Pregenerated sensors for GTPBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023952Ensembl transcript IDs: ENSMUST00000024748.14, ENSMUST00000166252.8, ENSMUST00000166563.2, ENSMUST00000166701.2, ENSMUST00000169383.8, ENSMUST00000172170.8
Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATCCTCAGAGGTGACCAGCATGGGGACCTTGTGGCAGCCAGGCTaGTTGAGGACCCGCTCCAGCTGGCGAACTGTCCTCTCCACTGTG | + |
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Preference number: 1 (lower is better) Translates to: SSSEVTSMGTLWQPG*LRTRSSWRTVLSTV Trigger: CACAGTGGAGAGGACAGTTCGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACCTCTGAGGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CCA 90 bp | GCAGTGACAGCATCATCCTCAGAGGTGACCAGCATGGGGACCTTGTaGCAGCCAGGCTGCTTGAGGACCCGCTCCAGCTGGCGAACTGTC | + |
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Preference number: 1 (lower is better) Translates to: AVTASSSEVTSMGTL*QPGCLRTRSSWRTV Trigger: GACAGTTCGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACCTCTGAGGATGATGCTGTCACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CCA 90 bp | AAAAGGTTGAGCCGGGCCCGGCCCCGCCCGTTGTCCAGCTCTCCTTaGGTCAGGACTCCAAGCAAGGTTGACTTCCCTGAGTCCACATTC | + |
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Preference number: 1 (lower is better) Translates to: KRLSRARPRPLSSSP*VRTPSKVDFPESTF Trigger: GAATGTGGACTCAGGGAAGTCAACCTTGCTTGGAGTCCTGACCCAAGGAGAGCTGGACAACGGGCGGGGCCGGGCCCGGCTCAACCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CCA 90 bp | CTCAGCTCCAAGAAACAGCCATCATCTGTCGGGCCTACCACCAGCTaGTCCCCCTCGCGGCAGATCCCACTGGATAGTGTTCCTCCAACC | + |
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Preference number: 1 (lower is better) Translates to: LSSKKQPSSVGPTTS*SPSRQIPLDSVPPT Trigger: GGTTGGAGGAACACTATCCAGTGGGATCTGCCGCGAGGGGGACCAGCTGGTGGTAGGCCCGACAGATGATGGCTGTTTCTTGGAGCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR TCA 90 bp | TTAAAGCCCAGGATCTCAAAGCTGATGCTGGAGGTTCGGCCAGACTaGATCTCATGCAGGTGGCGGAAAAGGTTGAGCCGGGCCCGGCCC | + |
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Preference number: 1 (lower is better) Translates to: LKPRISKLMLEVRPD*ISCRWRKRLSRARP Trigger: GGGCCGGGCCCGGCTCAACCTTTTCCGCCACCTGCATGAGATTCAGTCTGGCCGAACCTCCAGCATCAGCTTTGAGATCCTGGGCTTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR TCA 90 bp | CGAAGCAATGCACGGTCAAAGTCTCCAAGGGCGAGTGTAGCAGCCTaGCCTGCTCGAAGAACACGACACGCAGAGCGGTTGCGCTGGATG | + |
|
Preference number: 1 (lower is better) Translates to: RSNARSKSPRASVAA*PARRTRHAERLRWM Trigger: CATCCAGCGCAACCGCTCTGCGTGTCGTGTTCTTCGAGCAGGTCAGGCTGCTACACTCGCCCTTGGAGACTTTGACCGTGCATTGCTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR GCA 90 bp | CCTGACCTGCTCGAAGAACACGACACGCAGAGCGGTTGCGCTGGATaGTGCATACCCTCAGCTCCAAGAAACAGCCATCATCTGTCGGGC | + |
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Preference number: 1 (lower is better) Translates to: PDLLEEHDTQSGCAG*CIPSAPRNSHHLSG Trigger: GCCCGACAGATGATGGCTGTTTCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTCGTGTTCTTCGAGCAGGTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR GCA 90 bp | CAATGCACGGTCAAAGTCTCCAAGGGCGAGTGTAGCAGCCTGACCTaGTCGAAGAACACGACACGCAGAGCGGTTGCGCTGGATGCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: QCTVKVSKGECSSLT*SKNTTRRAVALDAA Trigger: TGCAGCATCCAGCGCAACCGCTCTGCGTGTCGTGTTCTTCGAGCAGGTCAGGCTGCTACACTCGCCCTTGGAGACTTTGACCGTGCATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR GCA 90 bp | GACCTGCTCGAAGAACACGACACGCAGAGCGGTTGCGCTGGATGCTaGATACCCTCAGCTCCAAGAAACAGCCATCATCTGTCGGGCCTA | + |
|
Preference number: 1 (lower is better) Translates to: DLLEEHDTQSGCAGC*IPSAPRNSHHLSGL Trigger: TAGGCCCGACAGATGATGGCTGTTTCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTCGTGTTCTTCGAGCAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CCA 90 bp | CACACCCTCCCGGAACAGCAGTTTGGCGCCCACCTTCAGGTATTCTaGGTGTTTCAGGAAACGGAAACGCACCACTGCCTTCTCCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: HTLPEQQFGAHLQVF*VFQETETHHCLLPC Trigger: ACAGGGGAGAAGGCAGTGGTGCGTTTCCGTTTCCTGAAACACCCAGAATACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR TCA 90 bp | GTCCGCAGCTTGTCCTTTGCGTGGATCTTTTCCACCACTGCTGTTTaGCGTACGTTGCCCACATGTACTGTCACCTGGAATCCCCGCCGA | + |
|
Preference number: 1 (lower is better) Translates to: VRSLSFAWIFSTTAV*RTLPTCTVTWNPRR Trigger: TCGGCGGGGATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
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| 3UTR GCA 90 bp | AAAAGCATGGAAGCCAACATAACTGTGGAAGGAGAGAAACTGACATaGAGCTGGCCTTTGGTGTGCCAAGCCCGAGCCTGGCAGCCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: KSMEANITVEGEKLT*SWPLVCQARAWQPH Trigger: GTGGGGCTGCCAGGCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCACAGTTATGTTGGCTTCCATGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
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| 3UTR GCA 90 bp | AGCTGTTTGGATGACTCAGAAGCCCATGGTGGCCTGGGCCTCTCCTaGTGTGATGGCTTGTACATCCGTGACATGACCGATGCCTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: SCLDDSEAHGGLGLS*CDGLYIRDMTDAFG Trigger: ACCAAAGGCATCGGTCATGTCACGGATGTACAAGCCATCACAGCAGGAGAGGCCCAGGCCACCATGGGCTTCTGAGTCATCCAAACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR TCA 90 bp | CCTATGACAGGAGGGTCCGGGGAAGCGGCCCTTGAGAAAAGGAAATaGAGCAGGAATATGCATCGGGACTCAACCCAGGATAGGAGCACA | + |
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Preference number: 1 (lower is better) Translates to: PMTGGSGEAALEKRK*SRNMHRDSTQDRST Trigger: TGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCCTGCTTCATTTCCTTTTCTCAAGGGCCGCTTCCCCGGACCCTCCTGTCATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
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| 3UTR TCA 90 bp | CTAGGAACTGTTGGTTGTCAGGGACCTTTCGTACTAGCACCTCAGTaGTCTTCCGGGGCACGTCACTGTCATAATCCACCTCTCGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LGTVGCQGPFVLAPQ*SSGARHCHNPPLAP Trigger: GGGAGCGAGAGGTGGATTATGACAGTGACGTGCCCCGGAAGATCACTGAGGTGCTAGTACGAAAGGTCCCTGACAACCAACAGTTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR GCA 90 bp | CTCCCCTGTCCGCAGCTTGTCCTTTGCGTGGATCTTTTCCACCACTaGTGTTTGACGTACGTTGCCCACATGTACTGTCACCTGGAATCC | + |
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Preference number: 1 (lower is better) Translates to: LPCPQLVLCVDLFHH*CLTYVAHMYCHLES Trigger: GGATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGGACAGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
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| 3UTR GCA 90 bp | ATTTCATCCACCTGGAACTCTGTCAACTGTTGCATGAGCTCCTCCTaGTCCTTGCTGTTGGTGAGGGGCGGCAGGATATTCAGGAAGACT | + |
|
Preference number: 1 (lower is better) Translates to: ISSTWNSVNCCMSSS*SLLLVRGGRIFRKT Trigger: AGTCTTCCTGAATATCCTGCCGCCCCTCACCAACAGCAAGGAGCAGGAGGAGCTCATGCAACAGTTGACAGAGTTCCAGGTGGATGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR TCA 90 bp | TGGAGCCGCCACTTCATTTGTGTCACCAAGTGCTCAAAGCGGTACTaGGATGGGTTCACCAGCTTCAGTTTATATTCGATGTTTCCATCT | + |
|
Preference number: 1 (lower is better) Translates to: WSRHFICVTKCSKRY*DGFTSFSLYSMFPS Trigger: AGATGGAAACATCGAATATAAACTGAAGCTGGTGAACCCATCTCAGTACCGCTTTGAGCACTTGGTGACACAAATGAAGTGGCGGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTGGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCGGTGGCGGAAAAGGTTaGGCCGGGCCCGGCCCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: EPGSPTPEPAPQIAPSGAGGGKG*AGPGPA Trigger: GGCGGGGCCGGGCCCGGCTCAACCTTTTCCGCCACC...GGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCCAGGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCCTGGCAGCCCCACGCCCAGAGCCGCCAACAGTaGGCAGCATGGCCGGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LTCSWPLVCQARAWQPHAQSRQQ*AAWPEV Trigger: GACTTCCGGCCATGCTGCCCACTGTTGGCGGCTCTG...GGCGTGGGGCTGCCAGGCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTGGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCACCAAGTGGGGCCTATaGCAGGAGGGTCCGGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: EPGSPTPEPAPQIAPSGATKWGL*QEGPGK Trigger: CTTCCCCGGACCCTCCTGTCATAGGCCCCACTTGGT...GGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCCAGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
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| 3UTR CAA 90 bp | TCATGCAGGTGGCGGAAAAGGTTGAGCCGGGCCCGGCCCCGCCCGTaGTCCAGCTCTCCTTGGGTCAGGACTCCAAGCAAGGTTGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: SCRWRKRLSRARPRP*SSSPWVRTPSKVDF Trigger: GAAGTCAACCTTGCTTGGAGTCCTGACCCAAGGAGAGCTGGACAACGGGCGGGGCCGGGCCCGGCTCAACCTTTTCCGCCACCTGCATGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CAA 90 bp | TCCTCAGAGGTGACCAGCATGGGGACCTTGTGGCAGCCAGGCTGCTaGAGGACCCGCTCCAGCTGGCGAACTGTCCTCTCCACTGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: SSEVTSMGTLWQPGC*RTRSSWRTVLSTVV Trigger: GACCACAGTGGAGAGGACAGTTCGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACCTCTGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CAA 90 bp | ACAGTGATGTCTGCCCCAACCTTCTCTGCCATCCGGTGCAGGGTCTaGAGGGAAGCCCGCATCTCCTCTTCAGCCAGCCCCACCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TVMSAPTFSAIRCRV*REARISSSASPTSS Trigger: GCTGCTGGTGGGGCTGGCTGAAGAGGAGATGCGGGCTTCCCTCAAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCAGACATCACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CAA 90 bp | GCAGCAGTGACAGCATCATCCTCAGAGGTGACCAGCATGGGGACCTaGTGGCAGCCAGGCTGCTTGAGGACCCGCTCCAGCTGGCGAACT | + |
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Preference number: 2 (lower is better) Translates to: AAVTASSSEVTSMGT*WQPGCLRTRSSWRT Trigger: AGTTCGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACCTCTGAGGATGATGCTGTCACTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCTGGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCTGGTCTCTGTGCCATTaGTTCAGTCCCTGGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: EPGSPTPEPAPQIAPSGAWSLCH*FSPWVH Trigger: GTGGACCCAGGGACTGAAGCAATGGCACAGAGACCA...GGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCCAGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCTATGACACGGAAACGCACCACTaGCTTCTCCCCTGTCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: GSPTPEPAPQIAPSGAYDTETHH*LLPCPQ Trigger: CTGCGGACAGGGGAGAAGGCAGTGGTGCGTTTCCGT...GTCATAGGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCGGGCCTACCACCAGCTGGTCCCCCTCGCGGCAGATCCCACTGGATAGTTTCTCTGCCATCCGGTaGAGGGTCTTGAGGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SVGPTTSWSPSRQIPLDSFSAIR*RVLREA Trigger: GGCTTCCCTCAAGACCCTGCACCGGATGGCAGAGAA...ACTATCCAGTGGGATCTGCCGCGAGGGGGACCAGCTGGTGGTAGGCCCGACAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CAA 90 bp | CCCGCCCGTTGTCCAGCTCTCCTTGGGTCAGGACTCCAAGCAAGGTaGACTTCCCTGAGTCCACATTCCCTAGGACGGCCACACGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: PARCPALLGSGLQAR*TSLSPHSLGRPHGD Trigger: ATCTCCGTGTGGCCGTCCTAGGGAATGTGGACTCAGGGAAGTCAACCTTGCTTGGAGTCCTGACCCAAGGAGAGCTGGACAACGGGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CAA 90 bp | GACTCAGAAGCCCATGGTGGCCTGGGCCTCTCCTGCTGTGATGGCTaGTACATCCGTGACATGACCGATGCCTTTGGTCACACCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: DSEAHGGLGLSCCDG*YIRDMTDAFGHTLP Trigger: CGGGAGGGTGTGACCAAAGGCATCGGTCATGTCACGGATGTACAAGCCATCACAGCAGGAGAGGCCCAGGCCACCATGGGCTTCTGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCTATGACGCTCCCGAAGAACAGTaGTGTCTGCCCCAACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GSPTPEPAPQIAPSGAYDAPEEQ*CLPQPS Trigger: AGAAGGTTGGGGCAGACATCACTGTTCTTCGGGAGC...GTCATAGGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGCTGCAGGGTTAATGACCCAACCAGGGGAGCACACAGCTGCTGAGCACCCCGCCGAAAGGTGGTaGCGTGGAACAGTAGGACTA | + |
