Pregenerated sensors for GTPBP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021149Ensembl transcript IDs: ENSMUST00000021574.8, ENSMUST00000222098.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACAGGCTCACCTGTCCAAGGTTCTCTCTCCAGGTGGCATATGGTaGGTGAGGATGGATATGGATATGGATAACAAAGAGCTTCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: TQAHLSKVLSPGGIW*VRMDMDMDNKELPW Trigger: CCAAGGAAGCTCTTTGTTATCCATATCCATATCCATCCTCACTCACCATATGCCACCTGGAGAGAGAACCTTGGACAGGTGAGCCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CCA 90 bp | CTGTACCAAACATCCGAGGGAAGAACTACAAGGGAAGGATTTGCTTaGCTTTCTGTGCTTGCCCCTTCTTGGCTGTTGTTTGATCTGACC | + |
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Preference number: 1 (lower is better) Translates to: LYQTSEGRTTREGFA*LSVLAPSWLLFDLT Trigger: GGTCAGATCAAACAACAGCCAAGAAGGGGCAAGCACAGAAAGCCAAGCAAATCCTTCCCTTGTAGTTCTTCCCTCGGATGTTTGGTACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR GCA 90 bp | TTCCTCTTCCCAGACAGCAAGTGCTTGGGCTTCATATCAAACACATaGCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: FLFPDSKCLGFISNT*LSASPFFPKRFIFF Trigger: GAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAAGCCCAAGCACTTGCTGTCTGGGAAGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR TCA 90 bp | AGGCTCACCTGTCCAAGGTTCTCTCTCCAGGTGGCATATGGTGAGTaGGGATGGATATGGATATGGATAACAAAGAGCTTCCTTGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RLTCPRFSLQVAYGE*GWIWIWITKSFLGF Trigger: AAAACCAAGGAAGCTCTTTGTTATCCATATCCATATCCATCCTCACTCACCATATGCCACCTGGAGAGAGAACCTTGGACAGGTGAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR GCA 90 bp | TATCTCCTGTCCTTTTTACCAGCTTTCCTCTTCCCAGACAGCAAGTaGTTGGGCTTCATATCAAACACATGCCTATCAGCTTCCCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: YLLSFLPAFLFPDSK*LGFISNTCLSASPF Trigger: GAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAAGCCCAAGCACTTGCTGTCTGGGAAGAGGAAAGCTGGTAAAAAGGACAGGAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR GCA 90 bp | GTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCTaGAGGGCTAACATGGCTCTGTCTTGCATAGGAAACAGCTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: VLSSFIHQNANSGSS*RANMALSCIGNSFP Trigger: AGGAAAGCTGTTTCCTATGCAAGACAGAGCCATGTTAGCCCTGCAGCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR TCA 90 bp | GGTGTTTCACAAGGACCTGTAGTTTCAGCTACAACCCAACACCTCTaGCTCCTATGCAGATATCTTCATTCACATGCGCATACCCTACAA | + |
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Preference number: 1 (lower is better) Translates to: GVSQGPVVSATTQHL*LLCRYLHSHAHTLQ Trigger: TTGTAGGGTATGCGCATGTGAATGAAGATATCTGCATAGGAGTCAGAGGTGTTGGGTTGTAGCTGAAACTACAGGTCCTTGTGAAACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CCA 90 bp | ATCTTAATGACCCGAAAATACCACAAGTGCCAGCCAGATGCGGTCTaGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATAC | + |
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Preference number: 1 (lower is better) Translates to: ILMTRKYHKCQPDAV*GDHEIGYFLLVRKY Trigger: GTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGCATCTGGCTGGCACTTGTGGTATTTTCGGGTCATTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR GCA 90 bp | AAGCTGGCTCTAGATGGCTCAGGAGTTAAGAATGTATGCTGCACTTaGAAAGGACCTGAGTTCAATTCCCAGAACCATTATTGGGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: KLALDGSGVKNVCCT*KGPEFNSQNHYWVF Trigger: AAACACCCAATAATGGTTCTGGGAATTGAACTCAGGTCCTTTGCAAGTGCAGCATACATTCTTAACTCCTGAGCCATCTAGAGCCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR GCA 90 bp | CTAAAGAAGCTGGCTCTAGATGGCTCAGGAGTTAAGAATGTATGCTaGACTTGCAAAGGACCTGAGTTCAATTCCCAGAACCATTATTGG | + |
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Preference number: 1 (lower is better) Translates to: LKKLALDGSGVKNVC*TCKGPEFNSQNHYW Trigger: CCAATAATGGTTCTGGGAATTGAACTCAGGTCCTTTGCAAGTGCAGCATACATTCTTAACTCCTGAGCCATCTAGAGCCAGCTTCTTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR GCA 90 bp | ATCCTAAAGAAGCTGGCTCTAGATGGCTCAGGAGTTAAGAATGTATaGTGCACTTGCAAAGGACCTGAGTTCAATTCCCAGAACCATTAT | + |
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Preference number: 1 (lower is better) Translates to: ILKKLALDGSGVKNV*CTCKGPEFNSQNHY Trigger: ATAATGGTTCTGGGAATTGAACTCAGGTCCTTTGCAAGTGCAGCATACATTCTTAACTCCTGAGCCATCTAGAGCCAGCTTCTTTAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR GCA 90 bp | ATGTTAGAGGCTAGGGGAGATAGTTCAGCAATTAAGAGTGTTCACTaGTCTTCCAGAGTATCTCAGTTAAGTTCCCAACACCCGTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: MLEARGDSSAIKSVH*SSRVSQLSSQHPFK Trigger: TTTGAACGGGTGTTGGGAACTTAACTGAGATACTCTGGAAGAGCAGTGAACACTCTTAATTGCTGAACTATCTCCCCTAGCCTCTAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR TCA 90 bp | ACCTCTCCATGTGCTCAGGGATCTTTTAATAGGAATAATGTCATATaGCAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: TSPCAQGSFNRNNVI*QCCLVSSTKMLTQE Trigger: TTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATGACATTATTCCTATTAAAAGATCCCTGAGCACATGGAGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR TCA 90 bp | TTAAAGAATGATTCTCTTCACACACACACACAGGATTCATTAGAATaGTTTACACGCTGTATTCCAGATAATCCAATAATGGCTGCCTAT | + |
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Preference number: 1 (lower is better) Translates to: LKNDSLHTHTQDSLE*FTRCIPDNPIMAAY Trigger: ATAGGCAGCCATTATTGGATTATCTGGAATACAGCGTGTAAATCATTCTAATGAATCCTGTGTGTGTGTGTGAAGAGAATCATTCTTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR GCA 90 bp | GAGCACTTGACTATCTTGTTTGGAAAAATAGATATTCAAGACTTTTaGCGATACTTGAGCTGGTCACTGTTGAATTTACAAACCATGTAT | + |
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Preference number: 1 (lower is better) Translates to: EHLTILFGKIDIQDF*RYLSWSLLNLQTMY Trigger: ATACATGGTTTGTAAATTCAACAGTGACCAGCTCAAGTATCGGCAAAAGTCTTGAATATCTATTTTTCCAAACAAGATAGTCAAGTGCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTACCCACTCACTCCAGCATGGGGCTCAGTGTACCTCTCCATGTGCTCAGGGACCCAAACTGCGCAGTaGGCACAGCACTGCACACTT | + |
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Preference number: 2 (lower is better) Translates to: RYPLTPAWGSVYLSMCSGTQTAQ*AQHCTL Trigger: AAGTGTGCAGTGCTGTGCTCACTGCGCAGTTTGGGT...CCCTGAGCACATGGAGAGGTACACTGAGCCCCATGCTGGAGTGAGTGGGTACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTTCTACTGCAGCTCGGAGGTaGGCCAGGGCTGTGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: AYQLPLSSPSDSSSSELSTAARR*ARAVMA Trigger: GGCCATCACAGCCCTGGCCCACCTCCGAGCTGCAGT...AGAAAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTACCCACTCACTCCAGCATGGGGCTCAGTGTACCTCTCCATGTGCTCAGGGCACTTGCAAAGGACCTaGGTTCAATTCCCAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: RYPLTPAWGSVYLSMCSGHLQRT*VQFPEP Trigger: TGGTTCTGGGAATTGAACTCAGGTCCTTTGCAAGTG...CCCTGAGCACATGGAGAGGTACACTGAGCCCCATGCTGGAGTGAGTGGGTACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR CCA 90 bp | CCACTACAAAACAGTTTTCCTCCACCCACGCAGCCTCCGTACACCAATAAGTCTTGCGACTCCGCGCTGTaGAAGAGGGTGGAACAGATT | + |
