Pregenerated sensors for GTF3C5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026816Ensembl transcript IDs: ENSMUST00000028157.9, ENSMUST00000113889.9, ENSMUST00000139553.2
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGGCACAGAGGCCACACAGAGACACAAGGCAATGGCCCATCTCTaGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: QGTEATQRHKAMAHL*RSTLQEVALLLWGL Trigger: TAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGAGATGGGCCATTGCCTTGTGTCTCTGTGTGGCCTCTGTGCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CCA 90 bp | ACCAGGCTGTTCAAGGCACAGAGGCCACACAGAGACACAAGGCAATaGCCCATCTCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TRLFKAQRPHRDTRQ*PISGAAPFRKWRCC Trigger: GCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGAGATGGGCCATTGCCTTGTGTCTCTGTGTGGCCTCTGTGCCTTGAACAGCCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR TCA 90 bp | AAGCAGCAGGAAGCAGGGTCAGCGGGGACACAGGGTCGGTCTGTCTaGTTCCATGCAAGACTGGGAAGTTCCCAGGAGTGCTCACTTGAC | + |
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Preference number: 1 (lower is better) Translates to: KQQEAGSAGTQGRSV*FHARLGSSQECSLD Trigger: GTCAAGTGAGCACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTCCCCGCTGACCCTGCTTCCTGCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR TCA 90 bp | AGCCTTTTGGAAGAGCTACTTCCTGCCTCAGGGCTGAGCATTCTTTaGAGCAGCAGGAAGCAGGGTCAGCGGGGACACAGGGTCGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: SLLEELLPASGLSIL*SSRKQGQRGHRVGL Trigger: CAGACCGACCCTGTGTCCCCGCTGACCCTGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGAAGTAGCTCTTCCAAAAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CCA 90 bp | GGGCCCTCACTCAGAACCTCCTCACATCCAGAGTCAAAGCATTCCTaGGTACATGGGATCAGAACCCTGGTCTCCTCCCCAAGAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: GPSLRTSSHPESKHS*VHGIRTLVSSPRTR Trigger: CCTGGTTCTTGGGGAGGAGACCAGGGTTCTGATCCCATGTACCCAGGAATGCTTTGACTCTGGATGTGAGGAGGTTCTGAGTGAGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CCA 90 bp | GATGGGCAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTaGCAGTCACCAGGAAAGAAGTCCTATGGGGACAGGCAAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: DGQQLEVRKRPAEAS*QSPGKKSYGDRQGW Trigger: CCAGCCTTGCCTGTCCCCATAGGACTTCTTTCCTGGTGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTGCCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR TCA 90 bp | TCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTGTaGCTTGACTGTGTGCACCAGGCTGTTCAAGGCACAGAGGCCACA | + |
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Preference number: 1 (lower is better) Translates to: SSISAGSRHLALDLL*LDCVHQAVQGTEAT Trigger: TGTGGCCTCTGTGCCTTGAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR TCA 90 bp | CTCTTCTGGCTTTCACAATCACCTGGATACACAACAGAGCAGGGATaGGCCCAGCCATGGCCTGACACATTAGGACGACTTCAGAAACCC | + |
|
Preference number: 1 (lower is better) Translates to: LFWLSQSPGYTTEQG*AQPWPDTLGRLQKP Trigger: GGGTTTCTGAAGTCGTCCTAATGTGTCAGGCCATGGCTGGGCTCATCCCTGCTCTGTTGTGTATCCAGGTGATTGTGAAAGCCAGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
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| 3UTR GCA 90 bp | ATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTaGTGTGACTTGACTGTGTGCACCAGGCTGTTCAAGGCACAGAGG | + |
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Preference number: 1 (lower is better) Translates to: MDLQSRLARGIWLWI*CDLTVCTRLFKAQR Trigger: CCTCTGTGCCTTGAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CCA 90 bp | CAAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTaGATTTGCTGTGACTTGACTGTGTGCACCAGGCTGTTCAAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: QTMDLQSRLARGIWL*ICCDLTVCTRLFKA Trigger: TGCCTTGAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CCA 90 bp | CCAAATCAAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTaGCTTTGGATTTGCTGTGACTTGACTGTGTGCACCAGGCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: PNQTMDLQSRLARGI*LWICCDLTVCTRLF Trigger: GAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTTGATTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR TCA 90 bp | ATCACCTGGATACACAACAGAGCAGGGATGAGCCCAGCCATGGCCTaGCACATTAGGACGACTTCAGAAACCCAAGAAAAATGTAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: ITWIHNRAGMSPAMA*HIRTTSETQEKCKN Trigger: ATTCTTACATTTTTCTTGGGTTTCTGAAGTCGTCCTAATGTGTCAGGCCATGGCTGGGCTCATCCCTGCTCTGTTGTGTATCCAGGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCCAACTGTCCCATCATaGCTCGCCAGCATGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: AQHPSGSGAAALGLTPRDPTVPS*LASMSW Trigger: CCAGGACATGCTGGCGAGTCATGATGGGACAGTTGG...GTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCCTCAGGGCTGAGCATTCTTTGAAGCAGCAGGAAGCAGGGTCAGCGGGGGCACCCTTCAGGAAGTaGCGCTGCTGCTCTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SCLRAEHSLKQQEAGSAGAPFRK*RCCSGA Trigger: AGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGC...CCCCGCTGACCCTGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCCTCAGGGCTGAGCATTCTTTGAAGCAGCAGGAAGCAGGGTCAGCGGGGCTCGCCAGCATGTCCTaGTTGCCTGGGAACAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: SCLRAEHSLKQQEAGSAGLASMS*LPGNSA Trigger: AGCGCTGTTCCCAGGCAACCAGGACATGCTGGCGAG...CCCCGCTGACCCTGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTTCCATGGATGCTCGCCAGCATGTCCTaGTTGCCTGGGAACAGCGCT | + |
|
Preference number: 2 (lower is better) Translates to: SGSGAAALGLTPRDLPWMLASMS*LPGNSA Trigger: AGCGCTGTTCCCAGGCAACCAGGACATGCTGGCGAG...CATCCATGGAAGGTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CCA 90 bp | GACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGGCACCCTTCAGGAAGTaGCGCTGCTGCTCTGGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: DTGSVCLIPCKTGKFPGVAPFRK*RCCSGA Trigger: AGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGC...CACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR TCA 90 bp | GATGGGCAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTGGCAGTCATTGGTGAAGTCAGGCTaGGCACAGCCTGGGGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: DGQQLEVRKRPAEASWQSLVKSG*AQPGVA Trigger: GGCAACCCCAGGCTGTGCTCAGCCTGACTTCACCAA...TGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTGCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CCA 90 bp | GGATCAGAACCCTGGTCTCCTCCCCAAGAACCAGGATGGGCAGCAACTAGAAGTGCAATGGCCCATCTCTaGCGCAGCACCCTTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GSEPWSPPQEPGWAATRSAMAHL*RSTLQE Trigger: TTCCTGAAGGGTGCTGCGCCAGAGATGGGCCATTGC...ACTTCTAGTTGCTGCCCATCCTGGTTCTTGGGGAGGAGACCAGGGTTCTGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCCTCAGGGCTGAGCATTCTTTGAAGCAGCAGGAAGCAGGGTCAGCGGGGCTGGCTCGAGGCATTTaGCTTTGGATTTGCTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SCLRAEHSLKQQEAGSAGLARGI*LWICCD Trigger: GTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAG...CCCCGCTGACCCTGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCAGCGGGGACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGGCTTTGGATTTGCTGTaGCTTGACTGTGTGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: RVSGDTGSVCLIPCKTGKALDLL*LDCVHQ Trigger: CTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGC...CTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTCCCCGCTGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTGGCAGTCACCAGGATTCAGGAAGTGGCGCTaGTGCTCTGGGGCTTACACC | + |
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Preference number: 2 (lower is better) Translates to: QQLEVRKRPAEASWQSPGFRKWR*CSGAYT Trigger: GGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAA...TCCTGGTGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CAA 90 bp | CAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTGTGACTaGACTGTGTGCACCAGGCTGTTCAAGGCACAGAGGCCACACAGA | + |
