Pregenerated sensors for GTPBP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040464Ensembl transcript IDs: ENSMUST00000088842.11, ENSMUST00000115441.9, ENSMUST00000119521.8, ENSMUST00000126855.8, ENSMUST00000128887.8, ENSMUST00000147244.2, ENSMUST00000198799.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGCTGGAGAAGAAGGCTTGGAAGTTAAGAACCCTGGCTGCTCTTaGAGAGGACCTGGTTCTGATTTCCGACACTTGCTTGGTGGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: GAGEEGLEVKNPGCS*RGPGSDFRHLLGGF Trigger: AAAGCCACCAAGCAAGTGTCGGAAATCAGAACCAGGTCCTCTGCAAGAGCAGCCAGGGTTCTTAACTTCCAAGCCTTCTTCTCCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CCA 90 bp | AACCACCAAACCAGCACGAGAGGCTGCAGCAGCAGGTCCATGAGCTaGCCAGAACCTACTAGGCCTACATCAGCTATGACTTTTAGGTCA | + |
|
Preference number: 1 (lower is better) Translates to: NHQTSTRGCSSRSMS*PEPTRPTSAMTFRS Trigger: TGACCTAAAAGTCATAGCTGATGTAGGCCTAGTAGGTTCTGGCCAGCTCATGGACCTGCTGCTGCAGCCTCTCGTGCTGGTTTGGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| 3UTR GCA 90 bp | AAGAAAGGGGCTGGAGAAGAAGGCTTGGAAGTTAAGAACCCTGGCTaGTCTTGCAGAGGACCTGGTTCTGATTTCCGACACTTGCTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: KKGAGEEGLEVKNPG*SCRGPGSDFRHLLG Trigger: ACCAAGCAAGTGTCGGAAATCAGAACCAGGTCCTCTGCAAGAGCAGCCAGGGTTCTTAACTTCCAAGCCTTCTTCTCCAGCCCCTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR TCA 90 bp | GAAACCCGACTCAGTAAGGAGGATTTTCCAGCATTTGGGAATCTATaGGGACTGTTCTCTTTAAAACCACCAAACCAGCACGAGAGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: ETRLSKEDFPAFGNL*GLFSLKPPNQHERL Trigger: CAGCCTCTCGTGCTGGTTTGGTGGTTTTAAAGAGAACAGTCCTCATAGATTCCCAAATGCTGGAAAATCCTCCTTACTGAGTCGGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| 3UTR GCA 90 bp | CTCTCTAAATGCTTGAGGAACTTGTGGCCCATGCCTTTGTTCATATaGGCTCCTTCTATCAAACCTGGGAGATCAGCTACTGAAATCTGT | + |
|
Preference number: 1 (lower is better) Translates to: LSKCLRNLWPMPLFI*APSIKPGRSATEIC Trigger: ACAGATTTCAGTAGCTGATCTCCCAGGTTTGATAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126855.8 ENSMUST00000128887.8 |
||
| 3UTR CCA 90 bp | GAGAATTTCAGTTCCAGGATATCTGACCCCCTCTTCTGGCTGTCATaGACACTTCATTCACACAGTCACACAGACTTACTTGAGGACAAA | + |
|
Preference number: 1 (lower is better) Translates to: ENFSSRISDPLFWLS*TLHSHSHTDLLEDK Trigger: TTTGTCCTCAAGTAAGTCTGTGTGACTGTGTGAATGAAGTGTCCATGACAGCCAGAAGAGGGGGTCAGATATCCTGGAACTGAAATTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CCA 90 bp | ACAAAAAGCAGTTGTCTGGTTCTCTCTAAATGCTTGAGGAACTTGTaGCCCATGCCTTTGTTCATATGCGCTCCTTCTATCAAACCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: TKSSCLVLSKCLRNL*PMPLFICAPSIKPG Trigger: CCCAGGTTTGATAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACTGCTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126855.8 ENSMUST00000128887.8 |
||
| 3UTR TCA 90 bp | GGACTCTCATTTATAATGGCTGTTCCTAACAACAGCTTATGTACATaGCCTCTAGCTTTCACACACCGTTGCCAGTTAAGCTCACTGAGA | + |
|
Preference number: 1 (lower is better) Translates to: GLSFIMAVPNNSLCT*PLAFTHRCQLSSLR Trigger: TCTCAGTGAGCTTAACTGGCAACGGTGTGTGAAAGCTAGAGGTCATGTACATAAGCTGTTGTTAGGAACAGCCATTATAAATGAGAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198799.2 |
||
| 3UTR GCA 90 bp | CCAGAAATATCAACAACAAAAAGCAGTTGTCTGGTTCTCTCTAAATaGTTGAGGAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: PEISTTKSSCLVLSK*LRNLWPMPLFICAP Trigger: AGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACTGCTTTTTGTTGTTGATATTTCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR TCA 90 bp | AAATATCAACAACAAAAAGCAGTTGTCTGGTTCTCTCTAAATGCTTaGGGAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCTTCTA | + |
|
Preference number: 1 (lower is better) Translates to: KYQQQKAVVWFSLNA*GTCGPCLCSYALLL Trigger: TAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACTGCTTTTTGTTGTTGATATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR TCA 90 bp | ATTATAGTTTCAAAGGCAGTCCTATATGGAGTTACAGAAGAAAGCTaGAACCCAGAAATATCAACAACAAAAAGCAGTTGTCTGGTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: IIVSKAVLYGVTEES*NPEISTTKSSCLVL Trigger: GAGAACCAGACAACTGCTTTTTGTTGTTGATATTTCTGGGTTTCAGCTTTCTTCTGTAACTCCATATAGGACTGCCTTTGAAACTATAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCCCAAGGGGTGTGGGAGAGGCCCACACCACCACGCTTACCAGAGCTTACCGTGCCTGGCTTCTTTaGACATCATGCTTTTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SFPRGVGEAHTTTLTRAYRAWLL*TSCFSG Trigger: GCCTGAAAAGCATGATGTTCAAAGAAGCCAGGCACG...GTAAGCTCTGGTAAGCGTGGTGGTGTGGGCCTCTCCCACACCCCTTGGGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCCCAAGGGGTGTGGGAGAGGCCCACACCACCACGCTTACCAGAGCTTACAGTGAACCATCTTGCTaGGCTAAAGCCAGAAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SFPRGVGEAHTTTLTRAYSEPSC*AKARRR Trigger: CCTTCTTCTGGCTTTAGCTCAGCAAGATGGTTCACT...GTAAGCTCTGGTAAGCGTGGTGGTGTGGGCCTCTCCCACACCCCTTGGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTATTAAAGAAAGGGGCTGGAGAAGAAGGCTTGGAAGTTAAGAACCCTGGCAGGTCTGTTGCCTCCTaGTCCTGTGTGCTGCTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KVLKKGAGEEGLEVKNPGRSVAS*SCVLLG Trigger: TCCAAGCAGCACACAGGAGCAGGAGGCAACAGACCT...GCCAGGGTTCTTAACTTCCAAGCCTTCTTCTCCAGCCCCTTTCTTTAATACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CAA 90 bp | TGTCTGGTTCTCTCTAAATGCTTGAGGAACTTGTGGCCCATGCCTTaGTTCATATGCGCTCCTTCTATCAAACCTGGGAGATCAGCTACT | + |