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Preference number: 2 (lower is better) Translates to: PLQNSFPPPTQPPYTNKSCDSAL*KRVEQI Trigger: AATCTGTTCCACCCTCTTCCACAGCGCGGAGTCGCA...AGACTTATTGGTGTACGGAGGCTGCGTGGGTGGAGGAAAACTGTTTTGTAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATACCTTCTGGGATTAAAGACGTaGGCCACCACCCCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AVWGDHEIGYFLLVRKYLLGLKT*ATTPWL Trigger: CAGCCAGGGGGTGGTGGCCCACGTCTTTAATCCCAG...AAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR TCA 90 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATACCTTTACCTAAGCCAGCGCTaGGCCCCAGCACCAAGCATT | + |
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Preference number: 2 (lower is better) Translates to: AVWGDHEIGYFLLVRKYLYLSQR*APAPSI Trigger: AATGCTTGGTGCTGGGGCTCAGCGCTGGCTTAGGTA...AAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR GCA 90 bp | CATGCCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTACTCCGAGACCTTCTTaGCTGGACTGCATAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: HAYQLPLSSPSDSSSSELTPRPS*LDCIVG Trigger: GCCCACTATGCAGTCCAGGCAAGAAGGTCTCGGAGT...AAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATACCTTACGTGCAGGAGCTACTaGACAGGGAGGCCTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: AVWGDHEIGYFLLVRKYLTCRSY*TGRPVR Trigger: TCTCACAGGCCTCCCTGTCCAGTAGCTCCTGCACGT...AAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR GCA 90 bp | CCACTACAAAACAGTTTTCCTCCACCCACGCAGCCTCCGTACACCAATAAGTCTCATAAAAACCCAAACTaGGCAGTGAGCACAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: PLQNSFPPPTQPPYTNKSHKNPN*AVSTAL Trigger: CAGTGCTGTGCTCACTGCGCAGTTTGGGTTTTTATG...AGACTTATTGGTGTACGGAGGCTGCGTGGGTGGAGGAAAACTGTTTTGTAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTACCCACTCACTCCAGCATGGGGCTCAGTGTACCTCTCCATGTGCTCAGGGCCTTATCAAAAGATCTaGATTAAAGGTGTGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: RYPLTPAWGSVYLSMCSGPYQKI*IKGVSS Trigger: AGAAGACACACCTTTAATCCAGATCTTTTGATAAGG...CCCTGAGCACATGGAGAGGTACACTGAGCCCCATGCTGGAGTGAGTGGGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CAA 90 bp | CTCCTGTCCTTTTTACCAGCTTTCCTCTTCCCAGACAGCAAGTGCTaGGGCTTCATATCAAACACATGCCTATCAGCTTCCCCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLSFLPAFLFPDSKC*GFISNTCLSASPFF Trigger: GAAGAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAAGCCCAAGCACTTGCTGTCTGGGAAGAGGAAAGCTGGTAAAAAGGACAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR CAA 90 bp | AAGCACTGTACCAAACATCCGAGGGAAGAACTACAAGGGAAGGATTaGCTTGGCTTTCTGTGCTTGCCCCTTCTTGGCTGTTGTTTGATC | + |
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Preference number: 2 (lower is better) Translates to: KHCTKHPREELQGKD*LGFLCLPLLGCCLI Trigger: GATCAAACAACAGCCAAGAAGGGGCAAGCACAGAAAGCCAAGCAAATCCTTCCCTTGTAGTTCTTCCCTCGGATGTTTGGTACAGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CAA 90 bp | CAGCCAGATGCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTaGGTGAGAAAATACCTTATGCTAAACCCAGATACCAGGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: QPDAVWGDHEIGYFL*VRKYLMLNPDTREV Trigger: CACTTCCCTGGTATCTGGGTTTAGCATAAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGCATCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR TCA 90 bp | CATGCCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTGTTTTCTTTTCCTCGTaGCACTCCGAGACCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: HAYQLPLSSPSDSSSSELVFFSS*HSETFL Trigger: CAAGAAGGTCTCGGAGTGTCACGAGGAAAAGAAAAC...AAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR GCA 90 bp | TATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTTCTTCAAGGGCTGTGATGGCCTaGATCTCAATGGTGTTCCGA | + |
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Preference number: 2 (lower is better) Translates to: YQLPLSSPSDSSSSELSSRAVMA*ISMVFR Trigger: TCGGAACACCATTGAGATGCAGGCCATCACAGCCCT...TGAAGAAAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR GCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTAACCCATGTCCACACTaGTCAGACAGATCCATCACA | + |
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Preference number: 2 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTNPCPH*SDRSIT Trigger: TGTGATGGATCTGTCTGAGCAGTGTGGACATGGGTT...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR GCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTCATAAAAACCCAAACTaGGCAGTGAGCACAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTHKNPN*AVSTAL Trigger: CAGTGCTGTGCTCACTGCGCAGTTTGGGTTTTTATG...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| 3UTR-3UTR GCA 90 bp | TGGATCAATAAAAATCCTCATGTGGTTTGCAGCGATGGCAATCTCTGTGGTCTTAGGAGGATAGCCTTCTaGCTAGACCTCCCAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: WINKNPHVVCSDGNLCGLRRIAF*LDLPAG Trigger: ACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCT...AAGACCACAGAGATTGCCATCGCTGCAAACCACATGAGGATTTTTATTGATCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCTTGGGCTTCATATCAAACACATGCCTATCAGCTTCCCCTTTCTTCCCCGCTCCCTCTTCTTCTTaGGCTCTTCAATCTCCATTC | + |
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Preference number: 2 (lower is better) Translates to: KCLGFISNTCLSASPFFPAPSSS*ALQSPF Trigger: GAATGGAGATTGAAGAGCCCAAGAAGAAGAGGGAGC...GGGGAAGAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAAGCCCAAGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTCAGTTCGGGGCATCCTaGGTCCCTGTTTATTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: HAYQLPLSSPSDSSSSELQFGAS*VPVYSF Trigger: AAAAGAATAAACAGGGACCCAGGATGCCCCGAACTG...AAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR CCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTCGCTGTGGAAGAGGGTaGAACAGATTCTTCTCGTTT | + |
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Preference number: 2 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTRCGRG*NRFFSF Trigger: AAACGAGAAGAATCTGTTCCACCCTCTTCCACAGCG...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR TCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTCTTTCTTCACCATCTTaGCATCCCGAAGACCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTLSSPS*HPEDQK Trigger: TTTCTGGTCTTCGGGATGTCAAGATGGTGAAGAAAG...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR TCA 90 bp | TGGATCAATAAAAATCCTCATGTGGTTTGCAGCGATGGCAATCTCTGTGGTCTTATCTTACCCCTCTTATaGCCTCTGTGGGTACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: WINKNPHVVCSDGNLCGLILPLL*PLWVPG Trigger: GCCAGGTACCCACAGAGGTCATAAGAGGGGTAAGAT...AAGACCACAGAGATTGCCATCGCTGCAAACCACATGAGGATTTTTATTGATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTTCTCCTTCTTGCCTGGACTaGATAGTGGGCATTGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: AYQLPLSSPSDSSSSELSPSCLD*IVGIVF Trigger: AAAAACAATGCCCACTATGCAGTCCAGGCAAGAAGG...AGAAAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCTTGGGCTTCATATCAAACACATGCCTATCAGCTTCCCCTTTCTTCCCCACCAGAAACATCACGTaGAGTTCTAGAACAACTGCG | + |
