Pregenerated sensors for GTF3C3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041303Ensembl transcript IDs: ENSMUST00000041638.8
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTACATATGAAGCAAGCAGGCAGTCTACAGCTGAGCTACATCCCCTaGTTCAAAGCAGTTGTAATGGTAGCAAGCAGTGATGACAGTACC | + |
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Preference number: 1 (lower is better) Translates to: VHMKQAGSLQLSYIP*FKAVVMVASSDDST Trigger: GGTACTGTCATCACTGCTTGCTACCATTACAACTGCTTTGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCCTGCTTGCTTCATATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR TCA 90 bp | CTCCAGTGGGAAGCCAAGGTTGTTATGCCTTGGAACATTGGGCTTTaGATTAAGCCTGATTCCAAGGTTTATTATCTGAAATTAACATAC | + |
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Preference number: 1 (lower is better) Translates to: LQWEAKVVMPWNIGL*IKPDSKVYYLKLTY Trigger: GTATGTTAATTTCAGATAATAAACCTTGGAATCAGGCTTAATTCAAAGCCCAATGTTCCAAGGCATAACAACCTTGGCTTCCCACTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTCAGGCAGTCTACAGCTaGGCTACATCCCCTGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LNFLELESMTVTEHDHPFQAVYS*ATSPAS Trigger: TGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCCTG...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCTTTAATCCTGGCACTTaGAAGGCAGAGGTAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SPLYFDPRSHMVFLYNWIFNPGT*KAEVGL Trigger: CAGGCCTACCTCTGCCTTCCAAGTGCCAGGATTAAA...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTCTGAGCTACATCCCCTaGTTCAAAGCAGTTGTAATG | + |
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Preference number: 2 (lower is better) Translates to: WEELLKSPLYFDPRSHMVLSYIP*FKAVVM Trigger: CATTACAACTGCTTTGAAGCAGGGGATGTAGCTCAG...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR GCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCCACAGCTTCTCGCTCTaGAGAGCTTTGCCATCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SPLYFDPRSHMVFLYNWIHSFSL*RALPSK Trigger: TTTAGATGGCAAAGCTCTGCAGAGCGAGAAGCTGTG...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCAATTTTCCAAAGGCTTaGATCTGGGGCCTTGTACAT | + |
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Preference number: 2 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRNFPKA*IWGLVH Trigger: ATGTACAAGGCCCCAGATTCAAGCCTTTGGAAAATT...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCTTATCCACAAAAACTTaGGTTGCTTCAGGGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: SPLYFDPRSHMVFLYNWILSTKT*VASGQM Trigger: CATCTGCCCTGAAGCAACCCAAGTTTTTGTGGATAA...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTAGTACTAAACTTTCTTaGACTGGAAAGCATGACAGT | + |
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Preference number: 2 (lower is better) Translates to: WEELLKSPLYFDPRSHMVSTKLS*TGKHDS Trigger: ACTGTCATGCTTTCCAGTTCAAGAAAGTTTAGTACT...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTGAGTCCAACTTCCTTTaGTGTGTATTTGAACATTGC | + |
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Preference number: 2 (lower is better) Translates to: LNFLELESMTVTEHDHPFESNFL*CVFEHC Trigger: GCAATGTTCAAATACACATCAAAGGAAGTTGGACTC...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR CAA 90 bp | ACTCCCAGGAAGACATTTGTCAAGGATCTCGTTTTAGGACTTTGTTaGGCTATAAAAGTATGTAGAACCTCTTTAATGATGGGACACGTT | + |