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Preference number: 2 (lower is better) Translates to: QSRLARGIWLWICCD*TVCTRLFKAQRPHR Trigger: TCTGTGTGGCCTCTGTGCCTTGAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR TCA 90 bp | GATGGGCAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTGGCAGTCACAGGGTCGGTCTGTCTaGTTCCATGCAAGACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: DGQQLEVRKRPAEASWQSQGRSV*FHARLG Trigger: TCCCAGTCTTGCATGGAATCAGACAGACCGACCCTG...TGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTGCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGCTACTTCCTGCCTCAGGGCTGAGCATTCTTTGAAGCAGCAGGAAGCACAGGGTCGGTCTGTCTaGTTCCATGCAAGACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GRATSCLRAEHSLKQQEAQGRSV*FHARLG Trigger: TCCCAGTCTTGCATGGAATCAGACAGACCGACCCTG...TGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGAAGTAGCTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR TCA 90 bp | GAAGTCCTATGGGGACAGGCAAGGCTGGCTAGCCTTTTGGAAGAGCTACTTCCTGGGCTGAGCATTCTTTaGAGCAGCAGGAAGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: EVLWGQARLASLLEELLPGLSIL*SSRKQG Trigger: ACCCTGCTTCCTGCTGCTTCAAAGAATGCTCAGCCC...AGGAAGTAGCTCTTCCAAAAGGCTAGCCAGCCTTGCCTGTCCCCATAGGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTGGCAGTCACCAGGAGGAAGAGCTACTTCCTaGCTCAGGGCTGAGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: QQLEVRKRPAEASWQSPGGRATS*LRAEHS Trigger: AGAATGCTCAGCCCTGAGGCAGGAAGTAGCTCTTCC...TCCTGGTGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCCAGCACCCAAACATTGGATATAGTGCACAACCACCTGTAATCACAGCAACAACAGAGCAGGGATaGGCCCAGCCATGGCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: SSQHPNIGYSAQPPVITATTEQG*AQPWPD Trigger: GTCAGGCCATGGCTGGGCTCATCCCTGCTCTGTTGT...TGCTGTGATTACAGGTGGTTGTGCACTATATCCAATGTTTGGGTGCTGGGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCCTATGGGGACAGGCAAGGCTGGCTAGCCTTTTGGAAGAGCTACTTCCTGTCTGTCTGATTCCATaGAAGACTGGGAAGTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: EVLWGQARLASLLEELLPVCLIP*KTGKFP Trigger: TGGGAACTTCCCAGTCTTGCATGGAATCAGACAGAC...AGGAAGTAGCTCTTCCAAAAGGCTAGCCAGCCTTGCCTGTCCCCATAGGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CCA 90 bp | GACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGCGAGGCATTTGGCTTTaGATTTGCTGTGACTTGACT | + |
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Preference number: 2 (lower is better) Translates to: DTGSVCLIPCKTGKFPGVRGIWL*ICCDLT Trigger: AGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCG...CACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAACCTCCTCACATCCAGAGTCAAAGCATTCCTGGGTACATGGGATCAGAAGGAAAGAAGTCCTATaGGGACAGGCAAGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LRTSSHPESKHSWVHGIRRKEVL*GQARLA Trigger: AGCCAGCCTTGCCTGTCCCCATAGGACTTCTTTCCT...TCTGATCCCATGTACCCAGGAATGCTTTGACTCTGGATGTGAGGAGGTTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCCAGCACCCAAACATTGGATATAGTGCACAACCACCTGTAATCACAGCAAGCCCAGCCATGGCCTaGCACATTAGGACGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: SSQHPNIGYSAQPPVITASPAMA*HIRTTS Trigger: TGAAGTCGTCCTAATGTGTCAGGCCATGGCTGGGCT...TGCTGTGATTACAGGTGGTTGTGCACTATATCCAATGTTTGGGTGCTGGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAACCTCCTCACATCCAGAGTCAAAGCATTCCTGGGTACATGGGATCAGACCATGGATGTCCGCTTaGCAGAGACAAAAGGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: LRTSSHPESKHSWVHGIRPWMSA*QRQKED Trigger: ATCTTCCTTTTGTCTCTGTCAAGCGGACATCCATGG...TCTGATCCCATGTACCCAGGAATGCTTTGACTCTGGATGTGAGGAGGTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAGCTACTTCCTGCCTCAGGGCTGAGCATTCTTTGAAGCAGCAGGAAGCAATTTGGCTTTGGATTTaGTGTGACTTGACTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GRATSCLRAEHSLKQQEAIWLWI*CDLTVC Trigger: GCACACAGTCAAGTCACAGCAAATCCAAAGCCAAAT...TGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGAAGTAGCTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CCA 90 bp | GTTAGGAGCTGTTTCCAGACTGGAGTTCAGTTCCCAGCACCCAAACATTGGATATCCAACGCCCTCTTCTaGCTTTCACAATCACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VRSCFQTGVQFPAPKHWISNALF*LSQSPG Trigger: TCCAGGTGATTGTGAAAGCCAGAAGAGGGCGTTGGA...TATCCAATGTTTGGGTGCTGGGAACTGAACTCCAGTCTGGAAACAGCTCCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAGTTCCCAGGAGTGCTCACTTGACCCAAATCAAACAATGGATCTTCAATCCATGGATGTCCGCTTaGCAGAGACAAAAGGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: WEVPRSAHLTQIKQWIFNPWMSA*QRQKED Trigger: ATCTTCCTTTTGTCTCTGTCAAGCGGACATCCATGG...ATTGAAGATCCATTGTTTGATTTGGGTCAAGTGAGCACTCCTGGGAACTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CAA 90 bp | AAAAGCACTTTGATTTACATGGGAATTCAGGACAGTTACAATACTTaGCCAAGTGTGGCTAGACTTCAGGAAGTCCTTCTAGTCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KSTLIYMGIQDSYNT*PSVARLQEVLLVCP Trigger: TGGACAGACTAGAAGGACTTCCTGAAGTCTAGCCACACTTGGCAAAGTATTGTAACTGTCCTGAATTCCCATGTAAATCAAAGTGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGAGCACAGCCTGGGGTaGCCCAGTATCCTCATCTCA | + |
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Preference number: 3 (lower is better) Translates to: SGAAPFRKWRCCSGAYTQEHSLG*PSILIS Trigger: TGAGATGAGGATACTGGGCAACCCCAGGCTGTGCTC...CTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CCA 72 bp | GAGGCCACACAGAGACACAAGGCAATGGCCCATCTCTaGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: EATQRHKAMAHL*RSTLQEVALLL Trigger: GAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGAGATGGGCCATTGCCTTGTGTCTCTGTGTGGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CCA 72 bp | CAGCCTGGGGTTGCCCAGTATCCTCATCTCACTGCCTaGATGGGGGCACAAGCCTGTCCCAACTGTCCCATC | + |
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Preference number: 3 (lower is better) Translates to: QPGVAQYPHLTA*MGAQACPNCPI Trigger: GATGGGACAGTTGGGACAGGCTTGTGCCCCCATCCAGGCAGTGAGATGAGGATACTGGGCAACCCCAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR TCA 72 bp | GAAGCAGGGTCAGCGGGGACACAGGGTCGGTCTGTCTaGTTCCATGCAAGACTGGGAAGTTCCCAGGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: EAGSAGTQGRSV*FHARLGSSQEC Trigger: GCACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTCCCCGCTGACCCTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR GCA 72 bp | CCATTTGGTGAAGTCAGGCTGAGCACAGCCTGGGGTTaGCCAGTATCCTCATCTCACTGCCTGGATGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: PFGEVRLSTAWG*PVSSSHCLDGG Trigger: GCCCCCATCCAGGCAGTGAGATGAGGATACTGGGCAACCCCAGGCTGTGCTCAGCCTGACTTCACCAAATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CAA 90 bp | GACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGGCCAGCATGTCCTGGTaGCCTGGGAACAGCGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: DTGSVCLIPCKTGKFPGVASMSW*PGNSAS Trigger: GGAAGCGCTGTTCCCAGGCAACCAGGACATGCTGGC...CACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR-3UTR CAA 90 bp | TCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTGTGACTTGACTGTGTGCGAGCACAGCCTGGGGTaGCCCAGTATCCTCATCTCA | + |
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Preference number: 3 (lower is better) Translates to: SRLARGIWLWICCDLTVCEHSLG*PSILIS Trigger: TGAGATGAGGATACTGGGCAACCCCAGGCTGTGCTC...GCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| 3UTR CCA 72 bp | GTGGTCCAACGCCCTCTTCTGGCTTTCACAATCACCTaGATACACAACAGAGCAGGGATGAGCCCAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VVQRPLLAFTIT*IHNRAGMSPAM Trigger: CATGGCTGGGCTCATCCCTGCTCTGTTGTGTATCCAGGTGATTGTGAAAGCCAGAAGAGGGCGTTGGACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
||
| 3UTR TCA 72 bp | TGGCTCGAGGCATTTGGCTTTGGATTTGCTGTGACTTaGCTGTGTGCACCAGGCTGTTCAAGGCACAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WLEAFGFGFAVT*LCAPGCSRHRG Trigger: GCCTCTGTGCCTTGAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR TCA 72 bp | TCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTGTaGCTTGACTGTGTGCACCAGGCTGTTCAAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SAGSRHLALDLL*LDCVHQAVQGT Trigger: TGTGCCTTGAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR CCA 72 bp | GGACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTaGGAAGTTCCCAGGAGTGCTCACTTGACCCAAATC | + |