|
Preference number: 2 (lower is better) Translates to: CLVLSKCLRNLWPMP*FICAPSIKPGRSAT Trigger: AGTAGCTGATCTCCCAGGTTTGATAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126855.8 ENSMUST00000128887.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGGAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCTTCTATCAAACCTGGCCTACATCAGCTATaGCTTTTAGGTCAAGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LRNLWPMPLFICAPSIKPGLHQL*LLGQGE Trigger: TTCACCTTGACCTAAAAGTCATAGCTGATGTAGGCC...AGGTTTGATAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126855.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAACTTGGGCATCCGGCAAGTCCATCTTATTAATTGCTAAGAGTGCGGGTTTTGGAACTTGTGGCCCATaGCTTTGTTCATATGCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LTWASGKSILLIAKSAGFGTCGP*LCSYAL Trigger: GAGCGCATATGAACAAAGGCATGGGCCACAAGTTCC...AAAACCCGCACTCTTAGCAATTAATAAGATGGACTTGCCGGATGCCCAAGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTATTAAAGAAAGGGGCTGGAGAAGAAGGCTTGGAAGTTAAGAACCCTGGCTTTCCGACACTTGCTTaGTGGCTTTCCACTGTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KVLKKGAGEEGLEVKNPGFPTLA*WLSTVE Trigger: CTCTACAGTGGAAAGCCACCAAGCAAGTGTCGGAAA...GCCAGGGTTCTTAACTTCCAAGCCTTCTTCTCCAGCCCCTTTCTTTAATACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGGACTGTTCTCTTTAAAACCACCAAACCAGCACGAGAGGCTGCAGCAGCAGGATTTTCCAGCATTTaGGAATCTATGAGGACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: MRTVLFKTTKPAREAAAAGFSSI*ESMRTV Trigger: AACAGTCCTCATAGATTCCCAAATGCTGGAAAATCC...TGCTGCTGCAGCCTCTCGTGCTGGTTTGGTGGTTTTAAAGAGAACAGTCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATCTATGAGGACTGTTCTCTTTAAAACCACCAAACCAGCACGAGAGGCTGCATGTCTTCTTCTTTATTaGGTTCTCCTAGCACTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ESMRTVLFKTTKPAREAACLLLY*VLLALG Trigger: GCCAAGTGCTAGGAGAACTCAATAAAGAAGAAGACA...TGCAGCCTCTCGTGCTGGTTTGGTGGTTTTAAAGAGAACAGTCCTCATAGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCAATCACAGGTGTAGCATGGGAAACCCGACTCAGTAAGGAGGATTTTCCAAAAGGCAGTCCTATATaGAGTTACAGAAGAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SAITGVAWETRLSKEDFPKGSPI*SYRRKL Trigger: CAGCTTTCTTCTGTAACTCCATATAGGACTGCCTTT...TGGAAAATCCTCCTTACTGAGTCGGGTTTCCCATGCTACACCTGTGATTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR CAA 90 bp | ACAACAAAAAGCAGTTGTCTGGTTCTCTCTAAATGCTTGAGGAACTaGTGGCCCATGCCTTTGTTCATATGCGCTCCTTCTATCAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: TTKSSCLVLSKCLRN*WPMPLFICAPSIKP Trigger: AGGTTTGATAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACTGCTTTTTGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCTAAATGCTTGAGGAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCTTGGGAGATCAGCTACTaGAATCTGTTTGAAATCATT | + |
|
Preference number: 2 (lower is better) Translates to: LSKCLRNLWPMPLFICAPWEISY*NLFEII Trigger: AATGATTTCAAACAGATTTCAGTAGCTGATCTCCCA...AGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126855.8 ENSMUST00000128887.8 |
||
| 3UTR CAA 90 bp | GAAATATCAACAACAAAAAGCAGTTGTCTGGTTCTCTCTAAATGCTaGAGGAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: EISTTKSSCLVLSKC*RNLWPMPLFICAPS Trigger: AGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACTGCTTTTTGTTGTTGATATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCAAAGTAGGTTAGCCAGTGAGGACTCTTTGACCCAGTTATCCATTAGTCAGTGTACTAGGTTTGAATaGTGCCTTTTCTGGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: NQSRLASEDSLTQLSISQCTRFE*CLFWRQ Trigger: CTGTCTCCAGAAAAGGCAGCATTCAAACCTAGTACA...CTGACTAATGGATAACTGGGTCAAAGAGTCCTCACTGGCTAACCTACTTTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTGACTTCCAGAAAAGTCTTCAGAAAGATATCAAAAGCAGTGTAAAGGAGTCCTCTCACGTGCTTTaGGAACAATACAGGAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: HSDFQKSLQKDIKSSVKESSHVL*EQYRNS Trigger: GGAATTCCTGTATTGTTCCCAAAGCACGTGAGAGGA...CTCCTTTACACTGCTTTTGATATCTTTCTGAAGACTTTTCTGGAAGTCAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198799.2 |
||
| 3UTR-3UTR TCA 90 bp | CACACAGTCACACAGACTTACTTGAGGACAAAACAACAAACCACATACAATAATTACCCACATCAGGAATaGAATACAAGAGCCTTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: HTVTQTYLRTKQQTTYNNYPHQE*NTRALL Trigger: TAGCAAGGCTCTTGTATTTCATTCCTGATGTGGGTA...ATTATTGTATGTGGTTTGTTGTTTTGTCCTCAAGTAAGTCTGTGTGACTGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR TCA 90 bp | CACACAGTCACACAGACTTACTTGAGGACAAAACAACAAACCACATACAATAATGGTGGGCTTCCCCGCTaGTTATATAATTTATTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HTVTQTYLRTKQQTTYNNGGLPR*LYNLFF Trigger: GAAGAATAAATTATATAATCAGCGGGGAAGCCCACC...ATTATTGTATGTGGTTTGTTGTTTTGTCCTCAAGTAAGTCTGTGTGACTGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAATCATTGTACATAATCTTTCCGAGTTCAGGCCTTAGTGTTGTAAACGCAGGATTTTCCAGCATTTaGGAATCTATGAGGACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LKSLYIIFPSSGLSVVNAGFSSI*ESMRTV Trigger: AACAGTCCTCATAGATTCCCAAATGCTGGAAAATCC...TGCGTTTACAACACTAAGGCCTGAACTCGGAAAGATTATGTACAATGATTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128887.8 ENSMUST00000147244.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGTGTAAAGGAGGAGAAATGTATAAAAGCAGGTTATGGACTCTCTTTTAAAAATTATCCTCTCACGTaGTTTGGGAACAATACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSVKEEKCIKAGYGLSFKNYPLT*FGNNTG Trigger: TCCTGTATTGTTCCCAAAGCACGTGAGAGGATAATT...TTTAAAAGAGAGTCCATAACCTGCTTTTATACATTTCTCCTCCTTTACACTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198799.2 |