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Preference number: 2 (lower is better) Translates to: TPRKTFVKDLVLGLC*AIKVCRTSLMMGHV Trigger: AACGTGTCCCATCATTAAAGAGGTTCTACATACTTTTATAGCCAAACAAAGTCCTAAAACGAGATCCTTGACAAATGTCTTCCTGGGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR TCA 72 bp | TCGTGCGTGCATTGCTCATCGGATCTCTGGATGATCTaGGATAAAAGCTGGATGAGGCACAGCTTCTCGCTC | + |
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Preference number: 3 (lower is better) Translates to: SCVHCSSDLWMI*DKSWMRHSFSL Trigger: GAGCGAGAAGCTGTGCCTCATCCAGCTTTTATCTCAGATCATCCAGAGATCCGATGAGCAATGCACGCACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR GCA 72 bp | AAGCAAGCAGGCAGTCTACAGCTGAGCTACATCCCCTaGTTCAAAGCAGTTGTAATGGTAGCAAGCAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: KQAGSLQLSYIP*FKAVVMVASSD Trigger: ATCACTGCTTGCTACCATTACAACTGCTTTGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCCTGCTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR GCA 72 bp | CCATCCCTTTTCTCCAGTGGGAAGCCAAGGTTGTTATaGCTTGGAACATTGGGCTTTGAATTAAGCCTGATT | + |
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Preference number: 3 (lower is better) Translates to: PSLFSSGKPRLL*LGTLGFELSLI Trigger: AATCAGGCTTAATTCAAAGCCCAATGTTCCAAGGCATAACAACCTTGGCTTCCCACTGGAGAAAAGGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR TCA 72 bp | AGTGGTGACTATCTCAGTAGTGTACTCTGTAATGCCTaGAGGACAAACCACACTGTCTCCAATATTACCAGC | + |
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Preference number: 3 (lower is better) Translates to: SGDYLSSVLCNA*RTNHTVSNITS Trigger: GCTGGTAATATTGGAGACAGTGTGGTTTGTCCTTCAGGCATTACAGAGTACACTACTGAGATAGTCACCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR CAA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCCAATTTTCCAAAGGCTaGAATCTGGGGCCTTGTACA | + |
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Preference number: 3 (lower is better) Translates to: SPLYFDPRSHMVFLYNWIQFSKG*NLGPCT Trigger: TGTACAAGGCCCCAGATTCAAGCCTTTGGAAAATTG...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR CAA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTTCGCTCTGCAGAGCTTaGCCATCTAAACTCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: ISLNPVNTSFHISNFPLFSLCRA*PSKLPG Trigger: TCCTGGGAGTTTAGATGGCAAAGCTCTGCAGAGCGA...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR TCA 72 bp | AGAGTGGGAAGAACTCCTAAAGTCGCCATTGTATTTTaGTCCTCGGTCTCACATGGTTTTCCTTTACAACTG | + |
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Preference number: 3 (lower is better) Translates to: RVGRTPKVAIVF*SSVSHGFPLQL Trigger: CAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR-3UTR CAA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTAGTGGGAAGCCAAGGTaGTTATGCCTTGGAACATTG | + |
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Preference number: 3 (lower is better) Translates to: ISLNPVNTSFHISNFPLFSGKPR*LCLGTL Trigger: CAATGTTCCAAGGCATAACAACCTTGGCTTCCCACT...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR TCA 72 bp | GAAGCCAAGGTTGTTATGCCTTGGAACATTGGGCTTTaGATTAAGCCTGATTCCAAGGTTTATTATCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EAKVVMPWNIGL*IKPDSKVYYLK Trigger: TTTCAGATAATAAACCTTGGAATCAGGCTTAATTCAAAGCCCAATGTTCCAAGGCATAACAACCTTGGCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| 3UTR CAA 72 bp | AGCTGGATGAGGCACAGCTTCTCGCTCTGCAGAGCTTaGCCATCTAAACTCCCAGGAAGACATTTGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SWMRHSFSLCRA*PSKLPGRHLSR Trigger: CCTTGACAAATGTCTTCCTGGGAGTTTAGATGGCAAAGCTCTGCAGAGCGAGAAGCTGTGCCTCATCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | GGCAGTCTACAGCTGAGCTACATCCCCTGCTTCAAAGCAGTTGTAATGGTAGCACACAAATACATCGCCTaGAGTGGGTTGCTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GSLQLSYIPCFKAVVMVAHKYIA*SGLLCC Trigger: ACAGCAGAGCAACCCACTGCAGGCGATGTATTTGTG...TGCTACCATTACAACTGCTTTGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTACCCTCGACCACAAGTaGAGGGAGTGCCAGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: WEELLKSPLYFDPRSHMVTLDHK*RECQSL Trigger: AAGGCTCTGGCACTCCCTCCACTTGTGGTCGAGGGT...