|
Preference number: 3 (lower is better) Translates to: GHRVGLSDSMQD*EVPRSAHLTQI Trigger: GATTTGGGTCAAGTGAGCACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR CCA 72 bp | TCACCAGGAAAGAAGTCCTATGGGGACAGGCAAGGCTaGCTAGCCTTTTGGAAGAGCTACTTCCTGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPGKKSYGDRQG*LAFWKSYFLPQ Trigger: CTGAGGCAGGAAGTAGCTCTTCCAAAAGGCTAGCCAGCCTTGCCTGTCCCCATAGGACTTCTTTCCTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR CCA 72 bp | AGTCAAAGCATTCCTGGGTACATGGGATCAGAACCCTaGTCTCCTCCCCAAGAACCAGGATGGGCAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: SQSIPGYMGSEP*SPPQEPGWAAT Trigger: AGTTGCTGCCCATCCTGGTTCTTGGGGAGGAGACCAGGGTTCTGATCCCATGTACCCAGGAATGCTTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR CCA 72 bp | CTCCTCACATCCAGAGTCAAAGCATTCCTGGGTACATaGGATCAGAACCCTGGTCTCCTCCCCAAGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLTSRVKAFLGT*DQNPGLLPKNQ Trigger: CTGGTTCTTGGGGAGGAGACCAGGGTTCTGATCCCATGTACCCAGGAATGCTTTGACTCTGGATGTGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR GCA 72 bp | GGCATTTGGCTTTGGATTTGCTGTGACTTGACTGTGTaGACCAGGCTGTTCAAGGCACAGAGGCCACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: GIWLWICCDLTV*TRLFKAQRPHR Trigger: TCTGTGTGGCCTCTGTGCCTTGAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR GCA 72 bp | CAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTaGTGTGACTTGACTGTGTGCACCAGGCTGTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QSRLARGIWLWI*CDLTVCTRLFK Trigger: CTTGAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR CCA 72 bp | CAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTaGCAGTCACCAGGAAAGAAGTCCTATGGGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLEVRKRPAEAS*QSPGKKSYGDR Trigger: CCTGTCCCCATAGGACTTCTTTCCTGGTGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAAGTTCCCAGGAGTGCTCACTTGACCCAAATCAAACAATGGATCTTCAATGCCAGCATGTCCTGGTaGCCTGGGAACAGCGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: WEVPRSAHLTQIKQWIFNASMSW*PGNSAS Trigger: GGAAGCGCTGTTCCCAGGCAACCAGGACATGCTGGC...ATTGAAGATCCATTGTTTGATTTGGGTCAAGTGAGCACTCCTGGGAACTTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAACCTCCTCACATCCAGAGTCAAAGCATTCCTGGGTACATGGGATCAGATGGATTTGCTGTGACTaGACTGTGTGCACCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRTSSHPESKHSWVHGIRWICCD*TVCTRL Trigger: CAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCA...TCTGATCCCATGTACCCAGGAATGCTTTGACTCTGGATGTGAGGAGGTTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR TCA 72 bp | CTTTCACAATCACCTGGATACACAACAGAGCAGGGATaGGCCCAGCCATGGCCTGACACATTAGGACGACTT | + |
|
Preference number: 3 (lower is better) Translates to: LSQSPGYTTEQG*AQPWPDTLGRL Trigger: AAGTCGTCCTAATGTGTCAGGCCATGGCTGGGCTCATCCCTGCTCTGTTGTGTATCCAGGTGATTGTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
||
| 3UTR CCA 72 bp | GTTCCCAGGAGTGCTCACTTGACCCAAATCAAACAATaGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VPRSAHLTQIKQ*IFNLGWLEAFG Trigger: GCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTTGATTTGGGTCAAGTGAGCACTCCTGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR TCA 72 bp | ATACACAACAGAGCAGGGATGAGCCCAGCCATGGCCTaGCACATTAGGACGACTTCAGAAACCCAAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: IHNRAGMSPAMA*HIRTTSETQEK Trigger: TTTTTCTTGGGTTTCTGAAGTCGTCCTAATGTGTCAGGCCATGGCTGGGCTCATCCCTGCTCTGTTGTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
||
| 3UTR CCA 72 bp | TTGACCCAAATCAAACAATGGATCTTCAATCTCGGCTaGCTCGAGGCATTTGGCTTTGGATTTGCTGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: LTQIKQWIFNLG*LEAFGFGFAVT Trigger: AGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTTGATTTGGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTCTCAGGTGATCTGTaGTCTTGGGGAGGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: AQHPSGSGAAALGLTPRDLSGDL*SWGGTT Trigger: GGTGGTGCCTCCCCAAGACCACAGATCACCTGAGAG...GTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCCATCTCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTGCCTTCTTCCATGTCTaGACTGCAGCCTCCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WPISGAAPFRKWRCCSGAAFFHV*TAASKG Trigger: GCCTTTGGAGGCTGCAGTCCAGACATGGAAGAAGGC...AGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGAGATGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGTGATCTGTGGTCTTaGGGAGGCACCACCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGAAPFRKWRCCSGAYTQGDLWS*GGTTHL Trigger: GAGATGGGTGGTGCCTCCCCAAGACCACAGATCACC...CTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | TGGCCCATCTCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTATTCTCGCTCCCATCTaGGGGCTTGAAATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPISGAAPFRKWRCCSGAILAPI*GLEILL Trigger: GAGGAGGATTTCAAGCCCTCAGATGGGAGCGAGAAT...AGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGAGATGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTTCCATGGATGGATGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSGAAALGLTPRDLPWMDGPRP*FRSCMV Trigger: CACCATGCATGACCTGAAGCAGGGCCTGGGCCCATC...CATCCATGGAAGGTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTCAGGGCTGAGCATTCTTTGAAGCAGCAGGAAGCAGGGTCAGCGGGGCACAGGGTGGCAGTATaGGTCCTTGGGCCGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SCLRAEHSLKQQEAGSAGHRVAV*VLGPEV Trigger: TACTTCCGGCCCAAGGACCCATACTGCCACCCTGTG...CCCCGCTGACCCTGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAGCGGGGACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGACAAAGATGGCGTTGTaGGGGCGCCGGGCTCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: RVSGDTGSVCLIPCKTGKTKMAL*GRRALL Trigger: GAGTAGAGCCCGGCGCCCCCACAACGCCATCTTTGT...CTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTCCCCGCTGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTTCCATGGACTCTCAGGTGATCTGTaGTCTTGGGGAGGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: LQEVALLLWGLHPGTFHGLSGDL*SWGGTT Trigger: GGTGGTGCCTCCCCAAGACCACAGATCACCTGAGAG...TCCATGGAAGGTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGCAGTGTCCTCAAAGTTaGCAAAGATGGCGTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGAAPFRKWRCCSGAYTQQCPQS*QRWRCG Trigger: CCCACAACGCCATCTTTGTCAACTTTGAGGACACTG...CTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTTCCATGGAATGGTGTCTCTCAGGTaGTCTGTGGTCTTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQEVALLLWGLHPGTFHGMVSLR*SVVLGR Trigger: CCTCCCCAAGACCACAGATCACCTGAGAGACACCAT...TCCATGGAAGGTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | CAAGCCTGTCCCAACTGTCCCATCATGACTCGCCAGCATGTCCTGGTTGCCTGGCCCTGCTTCAGGTCATaGATGGTGCCAGGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QACPNCPIMTRQHVLVAWPCFRS*MVPGWL Trigger: CAACCAGCCTGGCACCATGCATGACCTGAAGCAGGG...CCAGGCAACCAGGACATGCTGGCGAGTCATGATGGGACAGTTGGGACAGGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCCATCTCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTCTCCCCTGAGATGGTaGGATTATGATAGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPISGAAPFRKWRCCSGASPLRW*DYDSLL Trigger: GAGAAGGCTATCATAATCCCACCATCTCAGGGGAGA...AGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGAGATGGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACGGTTCTCCCCTGAGATaGTGGGATTATGATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQHPSGSGAAALGLTPRDGSPLR*WDYDSL Trigger: AAGGCTATCATAATCCCACCATCTCAGGGGAGAACC...GTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTTCCATGGATGATTCTCGCTCCCATCTaGGGGCTTGAAATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGSGAAALGLTPRDLPWMILAPI*GLEILL Trigger: GAGGAGGATTTCAAGCCCTCAGATGGGAGCGAGAAT...CATCCATGGAAGGTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTTCCATGGATGTCAGGTCATGCATGGTaGCAGGCTGGTTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSGAAALGLTPRDLPWMSGHAW*QAGWMS Trigger: AGACATCCAACCAGCCTGGCACCATGCATGACCTGA...CATCCATGGAAGGTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | GGGGCTTACACCCAGGGACCTTCCATGGATGTCCGCTTGACAGAGACAAAAGGAGATGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAYTQGPSMDVRLTETKGDGPRP*FRSCMV Trigger: CACCATGCATGACCTGAAGCAGGGCCTGGGCCCATC...TCCTTTTGTCTCTGTCAAGCGGACATCCATGGAAGGTCCCTGGGTGTAAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | CAAGCCTGTCCCAACTGTCCCATCATGACTCGCCAGCATGTCCTGGTTGCCTGGGCTTCAGGTCATGCATaGTGCCAGGCTGGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QACPNCPIMTRQHVLVAWASGHA*CQAGWM Trigger: CATCCAACCAGCCTGGCACCATGCATGACCTGAAGC...CCAGGCAACCAGGACATGCTGGCGAGTCATGATGGGACAGTTGGGACAGGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | CAAGCCTGTCCCAACTGTCCCATCATGACTCGCCAGCATGTCCTGGTTGCCTGGTCAGGTCATGCATGGTaGCAGGCTGGTTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QACPNCPIMTRQHVLVAWSGHAW*QAGWMS Trigger: AGACATCCAACCAGCCTGGCACCATGCATGACCTGA...CCAGGCAACCAGGACATGCTGGCGAGTCATGATGGGACAGTTGGGACAGGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GACTGTGTGCACCAGGCTGTTCAAGGCACAGAGGCCACACAGAGACACAAGGCAGGCAGTATGGGTCCTTaGGCCGGAAGTAGAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DCVHQAVQGTEATQRHKAGSMGP*AGSRVR Trigger: TCGAACTCTACTTCCGGCCCAAGGACCCATACTGCC...TGCCTTGTGTCTCTGTGTGGCCTCTGTGCCTTGAACAGCCTGGTGCACACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACTTAAGCTTGTCAGGATaGACACTGACGTTAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQHPSGSGAAALGLTPRDLSLSG*TLTLDL Trigger: CAAGTCTAACGTCAGTGTCCATCCTGACAAGCTTAA...GTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCCATCTCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTGGACTTGATAAATCTTaGCATCTGGGTGTTTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WPISGAAPFRKWRCCSGAGLDKS*HLGVFE Trigger: CTCGAAAACACCCAGATGCCAAGATTTATCAAGTCC...AGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGAGATGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GACTGTGTGCACCAGGCTGTTCAAGGCACAGAGGCCACACAGAGACACAAGGCAGCTTCAGGTCATGCATaGTGCCAGGCTGGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DCVHQAVQGTEATQRHKAASGHA*CQAGWM Trigger: CATCCAACCAGCCTGGCACCATGCATGACCTGAAGC...TGCCTTGTGTCTCTGTGTGGCCTCTGTGCCTTGAACAGCCTGGTGCACACAGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GGATCAGAACCCTGGTCTCCTCCCCAAGAACCAGGATGGGCAGCAACTAGAAGTGGTGATCTGTGGTCTTaGGGAGGCACCACCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSEPWSPPQEPGWAATRSGDLWS*GGTTHL Trigger: GAGATGGGTGGTGCCTCCCCAAGACCACAGATCACC...ACTTCTAGTTGCTGCCCATCCTGGTTCTTGGGGAGGAGACCAGGGTTCTGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GATGGGCAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTGGCAGTCACACAGGGTGGCAGTATaGGTCCTTGGGCCGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DGQQLEVRKRPAEASWQSHRVAV*VLGPEV Trigger: TACTTCCGGCCCAAGGACCCATACTGCCACCCTGTG...TGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTGCCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAGCGGGGACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGTGCACTGCCAAGTACTaGAAGTCAGACATTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSGDTGSVCLIPCKTGKCTAKY*KSDIPW Trigger: CCAGGGAATGTCTGACTTCCAGTACTTGGCAGTGCA...CTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTCCCCGCTGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTTCCATGGAGCACTCTGTCATACATaGAAACATGCTTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQEVALLLWGLHPGTFHGALCHT*KHACHQ Trigger: CTGGTGGCAAGCATGTTTCCATGTATGACAGAGTGC...TCCATGGAAGGTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTTCCATGGATGGGTTCTCCCCTGAGATaGTGGGATTATGATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGSGAAALGLTPRDLPWMGSPLR*WDYDSL Trigger: AAGGCTATCATAATCCCACCATCTCAGGGGAGAACC...CATCCATGGAAGGTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCCATCTCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTATAAATCTTGGCATCTaGGTGTTTTCGAGGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: WPISGAAPFRKWRCCSGAINLGI*VFSRVI Trigger: TATGACCCTCGAAAACACCCAGATGCCAAGATTTAT...AGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGAGATGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR CAA 72 bp | GAAGTCCTATGGGGACAGGCAAGGCTGGCTAGCCTTTaGGAAGAGCTACTTCCTGCCTCAGGGCTGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: EVLWGQARLASL*EELLPASGLSI Trigger: AATGCTCAGCCCTGAGGCAGGAAGTAGCTCTTCCAAAAGGCTAGCCAGCCTTGCCTGTCCCCATAGGACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGCTACTTCCTGCCTCAGGGCTGAGCATTCTTTGAAGCAGCAGGAAGCAATGGTGTCTCTCAGGTaGTCTGTGGTCTTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRATSCLRAEHSLKQQEAMVSLR*SVVLGR Trigger: CCTCCCCAAGACCACAGATCACCTGAGAGACACCAT...TGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGAAGTAGCTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | GACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGTCCCATCTGAGGGCTTaGAATCCTCCTCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTGSVCLIPCKTGKFPGVSHLRA*NPPPPL Trigger: AAGAGGAGGAGGAGGATTTCAAGCCCTCAGATGGGA...CACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | GACTGTGTGCACCAGGCTGTTCAAGGCACAGAGGCCACACAGAGACACAAGGCAACCCATCTCTCTCTGTaGACACAGTCTCTGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DCVHQAVQGTEATQRHKATHLSL*TQSLSH Trigger: ATGGGACAGAGACTGTGTGCACAGAGAGAGATGGGT...TGCCTTGTGTCTCTGTGTGGCCTCTGTGCCTTGAACAGCCTGGTGCACACAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCTATGGGGACAGGCAAGGCTGGCTAGCCTTTTGGAAGAGCTACTTCCTGCCTTCTTCCATGTCTaGACTGCAGCCTCCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVLWGQARLASLLEELLPAFFHV*TAASKG Trigger: GCCTTTGGAGGCTGCAGTCCAGACATGGAAGAAGGC...AGGAAGTAGCTCTTCCAAAAGGCTAGCCAGCCTTGCCTGTCCCCATAGGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGCTCACTTGACCCAACATCTGTCGATAGGGTaGCAGAGCCCCTTCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSDSMQDWEVPRSAHLTQHLSIG*QSPFPE Trigger: TTCCGGGAAGGGGCTCTGCCACCCTATCGACAGATG...TTGGGTCAAGTGAGCACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR CAA 72 bp | CTGGCTCGAGGCATTTGGCTTTGGATTTGCTGTGACTaGACTGTGTGCACCAGGCTGTTCAAGGCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LARGIWLWICCD*TVCTRLFKAQR Trigger: CCTCTGTGCCTTGAACAGCCTGGTGCACACAGTCAAGTCACAGCAAATCCAAAGCCAAATGCCTCGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | CAAGCCTGTCCCAACTGTCCCATCATGACTCGCCAGCATGTCCTGGTTGCCTGGAATCAGGTTCTCCCCTaGGATGGTGGGATTATGATA | + |
|
Preference number: 4 (lower is better) Translates to: QACPNCPIMTRQHVLVAWNQVLP*DGGIMI Trigger: TATCATAATCCCACCATCTCAGGGGAGAACCTGATT...CCAGGCAACCAGGACATGCTGGCGAGTCATGATGGGACAGTTGGGACAGGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | GGGGCTTACACCCAGGGACCTTCCATGGATGTCCGCTTGACAGAGACAAAAGGACAGTGTCCTCAAAGTTaGCAAAGATGGCGTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAYTQGPSMDVRLTETKGQCPQS*QRWRCG Trigger: CCCACAACGCCATCTTTGTCAACTTTGAGGACACTG...TCCTTTTGTCTCTGTCAAGCGGACATCCATGGAAGGTCCCTGGGTGTAAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | GACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGACCCATCTCTCTCTGTaGACACAGTCTCTGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DTGSVCLIPCKTGKFPGVTHLSL*TQSLSH Trigger: ATGGGACAGAGACTGTGTGCACAGAGAGAGATGGGT...CACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | AACTGTCCCATCATGACTCGCCAGCATGTCCTGGTTGCCTGGGAACAGCGCTTCGCACTCTGTCATACATaGAAACATGCTTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NCPIMTRQHVLVAWEQRFALCHT*KHACHQ Trigger: CTGGTGGCAAGCATGTTTCCATGTATGACAGAGTGC...GAAGCGCTGTTCCCAGGCAACCAGGACATGCTGGCGAGTCATGATGGGACAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GGATCAGAACCCTGGTCTCCTCCCCAAGAACCAGGATGGGCAGCAACTAGAAGTCAGCCTTACCTGTGTTaGAGAAAAGAGCAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSEPWSPPQEPGWAATRSQPYLC*RKEQAS Trigger: AGAGGCCTGCTCTTTTCTCCAACACAGGTAAGGCTG...ACTTCTAGTTGCTGCCCATCCTGGTTCTTGGGGAGGAGACCAGGGTTCTGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | GACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGGATCTATGGGATTGGTaGAGGCCTTCTTCCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTGSVCLIPCKTGKFPGVDLWDW*RPSSMS Trigger: AGACATGGAAGAAGGCCTGCACCAATCCCATAGATC...CACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | TACACCCAGGGACCTTCCATGGATGTCCGCTTGACAGAGACAAAAGGAAGATGTTTAGCACACACAGGGTaGCAGTATGGGTCCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YTQGPSMDVRLTETKGRCLAHTG*QYGSLG Trigger: GCCCAAGGACCCATACTGCCACCCTGTGTGTGCTAA...ACATCTTCCTTTTGTCTCTGTCAAGCGGACATCCATGGAAGGTCCCTGGGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | GGGGCTTACACCCAGGGACCTTCCATGGATGTCCGCTTGACAGAGACAAAAGGAAATCAGGTTCTCCCCTaGGATGGTGGGATTATGATA | + |