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Preference number: 2 (lower is better) Translates to: KCLGFISNTCLSASPFFPTRNIT*SSRTTA Trigger: CGCAGTTGTTCTAGAACTCCACGTGATGTTTCTGGT...GGGGAAGAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAAGCCCAAGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACTCCTATGCAGATATCTTCATTCACATGCGCATACCCTACAATAGACACGAGGGAAGGATTTGCTTaGCTTTCTGTGCTTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LTPMQISSFTCAYPTIDTREGFA*LSVLAP Trigger: AGGGGCAAGCACAGAAAGCCAAGCAAATCCTTCCCT...CGTGTCTATTGTAGGGTATGCGCATGTGAATGAAGATATCTGCATAGGAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTACAAAACAGTTTTCCTCCACCCACGCAGCCTCCGTACACCAATAAGTCTTTAAACTGTTCCAACTaGAGAGGACATTATCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PLQNSFPPPTQPPYTNKSLNCSN*RGHYLL Trigger: CAGGAGATAATGTCCTCTTCAGTTGGAACAGTTTAA...AGACTTATTGGTGTACGGAGGCTGCGTGGGTGGAGGAAAACTGTTTTGTAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR TCA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCCCAGGTGGCATATGGTaGGTGAGGATGGATATGGAT | + |
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Preference number: 2 (lower is better) Translates to: HMTVLSSFIHQNANSGSSPGGIW*VRMDMD Trigger: ATCCATATCCATCCTCACTCACCATATGCCACCTGG...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR CCA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCTCCCAAAATGGCTGCTaGAGAAAGAGTCCTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: HMTVLSSFIHQNANSGSSSQNGC*RKSPLP Trigger: GGGCAAAGGACTCTTTCTCCAGCAGCCATTTTGGGA...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATACCTTCTGGCACGCATTATGTaGTATACATACAGATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AVWGDHEIGYFLLVRKYLLARIM*YTYRSR Trigger: CCTGGATCTGTATGTATACCACATAATGCGTGCCAG...AAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR GCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTTTCATATCAAACACATaGCTATCAGCTTCCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTFISNT*LSASPF Trigger: GAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAA...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTTTCTTAACACTTAGTAGGGTTTaGCAGTTTCCAGCAAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KCKEDSLLPRPPSRYTFLTLSRV*QFPAKQ Trigger: CTGCTTTGCTGGAAACTGGCAAACCCTACTAAGTGT...TAAGAAAGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
||
| 3UTR-3UTR GCA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCATAAAGGCCAGAAGCTaGAGCCTAACAGGAAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: HMTVLSSFIHQNANSGSSIKARS*SLTGST Trigger: AGTGCTTCCTGTTAGGCTGCAGCTTCTGGCCTTTAT...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR GCA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCTTGGCTTTCTGTGCTTaGCCCTTCTTGGCTGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: HMTVLSSFIHQNANSGSSLAFCA*PFLAVV Trigger: AACAACAGCCAAGAAGGGGCAAGCACAGAAAGCCAA...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAATCACTCCTTCTGGGATaGAAGGGGGTCTCTCCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: FWSTDGDSKFYNTPYHTQSLLLG*KGVSPY Trigger: ATAAGGAGAGACCCCCTTTCATCCCAGAAGGAGTGA...TTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| 3UTR-3UTR TCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTAATAGGTACTTTAGGTaGCAAAAGTCCCACTACAAA | + |
|
Preference number: 2 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTNRYFR*QKSHYK Trigger: TTTGTAGTGGGACTTTTGTCACCTAAAGTACCTATT...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| 3UTR-3UTR TCA 90 bp | AAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTTTCTTAGAAGCACTGACTGTCTaGAGATTATCCTCTAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: KCKEDSLLPRPPSRYTFLEALTV*RLSSNL Trigger: CAGATTAGAGGATAATCTTCAGACAGTCAGTGCTTC...TAAGAAAGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR TCA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCCCTAACAGGAAGCACTaGCTGTCTGAAGATTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: HMTVLSSFIHQNANSGSSPNRKH*LSEDYP Trigger: AGGATAATCTTCAGACAGTCAGTGCTTCCTGTTAGG...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR GCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTAATTTTCCTGACTTCTaGCAAGGGAAATACAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTNFPDF*QGKYKL Trigger: GAGTTTGTATTTCCCTTGGCAGAAGTCAGGAAAATT...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR GCA 90 bp | AAACTCCAGGATGTCTTTTATGCCATCACCCCTGTTCTGCTGCAACATTTAAATTACAAGGGAAGGATTTaGTTGGCTTTCTGTGCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: KLQDVFYAITPVLLQHLNYKGRI*LAFCAC Trigger: GCAAGCACAGAAAGCCAAGCAAATCCTTCCCTTGTA...ATTTAAATGTTGCAGCAGAACAGGGGTGATGGCATAAAAGACATCCTGGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR GCA 90 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATACCTTATATCTTCATTCACATaGGCATACCCTACAATAGAC | + |
|
Preference number: 2 (lower is better) Translates to: AVWGDHEIGYFLLVRKYLISSFT*AYPTID Trigger: GTCTATTGTAGGGTATGCGCATGTGAATGAAGATAT...AAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATCAATAAAAATCCTCATGTGGTTTGCAGCGATGGCAATCTCTGTGGTCTTCCCCACGGTGAACAATaGTTTGGTATTGTTTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: WINKNPHVVCSDGNLCGLPHGEQ*FGIVFC Trigger: ACAGAAAACAATACCAAACCATTGTTCACCGTGGGG...AAGACCACAGAGATTGCCATCGCTGCAAACCACATGAGGATTTTTATTGATCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGATCAATAAAAATCCTCATGTGGTTTGCAGCGATGGCAATCTCTGTGGTCTTAAGGAATGGACTTGCTaGTGTAGGCAAAGAGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: WINKNPHVVCSDGNLCGLKEWTC*CRQRAK Trigger: TTTTGCTCTTTGCCTACACCAGCAAGTCCATTCCTT...AAGACCACAGAGATTGCCATCGCTGCAAACCACATGAGGATTTTTATTGATCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATCAATAAAAATCCTCATGTGGTTTGCAGCGATGGCAATCTCTGTGGTCTTGGCTATCTGAGCACTTaGCTATCTTGTTTGGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: WINKNPHVVCSDGNLCGLGYLST*LSCLEK Trigger: TTTTTCCAAACAAGATAGTCAAGTGCTCAGATAGCC...AAGACCACAGAGATTGCCATCGCTGCAAACCACATGAGGATTTTTATTGATCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCTTCCCAGACAGCAAGTaGTTGGGCTTCATATCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FFWSTDGDSKFYNTPYHTFPDSK*LGFISN Trigger: GTTTGATATGAAGCCCAAGCACTTGCTGTCTGGGAA...GGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR GCA 90 bp | AAACTCCAGGATGTCTTTTATGCCATCACCCCTGTTCTGCTGCAACATTTAAATTGTATTACTCACACTTaGAAACCTGCTCTCCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: KLQDVFYAITPVLLQHLNCITHT*KPALPF Trigger: GAATGGGAGAGCAGGTTTGCAAGTGTGAGTAATACA...ATTTAAATGTTGCAGCAGAACAGGGGTGATGGCATAAAAGACATCCTGGAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCAGCAAGCATTTAAAAGTCATTCCCACTGTTTCTTTTGGTCAACAGATGTGGAAGAGTTCTAACTaGTCCTTTAACCCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QSSKHLKVIPTVSFGQQMWKSSN*SFNPCP Trigger: TGGACATGGGTTAAAGGAGCAGTTAGAACTCTTCCA...CATCTGTTGACCAAAAGAAACAGTGGGAATGACTTTTAAATGCTTGCTGCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAATTGGGCACAGCTAAATaGAATCTGTTCAGAACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: FWSTDGDSKFYNTPYHTQLGTAK*NLFRTS Trigger: TGAGGTTCTGAACAGATTGCATTTAGCTGTGCCCAA...TTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR GCA 90 bp | AAACTCCAGGATGTCTTTTATGCCATCACCCCTGTTCTGCTGCAACATTTAAATAATGTATGCTGCACTTaGAAAGGACCTGAGTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLQDVFYAITPVLLQHLNNVCCT*KGPEFN Trigger: ATTGAACTCAGGTCCTTTGCAAGTGCAGCATACATT...ATTTAAATGTTGCAGCAGAACAGGGGTGATGGCATAAAAGACATCCTGGAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CAA 90 bp | TTTGCAGCGATGGCAATCTCTGTGGTCTTTGTGAGTGAGGGTCTTTaGACGAACTCCAACAATTTTCATAAAGGAAATAATCTTAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: FAAMAISVVFVSEGL*TNSNNFHKGNNLND Trigger: GTCATTAAGATTATTTCCTTTATGAAAATTGTTGGAGTTCGTCAAAAGACCCTCACTCACAAAGACCACAGAGATTGCCATCGCTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCTATCATCTCTCTTGTTaGGCACAGCTAAATGCAATC | + |
|
Preference number: 2 (lower is better) Translates to: FFWSTDGDSKFYNTPYHTYHLSC*AQLNAI Trigger: GATTGCATTTAGCTGTGCCCAACAAGAGAGATGATA...GGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAATATGTTGAATTTTCCTaGCTTCTGCCAAGGGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: FWSTDGDSKFYNTPYHTQYVEFS*LLPREI Trigger: TATTTCCCTTGGCAGAAGTCAGGAAAATTCAACATA...TTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CAA 90 bp | CAGCCCTCCAGTGTTTTCATTTCCATTCTGAAATCTTTTACATACTaGTATGTCCTATTGTACATAACTGGGTTTGCATCCTGTATATAC | + |
|
Preference number: 2 (lower is better) Translates to: QPSSVFISILKSFTY*YVLLYITGFASCIY Trigger: GTATATACAGGATGCAAACCCAGTTATGTACAATAGGACATACAAGTATGTAAAAGATTTCAGAATGGAAATGAAAACACTGGAGGGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CCA 72 bp | AAGCAGCTAGGCATGGTGAGCGTTCTCACAGCCACCTaGGTGTTGACTGTCTATCCCCATGTGTGTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: KQLGMVSVLTAT*VLTVYPHVCSM Trigger: CATGGAACACACATGGGGATAGACAGTCAACACCCAGGTGGCTGTGAGAACGCTCACCATGCCTAGCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CCA 72 bp | CTCCTAAAACCTTCCCCTGGTGACACCACTCTCCCATaGGTAACACAGGCTCACCTGTCCAAGGTTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLKPSPGDTTLP*VTQAHLSKVLS Trigger: AGAGAGAACCTTGGACAGGTGAGCCTGTGTTACCCATGGGAGAGTGGTGTCACCAGGGGAAGGTTTTAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR TCA 72 bp | CGGAACGCACTGGACATAAAAACCCAAACTGCGCAGTaGGCACAGCACTGCACACTTAGTAGGGTTTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RNALDIKTQTAQ*AQHCTLSRVCQ Trigger: CTGGCAAACCCTACTAAGTGTGCAGTGCTGTGCTCACTGCGCAGTTTGGGTTTTTATGTCCAGTGCGTTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| 3UTR TCA 72 bp | TTTCTGTGCTTGCCCCTTCTTGGCTGTTGTTTGATCTaGCCGTCTTGGTGCTCAGTCGTGCTTCTCGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: FLCLPLLGCCLI*PSWCSVVLLAD Trigger: GTCAGCGAGAAGCACGACTGAGCACCAAGACGGTCAGATCAAACAACAGCCAAGAAGGGGCAAGCACAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR TCA 72 bp | GTGGAAGTGCCCAATCCTGGTCCACAGGACTTGCTGTaGAACAAGCCACTGTACTGGAGCTTGAGTGGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VEVPNPGPQDLL*NKPLYWSLSGD Trigger: ATCACCACTCAAGCTCCAGTACAGTGGCTTGTTTCACAGCAAGTCCTGTGGACCAGGATTGGGCACTTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTACCCACTCACTCCAGCATGGGGCTCAGTGTACCTCTCCATGTGCTCAGGGTTGAGCTGGTCACTGTaGAATTTACAAACCATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RYPLTPAWGSVYLSMCSGLSWSL*NLQTMY Trigger: ATACATGGTTTGTAAATTCAACAGTGACCAGCTCAA...CCCTGAGCACATGGAGAGGTACACTGAGCCCCATGCTGGAGTGAGTGGGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR TCA 72 bp | CCACAAGTGCCAGCCAGATGCGGTCTGGGGAGATCATaGGATTGGCTACTTTCTGTTGGTGAGAAAATACCT | + |
|
Preference number: 3 (lower is better) Translates to: PQVPARCGLGRS*DWLLSVGEKIP Trigger: AGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGCATCTGGCTGGCACTTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR TCA 72 bp | GTTCTTTGTTCTGGGTCTCTCCTCTGGCCTGCATGCTaGGAGGGGAGTCCCCAACATGTTGGATCAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLCSGSLLWPAC*EGSPQHVGSIK Trigger: TTTTATTGATCCAACATGTTGGGGACTCCCCTCTCAGCATGCAGGCCAGAGGAGAGACCCAGAACAAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR TCA 72 bp | AGAGTATCTCAGTTAAGTTCCCAACACCCGTTCAAATaGGTGAGGAGTGCAGTCCTGAGACGTCTGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RVSQLSSQHPFK*VRSAVLRRLQA Trigger: AGCCTGCAGACGTCTCAGGACTGCACTCCTCACTCATTTGAACGGGTGTTGGGAACTTAACTGAGATACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR GCA 72 bp | CCAGACAGCAAGTGCTTGGGCTTCATATCAAACACATaGCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTC | + |
|
Preference number: 3 (lower is better) Translates to: PDSKCLGFISNT*LSASPFFPKRF Trigger: GAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAAGCCCAAGCACTTGCTGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| 3UTR GCA 72 bp | GTCGGTAGTCGCTGGATTCTCATAAAGGCCAGAAGCTaGAGCCTAACAGGAAGCACTGACTGTCTGAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: VGSRWILIKARS*SLTGSTDCLKI Trigger: AATCTTCAGACAGTCAGTGCTTCCTGTTAGGCTGCAGCTTCTGGCCTTTATGAGAATCCAGCGACTACCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR GCA 72 bp | TCAGGAAGTAGCTGCAGGGCTAACATGGCTCTGTCTTaGATAGGAAACAGCTTTCCTGTGGAAGTGCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SGSSCRANMALS*IGNSFPVEVPN Trigger: ATTGGGCACTTCCACAGGAAAGCTGTTTCCTATGCAAGACAGAGCCATGTTAGCCCTGCAGCTACTTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CCA 72 bp | GAAGGATTTGCTTGGCTTTCTGTGCTTGCCCCTTCTTaGCTGTTGTTTGATCTGACCGTCTTGGTGCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EGFAWLSVLAPS*LLFDLTVLVLS Trigger: ACTGAGCACCAAGACGGTCAGATCAAACAACAGCCAAGAAGGGGCAAGCACAGAAAGCCAAGCAAATCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CCA 72 bp | AACACAGGCTCACCTGTCCAAGGTTCTCTCTCCAGGTaGCATATGGTGAGTGAGGATGGATATGGATATGGA | + |
|
