*LRPMKHTSGCC Trigger: GCAGCAGCCGGAGGTGTGTTTCATAGGCCGAAGCAATGTTGGAAAATCCTCTTTGATAAAGGCCTTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162479.2 ENSMUST00000162512.8 |
||
| CDS TCA 72 bp | TTATCAAAGAGGATTTTCCAACATTGCTTCGGCCTATaGAACACACCTTCGTTAGCTGTTTCTGTGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSKRIFQHCFGL*NTPSLAVSVAA Trigger: GGCTGCCACAGAAACAGCTAACGAAGGTGTGTTTCATAGGCCGAAGCAATGTTGGAAAATCCTCTTTGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023348.11 |
||
| CDS TCA 72 bp | ACTCCAGAATTGGTCACTGCACTTATAGGAAACAGCTaGGGAAAACAGCCTTGTGTCTGCGTGTTAACAAAC | + |
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Preference number: 6 (lower is better) Translates to: TPELVTALIGNS*GKQPCVCVLTN Trigger: GTTTGTTAACACGCAGACACAAGGCTGTTTTCCTCAGCTGTTTCCTATAAGTGCAGTGACCAATTCTGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023348.11 ENSMUST00000161436.2 ENSMUST00000162512.8 |
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| CDS CAA 72 bp | CACTGCACTTATAGGAAACAGCTGAGGAAAACAGCCTaGTGTCTGCGTGTTAACAAACTTCTGAATCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: HCTYRKQLRKTA*CLRVNKLLNLE Trigger: CTCCAGATTCAGAAGTTTGTTAACACGCAGACACAAGGCTGTTTTCCTCAGCTGTTTCCTATAAGTGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023348.11 ENSMUST00000161436.2 ENSMUST00000162512.8 |
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| CDS CAA 90 bp | AGAATTGGTCACTGCACTTATAGGAAACAGCTGAGGAAAACAGCCTaGTGTCTGCGTGTTAACAAACTTCTGAATCTGGAGCACTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RIGHCTYRKQLRKTA*CLRVNKLLNLEHLF Trigger: AAACAAGTGCTCCAGATTCAGAAGTTTGTTAACACGCAGACACAAGGCTGTTTTCCTCAGCTGTTTCCTATAAGTGCAGTGACCAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023348.11 ENSMUST00000161436.2 ENSMUST00000162512.8 |
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| CDS CCA 72 bp | CTTCCTGTTATATCTGCGATAAAGCATTTCAACAGATaGACTCCAGAATTGGTCACTGCACTTATAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: LPVISAIKHFNR*TPELVTALIGN Trigger: GTTTCCTATAAGTGCAGTGACCAATTCTGGAGTCCATCTGTTGAAATGCTTTATCGCAGATATAACAGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023348.11 ENSMUST00000161436.2 ENSMUST00000162512.8 |
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| CDS CAA 72 bp | GAAAATAAGGCCTTTATCAAAGAGGATTTTCCAACATaGCTTCGGCCTATGAAACACACCTTCGTTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ENKAFIKEDFPT*LRPMKHTFVSC Trigger: ACAGCTAACGAAGGTGTGTTTCATAGGCCGAAGCAATGTTGGAAAATCCTCTTTGATAAAGGCCTTATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023348.11 |
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