|
Preference number: 4 (lower is better) Translates to: GAYTQGPSMDVRLTETKGNQVLP*DGGIMI Trigger: TATCATAATCCCACCATCTCAGGGGAGAACCTGATT...TCCTTTTGTCTCTGTCAAGCGGACATCCATGGAAGGTCCCTGGGTGTAAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | GGATCAGAACCCTGGTCTCCTCCCCAAGAACCAGGATGGGCAGCAACTAGAAGTTCATACATGGAAACATaGTTGCCACCAGCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSEPWSPPQEPGWAATRSSYMET*LPPASV Trigger: CACAGAAGCTGGTGGCAAGCATGTTTCCATGTATGA...ACTTCTAGTTGCTGCCCATCCTGGTTCTTGGGGAGGAGACCAGGGTTCTGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGCTACTTCCTGCCTCAGGGCTGAGCATTCTTTGAAGCAGCAGGAAGCAGATCTATGGGATTGGTaGAGGCCTTCTTCCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRATSCLRAEHSLKQQEADLWDW*RPSSMS Trigger: AGACATGGAAGAAGGCCTGCACCAATCCCATAGATC...TGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGAAGTAGCTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTCCCTGCTTCAGGTCATaGATGGTGCCAGGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQWIFNLGWLEAFGFGFAPCFRS*MVPGWL Trigger: CAACCAGCCTGGCACCATGCATGACCTGAAGCAGGG...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTGGCAGTCACCAGGATCTGATCTATGGGATTaGTGCAGGCCTTCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QQLEVRKRPAEASWQSPGSDLWD*CRPSSM Trigger: CATGGAAGAAGGCCTGCACCAATCCCATAGATCAGA...TCCTGGTGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTCATCTGTCGATAGGGTaGCAGAGCCCCTTCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQWIFNLGWLEAFGFGFAHLSIG*QSPFPE Trigger: TTCCGGGAAGGGGCTCTGCCACCCTATCGACAGATG...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTGGCAGTATGGGTCCTTaGGCCGGAAGTAGAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KQWIFNLGWLEAFGFGFAGSMGP*AGSRVR Trigger: TCGAACTCTACTTCCGGCCCAAGGACCCATACTGCC...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGCTCACTTGACCCAATCTGATCTATGGGATTaGTGCAGGCCTTCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSDSMQDWEVPRSAHLTQSDLWD*CRPSSM Trigger: CATGGAAGAAGGCCTGCACCAATCCCATAGATCAGA...TTGGGTCAAGTGAGCACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | AACTGTCCCATCATGACTCGCCAGCATGTCCTGGTTGCCTGGGAACAGCGCTTCTGTAGACCGAATCCTTaGGTTTGTATTTATTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NCPIMTRQHVLVAWEQRFCRPNP*VCIYCR Trigger: CCTACAATAAATACAAACTCAAGGATTCGGTCTACA...GAAGCGCTGTTCCCAGGCAACCAGGACATGCTGGCGAGTCATGATGGGACAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTTCCCATCTGAGGGCTTaGAATCCTCCTCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQWIFNLGWLEAFGFGFASHLRA*NPPPPL Trigger: AAGAGGAGGAGGAGGATTTCAAGCCCTCAGATGGGA...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | TTACACCCAGGGACCTTCCATGGATGTCCGCTTGACAGAGACAAAAGGAAGATGAGCTTCTGTGTGCACTaGCAAGTACTGGAAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHPGTFHGCPLDRDKRKMSFCVH*QVLEVR Trigger: TCTGACTTCCAGTACTTGGCAGTGCACACAGAAGCT...CATCTTCCTTTTGTCTCTGTCAAGCGGACATCCATGGAAGGTCCCTGGGTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTCCACCAGCTTCTGTGTaGACTGCCAAGTACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQWIFNLGWLEAFGFGFAPPASV*TAKYWK Trigger: CTTCCAGTACTTGGCAGTGCACACAGAAGCTGGTGG...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGAACCTCCTCACATCCAGAGTCAAAGCATTCCTGGGTACATGGGATCAGATCTCCCCTGAGATGGTaGGATTATGATAGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTSSHPESKHSWVHGIRSPLRW*DYDSLL Trigger: GAGAAGGCTATCATAATCCCACCATCTCAGGGGAGA...TCTGATCCCATGTACCCAGGAATGCTTTGACTCTGGATGTGAGGAGGTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | GATGGGCAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTGGCAGTCAGGACTTGATAAATCTTaGCATCTGGGTGTTTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGQQLEVRKRPAEASWQSGLDKS*HLGVFE Trigger: CTCGAAAACACCCAGATGCCAAGATTTATCAAGTCC...TGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTGCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| 3UTR CAA 72 bp | TCCATGCAAGACTGGGAAGTTCCCAGGAGTGCTCACTaGACCCAAATCAAACAATGGATCTTCAATCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMQDWEVPRSAH*TQIKQWIFNLG Trigger: GCCGAGATTGAAGATCCATTGTTTGATTTGGGTCAAGTGAGCACTCCTGGGAACTTCCCAGTCTTGCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR TCA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTCTTGACAGCATTTCGTaGCCAAACAGGACGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQWIFNLGWLEAFGFGFALDSIS*PNRTDV Trigger: GACATCCGTCCTGTTTGGTCACGAAATGCTGTCAAG...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTTGCACTGCCAAGTACTaGAAGTCAGACATTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQWIFNLGWLEAFGFGFACTAKY*KSDIPW Trigger: CCAGGGAATGTCTGACTTCCAGTACTTGGCAGTGCA...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTGGCAGTCACCAGGAATAAATCTTGGCATCTaGGTGTTTTCGAGGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QQLEVRKRPAEASWQSPGINLGI*VFSRVI Trigger: TATGACCCTCGAAAACACCCAGATGCCAAGATTTAT...TCCTGGTGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGTTCCCAGGAGTGCTCACTTGACCCAAATCAAACAATGGATCTTCAATAGCTTCTGTGTGCACTaGCAAGTACTGGAAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WEVPRSAHLTQIKQWIFNSFCVH*QVLEVR Trigger: TCTGACTTCCAGTACTTGGCAGTGCACACAGAAGCT...ATTGAAGATCCATTGTTTGATTTGGGTCAAGTGAGCACTCCTGGGAACTTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGTTCCCAGGAGTGCTCACTTGACCCAAATCAAACAATGGATCTTCAATTCATACATGGAAACATaGTTGCCACCAGCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WEVPRSAHLTQIKQWIFNSYMET*LPPASV Trigger: CACAGAAGCTGGTGGCAAGCATGTTTCCATGTATGA...ATTGAAGATCCATTGTTTGATTTGGGTCAAGTGAGCACTCCTGGGAACTTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CCA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTTTAAGCTTGTCAGGATaGACACTGACGTTAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQWIFNLGWLEAFGFGFALSLSG*TLTLDL Trigger: CAAGTCTAACGTCAGTGTCCATCCTGACAAGCTTAA...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | TGGCCCATCTCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTGGTTGGATGTCTTCTaGACGGTGATGGGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WPISGAAPFRKWRCCSGAWLDVF*TVMGRL Trigger: CAGCCTGCCCATCACCGTCAAGAAGACATCCAACCA...AGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGAGATGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CCA 90 bp | AACCTCGAGAGACGCTTTCCTCGCCGCCCAGGGTCTGTAGCATCTTaGCCTCGTTACGTACTACGCCCGGGTACTCCACGCACACCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLERRFPRRPGSVAS*PRYVLRPGTPRTPS Trigger: GCTTGGTGTGCGTGGAGTACCCGGGCGTAGTACGTAACGAGGCCAAGATGCTACAGACCCTGGGCGGCGAGGAAAGCGTCTCTCGAGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
||