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Preference number: 2 (lower is better) Translates to: QAAAGLMTQPGEHTAAEHPAERW*RGTVGL Trigger: TAGTCCTACTGTTCCACGCCACCACCTTTCGGCGGG...GTGCTCAGCAGCTGTGTGCTCCCCTGGTTGGGTCATTAACCCTGCAGCTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGAGCAGGATTGGGGATGAGGATCCCAGGAGGCACAAACTGGGTCAGGTCACCAAGTGGGGCCTATaGCAGGAGGGTCCGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CKSRIGDEDPRRHKLGQVTKWGL*QEGPGK Trigger: CTTCCCCGGACCCTCCTGTCATAGGCCCCACTTGGT...GACCTGACCCAGTTTGTGCCTCCTGGGATCCTCATCCCCAATCCTGCTCTTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAGAGCAGGATTGGGGATGAGGATCCCAGGAGGCACAAACTGGGTCAGGTCCCTTCTCCCTCAGGACTaGCCCTCCCTGGCCATACCA | + |
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Preference number: 2 (lower is better) Translates to: VRAGLGMRIPGGTNWVRSLLPQD*PSLAIP Trigger: TGGTATGGCCAGGGAGGGGCAGTCCTGAGGGAGAAG...GGACCTGACCCAGTTTGTGCCTCCTGGGATCCTCATCCCCAATCCTGCTCTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTGCTGTTTGACGTACGTTGCCCACATGTACTGTCACCTGGAATCCCCGCCGAGCAGGATTGGGGATaGGGATCCCAGGAGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: PLLFDVRCPHVLSPGIPAEQDWG*GSQEAQ Trigger: TTGTGCCTCCTGGGATCCTCATCCCCAATCCTGCTC...GGCGGGGATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR TCA 90 bp | CCACCAGCTGGTCCCCCTCGCGGCAGATCCCACTGGATAGTGTTCCTCCAACCACTTCCAACAAATCCCTaGGTTCATGGGAACCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PPAGPPRGRSHWIVFLQPLPTNP*VHGNPG Trigger: TCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAG...TGGTTGGAGGAACACTATCCAGTGGGATCTGCCGCGAGGGGGACCAGCTGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTGCCTTCTCCCCTGTCCGCAGCTTGTCCTTTGCGTGGATCTTTTCCACCACCCGCCGAAAGGTGGTaGCGTGGAACAGTAGGACTA | + |
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Preference number: 2 (lower is better) Translates to: PLPSPLSAACPLRGSFPPPAERW*RGTVGL Trigger: TAGTCCTACTGTTCCACGCCACCACCTTTCGGCGGG...TGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGGACAGGGGAGAAGGCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAAGAGCAGGATTGGGGATGAGGATCCCAGGAGGCACAAACTGGGTCAGGTCACCTCTCCAAGAACGTaGCAGGAAGCAAGCGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CKSRIGDEDPRRHKLGQVTSPRT*QEASGS Trigger: GCTGCCGCTTGCTTCCTGCCACGTTCTTGGAGAGGT...GACCTGACCCAGTTTGTGCCTCCTGGGATCCTCATCCCCAATCCTGCTCTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTGCTGTTTGACGTACGTTGCCCACATGTACTGTCACCTGGAATCCCCGCCCATTGCTTCAGTCCCTaGGTCCACCAGGTGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: PLLFDVRCPHVLSPGIPAHCFSP*VHQVGR Trigger: TCTACCCACCTGGTGGACCCAGGGACTGAAGCAATG...GGCGGGGATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGTGTTTCAGGAAACGGAAACGCACCACTGCCTTCTCCCCTGTCCGCAGCACATGTACTGTCACCTaGAATCCCCGCCGAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SGCFRKRKRTTAFSPVRSTCTVT*NPRRKV Trigger: CACCTTTCGGCGGGGATTCCAGGTGACAGTACATGT...GCTGCGGACAGGGGAGAAGGCAGTGGTGCGTTTCCGTTTCCTGAAACACCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCAGCTGGTCCCCCTCGCGGCAGATCCCACTGGATAGTGTTCCTCCAACCAAGCTTGTCCTTTGCGTaGATCTTTTCCACCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: PPAGPPRGRSHWIVFLQPSLSFA*IFSTTA Trigger: AGCAGTGGTGGAAAAGATCCACGCAAAGGACAAGCT...TGGTTGGAGGAACACTATCCAGTGGGATCTGCCGCGAGGGGGACCAGCTGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTGCATGAGCTCCTCCTGCTCCTTGCTGTTGGTGAGGGGCGGCAGGATATTCGTGACATTGGGTGACTaGGCAAACTGCTGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: CCMSSSCSLLLVRGGRIFVTLGD*ANCWAA Trigger: TGCTGCCCAGCAGTTTGCCCAGTCACCCAATGTCAC...GAATATCCTGCCGCCCCTCACCAACAGCAAGGAGCAGGAGGAGCTCATGCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR CAA 90 bp | TGTCCGCAGCTTGTCCTTTGCGTGGATCTTTTCCACCACTGCTGTTaGACGTACGTTGCCCACATGTACTGTCACCTGGAATCCCCGCCG | + |
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Preference number: 2 (lower is better) Translates to: CPQLVLCVDLFHHCC*TYVAHMYCHLESPP Trigger: CGGCGGGGATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
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| 3UTR CAA 90 bp | CTGGTAGACAGCCTCACCACGTCCTTCCTGGAGCCGCCACTTCATTaGTGTCACCAAGTGCTCAAAGCGGTACTGAGATGGGTTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: LVDSLTTSFLEPPLH*CHQVLKAVLRWVHQ Trigger: CTGGTGAACCCATCTCAGTACCGCTTTGAGCACTTGGTGACACAAATGAAGTGGCGGCTCCAGGAAGGACGTGGTGAGGCTGTCTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCCCTTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACATCCACCACTGCTGTTTaGCGTACGTTGCCCACATGT | + |
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Preference number: 2 (lower is better) Translates to: SSPFLLGPSNRGKGVITTSTTAV*RTLPTC Trigger: ACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGA...TGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAAGGGGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGCCTTCTCCCCTGTCCGCAGCTTGTCCTTTGCGTGGATCTTTTCCACCACTCACCACGTCCTTCCTaGAGCCGCCACTTCATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: HCLLPCPQLVLCVDLFHHSPRPS*SRHFIC Trigger: ACAAATGAAGTGGCGGCTCCAGGAAGGACGTGGTGA...GTGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGGACAGGGGAGAAGGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACTGCCTTCTCCCCTGTCCGCAGCTTGTCCTTTGCGTGGATCTTTTCCACCACTCTGCCTCAAACACTaGGCAGATGGTGGGATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: PLPSPLSAACPLRGSFPPLCLKH*ADGGIH Trigger: ATGAATCCCACCATCTGCTCAGTGTTTGAGGCAGAG...TGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGGACAGGGGAGAAGGCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAAACACTGAGCAGATGGTGGGATTCATCTCGGGACTCACCATGACCATGCCCGACACTGGTGAGTCATaGCTGGTCCTGATAGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SNTEQMVGFISGLTMTMPDTGES*LVLIVG Trigger: GCCCACTATCAGGACCAGGCATGACTCACCAGTGTC...GGGCATGGTCATGGTGAGTCCCGAGATGAATCCCACCATCTGCTCAGTGTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGACCTCTCCAAGAACGTaGCAGGAAGCAAGCGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TQPRIGAQSVMVSVPLLQTSPRT*QEASGS Trigger: GCTGCCGCTTGCTTCCTGCCACGTTCTTGGAGAGGT...CTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGGGTGTTTCAGGAAACGGAAACGCACCACTGCCTTCTCCCCTGTCCGCAGCAAACACTGAGCAGATaGTGGGATTCATCTCGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: FWVFQETETHHCLLPCPQQTLSR*WDSSRD Trigger: GTCCCGAGATGAATCCCACCATCTGCTCAGTGTTTG...CTGCGGACAGGGGAGAAGGCAGTGGTGCGTTTCCGTTTCCTGAAACACCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGAAGGAGAGAAACTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCCGAAAGGTGGTGGCGTaGAACAGTAGGACTATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: CGRRETDMQLAFGVPSPSRKVVA*NSRTIS Trigger: AGAGATAGTCCTACTGTTCCACGCCACCACCTTTCG...GCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAGCAGAGCGGTTGCGCTaGATGCTGCATACCCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FPPGSQQQREGGDHYKLLAERLR*MLHTLS Trigger: GCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGC...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR CAA 90 bp | TGCAGGTATTTATGGTGGCCCGCCAGGTCAATGAAGGTGATCATCTaGGAGCTGCTCTCACAGATCTCTTCTGCAGTCCGTGAGTCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: CRYLWWPARSMKVII*ELLSQISSAVRESL Trigger: CAGCGACTCACGGACTGCAGAAGAGATCTGTGAGAGCAGCTCCAAGATGATCACCTTCATTGACCTGGCGGGCCACCATAAATACCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAAACACTGAGCAGATGGTGGGATTCATCTCGGGACTCACCATGACCATGCCCTGGAAGGAGAGAAACTaGCATGCAGCTGGCCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SNTEQMVGFISGLTMTMPWKERN*HAAGLW Trigger: CCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCA...GGGCATGGTCATGGTGAGTCCCGAGATGAATCCCACCATCTGCTCAGTGTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGACGTACGTTGCCCACATGTACTGTCACCTGGAATCCCCGCCGAAAGGTGGTCTCTGCCTCAAACACTaGGCAGATGGTGGGATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LTYVAHMYCHLESPPKGGLCLKH*ADGGIH Trigger: ATGAATCCCACCATCTGCTCAGTGTTTGAGGCAGAG...ACCACCTTTCGGCGGGGATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGGCTTGTACATCCGTGACATGACCGATGCCTTTGGTCACACCCTCCCGGAAAACTCTGTCAACTGTTaGATGAGCTCCTCCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: DGLYIRDMTDAFGHTLPENSVNC*MSSSCS Trigger: GGAGCAGGAGGAGCTCATGCAACAGTTGACAGAGTT...TTCCGGGAGGGTGTGACCAAAGGCATCGGTCATGTCACGGATGTACAAGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAACAGAGCCGCCAACAGTaGGCAGCATGGCCGGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQQSRQQ*AAWPEV Trigger: GACTTCCGGCCATGCTGCCCACTGTTGGCGGCTCTG...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTAAGAGCAGGATTGGGGATGAGGATCCCAGGAGGCACAAACTGGGTCAGGTCGAGCACAGTCTGTCATaGTCTCTGTGCCATTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: CKSRIGDEDPRRHKLGQVEHSLS*SLCHCF Trigger: GAAGCAATGGCACAGAGACCATGACAGACTGTGCTC...GACCTGACCCAGTTTGTGCCTCCTGGGATCCTCATCCCCAATCCTGCTCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR CAA 90 bp | TCCACCTGGAACTCTGTCAACTGTTGCATGAGCTCCTCCTGCTCCTaGCTGTTGGTGAGGGGCGGCAGGATATTCAGGAAGACTTTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: STWNSVNCCMSSSCS*LLVRGGRIFRKTLR Trigger: TCTTAAAGTCTTCCTGAATATCCTGCCGCCCCTCACCAACAGCAAGGAGCAGGAGGAGCTCATGCAACAGTTGACAGAGTTCCAGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTTTGCGTGGATCTTTTCCACCACTGCTGTTTGACGTACGTTGCCCACATGCTCTTCTGCAGTCCGTaGGTCGCTGTAATTCACCAC | + |
|
Preference number: 2 (lower is better) Translates to: VLCVDLFHHCCLTYVAHMLFCSP*VAVIHH Trigger: GTGGTGAATTACAGCGACTCACGGACTGCAGAAGAG...CATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCTCTGGGACTGTGTAGATTTCATCCACCTGGAACTCTGTCAACTGTTGCATTTCCAGTGTTGGCACTaGCGAGGAGCAGGGCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: HLWDCVDFIHLELCQLLHFQCWH*RGAGHS Trigger: ACTGTGCCCTGCTCCTCGTCAGTGCCAACACTGGAA...ATGCAACAGTTGACAGAGTTCCAGGTGGATGAAATCTACACAGTCCCAGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTACTGTCAACTGTTGCATaGGCTCCTCCTGCTCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: FPPGSQQQREGGDHYKLLLSTVA*APPAPC Trigger: GCAAGGAGCAGGAGGAGCTCATGCAACAGTTGACAG...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCGGGACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCAAACACTGAGCAGATaGTGGGATTCATCTCGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: IGTQPRIGAQSVMVSVPLQTLSR*WDSSRD Trigger: GTCCCGAGATGAATCCCACCATCTGCTCAGTGTTTG...CAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGTCCCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAAAGCGGTTGCGCTGGATaGTGCATACCCTCAGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQSGCAG*CIPSAP Trigger: TGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCT...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTTTGCGTGGATCTTTTCCACCACTGCTGTTTGACGTACGTTGCCCACATGACACTGAGCAGATGGTaGGATTCATCTCGGGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: VLCVDLFHHCCLTYVAHMTLSRW*DSSRDS Trigger: TGAGTCCCGAGATGAATCCCACCATCTGCTCAGTGT...CATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAACGGGGAAGCGGCCCTTaGGAAAAGGAAATGAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQRGSGP*EKEMKQ Trigger: CTGCTTCATTTCCTTTTCTCAAGGGCCGCTTCCCCG...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAATGGTCTCTGTGCCATTaGTTCAGTCCCTGGGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQWSLCH*FSPWVH Trigger: GTGGACCCAGGGACTGAAGCAATGGCACAGAGACCA...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAGAGCACAGTCTGTCATaGTCTCTGTGCCATTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: FPPGSQQQREGGDHYKLLEHSLS*SLCHCF Trigger: GAAGCAATGGCACAGAGACCATGACAGACTGTGCTC...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAATGCTCAAAGCGGTACTaGGATGGGTTCACCAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQCSKRY*DGFTSF Trigger: GAAGCTGGTGAACCCATCTCAGTACCGCTTTGAGCA...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAATGCCCCAACCTTCTCTaGCATCCGGTGCAGGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SIMQRIFQQIPEFMGTQECPNLL*HPVQGL Trigger: AAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCA...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAAGGCTACCACACAATCTaGAAAAGCATGGAAGCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: SIMQRIFQQIPEFMGTQEGYHTI*KSMEAN Trigger: GTTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCC...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATATATATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGATGGAAGGAGAGAAACTaGCATGCAGCTGGCCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: TYISIMQRIFQQIPEFMGWKERN*HAAGLW Trigger: CCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCA...TCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATATATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTCGGGCCTACCACCAGCTGGTCCCCCTCGCGGCAGATCCCACTGGATAGTAGCTCCTCCTGCTCCTaGCTGTTGGTGAGGGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVGPTTSWSPSRQIPLDSSSSCS*LLVRGG Trigger: GCCGCCCCTCACCAACAGCAAGGAGCAGGAGGAGCT...ACTATCCAGTGGGATCTGCCGCGAGGGGGACCAGCTGGTGGTAGGCCCGACAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTGCCCGGCCCCGCCCGTaGTCCAGCTCTCCTTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: AQSVMVSVPLLQSLGPPGARPRP*SSSPWV Trigger: GACCCAAGGAGAGCTGGACAACGGGCGGGGCCGGGC...ACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | TTGTGGCAGCCAGGCTGCTTGAGGACCCGCTCCAGCTaGCGAACTGTCCTCTCCACTGTGGTCTTAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: LWQPGCLRTRSS*RTVLSTVVLAH Trigger: GTGTGCTAAGACCACAGTGGAGAGGACAGTTCGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR TCA 72 bp | GCACGGTCAAAGTCTCCAAGGGCGAGTGTAGCAGCCTaGCCTGCTCGAAGAACACGACACGCAGAGCGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ARSKSPRASVAA*PARRTRHAERL Trigger: CAACCGCTCTGCGTGTCGTGTTCTTCGAGCAGGTCAGGCTGCTACACTCGCCCTTGGAGACTTTGACCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | GTGTTCTCCTCCCTCCAGCAGACAAGACCAGGCAGCTaGAGGGTTAATGACCCAACCAGGGGAGCACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: VFSSLQQTRPGS*RVNDPTRGAHS Trigger: GCTGTGTGCTCCCCTGGTTGGGTCATTAACCCTGCAGCTGCCTGGTCTTGTCTGCTGGAGGGAGGAGAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | GTCAAAGTCTCCAAGGGCGAGTGTAGCAGCCTGACCTaGTCGAAGAACACGACACGCAGAGCGGTTGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VKVSKGECSSLT*SKNTTRRAVAL Trigger: CAGCGCAACCGCTCTGCGTGTCGTGTTCTTCGAGCAGGTCAGGCTGCTACACTCGCCCTTGGAGACTTTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGAGCAGGATTGGGGATGAGGATCCCAGGAGGCACAAACTGGGTCAGGTCCCCCACCAGCAGCCCATaGTCCTCTACCCCAATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRAGLGMRIPGGTNWVRSPTSSP*SSTPIW Trigger: CCAGATTGGGGTAGAGGACAATGGGCTGCTGGTGGG...GGACCTGACCCAGTTTGTGCCTCCTGGGATCCTCATCCCCAATCCTGCTCTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CAA 90 bp | CACGCAGAGCGGTTGCGCTGGATGCTGCATACCCTCAGCTCCAAGAAACAGCCAGTTGTCCAGCTCTCCTaGGGTCAGGACTCCAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HAERLRWMLHTLSSKKQPVVQLS*GQDSKQ Trigger: TTGCTTGGAGTCCTGACCCAAGGAGAGCTGGACAAC...TGGCTGTTTCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR TCA 72 bp | GCCTCTCCTGCTGTGATGGCTTGTACATCCGTGACATaGCCGATGCCTTTGGTCACACCCTCCCGGAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: ASPAVMACTSVT*PMPLVTPSRNS Trigger: GCTGTTCCGGGAGGGTGTGACCAAAGGCATCGGTCATGTCACGGATGTACAAGCCATCACAGCAGGAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | ACAGTGATGTCTGCCCCAACCTTCTCTGCCATCCGGTaGAGGGTCTTGAGGGAAGCCCGCATCTCCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TVMSAPTFSAIR*RVLREARISSS Trigger: TGAAGAGGAGATGCGGGCTTCCCTCAAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCAGACATCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | CCTGACCTGCTCGAAGAACACGACACGCAGAGCGGTTaGGCTGGATGCTGCATACCCTCAGCTCCAAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PDLLEEHDTQSG*AGCCIPSAPRN Trigger: GTTTCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTCGTGTTCTTCGAGCAGGTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | CTCGGGACTCACCATGACCATGCCCTTGCGAAGCAATaGACGGTCAAAGTCTCCAAGGGCGAGTGTAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LGTHHDHALAKQ*TVKVSKGECSS Trigger: GCTGCTACACTCGCCCTTGGAGACTTTGACCGTGCATTGCTTCGCAAGGGCATGGTCATGGTGAGTCCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | CCTGGCCATACCAAACTTGACACCTCTCCAAGAACGTaGCAGGAAGCAAGCGGCAGCAGACACTCCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PGHTKLDTSPRT*QEASGSRHSSP Trigger: GGGAGAGGAGTGTCTGCTGCCGCTTGCTTCCTGCCACGTTCTTGGAGAGGTGTCAAGTTTGGTATGGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | AAGAAACAGCCATCATCTGTCGGGCCTACCACCAGCTaGTCCCCCTCGCGGCAGATCCCACTGGATAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KKQPSSVGPTTS*SPSRQIPLDSV Trigger: AACACTATCCAGTGGGATCTGCCGCGAGGGGGACCAGCTGGTGGTAGGCCCGACAGATGATGGCTGTTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | CCTGCTCGAAGAACACGACACGCAGAGCGGTTGCGCTaGATGCTGCATACCCTCAGCTCCAAGAAACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PARRTRHAERLR*MLHTLSSKKQP Trigger: TGGCTGTTTCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTCGTGTTCTTCGAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | GATGACTCAGAAGCCCATGGTGGCCTGGGCCTCTCCTaGTGTGATGGCTTGTACATCCGTGACATGACCGAT | + |
|
Preference number: 3 (lower is better) Translates to: DDSEAHGGLGLS*CDGLYIRDMTD Trigger: ATCGGTCATGTCACGGATGTACAAGCCATCACAGCAGGAGAGGCCCAGGCCACCATGGGCTTCTGAGTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | AACATAACTGTGGAAGGAGAGAAACTGACATGCAGCTaGCCTTTGGTGTGCCAAGCCCGAGCCTGGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NITVEGEKLTCS*PLVCQARAWQP Trigger: GGGCTGCCAGGCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCACAGTTATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR CCA 72 bp | CGATGCCTTTGGTCACACCCTCCCGGAACAGCAGTTTaGCGCCCACCTTCAGGTATTCTGGGTGTTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RCLWSHPPGTAV*RPPSGILGVSG Trigger: TCCTGAAACACCCAGAATACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTGACCAAAGGCATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR TCA 72 bp | CACTGTCATAATCCACCTCTCGCTCCCGAAGAACAGTaGTGTCTGCCCCAACCTTCTCTGCCATCCGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HCHNPPLAPEEQ*CLPQPSLPSGA Trigger: TGCACCGGATGGCAGAGAAGGTTGGGGCAGACATCACTGTTCTTCGGGAGCGAGAGGTGGATTATGACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR TCA 72 bp | AGGATCTCAAAGCTGATGCTGGAGGTTCGGCCAGACTaGATCTCATGCAGGTGGCGGAAAAGGTTGAGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: RISKLMLEVRPD*ISCRWRKRLSR Trigger: CCGGCTCAACCTTTTCCGCCACCTGCATGAGATTCAGTCTGGCCGAACCTCCAGCATCAGCTTTGAGATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | GTATTCTGGGTGTTTCAGGAAACGGAAACGCACCACTaGCTTCTCCCCTGTCCGCAGCTTGTCCTTTGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: VFWVFQETETHH*LLPCPQLVLCV Trigger: CACGCAAAGGACAAGCTGCGGACAGGGGAGAAGGCAGTGGTGCGTTTCCGTTTCCTGAAACACCCAGAATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | ATAATCCACCTCTCGCTCCCGAAGAACAGTGATGTCTaGCCCAACCTTCTCTGCCATCCGGTGCAGGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: IIHLSLPKNSDV*PNLLCHPVQGL Trigger: AAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCAGACATCACTGTTCTTCGGGAGCGAGAGGTGGATTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | GAAGAACACGACACGCAGAGCGGTTGCGCTGGATGCTaGATACCCTCAGCTCCAAGAAACAGCCATCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: EEHDTQSGCAGC*IPSAPRNSHHL Trigger: CAGATGATGGCTGTTTCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTCGTGTTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | CTCGAAGAACACGACACGCAGAGCGGTTGCGCTGGATaGTGCATACCCTCAGCTCCAAGAAACAGCCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: LEEHDTQSGCAG*CIPSAPRNSHH Trigger: ATGATGGCTGTTTCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTCGTGTTCTTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | CCACATGTACTGTCACCTGGAATCCCCGCCGAAAGGTaGTGGCGTGGAACAGTAGGACTATCTCTGCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PHVLSPGIPAER*WRGTVGLSLPQ Trigger: TTGAGGCAGAGATAGTCCTACTGTTCCACGCCACCACCTTTCGGCGGGGATTCCAGGTGACAGTACATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | CCGGAACAGCAGTTTGGCGCCCACCTTCAGGTATTCTaGGTGTTTCAGGAAACGGAAACGCACCACTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PEQQFGAHLQVF*VFQETETHHCL Trigger: AAGGCAGTGGTGCGTTTCCGTTTCCTGAAACACCCAGAATACCTGAAGGTGGGCGCCAAACTGCTGTTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CAA 90 bp | AACATAACTGTGGAAGGAGAGAAACTGACATGCAGCTGGCCTTTGGTGTGCCAAATCCGGTGCAGGGTCTaGAGGGAAGCCCGCATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NITVEGEKLTCSWPLVCQIRCRV*REARIS Trigger: GGAGATGCGGGCTTCCCTCAAGACCCTGCACCGGAT...TTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCACAGTTATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR TCA 72 bp | GTGCTGACAAGGGCCACCTCAGTTGTTGACAATTCCTaGAGTGCAGAGATGACACTGGTGAGTCATGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLTRATSVVDNS*SAEMTLVSHAW Trigger: CCAGGCATGACTCACCAGTGTCATCTCTGCACTTCAGGAATTGTCAACAACTGAGGTGGCCCTTGTCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
||
| 3UTR TCA 72 bp | CTTGGAGCTGCTCTCACAGATCTCTTCTGCAGTCCGTaGGTCGCTGTAATTCACCACCTCTCCCTTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGAALTDLFCSP*VAVIHHLSLAV Trigger: AACAGCAAGGGAGAGGTGGTGAATTACAGCGACTCACGGACTGCAGAAGAGATCTGTGAGAGCAGCTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | CCGCAGCTTGTCCTTTGCGTGGATCTTTTCCACCACTaGTGTTTGACGTACGTTGCCCACATGTACTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PQLVLCVDLFHH*CLTYVAHMYCH Trigger: GTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | GTGAGGCCAAAGATGGTGGTGTGCAGGTATTTATGGTaGCCCGCCAGGTCAATGAAGGTGATCATCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VRPKMVVCRYLW*PARSMKVIILE Trigger: CTCCAAGATGATCACCTTCATTGACCTGGCGGGCCACCATAAATACCTGCACACCACCATCTTTGGCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | GAGGTGAGGCCAAAGATGGTGGTGTGCAGGTATTTATaGTGGCCCGCCAGGTCAATGAAGGTGATCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EVRPKMVVCRYL*WPARSMKVIIL Trigger: CAAGATGATCACCTTCATTGACCTGGCGGGCCACCATAAATACCTGCACACCACCATCTTTGGCCTCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTACCGGGGAAGCGGCCCTaGAGAAAAGGAAATGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FPPGSQQQREGGDHYKLLPGKRP*RKGNEA Trigger: TGCTTCATTTCCTTTTCTCAAGGGCCGCTTCCCCGG...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAGAGCAGGATTGGGGATGAGGATCCCAGGAGGCACAAACTGGGTCAGGTCTCTAGGAACTGTTGGTaGTCAGGGACCTTTCGTACT | + |
|
Preference number: 3 (lower is better) Translates to: CKSRIGDEDPRRHKLGQVSRNCW*SGTFRT Trigger: AGTACGAAAGGTCCCTGACAACCAACAGTTCCTAGA...GACCTGACCCAGTTTGTGCCTCCTGGGATCCTCATCCCCAATCCTGCTCTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR GCA 72 bp | CAATTCCTGAAGTGCAGAGATGACACTGGTGAGTCATaGCTGGTCCTGATAGTGGGCCAAGATGGCTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QFLKCRDDTGES*LVLIVGQDGCV Trigger: AACACAGCCATCTTGGCCCACTATCAGGACCAGGCATGACTCACCAGTGTCATCTCTGCACTTCAGGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
||
| 3UTR CCA 72 bp | GAGGATCCCAGGAGGCACAAACTGGGTCAGGTCCTATaGCTACCACACAATCTGAAAAAGCATGGAAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: EDPRRHKLGQVL*LPHNLKKHGSQ Trigger: TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTTGTGCCTCCTGGGATCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATGAAGCAGGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTCTGGCCATACCAAACTaGACACCTCTCCAAGAACGT | + |
|
Preference number: 3 (lower is better) Translates to: GNEAGICIGTQPRIGAQSLAIPN*TPLQER Trigger: ACGTTCTTGGAGAGGTGTCAAGTTTGGTATGGCCAG...AGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCCTGCTTCATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAACATTCCACCACTGCTGTTaGACGTACGTTGCCCACATG | + |
|