Preference number: 3 (lower is better) Translates to: NTGSPVQGSLSR*HMVSEDGYGYG Trigger: TCCATATCCATATCCATCCTCACTCACCATATGCCACCTGGAGAGAGAACCTTGGACAGGTGAGCCTGTGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CCA 72 bp | CATAGGAAACAGCTTTCCTGTGGAAGTGCCCAATCCTaGTCCACAGGACTTGCTGTGAAACAAGCCACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: HRKQLSCGSAQS*STGLAVKQATV Trigger: TACAGTGGCTTGTTTCACAGCAAGTCCTGTGGACCAGGATTGGGCACTTCCACAGGAAAGCTGTTTCCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR TCA 72 bp | CCATTCTCTTCCTTCGAGCTATCACTCCTTCTGGGATaGAAGGGGGTCTCTCCTTATCATCTCTCTTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PFSSFELSLLLG*KGVSPYHLSCW Trigger: CCAACAAGAGAGATGATAAGGAGAGACCCCCTTTCATCCCAGAAGGAGTGATAGCTCGAAGGAAGAGAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| 3UTR TCA 72 bp | CAGCCACCTCTTCCTAGTCCTAACAGCAATGAGAACTaGCGCCTAACACAGTTCAGCTCAAGGTCACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QPPLPSPNSNEN*RLTQFSSRSQT Trigger: TGTTTGTGACCTTGAGCTGAACTGTGTTAGGCGTCAGTTCTCATTGCTGTTAGGACTAGGAAGAGGTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CCA 72 bp | ACATCCGAGGGAAGAACTACAAGGGAAGGATTTGCTTaGCTTTCTGTGCTTGCCCCTTCTTGGCTGTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: TSEGRTTREGFA*LSVLAPSWLLF Trigger: AAACAACAGCCAAGAAGGGGCAAGCACAGAAAGCCAAGCAAATCCTTCCCTTGTAGTTCTTCCCTCGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTTCCTTATCATCTCTCTaGTTGGGCACAGCTAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: HAYQLPLSSPSDSSSSELSLSSL*LGTAKC Trigger: GCATTTAGCTGTGCCCAACAAGAGAGATGATAAGGA...AAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| 3UTR TCA 72 bp | CACCTGTCCAAGGTTCTCTCTCCAGGTGGCATATGGTaGGTGAGGATGGATATGGATATGGATAACAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLSKVLSPGGIW*VRMDMDMDNKE Trigger: CTCTTTGTTATCCATATCCATATCCATCCTCACTCACCATATGCCACCTGGAGAGAGAACCTTGGACAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR TCA 72 bp | AGGACTTGCTGTGAAACAAGCCACTGTACTGGAGCTTaGGTGGTGATTGCTGTTTTTCATAGGAGGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RTCCETSHCTGA*VVIAVFHRRCV Trigger: CACACACCTCCTATGAAAAACAGCAATCACCACTCAAGCTCCAGTACAGTGGCTTGTTTCACAGCAAGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR GCA 72 bp | CTGGCTCTAGATGGCTCAGGAGTTAAGAATGTATGCTaGACTTGCAAAGGACCTGAGTTCAATTCCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LALDGSGVKNVC*TCKGPEFNSQN Trigger: GTTCTGGGAATTGAACTCAGGTCCTTTGCAAGTGCAGCATACATTCTTAACTCCTGAGCCATCTAGAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR GCA 72 bp | AAGCTGGCTCTAGATGGCTCAGGAGTTAAGAATGTATaGTGCACTTGCAAAGGACCTGAGTTCAATTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KLALDGSGVKNV*CTCKGPEFNSQ Trigger: CTGGGAATTGAACTCAGGTCCTTTGCAAGTGCAGCATACATTCTTAACTCCTGAGCCATCTAGAGCCAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR GCA 72 bp | TGCTTTGTAGAGGTGAACCTCACCCTCACAGTTATCTaGCTACCTCTGCCTCAGAAGTATGTGATTAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CFVEVNLTLTVI*LPLPQKYVIKG Trigger: GCCTTTAATCACATACTTCTGAGGCAGAGGTAGGCAGATAACTGTGAGGGTGAGGTTCACCTCTACAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR TCA 72 bp | CAAGGACCTGTAGTTTCAGCTACAACCCAACACCTCTaGCTCCTATGCAGATATCTTCATTCACATGCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QGPVVSATTQHL*LLCRYLHSHAH Trigger: ATGCGCATGTGAATGAAGATATCTGCATAGGAGTCAGAGGTGTTGGGTTGTAGCTGAAACTACAGGTCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR TCA 72 bp | TGTCCAAGGTTCTCTCTCCAGGTGGCATATGGTGAGTaGGGATGGATATGGATATGGATAACAAAGAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CPRFSLQVAYGE*GWIWIWITKSF Trigger: GAAGCTCTTTGTTATCCATATCCATATCCATCCTCACTCACCATATGCCACCTGGAGAGAGAACCTTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR TCA 72 bp | GCTGTGAAACAAGCCACTGTACTGGAGCTTGAGTGGTaGTTGCTGTTTTTCATAGGAGGTGTGTGTGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: AVKQATVLELEW*LLFFIGGVCVS Trigger: ACTTACACACACACCTCCTATGAAAAACAGCAATCACCACTCAAGCTCCAGTACAGTGGCTTGTTTCACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGACTCCTATGCAGATATCTTCATTCACATGCGCATACCCTACAATAGACACGCCTCTAACATTTTCCTaGTTAGTGTCTCTCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTPMQISSFTCAYPTIDTPLTFS*LVSLWR Trigger: CCTCCAGAGAGACACTAACAAGGAAAATGTTAGAGG...CGTGTCTATTGTAGGGTATGCGCATGTGAATGAAGATATCTGCATAGGAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATACCTTCAGCCTTCTATTTCATaGCTTCTTAGACTCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AVWGDHEIGYFLLVRKYLQPSIS*LLRLLA Trigger: AGCAAGGAGTCTAAGAAGCAATGAAATAGAAGGCTG...AAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR GCA 72 bp | ACACCTCTGACTCCTATGCAGATATCTTCATTCACATaGGCATACCCTACAATAGACACGCAGACGTATACT | + |
|
Preference number: 3 (lower is better) Translates to: TPLTPMQISSFT*AYPTIDTQTYT Trigger: AGTATACGTCTGCGTGTCTATTGTAGGGTATGCGCATGTGAATGAAGATATCTGCATAGGAGTCAGAGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CCA 72 bp | TCTTATGACCTCTGTGGGTACCTGGCACGCATTATGTaGTATACATACAGATCCAGGCAAATAACCCATACA | + |
|
Preference number: 3 (lower is better) Translates to: SYDLCGYLARIM*YTYRSRQITHT Trigger: TGTATGGGTTATTTGCCTGGATCTGTATGTATACCACATAATGCGTGCCAGGTACCCACAGAGGTCATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR TCA 72 bp | CAGTTCAGAAGCATGGTAGAGGACTTCCTGTTCCCTTaGTGGCCTTATTTTGAGGATGTGTGTGAAAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: QFRSMVEDFLFP*WPYFEDVCEKI Trigger: TATCTTTTCACACACATCCTCAAAATAAGGCCATCAAGGGAACAGGAAGTCCTCTACCATGCTTCTGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CCA 72 bp | AGGATGGATATGGATATGGATAACAAAGAGCTTCCTTaGTTTTCACTGGGTTCACAGATTCCACAAGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: RMDMDMDNKELP*FSLGSQIPQGL Trigger: GAGTCCTTGTGGAATCTGTGAACCCAGTGAAAACCAAGGAAGCTCTTTGTTATCCATATCCATATCCATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTTTCTTATTATCATCTCTCTTGTaGGGCACAGCTAAATGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: KCKEDSLLPRPPSRYTFLLSSLL*GTAKCN Trigger: ATTGCATTTAGCTGTGCCCAACAAGAGAGATGATAA...TAAGAAAGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| 3UTR-3UTR CAA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCCTTGATGGCCTTATTTaGAGGATGTGTGTGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HMTVLSSFIHQNANSGSSLDGLI*RMCVKR Trigger: TCTTTTCACACACATCCTCAAAATAAGGCCATCAAG...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACTCCAGGATGTCTTTTATGCCATCACCCCTGTTCTGCTGCAACATTTAAATGCAATGGTTTTTACCTaGATGGAAATAGACCCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: KLQDVFYAITPVLLQHLNAMVFT*MEIDPN Trigger: GTTAGGGTCTATTTCCATCAAGGTAAAAACCATTGC...ATTTAAATGTTGCAGCAGAACAGGGGTGATGGCATAAAAGACATCCTGGAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CCA 72 bp | AAGCAAAGTCCTATTCCCTGCCACCACCACCCCTTTTaGTCATCAAGTGTATTGCAATTAAATCAAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KQSPIPCHHHPF*SSSVLQLNQTK Trigger: TTTTGTTTGATTTAATTGCAATACACTTGATGACCAAAAGGGGTGGTGGTGGCAGGGAATAGGACTTTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
||
| 3UTR GCA 72 bp | CCCTGTTCTGCTGCAACATTTAAATTCAGCAATTTTTaGACTGGAATTCCCAGGAAGAATCCAAGACTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PCSAATFKFSNF*TGIPRKNPRLF Trigger: AAAAAGTCTTGGATTCTTCCTGGGAATTCCAGTGCAAAAATTGCTGAATTTAAATGTTGCAGCAGAACAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCACAATAAGAGGCTTGTaGATAAACAGAGGTCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: FFWSTDGDSKFYNTPYHTTIRGL*INRGLI Trigger: TATCAGACCTCTGTTTATCAACAAGCCTCTTATTGT...GGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| 3UTR TCA 72 bp | GATTCTCTTCACACACACACACAGGATTCATTAGAATaGTTTACACGCTGTATTCCAGATAATCCAATAATG | + |
|
Preference number: 3 (lower is better) Translates to: DSLHTHTQDSLE*FTRCIPDNPIM Trigger: CATTATTGGATTATCTGGAATACAGCGTGTAAATCATTCTAATGAATCCTGTGTGTGTGTGTGAAGAGAATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CCA 72 bp | CAGCAAGCATTTAAAAGTCATTCCCACTGTTTCTTTTaGTCAACAGATGGTGATTCCAAATTCTATAACACA | + |