| CDS CCA 90 bp | AGATTCGAGAGACGCTTTCCTCGCCGCCCAGGGTCTGTAGCATCTTaGCCTCGTTACGTACTACGCCCGGGTACTCCACGCACACCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFERRFPRRPGSVAS*PRYVLRPGTPRTPS Trigger: GCTTGGTGTGCGTGGAGTACCCGGGCGTAGTACGTAACGAGGCCAAGATGCTACAGACCCTGGGCGGCGAGGAAAGCGTCTCTCGAATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTCAGCGGGGACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGTTGACAAAGATGGCGTaGTGGGGGCGCCGGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RVSGDTGSVCLIPCKTGKLTKMA*WGRRAL Trigger: TAGAGCCCGGCGCCCCCACAACGCCATCTTTGTCAA...CTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTCCCCGCTGACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CCA 90 bp | GGGGGCGCCGGGCTCTACTCAGTCCAATCAGGTTCTCCCCTGAGATaGTGGGATTATGATAGCCTTCTCGGTGCTGTGTCTCAGGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGAGLYSVQSGSPLR*WDYDSLLGAVSQGD Trigger: ATCGCCCTGAGACACAGCACCGAGAAGGCTATCATAATCCCACCATCTCAGGGGAGAACCTGATTGGACTGAGTAGAGCCCGGCGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACCTTCCATGGATCCTCCTTCTCAGGCTaGCGCATGAGCACTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQEVALLLWGLHPGTFHGSSFSG*RMSTLS Trigger: TGACAGAGTGCTCATGCGCAAGCCTGAGAAGGAGGA...TCCATGGAAGGTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS TCA 90 bp | GTTGTGGGGGCGCCGGGCTCTACTCAGTCCAATCAGGTTCTCCCCTaGGATGGTGGGATTATGATAGCCTTCTCGGTGCTGTGTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VVGAPGSTQSNQVLP*DGGIMIAFSVLCLR Trigger: CCTGAGACACAGCACCGAGAAGGCTATCATAATCCCACCATCTCAGGGGAGAACCTGATTGGACTGAGTAGAGCCCGGCGCCCCCACAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | GCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACACACTGACGTTAGACTaGACAGCATTTCGTGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: AQHPSGSGAAALGLTPRDTLTLD*TAFRDQ Trigger: TTGGTCACGAAATGCTGTCAAGTCTAACGTCAGTGT...GTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS TCA 90 bp | CTGCAGCCTCCAAAGGCTGTTCAGGAACCTCAGTGTCCTCAAAGTTaGCAAAGATGGCGTTGTGGGGGCGCCGGGCTCTACTCAGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LQPPKAVQEPQCPQS*QRWRCGGAGLYSVQ Trigger: TTGGACTGAGTAGAGCCCGGCGCCCCCACAACGCCATCTTTGTCAACTTTGAGGACACTGAGGTTCCTGAACAGCCTTTGGAGGCTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CCA 90 bp | GTGGAGATGATGCCAATGATCTCCAAGTTGAACGTGACCTGGGGGTaGGCCTCGTCTCCCAGGACACCTCTCCGACGCCTTGTTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VEMMPMISKLNVTWG*ASSPRTPLRRLVLF Trigger: GAAAAGAACAAGGCGTCGGAGAGGTGTCCTGGGAGACGAGGCCCACCCCCAGGTCACGTTCAACTTGGAGATCATTGGCATCATCTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CCA 90 bp | GGCGCCGGGCTCTACTCAGTCCAATCAGGTTCTCCCCTGAGATGGTaGGATTATGATAGCCTTCTCGGTGCTGTGTCTCAGGGCGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: GAGLYSVQSGSPLRW*DYDSLLGAVSQGDR Trigger: TCTATCGCCCTGAGACACAGCACCGAGAAGGCTATCATAATCCCACCATCTCAGGGGAGAACCTGATTGGACTGAGTAGAGCCCGGCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGACACTGACGTTAGACTaGACAGCATTTCGTGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SGAAPFRKWRCCSGAYTQTLTLD*TAFRDQ Trigger: TTGGTCACGAAATGCTGTCAAGTCTAACGTCAGTGT...CTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CCA 90 bp | TGTTCAGGAACCTCAGTGTCCTCAAAGTTGACAAAGATGGCGTTGTaGGGGCGCCGGGCTCTACTCAGTCCAATCAGGTTCTCCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSGTSVSSKLTKMAL*GRRALLSPIRFSPE Trigger: CTCAGGGGAGAACCTGATTGGACTGAGTAGAGCCCGGCGCCCCCACAACGCCATCTTTGTCAACTTTGAGGACACTGAGGTTCCTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | GCGCAGCACCCTTCAGGAAGTGGCGCTGCTGCTCTGGGGCTTACACCCAGGGACTCGAAAATCAAGGACTaGATAAATCTTGGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQHPSGSGAAALGLTPRDSKIKD*INLGIW Trigger: CCAGATGCCAAGATTTATCAAGTCCTTGATTTTCGA...GTCCCTGGGTGTAAGCCCCAGAGCAGCAGCGCCACTTCCTGAAGGGTGCTGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | GACACAGGGTCGGTCTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGTGGTTGGATGTCTTCTaGACGGTGATGGGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DTGSVCLIPCKTGKFPGVWLDVF*TVMGRL Trigger: CAGCCTGCCCATCACCGTCAAGAAGACATCCAACCA...CACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS TCA 90 bp | GATCAGCCTTACCAGGCCTCTCAGAGCGGATGGTCTGTAGAATCATaGGTGACATGGTGTCTCTCAGGTGATCTGTGGTCTTGGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DQPYQASQSGWSVES*VTWCLSGDLWSWGG Trigger: GCCTCCCCAAGACCACAGATCACCTGAGAGACACCATGTCACTCATGATTCTACAGACCATCCGCTCTGAGAGGCCTGGTAAGGCTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028157.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGAGCTACTTCCTGCCTCAGGGCTGAGCATTCTTTGAAGCAGCAGGAAGCACTCCCATCTGAGGGCTaGAAATCCTCCTCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRATSCLRAEHSLKQQEALPSEG*KSSSSS Trigger: AGAGGAGGAGGAGGATTTCAAGCCCTCAGATGGGAG...TGCTTCCTGCTGCTTCAAAGAATGCTCAGCCCTGAGGCAGGAAGTAGCTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS TCA 90 bp | TGGAGAAAAGAGCAGGCCTCTCAGAGCGGATGGTCTGTAGAATCATaGGTGACATGGTGTCTCTCAGGTGATCTGTGGTCTTGGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WRKEQASQSGWSVES*VTWCLSGDLWSWGG Trigger: GCCTCCCCAAGACCACAGATCACCTGAGAGACACCATGTCACTCATGATTCTACAGACCATCCGCTCTGAGAGGCCTGCTCTTTTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113889.9 |
||
| CDS CCA 90 bp | CAAAGAGCTTCCTCAGCTCCTCTTCCACCTTCTGATCTATGGGATTaGTGCAGGCCTTCTTCCATGTCTGGACTGCAGCCTCCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRASSAPLPPSDLWD*CRPSSMSGLQPPKA Trigger: AGCCTTTGGAGGCTGCAGTCCAGACATGGAAGAAGGCCTGCACCAATCCCATAGATCAGAAGGTGGAAGAGGAGCTGAGGAAGCTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CCA 90 bp | GGATGTCAAAGAGCTTCCTCAGCTCCTCTTCCACCTTCTGATCTATaGGATTGGTGCAGGCCTTCTTCCATGTCTGGACTGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCQRASSAPLPPSDL*DWCRPSSMSGLQPP Trigger: TGGAGGCTGCAGTCCAGACATGGAAGAAGGCCTGCACCAATCCCATAGATCAGAAGGTGGAAGAGGAGCTGAGGAAGCTCTTTGACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGCTCACTTGACCCAACCAATGATCTCCAAGTaGAACGTGACCTGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSDSMQDWEVPRSAHLTQPMISK*NVTWGW Trigger: CCACCCCCAGGTCACGTTCAACTTGGAGATCATTGG...TTGGGTCAAGTGAGCACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS TCA 90 bp | ACAGGACGGATGTCAAAGAGCTTCCTCAGCTCCTCTTCCACCTTCTaGTCTATGGGATTGGTGCAGGCCTTCTTCCATGTCTGGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGRMSKSFLSSSSTF*SMGLVQAFFHVWTA Trigger: TGCAGTCCAGACATGGAAGAAGGCCTGCACCAATCCCATAGATCAGAAGGTGGAAGAGGAGCTGAGGAAGCTCTTTGACATCCGTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | TTACACCCAGGGACCTTCCATGGATGTCCGCTTGACAGAGACAAAAGGAAGATGCCAATGATCTCCAAGTaGAACGTGACCTGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHPGTFHGCPLDRDKRKMPMISK*NVTWGW Trigger: CCACCCCCAGGTCACGTTCAACTTGGAGATCATTGG...CATCTTCCTTTTGTCTCTGTCAAGCGGACATCCATGGAAGGTCCCTGGGTGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCTTACACCCAGGGACCTTCCATGGATGTCCGCTTGACAGAGACAAAAGGATCAGTGTCCTCAAAGTaGACAAAGATGGCGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAYTQGPSMDVRLTETKGSVSSK*TKMALW Trigger: CCACAACGCCATCTTTGTCAACTTTGAGGACACTGA...TCCTTTTGTCTCTGTCAAGCGGACATCCATGGAAGGTCCCTGGGTGTAAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS GCA 90 bp | TCCTTCTCAGGCTTGCGCATGAGCACTCTGTCATACATGGAAACATaGTTGCCACCAGCTTCTGTGTGCACTGCCAAGTACTGGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFSGLRMSTLSYMET*LPPASVCTAKYWKS Trigger: TGACTTCCAGTACTTGGCAGTGCACACAGAAGCTGGTGGCAAGCATGTTTCCATGTATGACAGAGTGCTCATGCGCAAGCCTGAGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS GCA 90 bp | CTTCTGATCTATGGGATTGGTGCAGGCCTTCTTCCATGTCTGGACTaGAGCCTCCAAAGGCTGTTCAGGAACCTCAGTGTCCTCAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLIYGIGAGLLPCLD*SLQRLFRNLSVLKV Trigger: AACTTTGAGGACACTGAGGTTCCTGAACAGCCTTTGGAGGCTGCAGTCCAGACATGGAAGAAGGCCTGCACCAATCCCATAGATCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS-3UTR CAA 90 bp | GATGGGCAGCAACTAGAAGTGAGAAAACGCCCAGCTGAAGCTTCCTGGCAGTCAAGCAAGATCTTAAGCTaGTCAGGATGGACACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: DGQQLEVRKRPAEASWQSSKILS*SGWTLT Trigger: CGTCAGTGTCCATCCTGACAAGCTTAAGATCTTGCT...TGACTGCCAGGAAGCTTCAGCTGGGCGTTTTCTCACTTCTAGTTGCTGCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS GCA 90 bp | TCTTCCTCCTCCTCCTCCTCTTCCTCTCCAGATTCAAACATCAGCTaGTCTTTCCCACGATCAGCCTTACCTGTGTTGGAGAAAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSSSSSPDSNIS*SFPRSALPVLEKRA Trigger: TGCTCTTTTCTCCAACACAGGTAAGGCTGATCGTGGGAAAGAGCAGCTGATGTTTGAATCTGGAGAGGAAGAGGAGGAGGAGGAGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113889.9 |