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | GGCAGTCTACAGCTGAGCTACATCCCCTGCTTCAAAGCAGTTGTAATGGTAGCAATACATCGCCTGCAGTaGGTTGCTCTGCTGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GSLQLSYIPCFKAVVMVAIHRLQ*VALLFL Trigger: AAGAAACAGCAGAGCAACCCACTGCAGGCGATGTAT...TGCTACCATTACAACTGCTTTGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTGACCTCTCAGGGCTCTaGGGAGTTTACTCCGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFDLSGL*GVYSEA Trigger: GGCCTCGGAGTAAACTCCCCAGAGCCCTGAGAGGTC...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | ACCTCTTTAATGATGGGACACGTTATCCACAAAAACTTGGGTTGCTTCAGGGCAGGGGCTCAAGGATGTTaGGATGTACAAGGCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: TSLMMGHVIHKNLGCFRAGAQGC*DVQGRP Trigger: TGGTCTGCCTTGTACATCTCAACATCCTTGAGCCCC...TGCCCTGAAGCAACCCAAGTTTTTGTGGATAACGTGTCCCATCATTAAAGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTGCAGTGGGTTGCTCTaGTGTTTCTTCCTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: WEELLKSPLYFDPRSHMVCSGLL*CFFLLL Trigger: GAGGAGGAGGAAGAAACAGCAGAGCAACCCACTGCA...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCTCAGGACGGCCTAGCTaGTGCTGCAGGATGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: SPLYFDPRSHMVFLYNWISGRPS*CCRMES Trigger: ACTTTCCATCCTGCAGCAGCAGCTAGGCCGTCCTGA...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTGGACGGCCTAGCTGCTaGTGCAGGATGGAAAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFGRPSC*CRMESE Trigger: TTCACTTTCCATCCTGCAGCAGCAGCTAGGCCGTCC...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTCACAAGTGGAGGGAGTaGCAGAGCCTTCTGGTAATA | + |
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Preference number: 4 (lower is better) Translates to: WEELLKSPLYFDPRSHMVHKWRE*QSLLVI Trigger: TATTACCAGAAGGCTCTGGCACTCCCTCCACTTGTG...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCCCTGCTGTGCAGCATTaGCATCTTGGGCTAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRPAVQH*HLGLRC Trigger: ACACCTTAGCCCAAGATGCCAATGCTGCACAGCAGG...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCCTGGTAATAGTGGATTaGAAGGTGTGTCAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SPLYFDPRSHMVFLYNWILVIVD*KVCQPQ Trigger: CTGGGGCTGACACACCTTGCAATCCACTATTACCAG...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTAAGCTTTTGAGCCATTaGAGTGTTCCCACTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: WEELLKSPLYFDPRSHMVKLLSH*SVPTAL Trigger: CAGAGCAGTGGGAACACTGCAATGGCTCAAAAGCTT...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTGGCAAGTGTAGAGAATaGCTCATAAGCCAAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: WEELLKSPLYFDPRSHMVGKCRE*LISQRS Trigger: GCTCCTTTGGCTTATGAGCCATTCTCTACACTTGCC...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | GGCAGTCTACAGCTGAGCTACATCCCCTGCTTCAAAGCAGTTGTAATGGTAGCAGATATCAAACAAACTTaGGCTCTATTCATCGCAACC | + |
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Preference number: 4 (lower is better) Translates to: GSLQLSYIPCFKAVVMVADIKQT*ALFIAT Trigger: GGTTGCGATGAATAGAGCCCAAGTTTGTTTGATATC...TGCTACCATTACAACTGCTTTGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | ACCTCTTTAATGATGGGACACGTTATCCACAAAAACTTGGGTTGCTTCAGGGCAGAAGCAAAGACTTTGTaGACTGACTTACTCACCCCA | + |