||
| 3UTR TCA 72 bp | ACCAAACCAGCACGAGAGGCTGCAGCAGCAGGTCCATaGGCTGGCCAGAACCTACTAGGCCTACATCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: TKPAREAAAAGP*AGQNLLGLHQL Trigger: TAGCTGATGTAGGCCTAGTAGGTTCTGGCCAGCTCATGGACCTGCTGCTGCAGCCTCTCGTGCTGGTTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| 3UTR CCA 72 bp | ACCAGCACGAGAGGCTGCAGCAGCAGGTCCATGAGCTaGCCAGAACCTACTAGGCCTACATCAGCTATGACT | + |
|
Preference number: 3 (lower is better) Translates to: TSTRGCSSRSMS*PEPTRPTSAMT Trigger: AGTCATAGCTGATGTAGGCCTAGTAGGTTCTGGCCAGCTCATGGACCTGCTGCTGCAGCCTCTCGTGCTGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| 3UTR CCA 72 bp | TACTCAAAACTCCTAGCTTCTCCTTCCCAAGGGGTGTaGGAGAGGCCCACACCACCACGCTTACCAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: YSKLLASPSQGV*ERPTPPRLPEL Trigger: AAGCTCTGGTAAGCGTGGTGGTGTGGGCCTCTCCCACACCCCTTGGGAAGGAGAAGCTAGGAGTTTTGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR GCA 72 bp | GCTGGAGAAGAAGGCTTGGAAGTTAAGAACCCTGGCTaGTCTTGCAGAGGACCTGGTTCTGATTTCCGACAC | + |
|
Preference number: 3 (lower is better) Translates to: AGEEGLEVKNPG*SCRGPGSDFRH Trigger: GTGTCGGAAATCAGAACCAGGTCCTCTGCAAGAGCAGCCAGGGTTCTTAACTTCCAAGCCTTCTTCTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAACCACCAAACCAGCACGAGAGGCTGCAGCAGCAGGTCCATGAGCTGGCCCTGTCTTCTTCTTTATaGAGTTCTCCTAGCACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LKPPNQHERLQQQVHELALSSSL*SSPSTW Trigger: CCAAGTGCTAGGAGAACTCAATAAAGAAGAAGACAG...GGCCAGCTCATGGACCTGCTGCTGCAGCCTCTCGTGCTGGTTTGGTGGTTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| 3UTR CCA 72 bp | AGTTCCAGGATATCTGACCCCCTCTTCTGGCTGTCATaGACACTTCATTCACACAGTCACACAGACTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: SSRISDPLFWLS*TLHSHSHTDLL Trigger: AAGTAAGTCTGTGTGACTGTGTGAATGAAGTGTCCATGACAGCCAGAAGAGGGGGTCAGATATCCTGGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CCA 72 bp | GAGAATTTCAGTTCCAGGATATCTGACCCCCTCTTCTaGCTGTCATGGACACTTCATTCACACAGTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: ENFSSRISDPLF*LSWTLHSHSHT Trigger: TGTGTGACTGTGTGAATGAAGTGTCCATGACAGCCAGAAGAGGGGGTCAGATATCCTGGAACTGAAATTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTATTAAAGAAAGGGGCTGGAGAAGAAGGCTTGGAAGTTAAGAACCCTGGCATTTCCGACACTTGCTaGGTGGCTTTCCACTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KVLKKGAGEEGLEVKNPGISDTC*VAFHCR Trigger: TCTACAGTGGAAAGCCACCAAGCAAGTGTCGGAAAT...GCCAGGGTTCTTAACTTCCAAGCCTTCTTCTCCAGCCCCTTTCTTTAATACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR GCA 72 bp | CCGCATGTGAGATCATTGATATTTGTCTTGCTGTCGTaGCTGGCTTCTTTGAACATCATGCTTTTCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PHVRSLIFVLLS*LASLNIMLFRL Trigger: GAGCCTGAAAAGCATGATGTTCAAAGAAGCCAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CCA 72 bp | AGTTGTCTGGTTCTCTCTAAATGCTTGAGGAACTTGTaGCCCATGCCTTTGTTCATATGCGCTCCTTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: SCLVLSKCLRNL*PMPLFICAPSI Trigger: GATAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126855.8 ENSMUST00000128887.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTTCCGACACTTGCTTGGTGGCTTTCCACTGTAGAGAATTTCAGTTCCAGGTCACACAGACTTACTaGAGGACAAAACAACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LISDTCLVAFHCREFQFQVTQTY*RTKQQT Trigger: GGTTTGTTGTTTTGTCCTCAAGTAAGTCTGTGTGAC...CTGGAACTGAAATTCTCTACAGTGGAAAGCCACCAAGCAAGTGTCGGAAATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR TCA 72 bp | CAACAAAAAGCAGTTGTCTGGTTCTCTCTAAATGCTTaGGGAACTTGTGGCCCATGCCTTTGTTCATATGCG | + |
|
Preference number: 3 (lower is better) Translates to: QQKAVVWFSLNA*GTCGPCLCSYA Trigger: CGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACTGCTTTTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCTAAGATTCCGCATGTGAGATCATTGATATTTGTCTTGCTGTCGTGCCTGTACGCTGTACTAGGTTaGAATGCTGCCTTTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSKIPHVRSLIFVLLSCLYAVLG*NAAFSG Trigger: TCCAGAAAAGGCAGCATTCAAACCTAGTACAGCGTA...CAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGGAATCTTAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTAAATGCTTGAGGAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCTAAATTTGTATGTAATTaGCCACCAAGGCCACCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSKCLRNLWPMPLFICAPKFVCN*PPRPPL Trigger: TAAAGGTGGCCTTGGTGGCAAATTACATACAAATTT...AGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126855.8 |
||