Preference number: 3 (lower is better) Translates to: TGSGPMATTQSEKAWKPTFHHCC*TYVAHM Trigger: CATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAA...TGTTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| 3UTR TCA 72 bp | TTGTCCTTTGCGTGGATCTTTTCCACCACTGCTGTTTaGCGTACGTTGCCCACATGTACTGTCACCTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSFAWIFSTTAV*RTLPTCTVTWN Trigger: ATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGCCGGGGAAGCGGCCCTaGAGAAAAGGAAATGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YLLCRESSNKSLSSWEPRPGKRP*RKGNEA Trigger: TGCTTCATTTCCTTTTCTCAAGGGCCGCTTCCCCGG...CCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 ENSMUST00000172170.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAACTGGCCATACCAAACTaGACACCTCTCCAAGAACGT | + |
|
Preference number: 3 (lower is better) Translates to: SIMQRIFQQIPEFMGTQELAIPN*TPLQER Trigger: ACGTTCTTGGAGAGGTGTCAAGTTTGGTATGGCCAG...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000169383.8 |
||
| 3UTR TCA 72 bp | CACTTCATTTGTGTCACCAAGTGCTCAAAGCGGTACTaGGATGGGTTCACCAGCTTCAGTTTATATTCGATG | + |
|
Preference number: 3 (lower is better) Translates to: HFICVTKCSKRY*DGFTSFSLYSM Trigger: CATCGAATATAAACTGAAGCTGGTGAACCCATCTCAGTACCGCTTTGAGCACTTGGTGACACAAATGAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| CDS-3UTR GCA 90 bp | CTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCCTGGCAGCCCCACGCCGACACGCAGAGCGGTTaGGCTGGATGCTGCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: LTCSWPLVCQARAWQPHADTQSG*AGCCIP Trigger: GGGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTC...GGCGTGGGGCTGCCAGGCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCGAGGTTCGGCCAGACTaGATCTCATGCAGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EPGSPTPEPAPQIAPSGAEVRPD*ISCRWR Trigger: CCGCCACCTGCATGAGATTCAGTCTGGCCGAACCTC...GGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCCAGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCTATTCCGGTGCAGGGTCTTaGGGGAAGCCCGCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGSPTPEPAPQIAPSGAYSGAGS*GKPASP Trigger: AGGAGATGCGGGCTTCCCTCAAGACCCTGCACCGGA...ATAGGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | ATCGGGACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGGGTGGCGGAAAAGGTTaGGCCGGGCCCGGCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGTQPRIGAQSVMVSVPLGGGKG*AGPGPA Trigger: GGCGGGGCCGGGCCCGGCTCAACCTTTTCCGCCACC...CAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGTCCCGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCTATGAGGTTCGGCCAGACTaGATCTCATGCAGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSPTPEPAPQIAPSGAYEVRPD*ISCRWR Trigger: CCGCCACCTGCATGAGATTCAGTCTGGCCGAACCTC...ATAGGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCTATGACAGGTTGTGGCAGCCAGGCTaGTTGAGGACCCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTPEPAPQIAPSGAYDRLWQPG*LRTRSS Trigger: GCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAA...CCTGTCATAGGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | CTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCCTGGCAGCCCCACGCCTTGTCCAGCTCTCCTTaGGTCAGGACTCCAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTCSWPLVCQARAWQPHALSSSP*VRTPSK Trigger: CTTGCTTGGAGTCCTGACCCAAGGAGAGCTGGACAA...GGCGTGGGGCTGCCAGGCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCTCCACCACTGCTGTTTaGCGTACGTTGCCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: EPGSPTPEPAPQIAPSGASTTAV*RTLPTC Trigger: ACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGA...GGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCCAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | CTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCCTGGCAGCCCCACGCCCGAAAGGTGGTGGCGTaGAACAGTAGGACTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTCSWPLVCQARAWQPHARKVVA*NSRTIS Trigger: AGAGATAGTCCTACTGTTCCACGCCACCACCTTTCG...GGCGTGGGGCTGCCAGGCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCCTTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACATCCGGTGCAGGGTCTTaGGGGAAGCCCGCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPFLLGPSNRGKGVITTSGAGS*GKPASP Trigger: AGGAGATGCGGGCTTCCCTCAAGACCCTGCACCGGA...TGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAAGGGGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCTGAGCACTGCCCTGAACCGTCTTCTCCCTCAGGACTGCCCCTCCCTGCTCTTCTGCAGTCCGTaGGTCGCTGTAATTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSTALNRLLPQDCPSLLFCSP*VAVIHH Trigger: GTGGTGAATTACAGCGACTCACGGACTGCAGAAGAG...CAGGGAGGGGCAGTCCTGAGGGAGAAGACGGTTCAGGGCAGTGCTCAGCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCCTCTGCCTCAAACACTaGGCAGATGGTGGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EPGSPTPEPAPQIAPSGALCLKH*ADGGIH Trigger: ATGAATCCCACCATCTGCTCAGTGTTTGAGGCAGAG...GGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | CACCTCTCCAAGAACGTGGCAGGAAGCAAGCGGCAGCAGACACTCCTCTCCCTAACGGAAACGCACCACTaGCTTCTCCCCTGTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLSKNVAGSKRQQTLLSLTETHH*LLPCPQ Trigger: CTGCGGACAGGGGAGAAGGCAGTGGTGCGTTTCCGT...TAGGGAGAGGAGTGTCTGCTGCCGCTTGCTTCCTGCCACGTTCTTGGAGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR TCA 90 bp | AGCCGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCGGGGCAGTAGGAGGTaGGGCCAAAGATGGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRQQWAAWPEVTSCIVGQRGSRR*GQRWWC Trigger: ACACCACCATCTTTGGCCTCACCTCCTACTGCCCCG...CTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR TCA 90 bp | GGAAATGAAGCAGGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTGGCAGCCAGGCTGCTTaGGGACCCGCTCCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GNEAGICIGTQPRIGAQSGSQAA*GPAPAG Trigger: GCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCC...AGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCCTGCTTCATTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | AGGACATCTTCCCCTTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCGCTCCTTGCTGTTGGTaGGGGGCGGCAGGATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTSSPFLLGPSNRGKGVIAPCCW*GAAGYS Trigger: TGAATATCCTGCCGCCCCTCACCAACAGCAAGGAGC...GATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAAGGGGAAGATGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGAGCAGGATTGGGGATGAGGATCCCAGGAGGCACAAACTGGGTCAGGTCCGACACGCAGAGCGGTTaGGCTGGATGCTGCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: VRAGLGMRIPGGTNWVRSDTQSG*AGCCIP Trigger: GGGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTC...GGACCTGACCCAGTTTGTGCCTCCTGGGATCCTCATCCCCAATCCTGCTCTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTGCAGAGCGGTTGCGCTaGATGCTGCATACCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQSVMVSVPLLQSLGPPGAERLR*MLHTLS Trigger: GCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGC...ACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | CGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGCATTCTCTGCCAGCCTaGACTCCACCTGTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQQWAAWPEVTSCIVGQQHSLPA*TPPVRA Trigger: GGCCCTCACAGGTGGAGTCCAGGCTGGCAGAGAATG...CTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGAAGGAGAGAAACTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCCCAGGATCTCAAAGCTaGTGCTGGAGGTTCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGRRETDMQLAFGVPSPSPGSQS*CWRFGQ Trigger: CTGGCCGAACCTCCAGCATCAGCTTTGAGATCCTGG...GCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCAGACAAGACCAGGCAGCTGCAGGGTTAATGACCCAACCAGGGGAGCACCATCATCCTCAGAGGTaGCCAGCATGGGGACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRQDQAAAGLMTQPGEHHHPQR*PAWGPC Trigger: ACAAGGTCCCCATGCTGGTCACCTCTGAGGATGATG...GTGCTCCCCTGGTTGGGTCATTAACCCTGCAGCTGCCTGGTCTTGTCTGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCCTTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAGCTCCTTGCTGTTGGTaGGGGGCGGCAGGATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPFLLGPSNRGKGVITTAPCCW*GAAGYS Trigger: TGAATATCCTGCCGCCCCTCACCAACAGCAAGGAGC...TGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAAGGGGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCCTTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAGCGAGTGTAGCAGCCTaGCCTGCTCGAAGAACACGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPFLLGPSNRGKGVITTASVAA*PARRTR Trigger: TCGTGTTCTTCGAGCAGGTCAGGCTGCTACACTCGC...TGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAAGGGGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGTTCTCTGCCATCCGGTaGAGGGTCTTGAGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRQQWAAWPEVTSCIVGQFSAIR*RVLREA Trigger: GGCTTCCCTCAAGACCCTGCACCGGATGGCAGAGAA...CTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR GCA 90 bp | GAAGGAGAGAAACTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCCTGGTGCATGAGCTCCTCCTaGTCCTTGCTGTTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGEKLTCSWPLVCQARAWCMSSS*SLLLVR Trigger: CCTCACCAACAGCAAGGAGCAGGAGGAGCTCATGCA...CCAGGCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGAGAGAAACTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCCTGGGGTTGCGCTGGATGCTaGATACCCTCAGCTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGEKLTCSWPLVCQARAWGCAGC*IPSAPR Trigger: TCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACC...CCAGGCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGGACACGCAGAGCGGTTaGGCTGGATGCTGCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: VGSMAGSHLMYCRTAVELDTQSG*AGCCIP Trigger: GGGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTC...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGACGGAAACGCACCACTaGCTTCTCCCCTGTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGSMAGSHLMYCRTAVELTETHH*LLPCPQ Trigger: CTGCGGACAGGGGAGAAGGCAGTGGTGCGTTTCCGT...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | GATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCGCAGAGCGGTTGCGCTaGATGCTGCATACCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DRSTVCHGLCAIASVPGSAERLR*MLHTLS Trigger: GCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGC...GGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCTCCAAGAACGTGGCAGGAAGCAAGCGGCAGCAGACACTCCTCTCCCTACCCGGAACAGCAGTTTaGCGCCCACCTTCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: HLSKNVAGSKRQQTLLSLPGTAV*RPPSGI Trigger: AATACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGG...TAGGGAGAGGAGTGTCTGCTGCCGCTTGCTTCCTGCCACGTTCTTGGAGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CCA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGAAGCCCATGGTGGCCTaGGCCTCTCCTGCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VGSMAGSHLMYCRTAVELKPMVA*ASPAVM Trigger: CATCACAGCAGGAGAGGCCCAGGCCACCATGGGCTT...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | CGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGCCTTCAGGAGAAAAGTaGTCACGGCCCAGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQQWAAWPEVTSCIVGQQPSGEK*SRPRQV Trigger: CACCTGCCTGGGCCGTGACCACTTTTCTCCTGAAGG...CTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| 3UTR CAA 72 bp | CCGATGCCTTTGGTCACACCCTCCCGGAACAGCAGTTaGGCGCCCACCTTCAGGTATTCTGGGTGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMPLVTPSRNSS*APTFRYSGCFR Trigger: CCTGAAACACCCAGAATACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTGACCAAAGGCATCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGAAGGAGAGAAACTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCGCTCCCGAAGAACAGTaGTGTCTGCCCCAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGRRETDMQLAFGVPSPSAPEEQ*CLPQPS Trigger: AGAAGGTTGGGGCAGACATCACTGTTCTTCGGGAGC...GCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | GATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCTTCCAGTGTTGGCACTaGCGAGGAGCAGGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRSTVCHGLCAIASVPGSFQCWH*RGAGHS Trigger: ACTGTGCCCTGCTCCTCGTCAGTGCCAACACTGGAA...GGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | GCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTTGCATGAGCTCCTCCTaGTCCTTGCTGTTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQSVMVSVPLLQSLGPPGCMSSS*SLLLVR Trigger: CCTCACCAACAGCAAGGAGCAGGAGGAGCTCATGCA...ACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGGGTTGCGCTGGATGCTaGATACCCTCAGCTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRQQWAAWPEVTSCIVGQGCAGC*IPSAPR Trigger: TCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACC...CTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR GCA 90 bp | CGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGCATCCCATCATTCTCTaGCAGCCTGGACTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQQWAAWPEVTSCIVGQQHPIIL*QPGLHL Trigger: CAGGTGGAGTCCAGGCTGGCAGAGAATGATGGGATG...CTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCACGGCCCAGGCAGGTaGCTCCCATCCCATCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVGSMAGSHLMYCRTAVEHGPGR*LPSHHS Trigger: AGAATGATGGGATGGGAGGCACCTGCCTGGGCCGTG...