|
Preference number: 3 (lower is better) Translates to: QQAFKSHSHCFF*STDGDSKFYNT Trigger: TGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAAGAAACAGTGGGAATGACTTTTAAATGCTTGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTAGGGCTGTGATGGCCTaGATCTCAATGGTGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTRAVMA*ISMVFR Trigger: TCGGAACACCATTGAGATGCAGGCCATCACAGCCCT...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CAA 72 bp | ACCAAACATCCGAGGGAAGAACTACAAGGGAAGGATTaGCTTGGCTTTCTGTGCTTGCCCCTTCTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKHPREELQGKD*LGFLCLPLLGC Trigger: ACAGCCAAGAAGGGGCAAGCACAGAAAGCCAAGCAAATCCTTCCCTTGTAGTTCTTCCCTCGGATGTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | TGGATCAATAAAAATCCTCATGTGGTTTGCAGCGATGGCAATCTCTGTGGTCTTGCCGCGCGCTTCAGCTaGTTGCATCGGTACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WINKNPHVVCSDGNLCGLAARFS*LHRYRE Trigger: TTCTCTGTACCGATGCAAGCAGCTGAAGCGCGCGGC...AAGACCACAGAGATTGCCATCGCTGCAAACCACATGAGGATTTTTATTGATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR CCA 90 bp | ACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAAAATAACCAAACTGCAGCTCGGAGGTaGGCCAGGGCTGTGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TDGDSKFYNTPYHTQNNQTAARR*ARAVMA Trigger: GGCCATCACAGCCCTGGCCCACCTCCGAGCTGCAGT...TTGGTTATTTTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR TCA 90 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATACCTTTCACTCCTTCTGGGATaGAAGGGGGTCTCTCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AVWGDHEIGYFLLVRKYLSLLLG*KGVSPY Trigger: ATAAGGAGAGACCCCCTTTCATCCCAGAAGGAGTGA...AAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR TCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTGTTTTCTTTTCCTCGTaGCACTCCGAGACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTVFFSS*HSETFL Trigger: CAAGAAGGTCTCGGAGTGTCACGAGGAAAAGAAAAC...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | TATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTTCTTCACGCGCTTCAGCTGCTTaGATCGGTACAGAGAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: YQLPLSSPSDSSSSELSSRASAA*IGTENH Trigger: GTGATTCTCTGTACCGATGCAAGCAGCTGAAGCGCG...TGAAGAAAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| CDS-3UTR GCA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCACTCCGAGACCTTCTTaGCTGGACTGCATAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HMTVLSSFIHQNANSGSSTPRPS*LDCIVG Trigger: GCCCACTATGCAGTCCAGGCAAGAAGGTCTCGGAGT...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | CCACTACAAAACAGTTTTCCTCCACCCACGCAGCCTCCGTACACCAATAAGTCTTTCCCAGACAGCAAGTaGTTGGGCTTCATATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLQNSFPPPTQPPYTNKSFPDSK*LGFISN Trigger: GTTTGATATGAAGCCCAAGCACTTGCTGTCTGGGAA...AGACTTATTGGTGTACGGAGGCTGCGTGGGTGGAGGAAAACTGTTTTGTAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCCGCGCTTCAGCTGCTTaGATCGGTACAGAGAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: HMTVLSSFIHQNANSGSSRASAA*IGTENH Trigger: GTGATTCTCTGTACCGATGCAAGCAGCTGAAGCGCG...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAAGCCGCGCGCTTCAGCTaGTTGCATCGGTACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FWSTDGDSKFYNTPYHTQAARFS*LHRYRE Trigger: TTCTCTGTACCGATGCAAGCAGCTGAAGCGCGCGGC...TTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | CCACTACAAAACAGTTTTCCTCCACCCACGCAGCCTCCGTACACCAATAAGTCTTTGAACGTCCACATCTaGTCTTGTCACCTTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLQNSFPPPTQPPYTNKSLNVHI*SCHLVD Trigger: ATCAACAAGGTGACAAGAGCAGATGTGGACGTTCAA...AGACTTATTGGTGTACGGAGGCTGCGTGGGTGGAGGAAAACTGTTTTGTAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
||
| CDS-3UTR CCA 90 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATACCTTCAGTTCGGGGCATCCTaGGTCCCTGTTTATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVWGDHEIGYFLLVRKYLQFGAS*VPVYSF Trigger: AAAAGAATAAACAGGGACCCAGGATGCCCCGAACTG...AAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAGGGAAATACAAACTCTAGCTAAGCCTTGTTTTCCTCCTCTCATTAATTGCGACTCCGCGCTGTaGAAGAGGGTGGAACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPREIQTLAKPCFPPLINCDSAL*KRVEQI Trigger: AATCTGTTCCACCCTCTTCCACAGCGCGGAGTCGCA...ATTAATGAGAGGAGGAAAACAAGGCTTAGCTAGAGTTTGTATTTCCCTTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CAA 72 bp | GGGATGAAAGGGGGTCTCTCCTTATCATCTCTCTTGTaGGGCACAGCTAAATGCAATCTGTTCAGAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GMKGGLSLSSLL*GTAKCNLFRTS Trigger: TGAGGTTCTGAACAGATTGCATTTAGCTGTGCCCAACAAGAGAGATGATAAGGAGAGACCCCCTTTCATCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| 3UTR CAA 72 bp | TCTGGGATGAAAGGGGGTCTCTCCTTATCATCTCTCTaGTTGGGCACAGCTAAATGCAATCTGTTCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SGMKGGLSLSSL*LGTAKCNLFRT Trigger: GGTTCTGAACAGATTGCATTTAGCTGTGCCCAACAAGAGAGATGATAAGGAGAGACCCCCTTTCATCCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| CDS-3UTR TCA 90 bp | CATGCCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTAAGCGGGATAAATGTTaGCGTACTTGTTCCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: HAYQLPLSSPSDSSSSELKRDKC*RTCSRY Trigger: GTATCTGGAACAAGTACGTCAACATTTATCCCGCTT...AAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| CDS-3UTR TCA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTATCCGACAGAATCTGTaGCAGTCTGTCATGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTIRQNL*QSVMVI Trigger: AATTACCATGACAGACTGTCACAGATTCTGTCGGAT...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGCTTGGGCTTCATATCAAACACATGCCTATCAGCTTCCCCTTTCTTCCCCAGATTTGGTGGTAAATaGATAGGGTTGAACGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KCLGFISNTCLSASPFFPRFGGK*IGLNVH Trigger: GTGGACGTTCAACCCTATGCATTTACCACCAAATCT...GGGGAAGAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAAGCCCAAGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| CDS-3UTR GCA 90 bp | CCACTACAAAACAGTTTTCCTCCACCCACGCAGCCTCCGTACACCAATAAGTCTTTCATATCAAACACATaGCTATCAGCTTCCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQNSFPPPTQPPYTNKSFISNT*LSASPF Trigger: GAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAA...AGACTTATTGGTGTACGGAGGCTGCGTGGGTGGAGGAAAACTGTTTTGTAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CAA 72 bp | AATCTTTGTTTCCCCCTAAATAGCTTCCGTGCAGTGTaGAGGTCACTTACCTCGCATCCTCCATCCTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: NLCFPLNSFRAV*RSLTSHPPSLC Trigger: ACATAAGGATGGAGGATGCGAGGTAAGTGACCTCAACACTGCACGGAAGCTATTTAGGGGGAAACAAAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| 3UTR CAA 72 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTaGGTGAGAAAATACCTTATGCTAAACCCAGATACC | + |
|