| 3UTR TCA 72 bp | CTCAGTAAGGAGGATTTTCCAGCATTTGGGAATCTATaGGGACTGTTCTCTTTAAAACCACCAAACCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSKEDFPAFGNL*GLFSLKPPNQH Trigger: GTGCTGGTTTGGTGGTTTTAAAGAGAACAGTCCTCATAGATTCCCAAATGCTGGAAAATCCTCCTTACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGAAGTATTATAGTTTCAAAGGCAGTCCTATATGGAGTTACAGAAGAAAGCTTGTGGCCCATGCCTTaGTTCATATGCGCTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VRSIIVSKAVLYGVTEESLWPMP*FICAPS Trigger: AGAAGGAGCGCATATGAACAAAGGCATGGGCCACAA...GCTTTCTTCTGTAACTCCATATAGGACTGCCTTTGAAACTATAATACTTCTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR TCA 72 bp | TTTATAATGGCTGTTCCTAACAACAGCTTATGTACATaGCCTCTAGCTTTCACACACCGTTGCCAGTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: FIMAVPNNSLCT*PLAFTHRCQLS Trigger: GCTTAACTGGCAACGGTGTGTGAAAGCTAGAGGTCATGTACATAAGCTGTTGTTAGGAACAGCCATTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198799.2 |
||
| 3UTR GCA 72 bp | TCAACAACAAAAAGCAGTTGTCTGGTTCTCTCTAAATaGTTGAGGAACTTGTGGCCCATGCCTTTGTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: STTKSSCLVLSK*LRNLWPMPLFI Trigger: TATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACTGCTTTTTGTTGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTATTAAAGAAAGGGGCTGGAGAAGAAGGCTTGGAAGTTAAGAACCCTGGCTTAGAAGAAAGAGTATaGCGTCAATACGCTGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: KVLKKGAGEEGLEVKNPGLEERV*RQYAVL Trigger: TAGTACAGCGTATTGACGCAATACTCTTTCTTCTAA...GCCAGGGTTCTTAACTTCCAAGCCTTCTTCTCCAGCCCCTTTCTTTAATACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAACACACATTCTGACTTCCAGAAAAGTCTTCAGAAAGATATCAAAAGCAATCCTCTCACGTGCTTaGGGAACAATACAGGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: QQTHILTSRKVFRKISKAILSRA*GTIQEF Trigger: GAATTCCTGTATTGTTCCCAAAGCACGTGAGAGGAT...TGCTTTTGATATCTTTCTGAAGACTTTTCTGGAAGTCAGAATGTGTGTTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198799.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCCAAGGGGTGTGGGAGAGGCCCACACCACCACGCTTACCAGAGCTTACCGCTTCCTCCCTTGGTaGAGATTCTCAGGTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPRGVGEAHTTTLTRAYRFLPW*RFSGYQ Trigger: TTGATAACCTGAGAATCTTCACCAAGGGAGGAAGCG...GTAAGCTCTGGTAAGCGTGGTGGTGTGGGCCTCTCCCACACCCCTTGGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCCAAGGGGTGTGGGAGAGGCCCACACCACCACGCTTACCAGAGCTTACGCGCATCACTTTCTTTaGCATCCTGTTCATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFPRGVGEAHTTTLTRAYAHHFL*HPVHPV Trigger: CACTGGATGAACAGGATGGCAAAGAAAGTGATGCGC...GTAAGCTCTGGTAAGCGTGGTGGTGTGGGCCTCTCCCACACCCCTTGGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCCAAGGGGTGTGGGAGAGGCCCACACCACCACGCTTACCAGAGCTTACTGTCTTCTTCTTTATTaGGTTCTCCTAGCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPRGVGEAHTTTLTRAYCLLLY*VLLALG Trigger: GCCAAGTGCTAGGAGAACTCAATAAAGAAGAAGACA...GTAAGCTCTGGTAAGCGTGGTGGTGTGGGCCTCTCCCACACCCCTTGGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CAA 72 bp | ACCGCAGGCAGGTCCCCAATTATCCTCTCACGTGCTTaGGGAACAATACAGGAATTCCCTAAAGCTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: TAGRSPIILSRA*GTIQEFPKAGP Trigger: GGGTCCAGCTTTAGGGAATTCCTGTATTGTTCCCAAAGCACGTGAGAGGATAATTGGGGACCTGCCTGCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198799.2 |
||
| CDS-3UTR GCA 90 bp | TCTAAATGCTTGAGGAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCTTCTACCAGCACGAGAGGCTaGAGCAGCAGGTCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKCLRNLWPMPLFICAPSTSTRG*SSRSMS Trigger: GCTCATGGACCTGCTGCTGCAGCCTCTCGTGCTGGT...AGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| CDS-3UTR TCA 90 bp | CCATGCCTTTGTTCATATGCGCTCCTTCTATCAAACCTGGGAGATCAGCTACTGCGCTTCCTCCCTTGGTaGAGATTCTCAGGTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCLCSYALLLSNLGDQLLRFLPW*RFSGYQ Trigger: TTGATAACCTGAGAATCTTCACCAAGGGAGGAAGCG...CAGTAGCTGATCTCCCAGGTTTGATAGAAGGAGCGCATATGAACAAAGGCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126855.8 |
||
| CDS-3UTR TCA 90 bp | CCGTTTTCATCAGTTACTGAGATACCCACAGGAGCAGGCACTTCACAGTCCTTTCGCTTCCTCCCTTGGTaGAGATTCTCAGGTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PFSSVTEIPTGAGTSQSFRFLPW*RFSGYQ Trigger: TTGATAACCTGAGAATCTTCACCAAGGGAGGAAGCG...AAAGGACTGTGAAGTGCCTGCTCCTGTGGGTATCTCAGTAACTGATGAAAACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTAAGATTCCGCATGTGAGATCATTGATATTTGTCTTGCTGTCGTGCCTGTTTCCCTTGGAGCCCTaGAGTGCGCTAACTCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKIPHVRSLIFVLLSCLFPLEP*SALTRL Trigger: CAGTCGAGTTAGCGCACTGCAGGGCTCCAAGGGAAA...CAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGGAATCTTAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTTGAGGAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCTTCTATCAAGTTTTCATCAGTTACTaGGATACCCACAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLEELVAHAFVHMRSFYQVFISY*DTHRSR Trigger: CCTGCTCCTGTGGGTATCTCAGTAACTGATGAAAAC...TTGATAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| CDS-3UTR CCA 90 bp | GAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCTTCTATCAAACCTGGGAGAAGGTCATATTTTTATaGGCCACAACCCAGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELVAHAFVHMRSFYQTWEKVIFL*ATTQTS Trigger: TGACGTCTGGGTTGTGGCCCATAAAAATATGACCTT...CTCCCAGGTTTGATAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126855.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGACTGTTCTCTTTAAAACCACCAAACCAGCACGAGAGGCTGCAGCAGCAAAGGTCATATTTTTATaGGCCACAACCCAGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MRTVLFKTTKPAREAAAAKVIFL*ATTQTS Trigger: TGACGTCTGGGTTGTGGCCCATAAAAATATGACCTT...TGCTGCTGCAGCCTCTCGTGCTGGTTTGGTGGTTTTAAAGAGAACAGTCCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147244.2 |