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Preference number: 4 (lower is better) Translates to: TSLMMGHVIHKNLGCFRAEAKTL*TDLLTP Trigger: TGGGGTGAGTAAGTCAGTTCACAAAGTCTTTGCTTC...TGCCCTGAAGCAACCCAAGTTTTTGTGGATAACGTGTCCCATCATTAAAGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCAGAGACATTTCTaGCAGCCTAACCCATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: WEELLKSPLYFDPRSHMVFQRHF*QPNPFF Trigger: GAAGAATGGGTTAGGCTGGCAGAAATGTCTCTGGAA...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | GGCAGTCTACAGCTGAGCTACATCCCCTGCTTCAAAGCAGTTGTAATGGTAGCATTCATAGTAACTCTTTaGCATATCTCTAGCCAACTG | + |
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Preference number: 4 (lower is better) Translates to: GSLQLSYIPCFKAVVMVAFIVTL*HISSQL Trigger: CAGTTGGCTAGAGATATGGCAAAGAGTTACTATGAA...TGCTACCATTACAACTGCTTTGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | ACCTCTTTAATGATGGGACACGTTATCCACAAAAACTTGGGTTGCTTCAGGGCATTGGCGTCTTTGTCCTaGGATTTGGCAGAGTCAATT | + |
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Preference number: 4 (lower is better) Translates to: TSLMMGHVIHKNLGCFRALASLS*DLAESI Trigger: AATTGACTCTGCCAAATCCCAGGACAAAGACGCCAA...TGCCCTGAAGCAACCCAAGTTTTTGTGGATAACGTGTCCCATCATTAAAGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTTGTCTGGATCATACATaGGTTCCAGCGCTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFCLDHT*VPALPE Trigger: CTCTGGAAGCGCTGGAACCCATGTATGATCCAGACA...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCTCTTGGTTTCACGGTTaGGAACCATCTCCAACACAA | + |
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Preference number: 4 (lower is better) Translates to: SPLYFDPRSHMVFLYNWISWFHG*EPSPTQ Trigger: TTGTGTTGGAGATGGTTCTCAACCGTGAAACCAAGA...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCTTCTCCATGTCACCTTaGTCCTCGTATATCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: SPLYFDPRSHMVFLYNWIFSMSP*SSYIMA Trigger: TGCCATGATATACGAGGATCAAGGTGACATGGAGAA...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | ACCTCTTTAATGATGGGACACGTTATCCACAAAAACTTGGGTTGCTTCAGGGCACAACTCAAACTGCAATaGTTTCTCCATGTCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: TSLMMGHVIHKNLGCFRAQLKLQ*FLHVTL Trigger: CAAGGTGACATGGAGAAATCATTGCAGTTTGAGTTG...TGCCCTGAAGCAACCCAAGTTTTTGTGGATAACGTGTCCCATCATTAAAGAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | AGTGATGACAGTACCATTTTTATCATCAAGAACAATGAGGTCCCGTTAGAAGATCCATCAGCTTCACCGTaGTGTCTATTGGCACGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SDDSTIFIIKNNEVPLEDPSASP*CLLARC Trigger: ACAGCGTGCCAATAGACATCACGGTGAAGCTGATGG...ATCTTCTAACGGGACCTCATTGTTCTTGATGATAAAAATGGTACTGTCATCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCTCGGCAAGACACTCGTaGGTACAGCAAATATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SPLYFDPRSHMVFLYNWISARHS*VQQILL Trigger: AAGCAATATTTGCTGTACTCACGAGTGTCTTGCCGA...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTCGGAGACAGAATCGATaGTGTCTTACATCTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFRRQNR*CLTSWE Trigger: CTCCCAAGATGTAAGACATCATCGATTCTGTCTCCG...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTCCGAAGCCAAACCACTaGGAGGTTGTATCTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFPKPNH*EVVSFR Trigger: TCTGAAAGATACAACCTCGCAGTGGTTTGGCTTCGG...