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | CGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGCCCGGAACAGCAGTTTaGCGCCCACCTTCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RQQWAAWPEVTSCIVGQQPGTAV*RPPSGI Trigger: AATACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGG...CTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | CCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAAATGGGACCCGGCTaGGTCCCTCTCACCTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PTVGSMAGSHLMYCRTAVEMGPG*VPLTFA Trigger: CGCAAAGGTGAGAGGGACCCAGCCGGGTCCCATTTC...TACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCCAGGATCTCAAAGCTaGTGCTGGAGGTTCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPRIGAQSVMVSVPLLQSPGSQS*CWRFGQ Trigger: CTGGCCGAACCTCCAGCATCAGCTTTGAGATCCTGG...GGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | GATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCCTGTCAACTGTTGCATaGGCTCCTCCTGCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DRSTVCHGLCAIASVPGSLSTVA*APPAPC Trigger: GCAAGGAGCAGGAGGAGCTCATGCAACAGTTGACAG...GGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGGCGAGTGTAGCAGCCTaGCCTGCTCGAAGAACACGA | + |
|
Preference number: 4 (lower is better) Translates to: TVGSMAGSHLMYCRTAVEASVAA*PARRTR Trigger: TCGTGTTCTTCGAGCAGGTCAGGCTGCTACACTCGC...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR TCA 90 bp | CCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGCGAGTGTAGCAGCCTaGCCTGCTCGAAGAACACGA | + |
|
Preference number: 4 (lower is better) Translates to: PTVGSMAGSHLMYCRTAVASVAA*PARRTR Trigger: TCGTGTTCTTCGAGCAGGTCAGGCTGCTACACTCGC...TACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
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| CDS-3UTR TCA 90 bp | CGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTCCACCACTGCTGTTTaGCGTACGTTGCCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: RQQWAAWPEVTSCIVGQQSTTAV*RTLPTC Trigger: ACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGA...CTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTATTGTGGCAGCCAGGCTaGTTGAGGACCCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPPGSQQQREGGDHYKLLLWQPG*LRTRSS Trigger: GCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAA...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR GCA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGAGCGGTTGCGCTGGATaGTGCATACCCTCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVGSMAGSHLMYCRTAVESGCAG*CIPSAP Trigger: TGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCT...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
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| CDS-3UTR GCA 90 bp | ATCGGGACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGAGCGGTTGCGCTGGATaGTGCATACCCTCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IGTQPRIGAQSVMVSVPLSGCAG*CIPSAP Trigger: TGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCT...CAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGTCCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR GCA 90 bp | AGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTGGGTGCCCTTGCGAAGCAATaGACGGTCAAAGTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSWSLCHCFSPWVHQVGALAKQ*TVKVSK Trigger: CTTGGAGACTTTGACCGTGCATTGCTTCGCAAGGGC...ACCCACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CCA 90 bp | GCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTTTGTCCAGCTCTCCTTaGGTCAGGACTCCAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQSVMVSVPLLQSLGPPGLSSSP*VRTPSK Trigger: CTTGCTTGGAGTCCTGACCCAAGGAGAGCTGGACAA...ACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTGCAGAGCGGTTGCGCTaGATGCTGCATACCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSMAGSHLMYCRTAVELFAERLR*MLHTLS Trigger: GCTGAGGGTATGCAGCATCCAGCGCAACCGCTCTGC...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
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| CDS-3UTR CCA 90 bp | CAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCCCGCCGAAAGGTGGTaGCGTGGAACAGTAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: QPRIGAQSVMVSVPLLQSPAERW*RGTVGL Trigger: TAGTCCTACTGTTCCACGCCACCACCTTTCGGCGGG...GGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CCA 90 bp | GTAAGAGCAGGATTGGGGATGAGGATCCCAGGAGGCACAAACTGGGTCAGGTCCACATGTACTGTCACCTaGAATCCCCGCCGAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRAGLGMRIPGGTNWVRSTCTVT*NPRRKV Trigger: CACCTTTCGGCGGGGATTCCAGGTGACAGTACATGT...GGACCTGACCCAGTTTGTGCCTCCTGGGATCCTCATCCCCAATCCTGCTCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CCA 90 bp | CGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGACATGTACTGTCACCTaGAATCCCCGCCGAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQQWAAWPEVTSCIVGQQTCTVT*NPRRKV Trigger: CACCTTTCGGCGGGGATTCCAGGTGACAGTACATGT...CTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTGGGTACATGTACTGTCACCTaGAATCCCCGCCGAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSWSLCHCFSPWVHQVGTCTVT*NPRRKV Trigger: CACCTTTCGGCGGGGATTCCAGGTGACAGTACATGT...ACCCACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| 3UTR CAA 72 bp | AGCCTCACCACGTCCTTCCTGGAGCCGCCACTTCATTaGTGTCACCAAGTGCTCAAAGCGGTACTGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTSFLEPPLH*CHQVLKAVLRW Trigger: CCATCTCAGTACCGCTTTGAGCACTTGGTGACACAAATGAAGTGGCGGCTCCAGGAAGGACGTGGTGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| CDS-3UTR TCA 90 bp | GGAAATGAAGCAGGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTCGGGGCAGTAGGAGGTaGGGCCAAAGATGGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GNEAGICIGTQPRIGAQSRGSRR*GQRWWC Trigger: ACACCACCATCTTTGGCCTCACCTCCTACTGCCCCG...AGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCCTGCTTCATTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAAGGCAGCCAGGCTGCTTaGGGACCCGCTCCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIMQRIFQQIPEFMGTQEGSQAA*GPAPAG Trigger: GCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCC...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTGGCTTGTACATCCGTaGCATGACCGATGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGSMAGSHLMYCRTAVELWLVHP*HDRCLW Trigger: CCAAAGGCATCGGTCATGTCACGGATGTACAAGCCA...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTGGTGACTGGGCAAACTaGTGGGCAGCAGTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSMAGSHLMYCRTAVELFGDWAN*WAAVTA Trigger: TGCTGTCACTGCTGCCCAGCAGTTTGCCCAGTCACC...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR GCA 90 bp | TGTGGAAGGAGAGAAACTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCAACTCTGTCAACTGTTaGATGAGCTCCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CGRRETDMQLAFGVPSPSNSVNC*MSSSCS Trigger: GGAGCAGGAGGAGCTCATGCAACAGTTGACAGAGTT...GCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTGGCCTGGGCCTCTCCTaGTGTGATGGCTTGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: GSMAGSHLMYCRTAVELFGLGLS*CDGLYI Trigger: GATGTACAAGCCATCACAGCAGGAGAGGCCCAGGCC...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | GGAAATGAAGCAGGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTAGGACCCGCTCCAGCTaGCGAACTGTCCTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GNEAGICIGTQPRIGAQSRTRSS*RTVLST Trigger: AGTGGAGAGGACAGTTCGCCAGCTGGAGCGGGTCCT...AGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCCTGCTTCATTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGCCTTCTCCCCTGTCCGCAGCTTGTCCTTTGCGTGGATCTTTTCCACCACACAGTCCCCACCTCTaGGACTGTGTAGATTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLPSPLSAACPLRGSFPPHSPHL*DCVDFI Trigger: GATGAAATCTACACAGTCCCAGAGGTGGGGACTGTG...TGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGGACAGGGGAGAAGGCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166252.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCCTTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACACAAACACTGAGCAGATaGTGGGATTCATCTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPFLLGPSNRGKGVITTQTLSR*WDSSRD Trigger: GTCCCGAGATGAATCCCACCATCTGCTCAGTGTTTG...TGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAAGGGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTCCCGCCGAAAGGTGGTaGCGTGGAACAGTAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: GSMAGSHLMYCRTAVELFPAERW*RGTVGL Trigger: TAGTCCTACTGTTCCACGCCACCACCTTTCGGCGGG...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAAAGCCCATGGTGGCCTaGGCCTCTCCTGCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FPPGSQQQREGGDHYKLLKPMVA*ASPAVM Trigger: CATCACAGCAGGAGAGGCCCAGGCCACCATGGGCTT...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| 3UTR CAA 72 bp | AACTCTGTCAACTGTTGCATGAGCTCCTCCTGCTCCTaGCTGTTGGTGAGGGGCGGCAGGATATTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSVNCCMSSSCS*LLVRGGRIFRK Trigger: CTTCCTGAATATCCTGCCGCCCCTCACCAACAGCAAGGAGCAGGAGGAGCTCATGCAACAGTTGACAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTCTGTCAACTGTTGCATaGGCTCCTCCTGCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSMAGSHLMYCRTAVELFLSTVA*APPAPC Trigger: GCAAGGAGCAGGAGGAGCTCATGCAACAGTTGACAG...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR TCA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGCTCTGCCTCAAACACTaGGCAGATGGTGGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGSMAGSHLMYCRTAVELLCLKH*ADGGIH Trigger: ATGAATCCCACCATCTGCTCAGTGTTTGAGGCAGAG...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGCCAAAGATGGTGGTGTaGAGGTATTTATGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGSMAGSHLMYCRTAVELPKMVV*RYLWWP Trigger: GGGCCACCATAAATACCTGCACACCACCATCTTTGG...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR GCA 90 bp | GGAAATGAAGCAGGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTGGTGACTGGGCAAACTaGTGGGCAGCAGTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNEAGICIGTQPRIGAQSGDWAN*WAAVTA Trigger: TGCTGTCACTGCTGCCCAGCAGTTTGCCCAGTCACC...AGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCCTGCTTCATTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTGGTTGCGCTGGATGCTaGATACCCTCAGCTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSMAGSHLMYCRTAVELFGCAGC*IPSAPR Trigger: TCTTGGAGCTGAGGGTATGCAGCATCCAGCGCAACC...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGGCCCTTGCGAAGCAATaGACGGTCAAAGTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVGSMAGSHLMYCRTAVEALAKQ*TVKVSK Trigger: CTTGGAGACTTTGACCGTGCATTGCTTCGCAAGGGC...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR GCA 90 bp | GGAAATGAAGCAGGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTGGCCTGGGCCTCTCCTaGTGTGATGGCTTGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: GNEAGICIGTQPRIGAQSGLGLS*CDGLYI Trigger: GATGTACAAGCCATCACAGCAGGAGAGGCCCAGGCC...AGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCCTGCTTCATTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGGGTACGGAGGGTTGTTaGCTTTACCTCCTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVGSMAGSHLMYCRTAVEGTEGC*LYLLCS Trigger: GGAACAGAGGAGGTAAAGCCAACAACCCTCCGTACC...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CCA 90 bp | TCCAGCAGACAAGACCAGGCAGCTGCAGGGTTAATGACCCAACCAGGGGAGCACAGATCTAGGAACTGTTaGTTGTCAGGGACCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRQDQAAAGLMTQPGEHRSRNC*LSGTFR Trigger: ACGAAAGGTCCCTGACAACCAACAGTTCCTAGATCT...GTGCTCCCCTGGTTGGGTCATTAACCCTGCAGCTGCCTGGTCTTGTCTGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CCA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGCGAAAGGTGGTGGCGTaGAACAGTAGGACTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGSMAGSHLMYCRTAVELRKVVA*NSRTIS Trigger: AGAGATAGTCCTACTGTTCCACGCCACCACCTTTCG...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTCATGACCGATGCCTTTaGTCACACCCTCCCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSMAGSHLMYCRTAVELFHDRCL*SHPPGT Trigger: TGTTCCGGGAGGGTGTGACCAAAGGCATCGGTCATG...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| 3UTR CAA 72 bp | TTATGGTGGCCCGCCAGGTCAATGAAGGTGATCATCTaGGAGCTGCTCTCACAGATCTCTTCTGCAGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LWWPARSMKVII*ELLSQISSAVR Trigger: ACGGACTGCAGAAGAGATCTGTGAGAGCAGCTCCAAGATGATCACCTTCATTGACCTGGCGGGCCACCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169383.8 |