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| CDS CCA 90 bp | CTCCACATTCAAATCACACAGCTGGTAGAACATCTGTCGATAGGGTaGCAGAGCCCCTTCCCGGAAGATGTAGACCGAATCCTTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHIQITQLVEHLSIG*QSPFPEDVDRILEF Trigger: AAACTCAAGGATTCGGTCTACATCTTCCGGGAAGGGGCTCTGCCACCCTATCGACAGATGTTCTACCAGCTGTGTGATTTGAATGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS-3UTR CAA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTTCCTCCTTCTCAGGCTaGCGCATGAGCACTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KQWIFNLGWLEAFGFGFASSFSG*RMSTLS Trigger: TGACAGAGTGCTCATGCGCAAGCCTGAGAAGGAGGA...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGATTCCATGCAAGACTGGGAAGTTCCCAGGAGTGCTCACTTGACCCAATCAGTGTCCTCAAAGTaGACAAAGATGGCGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSDSMQDWEVPRSAHLTQSVSSK*TKMALW Trigger: CCACAACGCCATCTTTGTCAACTTTGAGGACACTGA...TTGGGTCAAGTGAGCACTCCTGGGAACTTCCCAGTCTTGCATGGAATCAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS-3UTR CAA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTCTCCCATCTGAGGGCTaGAAATCCTCCTCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KQWIFNLGWLEAFGFGFALPSEG*KSSSSS Trigger: AGAGGAGGAGGAGGATTTCAAGCCCTCAGATGGGAG...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS TCA 90 bp | AAGCTTGTCAGGATGGACACTGACGTTAGACTTGACAGCATTTCGTaGCCAAACAGGACGGATGTCAAAGAGCTTCCTCAGCTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLVRMDTDVRLDSIS*PNRTDVKELPQLLF Trigger: GAAGAGGAGCTGAGGAAGCTCTTTGACATCCGTCCTGTTTGGTCACGAAATGCTGTCAAGTCTAACGTCAGTGTCCATCCTGACAAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS TCA 90 bp | CACCCATCTCTCTCTGTGCACACAGTCTCTGTCCCATCGTTTCGGTaGACAATTTTCTGCAACTCCTCCACATTCAAATCACACAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPSLSVHTVSVPSFR*TIFCNSSTFKSHSW Trigger: CCAGCTGTGTGATTTGAATGTGGAGGAGTTGCAGAAAATTGTTCACCGAAACGATGGGACAGAGACTGTGTGCACAGAGAGAGATGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS-3UTR CAA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTTCAGCCTTACCTGTGTaGGAGAAAAGAGCAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQWIFNLGWLEAFGFGFASALPV*EKRAGL Trigger: GAGGCCTGCTCTTTTCTCCAACACAGGTAAGGCTGA...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113889.9 |
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| CDS-3UTR CAA 90 bp | TGGGAAGTTCCCAGGAGTGCTCACTTGACCCAAATCAAACAATGGATCTTCAATAGCAAGATCTTAAGCTaGTCAGGATGGACACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: WEVPRSAHLTQIKQWIFNSKILS*SGWTLT Trigger: CGTCAGTGTCCATCCTGACAAGCTTAAGATCTTGCT...ATTGAAGATCCATTGTTTGATTTGGGTCAAGTGAGCACTCCTGGGAACTTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS GCA 90 bp | TCTGTCATACATGGAAACATGCTTGCCACCAGCTTCTGTGTGCACTaGCAAGTACTGGAAGTCAGACATTCCCTGGAATTTGTAAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVIHGNMLATSFCVH*QVLEVRHSLEFVNC Trigger: ACAATTTACAAATTCCAGGGAATGTCTGACTTCCAGTACTTGGCAGTGCACACAGAAGCTGGTGGCAAGCATGTTTCCATGTATGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CCA 90 bp | TCCACAGCGGATTCGAAAATCAAGGACTTGATAAATCTTGGCATCTaGGTGTTTTCGAGGGTCATAGCCAAATCGAATCCACAAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: STADSKIKDLINLGI*VFSRVIAKSNPQAS Trigger: AGAAGCTTGTGGATTCGATTTGGCTATGACCCTCGAAAACACCCAGATGCCAAGATTTATCAAGTCCTTGATTTTCGAATCCGCTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS-3UTR CAA 90 bp | AAACAATGGATCTTCAATCTCGGCTGGCTCGAGGCATTTGGCTTTGGATTTGCTTCGAAAATCAAGGACTaGATAAATCTTGGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQWIFNLGWLEAFGFGFASKIKD*INLGIW Trigger: CCAGATGCCAAGATTTATCAAGTCCTTGATTTTCGA...AGCAAATCCAAAGCCAAATGCCTCGAGCCAGCCGAGATTGAAGATCCATTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CCA 90 bp | ATTTCATTCCACAGCGGATTCGAAAATCAAGGACTTGATAAATCTTaGCATCTGGGTGTTTTCGAGGGTCATAGCCAAATCGAATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: ISFHSGFENQGLDKS*HLGVFEGHSQIEST Trigger: TGTGGATTCGATTTGGCTATGACCCTCGAAAACACCCAGATGCCAAGATTTATCAAGTCCTTGATTTTCGAATCCGCTGTGGAATGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CCA 72 bp | ACACCAAGCGCCGTTCCCGCCGCAGGTCCACAGGGATaGCGGCCTTCGGGTCCGCATCCGGCTCCGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TPSAVPAAGPQG*RPSGPHPAPPP Trigger: CGGCGGCGGAGCCGGATGCGGACCCGAAGGCCGCCATCCCTGTGGACCTGCGGCGGGAACGGCGCTTGGTGT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 ENSMUST00000139553.2 |
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| CDS CAA 72 bp | GGTGGGCCTCGTCTCCCAGGACACCTCTCCGACGCCTaGTTCTTTTCCGGATCCGGAGCAGCAGGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGPRLPGHLSDA*FFSGSGAAGCW Trigger: CCAGCAGCCTGCTGCTCCGGATCCGGAAAAGAACAAGGCGTCGGAGAGGTGTCCTGGGAGACGAGGCCCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CCA 72 bp | AGACGCTTTCCTCGCCGCCCAGGGTCTGTAGCATCTTaGCCTCGTTACGTACTACGCCCGGGTACTCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: RRFPRRPGSVAS*PRYVLRPGTPR Trigger: GCGTGGAGTACCCGGGCGTAGTACGTAACGAGGCCAAGATGCTACAGACCCTGGGCGGCGAGGAAAGCGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 ENSMUST00000139553.2 |
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| CDS CAA 72 bp | GAGACGCTTTCCTCGCCGCCCAGGGTCTGTAGCATCTaGGCCTCGTTACGTACTACGCCCGGGTACTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: ETLSSPPRVCSI*ASLRTTPGYST Trigger: CGTGGAGTACCCGGGCGTAGTACGTAACGAGGCCAAGATGCTACAGACCCTGGGCGGCGAGGAAAGCGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 ENSMUST00000139553.2 |
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| CDS CAA 90 bp | CAACCTCGAGAGACGCTTTCCTCGCCGCCCAGGGTCTGTAGCATCTaGGCCTCGTTACGTACTACGCCCGGGTACTCCACGCACACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: QPRETLSSPPRVCSI*ASLRTTPGYSTHTK Trigger: CTTGGTGTGCGTGGAGTACCCGGGCGTAGTACGTAACGAGGCCAAGATGCTACAGACCCTGGGCGGCGAGGAAAGCGTCTCTCGAGGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139553.2 |
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| CDS GCA 72 bp | TTCCGTGGGCCATCAGTTCCTGATGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTGCCAGGCTGGTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FRGPSVPDGPRP*FRSCMVPGWLD Trigger: ATCCAACCAGCCTGGCACCATGCATGACCTGAAGCAGGGCCTGGGCCCATCAGGAACTGATGGCCCACGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CCA 72 bp | ATGCCAATGATCTCCAAGTTGAACGTGACCTGGGGGTaGGCCTCGTCTCCCAGGACACCTCTCCGACGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: MPMISKLNVTWG*ASSPRTPLRRL Trigger: AAGGCGTCGGAGAGGTGTCCTGGGAGACGAGGCCCACCCCCAGGTCACGTTCAACTTGGAGATCATTGGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS GCA 72 bp | TCAGTTCCTGATGGGCCCAGGCCCTGCTTCAGGTCATaGATGGTGCCAGGCTGGTTGGATGTCTTCTTGACG | + |
|