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCCTTTGTCCTGGGATTTaGCAGAGTCAATTCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRLCPGI*QSQFLM Trigger: CATCAGGAATTGACTCTGCCAAATCCCAGGACAAAG...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCGCTGCTGCTGCAGGATaGAAAGTGAAATTCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRAAAAG*KVKFLH Trigger: ATGCAAGAATTTCACTTTCCATCCTGCAGCAGCAGC...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCAGCTTTATTCTCTTCTaGGGTGCCTTCTTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRSFILF*GAFFQS Trigger: ACTTTGGAAGAAGGCACCTCAGAAGAGAATAAAGCT...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | AGTGATGACAGTACCATTTTTATCATCAAGAACAATGAGGTCCCGTTAGAAGATCGGCCTAGCTGCTGCTaGAGGATGGAAAGTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SDDSTIFIIKNNEVPLEDRPSCC*RMESEI Trigger: AATTTCACTTTCCATCCTGCAGCAGCAGCTAGGCCG...ATCTTCTAACGGGACCTCATTGTTCTTGATGATAAAAATGGTACTGTCATCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCATGTTTCTCCTTCATTaGCGTCTTTGTCCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRMFLLH*RLCPGI Trigger: AATCCCAGGACAAAGACGCCAATGAAGGAGAAACAT...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTTGCATCCAAATGGAGTaGAGCCAGATCAACCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFCIQME*SQINHF Trigger: AAAGTGGTTGATCTGGCTCCACTCCATTTGGATGCA...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTCAACCTTTAAAAGCATaGCGAGCATGGTTAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFQPLKA*RAWLAR Trigger: CCTTGCTAACCATGCTCGCCATGCTTTTAAAGGTTG...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTTAATGATGGGACACGTTATCCACAAAAACTTGGGTTGCTTCAGGGCACACTCAAGGTATATATaGCCTTTAAGAGAAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLMMGHVIHKNLGCFRAHSRYI*PLREGS Trigger: GGAACCTTCTCTTAAAGGCCATATATACCTTGAGTG...TGCCCTGAAGCAACCCAAGTTTTTGTGGATAACGTGTCCCATCATTAAAGAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| 3UTR CAA 72 bp | TTTAATGATGGGACACGTTATCCACAAAAACTTGGGTaGCTTCAGGGCAGATGTCACTCATTTTTAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FNDGTRYPQKLG*LQGRCHSFLAQ Trigger: CTGAGCTAAAAATGAGTGACATCTGCCCTGAAGCAACCCAAGTTTTTGTGGATAACGTGTCCCATCATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR TCA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTCTGTTCATAAAGGCTTaGTCTCTCCCACAGGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: ISLNPVNTSFHISNFPLFLFIKA*SLPQVT Trigger: CGTTACCTGTGGGAGAGATCAAGCCTTTATGAACAG...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR TCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTCTGCAGGATGGAAAGTaGAATTCTTGCATCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFLQDGK*NSCIQM Trigger: CATTTGGATGCAAGAATTTCACTTTCCATCCTGCAG...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR TCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCGAGTGCATGGTAACTTaGTTGAAAATATTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRECMVT*LKIFHS Trigger: GCTGTGGAATATTTTCAATCAAGTTACCATGCACTC...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR TCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCGTCCAAGTGCATGTTTaGAACTACCAGATACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRVQVHV*NYQIQM Trigger: CATTTGTATCTGGTAGTTTCAAACATGCACTTGGAC...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR GCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCCACATACTTCTGAGATaGCATGTGAATAAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLYFDPRSHMVFLYNWIHILLR*HVNKGE Trigger: CTCACCTTTATTCACATGGCATCTCAGAAGTATGTG...