||
| CDS-3UTR TCA 90 bp | ACATATATATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAGGTGGCGGAAAAGGTTaGGCCGGGCCCGGCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TYISIMQRIFQQIPEFMGGGGKG*AGPGPA Trigger: GGCGGGGCCGGGCCCGGCTCAACCTTTTCCGCCACC...TCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATATATATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | GACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCACTCTTCTGCAGTCCGTaGGTCGCTGTAATTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DSTQDRSTVCHGLCAIASLFCSP*VAVIHH Trigger: GTGGTGAATTACAGCGACTCACGGACTGCAGAAGAG...TGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | ATCGGGACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTCTGCCTCAAACACTaGGCAGATGGTGGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IGTQPRIGAQSVMVSVPLLCLKH*ADGGIH Trigger: ATGAATCCCACCATCTGCTCAGTGTTTGAGGCAGAG...CAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGTCCCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTGAATACAGACTTCCCTaGAGAAGTGGGACCCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSMAGSHLMYCRTAVELFEYRLP*RSGTRL Trigger: CAACCGGGTCCCACTTCTTCAGGGAAGTCTGTATTC...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR GCA 90 bp | AACATAACTGTGGAAGGAGAGAAACTGACATGCAGCTGGCCTTTGGTGTGCCAATTCTCTGCCATCCGGTaGAGGGTCTTGAGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NITVEGEKLTCSWPLVCQFSAIR*RVLREA Trigger: GGCTTCCCTCAAGACCCTGCACCGGATGGCAGAGAA...TTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCACAGTTATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAACATGCCCCAACCTTCTCTaGCATCCGGTGCAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSGPMATTQSEKAWKPTCPNLL*HPVQGL Trigger: AAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCA...TGTTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | CCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAAACTCTGTCAACTGTTaGATGAGCTCCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTVGSMAGSHLMYCRTAVNSVNC*MSSSCS Trigger: GGAGCAGGAGGAGCTCATGCAACAGTTGACAGAGTT...TACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR GCA 90 bp | ACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGCCGCAGCTTGTCCTTTaGGTGGATCTTTTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQPRIGAQSVMVSVPLLQPQLVL*VDLFHH Trigger: GTGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGG...CTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAAGACTGCCCCTCCCACTaGCTTCTCCCCTGTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIMQRIFQQIPEFMGTQEDCPSH*LLPCPQ Trigger: CTGCGGACAGGGGAGAAGGCAGTGGGAGGGGCAGTC...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | AGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAAGCTAACAAAGGGCTTCTCCCTCAGGACTaGCCCTCCCACTGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RIFQQIPEFMGTQEANKGLLPQD*PSHCLL Trigger: GAGAAGGCAGTGGGAGGGGCAGTCCTGAGGGAGAAG...CCCTTTGTTAGCTTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCCTTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAGATCTAGGAACTGTTaGTTGTCAGGGACCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPFLLGPSNRGKGVITTRSRNC*LSGTFR Trigger: ACGAAAGGTCCCTGACAACCAACAGTTCCTAGATCT...TGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAAGGGGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAGTGACATTGGGTGACTaGGCAAACTGCTGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPPGSQQQREGGDHYKLLVTLGD*ANCWAA Trigger: TGCTGCCCAGCAGTTTGCCCAGTCACCCAATGTCAC...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | CCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAACACTGAGCAGATGGTaGGATTCATCTCGGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTVGSMAGSHLMYCRTAVTLSRW*DSSRDS Trigger: TGAGTCCCGAGATGAATCCCACCATCTGCTCAGTGT...TACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | CCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTACAAACACTGAGCAGATaGTGGGATTCATCTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTVGSMAGSHLMYCRTAVQTLSR*WDSSRD Trigger: GTCCCGAGATGAATCCCACCATCTGCTCAGTGTTTG...TACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTGGGTCACCTTCAGGTATTCTaGGTGTTTCAGGAAACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSWSLCHCFSPWVHQVGHLQVF*VFQETE Trigger: TTCCGTTTCCTGAAACACCCAGAATACCTGAAGGTG...ACCCACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTACATGACCGATGCCTTTaGTCACACCCTCCCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FPPGSQQQREGGDHYKLLHDRCL*SHPPGT Trigger: TGTTCCGGGAGGGTGTGACCAAAGGCATCGGTCATG...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCCTCTCACCTTTGCGTaGATCTTTTCCACCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVGSMAGSHLMYCRTAVEPLTFA*IFSTTA Trigger: AGCAGTGGTGGAAAAGATCCACGCAAAGGTGAGAGG...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGACTTCCCTGAAGAAGTaGGACCCGGTTGAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVGSMAGSHLMYCRTAVETSLKK*DPVEMG Trigger: TCCCATTTCAACCGGGTCCCACTTCTTCAGGGAAGT...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTATGCTCAAAGCGGTACTaGGATGGGTTCACCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPPGSQQQREGGDHYKLLCSKRY*DGFTSF Trigger: GAAGCTGGTGAACCCATCTCAGTACCGCTTTGAGCA...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | GATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCAAAGCGGTACTGAGATaGGTTCACCAGCTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DRSTVCHGLCAIASVPGSKAVLR*VHQLQF Trigger: AAACTGAAGCTGGTGAACCCATCTCAGTACCGCTTT...GGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGAGCTTGTCCTTTGCGTaGATCTTTTCCACCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVGSMAGSHLMYCRTAVESLSFA*IFSTTA Trigger: AGCAGTGGTGGAAAAGATCCACGCAAAGGACAAGCT...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CCA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGCACCTTCAGGTATTCTaGGTGTTTCAGGAAACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGSMAGSHLMYCRTAVELHLQVF*VFQETE Trigger: TTCCGTTTCCTGAAACACCCAGAATACCTGAAGGTG...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGGCTTCCCTCCTCAGATaGAGTCAGAATACAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVGSMAGSHLMYCRTAVEASLLR*SQNTDF Trigger: GAAGTCTGTATTCTGACTCCATCTGAGGAGGGAAGC...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR TCA 90 bp | AGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAAGCTAACAAAGGGCATCATCCTCAGAGGTaGCCAGCATGGGGACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIFQQIPEFMGTQEANKGHHPQR*PAWGPC Trigger: ACAAGGTCCCCATGCTGGTCACCTCTGAGGATGATG...CCCTTTGTTAGCTTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTGATCTTTTCCACCACTaGTGTTTGACGTACGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSMAGSHLMYCRTAVELFDLFHH*CLTYVA Trigger: GGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATC...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CCA 90 bp | TATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAGGACCCGCTCCAGCTaGCGAACTGTCCTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YLLCRESSNKSLSSWEPRRTRSS*RTVLST Trigger: AGTGGAGAGGACAGTTCGCCAGCTGGAGCGGGTCCT...CCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | TATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAGCATGGGGACCTTGTaGCAGCCAGGCTGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLLCRESSNKSLSSWEPRSMGTL*QPGCLR Trigger: CCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCT...CCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAAGTGACATTGGGTGACTaGGCAAACTGCTGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQVTLGD*ANCWAA Trigger: TGCTGCCCAGCAGTTTGCCCAGTCACCCAATGTCAC...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | GGAAATGAAGCAGGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTACACTGAGCAGATGGTaGGATTCATCTCGGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GNEAGICIGTQPRIGAQSTLSRW*DSSRDS Trigger: TGAGTCCCGAGATGAATCCCACCATCTGCTCAGTGT...AGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCCTGCTTCATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAACACTGAGCAGATGGTaGGATTCATCTCGGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPPGSQQQREGGDHYKLLTLSRW*DSSRDS Trigger: TGAGTCCCGAGATGAATCCCACCATCTGCTCAGTGT...TAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | GACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAAGCTTGTCCTTTGCGTaGATCTTTTCCACCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSTQDRSTVCHGLCAIASSLSFA*IFSTTA Trigger: AGCAGTGGTGGAAAAGATCCACGCAAAGGACAAGCT...TGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| 3UTR CAA 72 bp | CTTGTCCTTTGCGTGGATCTTTTCCACCACTGCTGTTaGACGTACGTTGCCCACATGTACTGTCACCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVLCVDLFHHCC*TYVAHMYCHLE Trigger: TTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166252.8 ENSMUST00000169383.8 |
||
| CDS-3UTR GCA 90 bp | TATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAGCGGTTGCGCTGGATaGTGCATACCCTCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLLCRESSNKSLSSWEPRSGCAG*CIPSAP Trigger: TGGAGCTGAGGGTATGCAGCATCCAGCGCAACCGCT...CCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAACCGCAGCTTGTCCTTTaGGTGGATCTTTTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQPQLVL*VDLFHH Trigger: GTGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGG...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAATCACCACGTCCTTCCTaGAGCCGCCACTTCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQSPRPS*SRHFIC Trigger: ACAAATGAAGTGGCGGCTCCAGGAAGGACGTGGTGA...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAAAACAAGAAAAAAGCATGGGGACCTTGTaGCAGCCAGGCTGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQQQREGGDHYKLLKQEKSMGTL*QPGCLR Trigger: CCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCT...TTTTTCTTGTTTTAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAAAACAAGAAAAATTCCAGTGTTGGCACTaGCGAGGAGCAGGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQQQREGGDHYKLLKQEKFQCWH*RGAGHS Trigger: ACTGTGCCCTGCTCCTCGTCAGTGCCAACACTGGAA...TTTTTCTTGTTTTAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAAAACAAGAAAAATGCCCCAACCTTCTCTaGCATCCGGTGCAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQQQREGGDHYKLLKQEKCPNLL*HPVQGL Trigger: AAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCA...TTTTTCTTGTTTTAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAACAGATCTTTTCCACCACTaGTGTTTGACGTACGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGSGPMATTQSEKAWKPTDLFHH*CLTYVA Trigger: GGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATC...TGTTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | AGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAAGCTAACAAAGGGCGAAAGGTGGTGGCGTaGAACAGTAGGACTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIFQQIPEFMGTQEANKGRKVVA*NSRTIS Trigger: AGAGATAGTCCTACTGTTCCACGCCACCACCTTTCG...CCCTTTGTTAGCTTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAATCCACCACTGCTGTTTaGCGTACGTTGCCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: SIMQRIFQQIPEFMGTQESTTAV*RTLPTC Trigger: ACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGA...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAATGGCTTGTACATCCGTaGCATGACCGATGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIMQRIFQQIPEFMGTQEWLVHP*HDRCLW Trigger: CCAAAGGCATCGGTCATGTCACGGATGTACAAGCCA...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAAAACAAGAAAAATGCTCAAAGCGGTACTaGGATGGGTTCACCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQQQREGGDHYKLLKQEKCSKRY*DGFTSF Trigger: GAAGCTGGTGAACCCATCTCAGTACCGCTTTGAGCA...TTTTTCTTGTTTTAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | TATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGCACAGTCCCCACCTCTaGGACTGTGTAGATTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: YLLCRESSNKSLSSWEPRHSPHL*DCVDFI Trigger: GATGAAATCTACACAGTCCCAGAGGTGGGGACTGTG...CCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | ACATATATATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGACCCGCCGAAAGGTGGTaGCGTGGAACAGTAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: TYISIMQRIFQQIPEFMGPAERW*RGTVGL Trigger: TAGTCCTACTGTTCCACGCCACCACCTTTCGGCGGG...TCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATATATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAAAACAAGAAAAAGATCTTTTCCACCACTaGTGTTTGACGTACGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQQQREGGDHYKLLKQEKDLFHH*CLTYVA Trigger: GGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATC...TTTTTCTTGTTTTAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR GCA 90 bp | ACATATATATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAGCCCTTGCGAAGCAATaGACGGTCAAAGTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TYISIMQRIFQQIPEFMGALAKQ*TVKVSK Trigger: CTTGGAGACTTTGACCGTGCATTGCTTCGCAAGGGC...TCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATATATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | ACATATATATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAGGTACGGAGGGTTGTTaGCTTTACCTCCTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TYISIMQRIFQQIPEFMGGTEGC*LYLLCS Trigger: GGAACAGAGGAGGTAAAGCCAACAACCCTCCGTACC...TCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATATATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAAAACAAGAAAAAAAAGCGGTACTGAGATaGGTTCACCAGCTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQQQREGGDHYKLLKQEKKAVLR*VHQLQF Trigger: AAACTGAAGCTGGTGAACCCATCTCAGTACCGCTTT...TTTTTCTTGTTTTAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGA 42% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CCA 90 bp | ACATATATATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGACACAGTCCCCACCTCTaGGACTGTGTAGATTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TYISIMQRIFQQIPEFMGHSPHL*DCVDFI Trigger: GATGAAATCTACACAGTCCCAGAGGTGGGGACTGTG...TCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATATATATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CAA 90 bp | GCACCACAAATAGCACCAAGTGGGGCCTATGACAGGAGGGTCCGGGGAAGCGGCGCCCGGCCCCGCCCGTaGTCCAGCTCTCCTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: APQIAPSGAYDRRVRGSGARPRP*SSSPWV Trigger: GACCCAAGGAGAGCTGGACAACGGGCGGGGCCGGGC...GCCGCTTCCCCGGACCCTCCTGTCATAGGCCCCACTTGGTGCTATTTGTGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCTGGCAGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCCGACACGCAGAGCGGTaGCGCTGGATGCTGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: EPGSPTPEPAPQIAPSGARHAER*RWMLHT Trigger: GGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTCG...GGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCTGCCAGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGCTGCAGGGTTAATGACCCAACCAGGGGAGCACACAGCTGCTGAGCACATCCGGTGCAGGGTCTaGAGGGAAGCCCGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QAAAGLMTQPGEHTAAEHIRCRV*REARIS Trigger: GGAGATGCGGGCTTCCCTCAAGACCCTGCACCGGAT...GTGCTCAGCAGCTGTGTGCTCCCCTGGTTGGGTCATTAACCCTGCAGCTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CAA 90 bp | CAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCAGGTGGCGGAAAAGGTaGAGCCGGGCCCGGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QPRIGAQSVMVSVPLLQSRWRKR*SRARPR Trigger: GCGGGGCCGGGCCCGGCTCAACCTTTTCCGCCACCT...GGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCCACGCCTGAGCCAGCACCACAAATAGCACCAAGTGGGGCCTATGACAGGCCGGCGATTCCAGTGTaGGCACTGACGAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPTPEPAPQIAPSGAYDRPAIPV*ALTRSR Trigger: CCTGCTCCTCGTCAGTGCCAACACTGGAATCGCCGG...CCTGTCATAGGCCCCACTTGGTGCTATTTGTGGTGCTGGCTCAGGCGTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS CCA 90 bp | CCACTGCCTTCTCCCCTGTCCGCAGCTTGTCCTTCAGGAGAAAAGTaGTCACGGCCCAGGCAGGTGCCTCCCATCCCATCATTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLPSPLSAACPSGEK*SRPRQVPPIPSFSA Trigger: GGCAGAGAATGATGGGATGGGAGGCACCTGCCTGGGCCGTGACCACTTTTCTCCTGAAGGACAAGCTGCGGACAGGGGAGAAGGCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTGCCCGGCCCCGCCCGTaGTCCAGCTCTCCTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSMAGSHLMYCRTAVELFARPRP*SSSPWV Trigger: GACCCAAGGAGAGCTGGACAACGGGCGGGGCCGGGC...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CAA 90 bp | GCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTACCAGCATGGGGACCTaGTGGCAGCCAGGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AQSVMVSVPLLQSLGPPGTSMGT*WQPGCL Trigger: CAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGT...ACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGACCAGCATGGGGACCTaGTGGCAGCCAGGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VGSMAGSHLMYCRTAVELTSMGT*WQPGCL Trigger: CAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGT...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CAA 90 bp | TCTTCCCCTTTCCTCCTGGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACATCCTGCTCCTTGCTGTaGGTGAGGGGCGGCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SSPFLLGPSNRGKGVITTSCSLL*VRGGRI Trigger: TATCCTGCCGCCCCTCACCAACAGCAAGGAGCAGGA...TGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCCAGGAGGAAAGGGGAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CAA 90 bp | GCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTTCCTGCTCCTTGCTGTaGGTGAGGGGCGGCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: AQSVMVSVPLLQSLGPPGSCSLL*VRGGRI Trigger: TATCCTGCCGCCCCTCACCAACAGCAAGGAGCAGGA...ACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS TCA 90 bp | TGGAGCCGCCACTTCATTTGTGTCACCAAGTGCTCAAAGCGGTACTaGGATGGGTTCACCAGCTTCAGCTCTGGGGGCAGGTACGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WSRHFICVTKCSKRY*DGFTSFSSGGRYGG Trigger: CCCTCCGTACCTGCCCCCAGAGCTGAAGCTGGTGAACCCATCTCAGTACCGCTTTGAGCACTTGGTGACACAAATGAAGTGGCGGCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166563.2 |
||
| CDS-3UTR CAA 90 bp | GGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTAGCTCCTCCTGCTCCTaGCTGTTGGTGAGGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GICIGTQPRIGAQSVMVSSSSCS*LLVRGG Trigger: GCCGCCCCTCACCAACAGCAAGGAGCAGGAGGAGCT...AGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CAA 90 bp | GCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCACCAGGTTCCCGGAACAGCAGTTaGGCGCCCACCTTCAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: AQSVMVSVPLLQSLGPPGSRNSS*APTFRY Trigger: ATACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGA...ACCTGGTGGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS TCA 90 bp | GTGTTAGGCTTCCCTCCTCAGATGGAGTCAGAATACAGACTTCCCTaGAGAAGTGGGACCCGGTTGAAATGGGACCCGGCTGGGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLGFPPQMESEYRLP*RSGTRLKWDPAGSL Trigger: GAGGGACCCAGCCGGGTCCCATTTCAACCGGGTCCCACTTCTTCAGGGAAGTCTGTATTCTGACTCCATCTGAGGAGGGAAGCCTAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS CCA 90 bp | CAGACTTCCCTGAAGAAGTGGGACCCGGTTGAAATGGGACCCGGCTaGGTCCCTCTCACCTTTGCGTGGATCTTTTCCACCACTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QTSLKKWDPVEMGPG*VPLTFAWIFSTTAV Trigger: AACAGCAGTGGTGGAAAAGATCCACGCAAAGGTGAGAGGGACCCAGCCGGGTCCCATTTCAACCGGGTCCCACTTCTTCAGGGAAGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR CAA 90 bp | CCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTACCCACCAGCAGCCCATaGTCCTCTACCCCAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTVGSMAGSHLMYCRTAVPTSSP*SSTPIW Trigger: CCAGATTGGGGTAGAGGACAATGGGCTGCTGGTGGG...TACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CAA 90 bp | AGCCGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGGTTGTCCAGCTCTCCTaGGGTCAGGACTCCAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRQQWAAWPEVTSCIVGQVVQLS*GQDSKQ Trigger: TTGCTTGGAGTCCTGACCCAAGGAGAGCTGGACAAC...CTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
||
| CDS-3UTR CAA 90 bp | TGTGGAAGGAGAGAAACTGACATGCAGCTGGCCTTTGGTGTGCCAAGCCCGAGCGTTGTCCAGCTCTCCTaGGGTCAGGACTCCAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CGRRETDMQLAFGVPSPSVVQLS*GQDSKQ Trigger: TTGCTTGGAGTCCTGACCCAAGGAGAGCTGGACAAC...GCTCGGGCTTGGCACACCAAAGGCCAGCTGCATGTCAGTTTCTCTCCTTCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTCGACACGCAGAGCGGTaGCGCTGGATGCTGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: GSMAGSHLMYCRTAVELFRHAER*RWMLHT Trigger: GGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTCG...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTCCCGGAACAGCAGTTaGGCGCCCACCTTCAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: VGSMAGSHLMYCRTAVELSRNSS*APTFRY Trigger: ATACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGA...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
||
| CDS-3UTR CAA 90 bp | CGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGGGGTCCCTCTCACCTTaGCGTGGATCTTTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RQQWAAWPEVTSCIVGQQGSLSP*RGSFPP Trigger: TGGTGGAAAAGATCCACGCAAAGGTGAGAGGGACCC...CTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS-3UTR CAA 90 bp | CGCCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTCCCCTGTCCGCAGCTaGTCCTTCAGGAGAAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQQWAAWPEVTSCIVGQQSPVRS*SFRRKV Trigger: CACTTTTCTCCTGAAGGACAAGCTGCGGACAGGGGA...CTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS TCA 90 bp | TGGGTCCCTCTCACCTTTGCGTGGATCTTTTCCACCACTGCTGTTTaGCGTACGTTGCCCACATGTACTGTCACCTGGAATCCCCGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WVPLTFAWIFSTTAV*RTLPTCTVTWNPRR Trigger: TCGGCGGGGATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGTGAGAGGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS GCA 90 bp | ACCCGGCTGGGTCCCTCTCACCTTTGCGTGGATCTTTTCCACCACTaGTGTTTGACGTACGTTGCCCACATGTACTGTCACCTGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: TRLGPSHLCVDLFHH*CLTYVAHMYCHLES Trigger: GGATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGTGAGAGGGACCCAGCCGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
||
| CDS CCA 90 bp | CCGCCACTTCATTTGTGTCACCAAGTGCTCAAAGCGGTACTGAGATaGGTTCACCAGCTTCAGCTCTGGGGGCAGGTACGGAGGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPLHLCHQVLKAVLR*VHQLQLWGQVRRVV Trigger: AACAACCCTCCGTACCTGCCCCCAGAGCTGAAGCTGGTGAACCCATCTCAGTACCGCTTTGAGCACTTGGTGACACAAATGAAGTGGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166563.2 |
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| CDS-3UTR CAA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAAAGGTGGCGGAAAAGGTaGAGCCGGGCCCGGCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: SIMQRIFQQIPEFMGTQERWRKR*SRARPR Trigger: GCGGGGCCGGGCCCGGCTCAACCTTTTCCGCCACCT...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | GGAAATGAAGCAGGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTCGACACGCAGAGCGGTaGCGCTGGATGCTGCATACC | + |