Preference number: 6 (lower is better) Translates to: SVPDGPRPCFRS*MVPGWLDVFLT Trigger: CGTCAAGAAGACATCCAACCAGCCTGGCACCATGCATGACCTGAAGCAGGGCCTGGGCCCATCAGGAACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CAA 90 bp | GGCTGTTCAGGAACCTCAGTGTCCTCAAAGTTGACAAAGATGGCGTaGTGGGGGCGCCGGGCTCTACTCAGTCCAATCAGGTTCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GCSGTSVSSKLTKMA*WGRRALLSPIRFSP Trigger: AGGGGAGAACCTGATTGGACTGAGTAGAGCCCGGCGCCCCCACAACGCCATCTTTGTCAACTTTGAGGACACTGAGGTTCCTGAACAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CAA 90 bp | ACTGCAGCCTCCAAAGGCTGTTCAGGAACCTCAGTGTCCTCAAAGTaGACAAAGATGGCGTTGTGGGGGCGCCGGGCTCTACTCAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TAASKGCSGTSVSSK*TKMALWGRRALLSP Trigger: TGGACTGAGTAGAGCCCGGCGCCCCCACAACGCCATCTTTGTCAACTTTGAGGACACTGAGGTTCCTGAACAGCCTTTGGAGGCTGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS TCA 72 bp | GCGCCGGGCTCTACTCAGTCCAATCAGGTTCTCCCCTaGGATGGTGGGATTATGATAGCCTTCTCGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APGSTQSNQVLP*DGGIMIAFSVL Trigger: CAGCACCGAGAAGGCTATCATAATCCCACCATCTCAGGGGAGAACCTGATTGGACTGAGTAGAGCCCGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS TCA 72 bp | CCAAAGGCTGTTCAGGAACCTCAGTGTCCTCAAAGTTaGCAAAGATGGCGTTGTGGGGGCGCCGGGCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: PKAVQEPQCPQS*QRWRCGGAGLY Trigger: GTAGAGCCCGGCGCCCCCACAACGCCATCTTTGTCAACTTTGAGGACACTGAGGTTCCTGAACAGCCTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CAA 72 bp | GGAACCTCAGTGTCCTCAAAGTTGACAAAGATGGCGTaGTGGGGGCGCCGGGCTCTACTCAGTCCAATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTSVSSKLTKMA*WGRRALLSPIR Trigger: CCTGATTGGACTGAGTAGAGCCCGGCGCCCCCACAACGCCATCTTTGTCAACTTTGAGGACACTGAGGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CCA 72 bp | ACCTCAGTGTCCTCAAAGTTGACAAAGATGGCGTTGTaGGGGCGCCGGGCTCTACTCAGTCCAATCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSVSSKLTKMAL*GRRALLSPIRF Trigger: GAACCTGATTGGACTGAGTAGAGCCCGGCGCCCCCACAACGCCATCTTTGTCAACTTTGAGGACACTGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS GCA 72 bp | TATGGGATTGGTGCAGGCCTTCTTCCATGTCTGGACTaGAGCCTCCAAAGGCTGTTCAGGAACCTCAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YGIGAGLLPCLD*SLQRLFRNLSV Trigger: GACACTGAGGTTCCTGAACAGCCTTTGGAGGCTGCAGTCCAGACATGGAAGAAGGCCTGCACCAATCCCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
||
| CDS CCA 72 bp | TCCTCAGCTCCTCTTCCACCTTCTGATCTATGGGATTaGTGCAGGCCTTCTTCCATGTCTGGACTGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSAPLPPSDLWD*CRPSSMSGLQP Trigger: AGGCTGCAGTCCAGACATGGAAGAAGGCCTGCACCAATCCCATAGATCAGAAGGTGGAAGAGGAGCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS TCA 72 bp | GAGCAGGCCTCTCAGAGCGGATGGTCTGTAGAATCATaGGTGACATGGTGTCTCTCAGGTGATCTGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: EQASQSGWSVES*VTWCLSGDLWS Trigger: AGACCACAGATCACCTGAGAGACACCATGTCACTCATGATTCTACAGACCATCCGCTCTGAGAGGCCTGCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113889.9 |
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| CDS GCA 72 bp | GGCTTGCGCATGAGCACTCTGTCATACATGGAAACATaGTTGCCACCAGCTTCTGTGTGCACTGCCAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: GLRMSTLSYMET*LPPASVCTAKY Trigger: GTACTTGGCAGTGCACACAGAAGCTGGTGGCAAGCATGTTTCCATGTATGACAGAGTGCTCATGCGCAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS GCA 72 bp | TCCTCCTCCTCTTCCTCTCCAGATTCAAACATCAGCTaGTCTTTCCCACGATCAGCCTTACCAGGCCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSPDSNIS*SFPRSALPGLS Trigger: TGAGAGGCCTGGTAAGGCTGATCGTGGGAAAGAGCAGCTGATGTTTGAATCTGGAGAGGAAGAGGAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028157.9 |
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| CDS CCA 72 bp | AGAGCTTCCTCAGCTCCTCTTCCACCTTCTGATCTATaGGATTGGTGCAGGCCTTCTTCCATGTCTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: RASSAPLPPSDL*DWCRPSSMSGL Trigger: CAGTCCAGACATGGAAGAAGGCCTGCACCAATCCCATAGATCAGAAGGTGGAAGAGGAGCTGAGGAAGCTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CAA 90 bp | TTCTCAGGCTTGCGCATGAGCACTCTGTCATACATGGAAACATGCTaGCCACCAGCTTCTGTGTGCACTGCCAAGTACTGGAAGTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: FSGLRMSTLSYMETC*PPASVCTAKYWKSD Trigger: GTCTGACTTCCAGTACTTGGCAGTGCACACAGAAGCTGGTGGCAAGCATGTTTCCATGTATGACAGAGTGCTCATGCGCAAGCCTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS TCA 72 bp | TACCAGGCCTCTCAGAGCGGATGGTCTGTAGAATCATaGGTGACATGGTGTCTCTCAGGTGATCTGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: YQASQSGWSVES*VTWCLSGDLWS Trigger: AGACCACAGATCACCTGAGAGACACCATGTCACTCATGATTCTACAGACCATCCGCTCTGAGAGGCCTGGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028157.9 |
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| CDS GCA 72 bp | TCCTCCTCCTCTTCCTCTCCAGATTCAAACATCAGCTaGTCTTTCCCACGATCAGCCTTACCTGTGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSPDSNIS*SFPRSALPVLE Trigger: CTCCAACACAGGTAAGGCTGATCGTGGGAAAGAGCAGCTGATGTTTGAATCTGGAGAGGAAGAGGAGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113889.9 |
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| CDS GCA 72 bp | TCATACATGGAAACATGCTTGCCACCAGCTTCTGTGTaGACTGCCAAGTACTGGAAGTCAGACATTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SYMETCLPPASV*TAKYWKSDIPW Trigger: CCAGGGAATGTCTGACTTCCAGTACTTGGCAGTGCACACAGAAGCTGGTGGCAAGCATGTTTCCATGTATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS TCA 72 bp | AGGATGGACACTGACGTTAGACTTGACAGCATTTCGTaGCCAAACAGGACGGATGTCAAAGAGCTTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RMDTDVRLDSIS*PNRTDVKELPQ Trigger: CTGAGGAAGCTCTTTGACATCCGTCCTGTTTGGTCACGAAATGCTGTCAAGTCTAACGTCAGTGTCCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS GCA 72 bp | CATGGAAACATGCTTGCCACCAGCTTCTGTGTGCACTaGCAAGTACTGGAAGTCAGACATTCCCTGGAATTT | + |
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Preference number: 6 (lower is better) Translates to: HGNMLATSFCVH*QVLEVRHSLEF Trigger: AAATTCCAGGGAATGTCTGACTTCCAGTACTTGGCAGTGCACACAGAAGCTGGTGGCAAGCATGTTTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CAA 90 bp | GGAAGCAAGATCTTAAGCTTGTCAGGATGGACACTGACGTTAGACTaGACAGCATTTCGTGACCAAACAGGACGGATGTCAAAGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSKILSLSGWTLTLD*TAFRDQTGRMSKSF Trigger: GAAGCTCTTTGACATCCGTCCTGTTTGGTCACGAAATGCTGTCAAGTCTAACGTCAGTGTCCATCCTGACAAGCTTAAGATCTTGCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS TCA 72 bp | CTCTCTGTGCACACAGTCTCTGTCCCATCGTTTCGGTaGACAATTTTCTGCAACTCCTCCACATTCAAATCA | + |
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Preference number: 6 (lower is better) Translates to: LSVHTVSVPSFR*TIFCNSSTFKS Trigger: TGATTTGAATGTGGAGGAGTTGCAGAAAATTGTTCACCGAAACGATGGGACAGAGACTGTGTGCACAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CAA 72 bp | ATCTTAAGCTTGTCAGGATGGACACTGACGTTAGACTaGACAGCATTTCGTGACCAAACAGGACGGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: ILSLSGWTLTLD*TAFRDQTGRMS Trigger: TGACATCCGTCCTGTTTGGTCACGAAATGCTGTCAAGTCTAACGTCAGTGTCCATCCTGACAAGCTTAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CCA 72 bp | CACAGCGGATTCGAAAATCAAGGACTTGATAAATCTTaGCATCTGGGTGTTTTCGAGGGTCATAGCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: HSGFENQGLDKS*HLGVFEGHSQI Trigger: GATTTGGCTATGACCCTCGAAAACACCCAGATGCCAAGATTTATCAAGTCCTTGATTTTCGAATCCGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CAA 90 bp | GCCATAACCGTATTTCATTCCACAGCGGATTCGAAAATCAAGGACTaGATAAATCTTGGCATCTGGGTGTTTTCGAGGGTCATAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: AITVFHSTADSKIKD*INLGIWVFSRVIAK Trigger: TTTGGCTATGACCCTCGAAAACACCCAGATGCCAAGATTTATCAAGTCCTTGATTTTCGAATCCGCTGTGGAATGAAATACGGTTATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CAA 72 bp | GTATTTCATTCCACAGCGGATTCGAAAATCAAGGACTaGATAAATCTTGGCATCTGGGTGTTTTCGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: VFHSTADSKIKD*INLGIWVFSRV Trigger: GACCCTCGAAAACACCCAGATGCCAAGATTTATCAAGTCCTTGATTTTCGAATCCGCTGTGGAATGAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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| CDS CCA 72 bp | GATTCGAAAATCAAGGACTTGATAAATCTTGGCATCTaGGTGTTTTCGAGGGTCATAGCCAAATCGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: DSKIKDLINLGI*VFSRVIAKSNP Trigger: TGGATTCGATTTGGCTATGACCCTCGAAAACACCCAGATGCCAAGATTTATCAAGTCCTTGATTTTCGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028157.9 ENSMUST00000113889.9 |
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