Preference number: 4 (lower is better) Translates to: AVWGDHEIGYFL*VRKYLMLNPDT Trigger: GGTATCTGGGTTTAGCATAAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTTTCTTACTTTCTTCACCATCTTaGCATCCCGAAGACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCKEDSLLPRPPSRYTFLLSSPS*HPEDQK Trigger: TTTCTGGTCTTCGGGATGTCAAGATGGTGAAGAAAG...TAAGAAAGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | TGGATCAATAAAAATCCTCATGTGGTTTGCAGCGATGGCAATCTCTGTGGTCTTAACCCATGTCCACACTaGTCAGACAGATCCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: WINKNPHVVCSDGNLCGLNPCPH*SDRSIT Trigger: TGTGATGGATCTGTCTGAGCAGTGTGGACATGGGTT...AAGACCACAGAGATTGCCATCGCTGCAAACCACATGAGGATTTTTATTGATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR TCA 90 bp | TTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAATTCGTTTCTACTCGGTaGGCCAAAAGCCTGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FWSTDGDSKFYNTPYHTQFVSTR*AKSLSH Trigger: GTGTGACAGGCTTTTGGCTCACCGAGTAGAAACGAA...TTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTTTCTTATTGAACGTCCACATCTaGTCTTGTCACCTTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KCKEDSLLPRPPSRYTFLLNVHI*SCHLVD Trigger: ATCAACAAGGTGACAAGAGCAGATGTGGACGTTCAA...TAAGAAAGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCCAGGATGTCTTTTATGCCATCACCCCTGTTCTGCTGCAACATTTAAATGCTCCCTCTTCTTCTTaGGCTCTTCAATCTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KLQDVFYAITPVLLQHLNAPSSS*ALQSPF Trigger: GAATGGAGATTGAAGAGCCCAAGAAGAAGAGGGAGC...ATTTAAATGTTGCAGCAGAACAGGGGTGATGGCATAAAAGACATCCTGGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | TATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTTCTTCAAGATACTCCAAGCTCTaGCTCTGTCTCTTGATAATA | + |
|
Preference number: 4 (lower is better) Translates to: YQLPLSSPSDSSSSELSSRYSKL*LCLLII Trigger: TATTATCAAGAGACAGAGGCAGAGCTTGGAGTATCT...TGAAGAAAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
||
| CDS-3UTR CCA 90 bp | AAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTTTCTTATATCATCTCTCTTGTTaGGCACAGCTAAATGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: KCKEDSLLPRPPSRYTFLYHLSC*AQLNAI Trigger: GATTGCATTTAGCTGTGCCCAACAAGAGAGATGATA...TAAGAAAGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR CCA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCCAGACAGCAAGTGCTTaGGCTTCATATCAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: HMTVLSSFIHQNANSGSSQTASA*ASYQTH Trigger: ATGTGTTTGATATGAAGCCCAAGCACTTGCTGTCTG...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | AAACTCCAGGATGTCTTTTATGCCATCACCCCTGTTCTGCTGCAACATTTAAATAGATTTGGTGGTAAATaGATAGGGTTGAACGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLQDVFYAITPVLLQHLNRFGGK*IGLNVH Trigger: GTGGACGTTCAACCCTATGCATTTACCACCAAATCT...ATTTAAATGTTGCAGCAGAACAGGGGTGATGGCATAAAAGACATCCTGGAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
||
| CDS-3UTR GCA 90 bp | AAACTCCAGGATGTCTTTTATGCCATCACCCCTGTTCTGCTGCAACATTTAAATTGGAAGAGTTCTAACTaGTCCTTTAACCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLQDVFYAITPVLLQHLNWKSSN*SFNPCP Trigger: TGGACATGGGTTAAAGGAGCAGTTAGAACTCTTCCA...ATTTAAATGTTGCAGCAGAACAGGGGTGATGGCATAAAAGACATCCTGGAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCCTTCTTGCCTGGACTaGATAGTGGGCATTGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: FFWSTDGDSKFYNTPYHTPSCLD*IVGIVF Trigger: AAAAACAATGCCCACTATGCAGTCCAGGCAAGAAGG...GGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR CCA 90 bp | TTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAAATGATCCAAAATCCCTaGGGTATCTACAACCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: FWSTDGDSKFYNTPYHTQMIQNP*GIYNLP Trigger: TGGCAGGTTGTAGATACCCCAGGGATTTTGGATCAT...TTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCACCAGAAACATCACGTaGAGTTCTAGAACAACTGCG | + |
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Preference number: 4 (lower is better) Translates to: FFWSTDGDSKFYNTPYHTTRNIT*SSRTTA Trigger: CGCAGTTGTTCTAGAACTCCACGTGATGTTTCTGGT...GGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR TCA 90 bp | TTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAAAAGCGGGATAAATGTTaGCGTACTTGTTCCAGATAC | + |
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Preference number: 4 (lower is better) Translates to: FWSTDGDSKFYNTPYHTQKRDKC*RTCSRY Trigger: GTATCTGGAACAAGTACGTCAACATTTATCCCGCTT...TTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| CDS-3UTR GCA 90 bp | CAAAGCAGCAAGCATTTAAAAGTCATTCCCACTGTTTCTTTTGGTCAACAGATGTTGGGCACAGCTAAATaGAATCTGTTCAGAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: QSSKHLKVIPTVSFGQQMLGTAK*NLFRTS Trigger: TGAGGTTCTGAACAGATTGCATTTAGCTGTGCCCAA...CATCTGTTGACCAAAAGAAACAGTGGGAATGACTTTTAAATGCTTGCTGCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CAA 72 bp | AAAGCAAAGTCCTATTCCCTGCCACCACCACCCCTTTaGGTCATCAAGTGTATTGCAATTAAATCAAACAAA | + |
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Preference number: 4 (lower is better) Translates to: KAKSYSLPPPPL*VIKCIAIKSNK Trigger: TTTGTTTGATTTAATTGCAATACACTTGATGACCAAAAGGGGTGGTGGTGGCAGGGAATAGGACTTTGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| CDS-3UTR CCA 90 bp | CAAAGCAGCAAGCATTTAAAAGTCATTCCCACTGTTTCTTTTGGTCAACAGATGTTGTATTTGGATCAATaGTTGGCAAGCGGGATAAAT | + |
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Preference number: 4 (lower is better) Translates to: QSSKHLKVIPTVSFGQQMLYLDQ*LASGIN Trigger: ATTTATCCCGCTTGCCAACCATTGATCCAAATACAA...CATCTGTTGACCAAAAGAAACAGTGGGAATGACTTTTAAATGCTTGCTGCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| CDS-3UTR CCA 90 bp | TTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAATTGTATTTGGATCAATaGTTGGCAAGCGGGATAAAT | + |
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Preference number: 4 (lower is better) Translates to: FWSTDGDSKFYNTPYHTQLYLDQ*LASGIN Trigger: ATTTATCCCGCTTGCCAACCATTGATCCAAATACAA...TTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| 3UTR CAA 72 bp | ATTCAAGACTTTTGCCGATACTTGAGCTGGTCACTGTaGAATTTACAAACCATGTATTACTCACACTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: IQDFCRYLSWSL*NLQTMYYSHLQ Trigger: TTGCAAGTGTGAGTAATACATGGTTTGTAAATTCAACAGTGACCAGCTCAAGTATCGGCAAAAGTCTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CAA 72 bp | GATGCTTTCGTATGGCTATCTGAGCACTTGACTATCTaGTTTGGAAAAATAGATATTCAAGACTTTTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: DAFVWLSEHLTI*FGKIDIQDFCR Trigger: TCGGCAAAAGTCTTGAATATCTATTTTTCCAAACAAGATAGTCAAGTGCTCAGATAGCCATACGAAAGCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CAA 72 bp | ATGGCAATCTCTGTGGTCTTTGTGAGTGAGGGTCTTTaGACGAACTCCAACAATTTTCATAAAGGAAATAAT | + |
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Preference number: 4 (lower is better) Translates to: MAISVVFVSEGL*TNSNNFHKGNN Trigger: ATTATTTCCTTTATGAAAATTGTTGGAGTTCGTCAAAAGACCCTCACTCACAAAGACCACAGAGATTGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| 3UTR CAA 72 bp | GACTATCTTGTTTGGAAAAATAGATATTCAAGACTTTaGCCGATACTTGAGCTGGTCACTGTTGAATTTACA | + |