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Preference number: 5 (lower is better) Translates to: GNEAGICIGTQPRIGAQSRHAER*RWMLHT Trigger: GGTATGCAGCATCCAGCGCAACCGCTCTGCGTGTCG...AGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCCTGCTTCATTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS TCA 90 bp | AGATGGAGTCAGAATACAGACTTCCCTGAAGAAGTGGGACCCGGTTaGAATGGGACCCGGCTGGGTCCCTCTCACCTTTGCGTGGATCTT | + |
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Preference number: 5 (lower is better) Translates to: RWSQNTDFPEEVGPG*NGTRLGPSHLCVDL Trigger: AAGATCCACGCAAAGGTGAGAGGGACCCAGCCGGGTCCCATTTCAACCGGGTCCCACTTCTTCAGGGAAGTCTGTATTCTGACTCCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS-3UTR CAA 90 bp | GGAATATGCATCGGGACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGGCAGGTACGGAGGGTaGTTGGCTTTACCTCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GICIGTQPRIGAQSVMVSGRYGG*LALPPL Trigger: CAGAGGAGGTAAAGCCAACAACCCTCCGTACCTGCC...AGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGTCCCGATGCATATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | GATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCCTGGGTCCTCCGCAGCTTGTCCTTaGCGTGGATCTTTTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: DRSTVCHGLCAIASVPGSSAACP*RGSFPP Trigger: TGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGGA...GGACCCAGGGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | GTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGAATATAGGGGTGACATaGGGTGACTGGGCAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: VGSMAGSHLMYCRTAVELNIGVT*GDWANC Trigger: GCAGTTTGCCCAGTCACCCAATGTCACCCCTATATT...CAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
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| CDS-3UTR CAA 90 bp | ACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGTTCCACCACTGCTGTTaGACGTACGTTGCCCACATG | + |
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Preference number: 5 (lower is better) Translates to: TVGSMAGSHLMYCRTAVEFHHCC*TYVAHM Trigger: CATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAA...CTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
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| CDS-3UTR CAA 90 bp | ATCGGGACTCAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGTCCGCAGCTTGTCCTTaGCGTGGATCTTTTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: IGTQPRIGAQSVMVSVPLSAACP*RGSFPP Trigger: TGGTGGAAAAGATCCACGCAAAGGACAAGCTGCGGA...CAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTGAGTCCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | CCAACAGTGGGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTATCCTGCTGTGATGGCTaGTACATCCGTGACATGACC | + |
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Preference number: 5 (lower is better) Translates to: PTVGSMAGSHLMYCRTAVSCCDG*YIRDMT Trigger: GGTCATGTCACGGATGTACAAGCCATCACAGCAGGA...TACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCCCACTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
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| CDS-3UTR CAA 90 bp | TATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAGCTCCTCCTGCTCCTaGCTGTTGGTGAGGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: YLLCRESSNKSLSSWEPRSSSCS*LLVRGG Trigger: GCCGCCCCTCACCAACAGCAAGGAGCAGGAGGAGCT...CCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | GGCAGCATGGCCGGAAGTCACCTCATGTATTGTAGGACAGCAGTAGAGCTGTTTTTCCACCACTGCTGTTaGACGTACGTTGCCCACATG | + |
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Preference number: 5 (lower is better) Translates to: GSMAGSHLMYCRTAVELFFHHCC*TYVAHM Trigger: CATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAA...AAACAGCTCTACTGCTGTCCTACAATACATGAGGTGACTTCCGGCCATGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000166701.2 |
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| CDS-3UTR CAA 90 bp | CAACCCAGGATAGGAGCACAGTCTGTCATGGTCTCTGTGCCATTGCTTCAGTCCTCTAGGAACTGTTGGTaGTCAGGGACCTTTCGTACT | + |
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Preference number: 5 (lower is better) Translates to: QPRIGAQSVMVSVPLLQSSRNCW*SGTFRT Trigger: AGTACGAAAGGTCCCTGACAACCAACAGTTCCTAGA...GGACTGAAGCAATGGCACAGAGACCATGACAGACTGTGCTCCTATCCTGGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | TATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGCCGGCGATTCCAGTGTaGGCACTGACGAGGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: YLLCRESSNKSLSSWEPRPAIPV*ALTRSR Trigger: CCTGCTCCTCGTCAGTGCCAACACTGGAATCGCCGG...CCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAAGGCAGGTACGGAGGGTaGTTGGCTTTACCTCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SIMQRIFQQIPEFMGTQEGRYGG*LALPPL Trigger: CAGAGGAGGTAAAGCCAACAACCCTCCGTACCTGCC...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAATTCCACCACTGCTGTTaGACGTACGTTGCCCACATG | + |
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Preference number: 5 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQFHHCC*TYVAHM Trigger: CATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAA...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | ACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAACATCTAGGAACTGTTGGTaGTCAGGGACCTTTCGTACT | + |
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Preference number: 5 (lower is better) Translates to: TGSGPMATTQSEKAWKPTSRNCW*SGTFRT Trigger: AGTACGAAAGGTCCCTGACAACCAACAGTTCCTAGA...TGTTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | AAACTGGGTCAGGTCCTATGGCTACCACACAATCTGAAAAAGCATGGAAGCCAAAATATAGGGGTGACATaGGGTGACTGGGCAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: KLGQVLWLPHNLKKHGSQNIGVT*GDWANC Trigger: GCAGTTTGCCCAGTCACCCAATGTCACCCCTATATT...TTGGCTTCCATGCTTTTTCAGATTGTGTGGTAGCCATAGGACCTGACCCAGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | GGGTCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAAAACAAGAAATGAAGGTGATCATCTaGGAGCTGCTCTCACAGATC | + |
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Preference number: 5 (lower is better) Translates to: GSQQQREGGDHYKLLKQEMKVII*ELLSQI Trigger: GATCTGTGAGAGCAGCTCCAAGATGATCACCTTCAT...TTCTTGTTTTAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | TCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGAACCCAGGAATCCTGCTGTGATGGCTaGTACATCCGTGACATGACC | + |
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Preference number: 5 (lower is better) Translates to: SIMQRIFQQIPEFMGTQESCCDG*YIRDMT Trigger: GGTCATGTCACGGATGTACAAGCCATCACAGCAGGA...TTCCTGGGTTCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024748.14 |
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| CDS-3UTR CAA 90 bp | ACATATATATCTATTATGCAGAGAATCTTCCAACAAATCCCTGAGTTCATGGGACCCACCAGCAGCCCATaGTCCTCTACCCCAATCTGG | + |
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Preference number: 5 (lower is better) Translates to: TYISIMQRIFQQIPEFMGPTSSP*SSTPIW Trigger: CCAGATTGGGGTAGAGGACAATGGGCTGCTGGTGGG...TCCCATGAACTCAGGGATTTGTTGGAAGATTCTCTGCATAATAGATATATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS-3UTR CAA 90 bp | TCCCAGCAACAGAGGGAAGGGGGTGATCACTACAAATTACTAAAACAAGAAAAAATGAAGGTGATCATCTaGGAGCTGCTCTCACAGATC | + |
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Preference number: 5 (lower is better) Translates to: SQQQREGGDHYKLLKQEKMKVII*ELLSQI Trigger: GATCTGTGAGAGCAGCTCCAAGATGATCACCTTCAT...TTTTTCTTGTTTTAGTAATTTGTAGTGATCACCCCCTTCCCTCTGTTGCTGGGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000024748.14 ENSMUST00000172170.8 |
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| CDS CAA 72 bp | CAGGTAGGCTGCTCCCCACCCCACAGGAAGGAGCCTTaGCTCCCGTTATGTGACCAGGGACTCTCAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QVGCSPPHRKEP*LPLCDQGLSAR Trigger: TCTGGCTGAGAGTCCCTGGTCACATAACGGGAGCAAAGGCTCCTTCCTGTGGGGTGGGGAGCAGCCTACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS CAA 90 bp | AGTGGGACCCGGTTGAAATGGGACCCGGCTGGGTCCCTCTCACCTTaGCGTGGATCTTTTCCACCACTGCTGTTTGACGTACGTTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SGTRLKWDPAGSLSP*RGSFPPLLFDVRCP Trigger: TGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGTGAGAGGGACCCAGCCGGGTCCCATTTCAACCGGGTCCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS CCA 72 bp | CTGAAGAAGTGGGACCCGGTTGAAATGGGACCCGGCTaGGTCCCTCTCACCTTTGCGTGGATCTTTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: LKKWDPVEMGPG*VPLTFAWIFST Trigger: GGTGGAAAAGATCCACGCAAAGGTGAGAGGGACCCAGCCGGGTCCCATTTCAACCGGGTCCCACTTCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS CAA 90 bp | CTGGGTCCCTCTCACCTTTGCGTGGATCTTTTCCACCACTGCTGTTaGACGTACGTTGCCCACATGTACTGTCACCTGGAATCCCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: LGPSHLCVDLFHHCC*TYVAHMYCHLESPP Trigger: CGGCGGGGATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGTGAGAGGGACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS TCA 72 bp | CAGAATACAGACTTCCCTGAAGAAGTGGGACCCGGTTaGAATGGGACCCGGCTGGGTCCCTCTCACCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: QNTDFPEEVGPG*NGTRLGPSHLC Trigger: GCAAAGGTGAGAGGGACCCAGCCGGGTCCCATTTCAACCGGGTCCCACTTCTTCAGGGAAGTCTGTATTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS GCA 72 bp | GTATTCTGGGTGTTTCAGGAAACGGAAACGCACCACTaGCTTCTCCCCTGTCCGCAGCTTGTCCTTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VFWVFQETETHH*LLPCPQLVLQE Trigger: CTCCTGAAGGACAAGCTGCGGACAGGGGAGAAGGCAGTGGTGCGTTTCCGTTTCCTGAAACACCCAGAATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS CCA 72 bp | CATTTGTGTCACCAAGTGCTCAAAGCGGTACTGAGATaGGTTCACCAGCTTCAGCTCTGGGGGCAGGTACGG | + |
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Preference number: 6 (lower is better) Translates to: HLCHQVLKAVLR*VHQLQLWGQVR Trigger: CCGTACCTGCCCCCAGAGCTGAAGCTGGTGAACCCATCTCAGTACCGCTTTGAGCACTTGGTGACACAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166563.2 |
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| CDS CCA 72 bp | TCAGATGGAGTCAGAATACAGACTTCCCTGAAGAAGTaGGACCCGGTTGAAATGGGACCCGGCTGGGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SDGVRIQTSLKK*DPVEMGPGWVP Trigger: AGGGACCCAGCCGGGTCCCATTTCAACCGGGTCCCACTTCTTCAGGGAAGTCTGTATTCTGACTCCATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS CAA 72 bp | CGGTTGAAATGGGACCCGGCTGGGTCCCTCTCACCTTaGCGTGGATCTTTTCCACCACTGCTGTTTGACGTA | + |
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Preference number: 6 (lower is better) Translates to: RLKWDPAGSLSP*RGSFPPLLFDV Trigger: TACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGTGAGAGGGACCCAGCCGGGTCCCATTTCAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS TCA 72 bp | CACTTCATTTGTGTCACCAAGTGCTCAAAGCGGTACTaGGATGGGTTCACCAGCTTCAGCTCTGGGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HFICVTKCSKRY*DGFTSFSSGGR Trigger: CCTGCCCCCAGAGCTGAAGCTGGTGAACCCATCTCAGTACCGCTTTGAGCACTTGGTGACACAAATGAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166563.2 |
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| CDS TCA 72 bp | TTCCCTCCTCAGATGGAGTCAGAATACAGACTTCCCTaGAGAAGTGGGACCCGGTTGAAATGGGACCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: FPPQMESEYRLP*RSGTRLKWDPA Trigger: AGCCGGGTCCCATTTCAACCGGGTCCCACTTCTTCAGGGAAGTCTGTATTCTGACTCCATCTGAGGAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS TCA 72 bp | CTCACCTTTGCGTGGATCTTTTCCACCACTGCTGTTTaGCGTACGTTGCCCACATGTACTGTCACCTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LTFAWIFSTTAV*RTLPTCTVTWN Trigger: ATTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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| CDS CAA 72 bp | TCTCACCTTTGCGTGGATCTTTTCCACCACTGCTGTTaGACGTACGTTGCCCACATGTACTGTCACCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SHLCVDLFHHCC*TYVAHMYCHLE Trigger: TTCCAGGTGACAGTACATGTGGGCAACGTACGTCAAACAGCAGTGGTGGAAAAGATCCACGCAAAGGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166701.2 |
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