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTTAATGATGGGACACGTTATCCACAAAAACTTGGGTTGCTTCAGGGCAAATAGAGTAGAACGATaGAGCAGTAATTTCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLMMGHVIHKNLGCFRANRVER*SSNFSS Trigger: GGAACTGAAATTACTGCTCCATCGTTCTACTCTATT...TGCCCTGAAGCAACCCAAGTTTTTGTGGATAACGTGTCCCATCATTAAAGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTTAATGATGGGACACGTTATCCACAAAAACTTGGGTTGCTTCAGGGCAAAAATATTCCACAGCTaGGGCTTATTGACATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLMMGHVIHKNLGCFRAKIFHS*GLLTFS Trigger: GGAAAATGTCAATAAGCCCCAGCTGTGGAATATTTT...TGCCCTGAAGCAACCCAAGTTTTTGTGGATAACGTGTCCCATCATTAAAGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTCAGAGCATGATTATCTaGGTTTTTCAGCATCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFQSMII*VFQHQT Trigger: CGTCTGATGCTGAAAAACCCAGATAATCATGCTCTG...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCAAGGAGCTTGTCTTATaGTTTCCATGCACATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SPLYFDPRSHMVFLYNWIKELVL*FPCTSI Trigger: TATTGATGTGCATGGAAATCATAAGACAAGCTCCTT...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR GCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCACAAAAGATTTAAAATaGGCCTATAGCCATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRTKDLK*AYSHPW Trigger: CCATGGATGGCTATAGGCGCATTTTAAATCTTTTGT...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCATATCTCTAGCCAACTaGATAAAACGTTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRISLAN*IKRSPS Trigger: TGATGGAGAACGTTTTATGCAGTTGGCTAGAGATAT...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATGACAGTACCATTTTTATCATCAAGAACAATGAGGTCCCGTTAGAAGATGCCTATAGCCATCCATaGCCATTTTATGATCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDDSTIFIIKNNEVPLEDAYSHP*PFYDHP Trigger: TGGGTGATCATAAAATGGCCATGGATGGCTATAGGC...ATCTTCTAACGGGACCTCATTGTTCTTGATGATAAAAATGGTACTGTCATCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTCTTCGTAAATCTAACTaGTCAACTTCTATACCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNFLELESMTVTEHDHPFLRKSN*STSIPS Trigger: CGAGGGTATAGAAGTTGACCAGTTAGATTTACGAAG...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTCCATGCACATCAATATaGCTTCTTCATGTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLNPVNTSFHISNFPLFPCTSI*LLHVLL Trigger: GAGGAGAACATGAAGAAGCCATATTGATGTGCATGG...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | AGTGATGACAGTACCATTTTTATCATCAAGAACAATGAGGTCCCGTTAGAAGATATGGAGACTAAGCCTTaGTGTTTTGAGAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDDSTIFIIKNNEVPLEDMETKP*CFEKAS Trigger: AGAAGCTTTCTCAAAACATCAAGGCTTAGTCTCCAT...ATCTTCTAACGGGACCTCATTGTTCTTGATGATAAAAATGGTACTGTCATCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR TCA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTACAGCTGGGGCTTATTaGCATTTTCCATTACCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ISLNPVNTSFHISNFPLFTAGAY*HFPLPL Trigger: TAATGGTAATGGAAAATGTCAATAAGCCCCAGCTGT...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR GCA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTGCAATCAACTCAAACTaGAATGATTTCTCCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISLNPVNTSFHISNFPLFAINSN*NDFSMS Trigger: TGACATGGAGAAATCATTGCAGTTTGAGTTGATTGC...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTATTCTTCTGTGTCACTaGGATTTAAATGTGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLNPVNTSFHISNFPLFILLCH*DLNVQQ Trigger: TTGCTGCACATTTAAATCCCAGTGACACAGAAGAAT...