||
| CDS-3UTR CCA 90 bp | GGCACAGCAAACACACATTCTGACTTCCAGAAAAGTCTTCAGAAAGATATCAAACGAAGACACCAAAGCTaGGGAGACCCCCGTCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTANTHSDFQKSLQKDIKRRHQS*GDPRHE Trigger: TTCGTGACGGGGGTCTCCCCAGCTTTGGTGTCTTCG...TTTGATATCTTTCTGAAGACTTTTCTGGAAGTCAGAATGTGTGTTTGCTGTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198799.2 |
||
| 3UTR CAA 72 bp | CTCTCTAAATGCTTGAGGAACTTGTGGCCCATGCCTTaGTTCATATGCGCTCCTTCTATCAAACCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKCLRNLWPMP*FICAPSIKPGR Trigger: TCTCCCAGGTTTGATAGAAGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126855.8 ENSMUST00000128887.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTATTAAAGAAAGGGGCTGGAGAAGAAGGCTTGGAAGTTAAGAACCCTGGCGTTTTCATCAGTTACTaGGATACCCACAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVLKKGAGEEGLEVKNPGVFISY*DTHRSR Trigger: CCTGCTCCTGTGGGTATCTCAGTAACTGATGAAAAC...GCCAGGGTTCTTAACTTCCAAGCCTTCTTCTCCAGCCCCTTTCTTTAATACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR TCA 90 bp | CTGATTTCCGACACTTGCTTGGTGGCTTTCCACTGTAGAGAATTTCAGTTCCAGGGCCTACATCAGCTATaGCTTTTAGGTCAAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LISDTCLVAFHCREFQFQGLHQL*LLGQGE Trigger: TTCACCTTGACCTAAAAGTCATAGCTGATGTAGGCC...CTGGAACTGAAATTCTCTACAGTGGAAAGCCACCAAGCAAGTGTCGGAAATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGTGTAGCATGGGAAACCCGACTCAGTAAGGAGGATTTTCCAGCATTTGGCCTACATCAGCTATaGCTTTTAGGTCAAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITGVAWETRLSKEDFPAFGLHQL*LLGQGE Trigger: TTCACCTTGACCTAAAAGTCATAGCTGATGTAGGCC...AAATGCTGGAAAATCCTCCTTACTGAGTCGGGTTTCCCATGCTACACCTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCTAAGATTCCGCATGTGAGATCATTGATATTTGTCTTGCTGTCGTGCCTGGAGATGGGAACGATATaGTGGAACTCTAGAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSKIPHVRSLIFVLLSCLEMGTI*WNSRAF Trigger: GAAGGCTCTAGAGTTCCAGCATATCGTTCCCATCTC...CAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGGAATCTTAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAAAGGCAGTCCTATATGGAGTTACAGAAGAAAGCTGAAACCCAGAAATATTTTCCCTTGGAGCCCTaGAGTGCGCTAACTCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FQRQSYMELQKKAETQKYFPLEP*SALTRL Trigger: CAGTCGAGTTAGCGCACTGCAGGGCTCCAAGGGAAA...ATATTTCTGGGTTTCAGCTTTCTTCTGTAACTCCATATAGGACTGCCTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTTCCGACACTTGCTTGGTGGCTTTCCACTGTAGAGAATTTCAGTTCCAGAAGGTCATATTTTTATaGGCCACAACCCAGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LISDTCLVAFHCREFQFQKVIFL*ATTQTS Trigger: TGACGTCTGGGTTGTGGCCCATAAAAATATGACCTT...CTGGAACTGAAATTCTCTACAGTGGAAAGCCACCAAGCAAGTGTCGGAAATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAAATGCTTGAGGAACTTGTGGCCCATGCCTTTGTTCATATGCGCTCCTACAAACACTAGCACTTaGCCGTTTTCATCAGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LSKCLRNLWPMPLFICAPTNTST*PFSSVT Trigger: AGTAACTGATGAAAACGGCCAAGTGCTAGTGTTTGT...AGGAGCGCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCTAAGATTCCGCATGTGAGATCATTGATATTTGTCTTGCTGTCGTGCCTGTGCTTCATCAGTTCCTaGAGTTTAACTTGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSKIPHVRSLIFVLLSCLCFISS*SLTWAS Trigger: GGATGCCCAAGTTAAACTTCAGGAACTGATGAAGCA...CAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGGAATCTTAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR TCA 90 bp | AATCAAAGTAGGTTAGCCAGTGAGGACTCTTTGACCCAGTTATCCATTAGTCAGTGGAACTCTGCAAATTaGGCAACTGTTTGCTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: NQSRLASEDSLTQLSISQWNSAN*ATVCSD Trigger: ATCGGAGCAAACAGTTGCTCAATTTGCAGAGTTCCA...CTGACTAATGGATAACTGGGTCAAAGAGTCCTCACTGGCTAACCTACTTTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCTAAGATTCCGCATGTGAGATCATTGATATTTGTCTTGCTGTCGTGCCTGTGCTTGAGGAACTTGTaGCCCATGCCTTTGTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSKIPHVRSLIFVLLSCLCLRNL*PMPLFI Trigger: TATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCA...CAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGGAATCTTAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CAA 72 bp | TCATTGATATTTGTCTTGCTGTCGTGCCTGGCTTCTTaGAACATCATGCTTTTCAGGCTCGTCCACGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLIFVLLSCLAS*NIMLFRLVHVL Trigger: TAAAACGTGGACGAGCCTGAAAAGCATGATGTTCAAAGAAGCCAGGCACGACAGCAAGACAAATATCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CAA 72 bp | CTTGAAAATCAAAGTAGGTTAGCCAGTGAGGACTCTTaGACCCAGTTATCCATTAGTCAGACTGTGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LENQSRLASEDS*TQLSISQTVRS Trigger: TGACCTCACAGTCTGACTAATGGATAACTGGGTCAAAGAGTCCTCACTGGCTAACCTACTTTGATTTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CAA 72 bp | ACAACAAAAAGCAGTTGTCTGGTTCTCTCTAAATGCTaGAGGAACTTGTGGCCCATGCCTTTGTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: TTKSSCLVLSKC*RNLWPMPLFIC Trigger: GCATATGAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACTGCTTTTTGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCTCGTCCACGTTTTAAACATGATTTTCTGATCCTTAGAAGAAAGAGTGGAACTTGTGGCCCATaGCTTTGTTCATATGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQARPRFKHDFLILRRKSGTCGP*LCSYAL Trigger: GAGCGCATATGAACAAAGGCATGGGCCACAAGTTCC...ACTCTTTCTTCTAAGGATCAGAAAATCATGTTTAAAACGTGGACGAGCCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR GCA 90 bp | CACACAGTCACACAGACTTACTTGAGGACAAAACAACAAACCACATACAATAATACAGCTCTTCAACTCTaGAATGCCTTCCCCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HTVTQTYLRTKQQTTYNNTALQL*NAFPSD Trigger: GTCACTGGGGAAGGCATTGCAGAGTTGAAGAGCTGT...ATTATTGTATGTGGTTTGTTGTTTTGTCCTCAAGTAAGTCTGTGTGACTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCTAAGATTCCGCATGTGAGATCATTGATATTTGTCTTGCTGTCGTGCCTGAGTTCTCCTAGCACTTaGCCGTTTTCATCAGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LSKIPHVRSLIFVLLSCLSSPST*PFSSVT Trigger: AGTAACTGATGAAAACGGCCAAGTGCTAGGAGAACT...CAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGGAATCTTAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CAA 72 bp | TCTAAGATTCCGCATGTGAGATCATTGATATTTGTCTaGCTGTCGTGCCTGGCTTCTTTGAACATCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKIPHVRSLIFV*LSCLASLNIML Trigger: AAGCATGATGTTCAAAGAAGCCAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGGAATCTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| 3UTR CAA 72 bp | CAGATTTGTCTTTCTAAGATTCCGCATGTGAGATCATaGATATTTGTCTTGCTGTCGTGCCTGGCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QICLSKIPHVRS*IFVLLSCLASL Trigger: CAAAGAAGCCAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGGAATCTTAGAAAGACAAATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR TCA 90 bp | CACACAGTCACACAGACTTACTTGAGGACAAAACAACAAACCACATACAATAATTTCTCTCTAAATGCTTaGGGAACTTGTGGCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: HTVTQTYLRTKQQTTYNNFSLNA*GTCGPC Trigger: GCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAA...ATTATTGTATGTGGTTTGTTGTTTTGTCCTCAAGTAAGTCTGTGTGACTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCTCGTCCACGTTTTAAACATGATTTTCTGATCCTTAGAAGAAAGAGTCTGGTTCTCTCTAAATaGTTGAGGAACTTGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQARPRFKHDFLILRRKSLVLSK*LRNLWP Trigger: GGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAG...ACTCTTTCTTCTAAGGATCAGAAAATCATGTTTAAAACGTGGACGAGCCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR TCA 90 bp | AATCAAAGTAGGTTAGCCAGTGAGGACTCTTTGACCCAGTTATCCATTAGTCAGTGGGAGATCAGCTACTaGAATCTGTTTGAAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: NQSRLASEDSLTQLSISQWEISY*NLFEII Trigger: AATGATTTCAAACAGATTTCAGTAGCTGATCTCCCA...CTGACTAATGGATAACTGGGTCAAAGAGTCCTCACTGGCTAACCTACTTTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCTCGTCCACGTTTTAAACATGATTTTCTGATCCTTAGAAGAAAGAGTATCCTGTTCATCCAGTaGTTTCCTTATACAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQARPRFKHDFLILRRKSILFIQ*FPYTAL Trigger: AAGAGCTGTATAAGGAAAGCACTGGATGAACAGGAT...ACTCTTTCTTCTAAGGATCAGAAAATCATGTTTAAAACGTGGACGAGCCTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGCTCGTCCACGTTTTAAACATGATTTTCTGATCCTTAGAAGAAAGAGTAAAGGCAGTCCTATATaGAGTTACAGAAGAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQARPRFKHDFLILRRKSKGSPI*SYRRKL Trigger: CAGCTTTCTTCTGTAACTCCATATAGGACTGCCTTT...ACTCTTTCTTCTAAGGATCAGAAAATCATGTTTAAAACGTGGACGAGCCTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS GCA 90 bp | CACAGGAGCAGGCACTTCACAGTCCTTTCCCTTGGAGCCCTGCAGTaGGCTAACTCGACTGTTTGCTCCTCCTCCGGCCACAAACCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HRSRHFTVLSLGALQ*ANSTVCSSSGHKPF Trigger: AAACGGTTTGTGGCCGGAGGAGGAGCAAACAGTCGAGTTAGCGCACTGCAGGGCTCCAAGGGAAAGGACTGTGAAGTGCCTGCTCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115441.9 ENSMUST00000119521.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCCAAGGGGTGTGGGAGAGGCCCACACCACCACGCTTACCAGAGCTTACGTTCTCTCTAAATGCTaGAGGAACTTGTGGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SFPRGVGEAHTTTLTRAYVLSKC*RNLWPM Trigger: CATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAAC...GTAAGCTCTGGTAAGCGTGGTGGTGTGGGCCTCTCCCACACCCCTTGGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCCAAGGGGTGTGGGAGAGGCCCACACCACCACGCTTACCAGAGCTTACAGGATTTTCCAGCATTaGGGAATCCTACTAGGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SFPRGVGEAHTTTLTRAYRIFQH*GILLGL Trigger: TAGGCCTAGTAGGATTCCCAAATGCTGGAAAATCCT...GTAAGCTCTGGTAAGCGTGGTGGTGTGGGCCTCTCCCACACCCCTTGGGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS GCA 90 bp | ACAGTCCTTTCCCTTGGAGCCCTGCAGTGCGCTAACTCGACTGTTTaGTCCTCCTCCGGCCACAAACCGTTTCTGAGGATATTTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVLSLGALQCANSTV*SSSGHKPFLRIFVF Trigger: AAAAACAAATATCCTCAGAAACGGTTTGTGGCCGGAGGAGGAGCAAACAGTCGAGTTAGCGCACTGCAGGGCTCCAAGGGAAAGGACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115441.9 ENSMUST00000119521.