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Preference number: 4 (lower is better) Translates to: DYLVWKNRYSRL*PILELVTVEFT Trigger: TGTAAATTCAACAGTGACCAGCTCAAGTATCGGCAAAAGTCTTGAATATCTATTTTTCCAAACAAGATAGTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | AGGTACCCACTCACTCCAGCATGGGGCTCAGTGTACCTCTCCATGTGCTCAGGGTTCTTCATCATAGTCTaGGCTTTCTTCACCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: RYPLTPAWGSVYLSMCSGFFIIV*AFFTIL Trigger: CAAGATGGTGAAGAAAGCCAAGACTATGATGAAGAA...CCCTGAGCACATGGAGAGGTACACTGAGCCCCATGCTGGAGTGAGTGGGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS GCA 90 bp | CTCTTGATAATAGTACACATTCGTCCAAGGGCCGCGCGCTTCAGCTaGTTGCATCGGTACAGAGAATCACCATATTTCATAAGACGCACA | + |
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Preference number: 5 (lower is better) Translates to: LLIIVHIRPRAARFS*LHRYRESPYFIRRT Trigger: TGTGCGTCTTATGAAATATGGTGATTCTCTGTACCGATGCAAGCAGCTGAAGCGCGCGGCCCTTGGACGAATGTGTACTATTATCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | GCCTATCAGCTTCCCCTTTCTTCCCCAAGCGATTCATCTTCTTCTGAGCTTTCTGGTAAATGCATAGGGTaGAACGTCCACATCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: AYQLPLSSPSDSSSSELSGKCIG*NVHICS Trigger: AGAGCAGATGTGGACGTTCAACCCTATGCATTTACC...AGAAAGCTCAGAAGAAGATGAATCGCTTGGGGAAGAAAGGGGAAGCTGATAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| CDS-3UTR CAA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTGGTAAATGCATAGGGTaGAACGTCCACATCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTGKCIG*NVHICS Trigger: AGAGCAGATGTGGACGTTCAACCCTATGCATTTACC...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | AACCCTAAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTTCCTTATCATCTCTCTaGTTGGGCACAGCTAAATGC | + |
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Preference number: 5 (lower is better) Translates to: NPKCKEDSLLPRPPSRYTSLSSL*LGTAKC Trigger: GCATTTAGCTGTGCCCAACAAGAGAGATGATAAGGA...AGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTTAGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | AAGTGCTTGGGCTTCATATCAAACACATGCCTATCAGCTTCCCCTTTCTTCCCCCTCTGCCTCTGTCTCTaGATAATAGTACACATTCGT | + |
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Preference number: 5 (lower is better) Translates to: KCLGFISNTCLSASPFFPLCLCL*IIVHIR Trigger: ACGAATGTGTACTATTATCAAGAGACAGAGGCAGAG...GGGGAAGAAAGGGGAAGCTGATAGGCATGTGTTTGATATGAAGCCCAAGCACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| CDS-3UTR CAA 90 bp | GCGGTCTGGGGAGATCATGAGATTGGCTACTTTCTGTTGGTGAGAAAATACCTTTCTGCTCTTGTCACCTaGTTGATGAAGCTGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: AVWGDHEIGYFLLVRKYLSALVT*LMKLDF Trigger: GAAATCCAGCTTCATCAACAAGGTGACAAGAGCAGA...AAGGTATTTTCTCACCAACAGAAAGTAGCCAATCTCATGATCTCCCCAGACCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | CCACTACAAAACAGTTTTCCTCCACCCACGCAGCCTCCGTACACCAATAAGTCTTTATCATCTCTCTTGTaGGGCACAGCTAAATGCAAT | + |
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Preference number: 5 (lower is better) Translates to: PLQNSFPPPTQPPYTNKSLSSLL*GTAKCN Trigger: ATTGCATTTAGCTGTGCCCAACAAGAGAGATGATAA...AGACTTATTGGTGTACGGAGGCTGCGTGGGTGGAGGAAAACTGTTTTGTAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | AAATGTAAGGAGGATAGCCTTCTGCCTAGACCTCCCAGCAGGTATACTTTCTTACCAGACAGCAAGTGCTaGGGCTTCATATCAAACACA | + |
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Preference number: 5 (lower is better) Translates to: KCKEDSLLPRPPSRYTFLPDSKC*GFISNT Trigger: TGTGTTTGATATGAAGCCCAAGCACTTGCTGTCTGG...TAAGAAAGTATACCTGCTGGGAGGTCTAGGCAGAAGGCTATCCTCCTTACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | ACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAAAATAACCAAAACGGATGGATATCCTaGGCAGACGGCACCACCGTA | + |
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Preference number: 5 (lower is better) Translates to: TDGDSKFYNTPYHTQNNQNGWIS*ADGTTV Trigger: TACGGTGGTGCCGTCTGCCAAGGATATCCATCCGTT...TTGGTTATTTTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021574.8 |
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| CDS-3UTR CAA 90 bp | CATATGACAGTGCTGTCTAGTTTCATCCACCAAAATGCTAACTCAGGAAGTAGCGCTTTCTTCACCATCTaGACATCCCGAAGACCAGAA | + |
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Preference number: 5 (lower is better) Translates to: HMTVLSSFIHQNANSGSSAFFTI*TSRRPE Trigger: TTCTGGTCTTCGGGATGTCAAGATGGTGAAGAAAGC...GCTACTTCCTGAGTTAGCATTTTGGTGGATGAAACTAGACAGCACTGTCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | CTGACTCCTATGCAGATATCTTCATTCACATGCGCATACCCTACAATAGACACGACAACAATAAGAGGCTaGTTGATAAACAGAGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: LTPMQISSFTCAYPTIDTTTIRG*LINRGL Trigger: CAGACCTCTGTTTATCAACAAGCCTCTTATTGTTGT...CGTGTCTATTGTAGGGTATGCGCATGTGAATGAAGATATCTGCATAGGAGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCTCTGCTCTTGTCACCTaGTTGATGAAGCTGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: FFWSTDGDSKFYNTPYHTSALVT*LMKLDF Trigger: GAAATCCAGCTTCATCAACAAGGTGACAAGAGCAGA...GGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | TTTTGGTCAACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAACTCTGCCTCTGTCTCTaGATAATAGTACACATTCGT | + |
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Preference number: 5 (lower is better) Translates to: FWSTDGDSKFYNTPYHTQLCLCL*IIVHIR Trigger: ACGAATGTGTACTATTATCAAGAGACAGAGGCAGAG...TTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGTTGACCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| CDS-3UTR CAA 90 bp | ACAGATGGTGATTCCAAATTCTATAACACACCATACCACACCCAAAATAACCAAACAATAAGAGGCTTGTaGATAAACAGAGGTCTGATA | + |
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Preference number: 5 (lower is better) Translates to: TDGDSKFYNTPYHTQNNQTIRGL*INRGLI Trigger: TATCAGACCTCTGTTTATCAACAAGCCTCTTATTGT...TTGGTTATTTTGGGTGTGGTATGGTGTGTTATAGAATTTGGAATCACCATCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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| CDS GCA 72 bp | ATAGTACACATTCGTCCAAGGGCCGCGCGCTTCAGCTaGTTGCATCGGTACAGAGAATCACCATATTTCATA | + |
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Preference number: 6 (lower is better) Translates to: IVHIRPRAARFS*LHRYRESPYFI Trigger: TATGAAATATGGTGATTCTCTGTACCGATGCAAGCAGCTGAAGCGCGCGGCCCTTGGACGAATGTGTACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021574.8 ENSMUST00000222098.2 |
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| CDS CCA 72 bp | GGTGTTCCGATCCTCCAAAGGATGATCCAAAATCCCTaGGGTATCTACAACCTGCCAGCGCAGATACTTATA | + |
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Preference number: 6 (lower is better) Translates to: GVPILQRMIQNP*GIYNLPAQILI Trigger: TATAAGTATCTGCGCTGGCAGGTTGTAGATACCCCAGGGATTTTGGATCATCCTTTGGAGGATCGGAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222098.2 |
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