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCCAAGGGGTGTGGGAGAGGCCCACACCACCACGCTTACCAGAGCTTACGTCTGTAGTTCTTCTTaGTACAACTCCAACTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFPRGVGEAHTTTLTRAYVCSSS*YNSNSF Trigger: AAAAGAGTTGGAGTTGTACAAAGAAGAACTACAGAC...GTAAGCTCTGGTAAGCGTGGTGGTGTGGGCCTCTCCCACACCCCTTGGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGCAGTTGTCTGGTTCTCTCTAAATGCTTGAGGAACTTGTGGCCCATGCCTTCACAGTCCTTTCCCTaGGAGCCCTGCAGTGCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KSSCLVLSKCLRNLWPMPSQSFP*EPCSAL Trigger: TAGCGCACTGCAGGGCTCCAAGGGAAAGGACTGTGA...AGGCATGGGCCACAAGTTCCTCAAGCATTTAGAGAGAACCAGACAACTGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| CDS TCA 90 bp | GTGCTTTCCTTATACAGCTCTTCAACTCTGCAATGCCTTCCCCAGTaGCTGTTGAGATGGGAACGATATGCTGGAACTCTAGAGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLSLYSSSTLQCLPQ*LLRWERYAGTLEPS Trigger: AGAAGGCTCTAGAGTTCCAGCATATCGTTCCCATCTCAACAGTCACTGGGGAAGGCATTGCAGAGTTGAAGAGCTGTATAAGGAAAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS GCA 90 bp | TTTGCTCCGATGCGCATCACTTTCTTTGCCATCCTGTTCATCCAGTaGTTTCCTTATACAGCTCTTCAACTCTGCAATGCCTTCCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FAPMRITFFAILFIQ*FPYTALQLCNAFPS Trigger: ACTGGGGAAGGCATTGCAGAGTTGAAGAGCTGTATAAGGAAAGCACTGGATGAACAGGATGGCAAAGAAAGTGATGCGCATCGGAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | CTGATTTCCGACACTTGCTTGGTGGCTTTCCACTGTAGAGAATTTCAGTTCCAGTTCCTGAAGTTTAACTaGGGCATCCGGCAAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LISDTCLVAFHCREFQFQFLKFN*GIRQVH Trigger: ATGGACTTGCCGGATGCCCAAGTTAAACTTCAGGAA...CTGGAACTGAAATTCTCTACAGTGGAAAGCCACCAAGCAAGTGTCGGAAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCTAAGATTCCGCATGTGAGATCATTGATATTTGTCTTGCTGTCGTGCCTGTTGTGGCCCATGCCTTaGTTCATATGCGCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSKIPHVRSLIFVLLSCLLWPMP*FICAPS Trigger: AGAAGGAGCGCATATGAACAAAGGCATGGGCCACAA...CAGGCACGACAGCAAGACAAATATCAATGATCTCACATGCGGAATCTTAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | CACACAGTCACACAGACTTACTTGAGGACAAAACAACAAACCACATACAATAATTCACAGTCCTTTCCCTaGGAGCCCTGCAGTGCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: HTVTQTYLRTKQQTTYNNSQSFP*EPCSAL Trigger: TAGCGCACTGCAGGGCTCCAAGGGAAAGGACTGTGA...ATTATTGTATGTGGTTTGTTGTTTTGTCCTCAAGTAAGTCTGTGTGACTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS GCA 90 bp | AACTCTGCAATGCCTTCCCCAGTGACTGTTGAGATGGGAACGATATaGTGGAACTCTAGAGCCTTCTCTGGAATCATCTTTGTTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NSAMPSPVTVEMGTI*WNSRAFSGIIFVSN Trigger: ATTTGAAACAAAGATGATTCCAGAGAAGGCTCTAGAGTTCCAGCATATCGTTCCCATCTCAACAGTCACTGGGGAAGGCATTGCAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | AATCAAAGTAGGTTAGCCAGTGAGGACTCTTTGACCCAGTTATCCATTAGTCAGTGCGCATCACTTTCTTaGCCATCCTGTTCATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NQSRLASEDSLTQLSISQCASLS*PSCSSS Trigger: ACTGGATGAACAGGATGGCAAAGAAAGTGATGCGCA...CTGACTAATGGATAACTGGGTCAAAGAGTCCTCACTGGCTAACCTACTTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS TCA 90 bp | AGGATTTTCCAGCATTTGGGAATCCTACTAGGCCTACATCAGCTATaGCTTTTAGGTCAAGGTGAACTATGCGCTTCTGACCTTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RIFQHLGILLGLHQL*LLGQGELCASDLSK Trigger: CTTTGAAAGGTCAGAAGCGCATAGTTCACCTTGACCTAAAAGTCATAGCTGATGTAGGCCTAGTAGGATTCCCAAATGCTGGAAAATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS CCA 90 bp | TCTGCAATGCCTTCCCCAGTGACTGTTGAGATGGGAACGATATGCTaGAACTCTAGAGCCTTCTCTGGAATCATCTTTGTTTCAAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: SAMPSPVTVEMGTIC*NSRAFSGIIFVSNK Trigger: TTTATTTGAAACAAAGATGATTCCAGAGAAGGCTCTAGAGTTCCAGCATATCGTTCCCATCTCAACAGTCACTGGGGAAGGCATTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS CCA 90 bp | TTATTGAGTTCTCCTTTAAGAGGAAAGACAACAAACACTAGCACTTaGCCGTTTTCATCAGTTACTGAGATACCCACAGGAGCAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLSSPLRGKTTNTST*PFSSVTEIPTGAGT Trigger: AGTGCCTGCTCCTGTGGGTATCTCAGTAACTGATGAAAACGGCCAAGTGCTAGTGTTTGTTGTCTTTCCTCTTAAAGGAGAACTCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| CDS-3UTR CAA 90 bp | AATCAAAGTAGGTTAGCCAGTGAGGACTCTTTGACCCAGTTATCCATTAGTCAGCTGTCTTCTTCTTTATaGAGTTCTCCTAGCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NQSRLASEDSLTQLSISQLSSSL*SSPSTW Trigger: CCAAGTGCTAGGAGAACTCAATAAAGAAGAAGACAG...CTGACTAATGGATAACTGGGTCAAAGAGTCCTCACTGGCTAACCTACTTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | CACACAGTCACACAGACTTACTTGAGGACAAAACAACAAACCACATACAATAATAAATGCTTGAGGAACTaGTGGCCCATGCCTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HTVTQTYLRTKQQTTYNNKCLRN*WPMPLF Trigger: GAACAAAGGCATGGGCCACAAGTTCCTCAAGCATTT...ATTATTGTATGTGGTTTGTTGTTTTGTCCTCAAGTAAGTCTGTGTGACTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | CACACAGTCACACAGACTTACTTGAGGACAAAACAACAAACCACATACAATAATCTGGAACTCTGCAAATaGAGCAACTGTTTGCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HTVTQTYLRTKQQTTYNNLELCK*SNCLLR Trigger: TCGGAGCAAACAGTTGCTCAATTTGCAGAGTTCCAG...ATTATTGTATGTGGTTTGTTGTTTTGTCCTCAAGTAAGTCTGTGTGACTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | AATCAAAGTAGGTTAGCCAGTGAGGACTCTTTGACCCAGTTATCCATTAGTCAGAAATTTGTATGTAATTaGCCACCAAGGCCACCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: NQSRLASEDSLTQLSISQKFVCN*PPRPPL Trigger: TAAAGGTGGCCTTGGTGGCAAATTACATACAAATTT...CTGACTAATGGATAACTGGGTCAAAGAGTCCTCACTGGCTAACCTACTTTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115441.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTCAAAGGCAGTCCTATATGGAGTTACAGAAGAAAGCTGAAACCCAGAAATAAATTTGTATGTAATTaGCCACCAAGGCCACCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SFKGSPIWSYRRKLKPRNKFVCN*PPRPPL Trigger: TAAAGGTGGCCTTGGTGGCAAATTACATACAAATTT...ATTTCTGGGTTTCAGCTTTCTTCTGTAACTCCATATAGGACTGCCTTTGAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||
| CDS GCA 72 bp | GGAGCAGGCACTTCACAGTCCTTTCCCTTGGAGCCCTaGAGTGCGCTAACTCGACTGTTTGCTCCTCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GAGTSQSFPLEP*SALTRLFAPPP Trigger: CGGAGGAGGAGCAAACAGTCGAGTTAGCGCACTGCAGGGCTCCAAGGGAAAGGACTGTGAAGTGCCTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115441.9 ENSMUST00000119521.8 ENSMUST00000128887.8 |
||
| CDS CCA 72 bp | GACAACCCAGGAGGAGAGCGGCGAAGACACCAAAGCTaGGGAGACCCCCGTCACGAACCTTTCTCAACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: DNPGGERRRHQS*GDPRHEPFSTK Trigger: CTTTGTTGAGAAAGGTTCGTGACGGGGGTCTCCCCAGCTTTGGTGTCTTCGCCGCTCTCCTCCTGGGTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198799.2 |
||
| CDS CAA 90 bp | GTTACTGAGATACCCACAGGAGCAGGCACTTCACAGTCCTTTCCCTaGGAGCCCTGCAGTGCGCTAACTCGACTGTTTGCTCCTCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VTEIPTGAGTSQSFP*EPCSALTRLFAPPP Trigger: CGGAGGAGGAGCAAACAGTCGAGTTAGCGCACTGCAGGGCTCCAAGGGAAAGGACTGTGAAGTGCCTGCTCCTGTGGGTATCTCAGTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115441.9 ENSMUST00000119521.8 ENSMUST00000128887.8 |
||
| CDS GCA 72 bp | TCCCTTGGAGCCCTGCAGTGCGCTAACTCGACTGTTTaGTCCTCCTCCGGCCACAAACCGTTTCTGAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: SLGALQCANSTV*SSSGHKPFLRI Trigger: TATCCTCAGAAACGGTTTGTGGCCGGAGGAGGAGCAAACAGTCGAGTTAGCGCACTGCAGGGCTCCAAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115441.9 ENSMUST00000119521.8 |
||
| CDS CAA 72 bp | ATACCCACAGGAGCAGGCACTTCACAGTCCTTTCCCTaGGAGCCCTGCAGTGCGCTAACTCGACTGTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IPTGAGTSQSFP*EPCSALTRLFA Trigger: AGCAAACAGTCGAGTTAGCGCACTGCAGGGCTCCAAGGGAAAGGACTGTGAAGTGCCTGCTCCTGTGGGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115441.9 ENSMUST00000119521.8 ENSMUST00000128887.8 |
||
| CDS CAA 72 bp | GGGAAACCCGACTCAGTAAGGAGGATTTTCCAGCATTaGGGAATCGACTGTTTGCTCCTCCTCCGGCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: GKPDSVRRIFQH*GIDCLLLLRPQ Trigger: TTGTGGCCGGAGGAGGAGCAAACAGTCGATTCCCAAATGCTGGAAAATCCTCCTTACTGAGTCGGGTTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088842.11 |
||
| CDS GCA 72 bp | ATGCCTTCCCCAGTGACTGTTGAGATGGGAACGATATaGTGGAACTCTAGAGCCTTCTCTGGAATCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MPSPVTVEMGTI*WNSRAFSGIIF Trigger: AAAGATGATTCCAGAGAAGGCTCTAGAGTTCCAGCATATCGTTCCCATCTCAACAGTCACTGGGGAAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS GCA 72 bp | CTGGAACTCTGCAAATTGAGCAACTGTTTGCTCCGATaGGCATCACTTTCTTTGCCATCCTGTTCATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LELCKLSNCLLR*ASLSLPSCSSS Trigger: ACTGGATGAACAGGATGGCAAAGAAAGTGATGCGCATCGGAGCAAACAGTTGCTCAATTTGCAGAGTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS CCA 72 bp | CCTTCCCCAGTGACTGTTGAGATGGGAACGATATGCTaGAACTCTAGAGCCTTCTCTGGAATCATCTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PSPVTVEMGTIC*NSRAFSGIIFV Trigger: AACAAAGATGATTCCAGAGAAGGCTCTAGAGTTCCAGCATATCGTTCCCATCTCAACAGTCACTGGGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS CAA 90 bp | CTCTGCAAATTGAGCAACTGTTTGCTCCGATGCGCATCACTTTCTTaGCCATCCTGTTCATCCAGTGCTTTCCTTATACAGCTCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LCKLSNCLLRCASLS*PSCSSSAFLIQLFN Trigger: GTTGAAGAGCTGTATAAGGAAAGCACTGGATGAACAGGATGGCAAAGAAAGTGATGCGCATCGGAGCAAACAGTTGCTCAATTTGCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS TCA 72 bp | TTATACAGCTCTTCAACTCTGCAATGCCTTCCCCAGTaGCTGTTGAGATGGGAACGATATGCTGGAACTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LYSSSTLQCLPQ*LLRWERYAGTL Trigger: TAGAGTTCCAGCATATCGTTCCCATCTCAACAGTCACTGGGGAAGGCATTGCAGAGTTGAAGAGCTGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS GCA 72 bp | ATGCGCATCACTTTCTTTGCCATCCTGTTCATCCAGTaGTTTCCTTATACAGCTCTTCAACTCTGCAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: MRITFFAILFIQ*FPYTALQLCNA Trigger: GGCATTGCAGAGTTGAAGAGCTGTATAAGGAAAGCACTGGATGAACAGGATGGCAAAGAAAGTGATGCGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS CAA 72 bp | TTGAGCAACTGTTTGCTCCGATGCGCATCACTTTCTTaGCCATCCTGTTCATCCAGTGCTTTCCTTATACAG | + |
|
Preference number: 6 (lower is better) Translates to: LSNCLLRCASLS*PSCSSSAFLIQ Trigger: CTGTATAAGGAAAGCACTGGATGAACAGGATGGCAAAGAAAGTGATGCGCATCGGAGCAAACAGTTGCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088842.11 ENSMUST00000115441.9 |
||
| CDS CAA 90 bp | CCACCAAGGCCACCTTTAGCAACCAGAACTCTGTCTTCTTCTTTATaGAGTTCTCCTTTAAGAGGAAAGACAACAAACACTAGCACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPRPPLATRTLSSSL*SSPLRGKTTNTSTW Trigger: CCAAGTGCTAGTGTTTGTTGTCTTTCCTCTTAAAGGAGAACTCAATAAAGAAGAAGACAGAGTTCTGGTTGCTAAAGGTGGCCTTGGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128887.8 |
||