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CCA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTCATCTGGGTTTTCTTTaGGTGATGATTTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISLNPVNTSFHISNFPLFHLGFL*VMIFLF Trigger: AAAAAGGAAAATCATCACCCAAAGAAAACCCAGATG...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 90 bp | GACCACAAGTGGAGGGAGTGCCAGAGCCTTCTGGTAATAGTGGATTaGAAGGTGTGTCAGCCCCAGCTGATGAAGGCCACGGCCCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: DHKWRECQSLLVIVD*KVCQPQLMKATAQI Trigger: AATTTGGGCCGTGGCCTTCATCAGCTGGGGCTGACACACCTTGCAATCCACTATTACCAGAAGGCTCTGGCACTCCCTCCACTTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 90 bp | GCTGTGCAGCATTGGCATCTTGGGCTAAGGTGTCTGGATCATACATaGGTTCCAGCGCTTCCAGAGCTTTCTCAGGACGGCCTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVQHWHLGLRCLDHT*VPALPELSQDGLAA Trigger: AGCAGCTAGGCCGTCCTGAGAAAGCTCTGGAAGCGCTGGAACCCATGTATGATCCAGACACCTTAGCCCAAGATGCCAATGCTGCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 90 bp | GGTTCCAGCGCTTCCAGAGCTTTCTCAGGACGGCCTAGCTGCTGCTaGAGGATGGAAAGTGAAATTCTTGCATCCAAATGGAGTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSASRAFSGRPSCC*RMESEILASKWSGA Trigger: GGCTCCACTCCATTTGGATGCAAGAATTTCACTTTCCATCCTGCAGCAGCAGCTAGGCCGTCCTGAGAAAGCTCTGGAAGCGCTGGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 90 bp | ATGGGTTCCAGCGCTTCCAGAGCTTTCTCAGGACGGCCTAGCTGCTaGTGCAGGATGGAAAGTGAAATTCTTGCATCCAAATGGAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MGSSASRAFSGRPSC*CRMESEILASKWSG Trigger: TCCACTCCATTTGGATGCAAGAATTTCACTTTCCATCCTGCAGCAGCAGCTAGGCCGTCCTGAGAAAGCTCTGGAAGCGCTGGAACCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 90 bp | GCGCTTCCAGAGCTTTCTCAGGACGGCCTAGCTGCTGCTGCAGGATaGAAAGTGAAATTCTTGCATCCAAATGGAGTGGAGCCAGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALPELSQDGLAAAAG*KVKFLHPNGVEPDQ Trigger: TTGATCTGGCTCCACTCCATTTGGATGCAAGAATTTCACTTTCCATCCTGCAGCAGCAGCTAGGCCGTCCTGAGAAAGCTCTGGAAGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 90 bp | CGGTTGAGAACCATCTCCAACACAAATACATCGCCTGCAGTGGGTTaGTCTGCTGTTTCTTCCTCCTCCTCCTCTTCTTCCTCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLRTISNTNTSPAVG*SAVSSSSSSSSSSS Trigger: TGAAGAGGAGGAAGAAGAGGAGGAGGAGGAAGAAACAGCAGAGCAACCCACTGCAGGCGATGTATTTGTGTTGGAGATGGTTCTCAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 90 bp | TACATGGGTTCCAGCGCTTCCAGAGCTTTCTCAGGACGGCCTAGCTaGTGCTGCAGGATGGAAAGTGAAATTCTTGCATCCAAATGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YMGSSASRAFSGRPS*CCRMESEILASKWS Trigger: ACTCCATTTGGATGCAAGAATTTCACTTTCCATCCTGCAGCAGCAGCTAGGCCGTCCTGAGAAAGCTCTGGAAGCGCTGGAACCCATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 90 bp | CGATGGAGCAGTAATTTCAGTTCCTGCTGTGCAGCATTGGCATCTTaGGCTAAGGTGTCTGGATCATACATGGGTTCCAGCGCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RWSSNFSSCCAALAS*AKVSGSYMGSSASR Trigger: TCTGGAAGCGCTGGAACCCATGTATGATCCAGACACCTTAGCCCAAGATGCCAATGCTGCACAGCAGGAACTGAAATTACTGCTCCATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 90 bp | GAGAACCATCTCCAACACAAATACATCGCCTGCAGTGGGTTGCTCTaGTGTTTCTTCCTCCTCCTCCTCTTCTTCCTCCTCTTCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: ENHLQHKYIACSGLL*CFFLLLLFFLLFII Trigger: GATGATGAAGAGGAGGAAGAAGAGGAGGAGGAGGAAGAAACAGCAGAGCAACCCACTGCAGGCGATGTATTTGTGTTGGAGATGGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CCA 90 bp | GTTGAGATGTACAAGGCAGACCATCAGCTTCACCGTGATGTCTATTaGCACGCTGTCAGGTATAGAGCAGGTAACCGTCTCAGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VEMYKADHQLHRDVY*HAVRYRAGNRLSSF Trigger: AAAGCTGCTGAGACGGTTACCTGCTCTATACCTGACAGCGTGCCAATAGACATCACGGTGAAGCTGATGGTCTGCCTTGTACATCTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CCA 90 bp | CCCCATCTGATGTTTCTCCTTCATTGGCGTCTTTGTCCTGGGATTTaGCAGAGTCAATTCCTGATGAGGATGGAACTTCGGAGTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PHLMFLLHWRLCPGI*QSQFLMRMELRSHL Trigger: CAGATGACTCCGAAGTTCCATCCTCATCAGGAATTGACTCTGCCAAATCCCAGGACAAAGACGCCAATGAAGGAGAAACATCAGATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTATCGCCTGCAGTGGGTaGCTCTGCTGTTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WEELLKSPLYFDPRSHMVIACSG*LCCFFL Trigger: GAGGAAGAAACAGCAGAGCAACCCACTGCAGGCGAT...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGTCTACAGCTGAGCTACATCCCCTGCTTCAAAGCAGTTGTAATGGTAGCATTCTTGGTTTCACGGTaGAGAACCATCTCCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: GSLQLSYIPCFKAVVMVAFLVSR*RTISNT Trigger: TGTGTTGGAGATGGTTCTCAACCGTGAAACCAAGAA...TGCTACCATTACAACTGCTTTGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCTCCTGCTGTGCAGCATaGGCATCTTGGGCTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLYFDPRSHMVFLYNWISCCAA*ASWAKV Trigger: CACCTTAGCCCAAGATGCCAATGCTGCACAGCAGGA...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCATAGGCACGGAAGGCTaGGACATACTGTCCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRIGTEG*DILSKC Trigger: GCACTTGGACAGTATGTCCAAGCCTTCCGTGCCTAT...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CCA 90 bp | GCAATTCAGCTTCTTGGAACCGAGCCAAATCACTCAAGGTATATATaGCCTTTAAGAGAAGGTTCCACCAGTCTTCTTTCGGCAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: AIQLLGTEPNHSRYI*PLREGSTSLLSARH Trigger: GTGTCTTGCCGAAAGAAGACTGGTGGAACCTTCTCTTAAAGGCCATATATACCTTGAGTGATTTGGCTCGGTTCCAAGAAGCTGAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | TCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTTCCTTTACAACTGGATCTCTGGTAATAGTGGATaGCAAGGTGTGTCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPLYFDPRSHMVFLYNWISGNSG*QGVSAP Trigger: TGGGGCTGACACACCTTGCAATCCACTATTACCAGA...GATCCAGTTGTAAAGGAAAACCATGTGAGACCGAGGATCAAAATACAATGGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCGATGTTTCTCCTTCATaGGCGTCTTTGTCCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRDVSPS*ASLSWD Trigger: ATCCCAGGACAAAGACGCCAATGAAGGAGAAACATC...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTGTTGTCAGAAGAGGATaGAGGGGCTCAAGGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNFLELESMTVTEHDHPFVVRRG*RGSRML Trigger: CAACATCCTTGAGCCCCTCAATCCTCTTCTGACAAC...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCCAAACCACTGCGAGGTaGTATCTTTCAGAGCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRQTTAR*YLSEQT Trigger: GGTTTGCTCTGAAAGATACAACCTCGCAGTGGTTTG...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGTCTACAGCTGAGCTACATCCCCTGCTTCAAAGCAGTTGTAATGGTAGCAGATGTTTCCTGCTCGTaGTTGTCTGATATTTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLQLSYIPCFKAVVMVADVSCS*LSDILS Trigger: AGATAAAATATCAGACAACAACGAGCAGGAAACATC...TGCTACCATTACAACTGCTTTGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CAA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCAAAGCTTTTGAGCCATaGCAGTGTTCCCACTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRKAFEP*QCSHCS Trigger: AGAGCAGTGGGAACACTGCAATGGCTCAAAAGCTTT...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CAA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTGGTATACAAAAGCTTTaGAGCCATTGCAGTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WEELLKSPLYFDPRSHMVGIQKL*SHCSVP Trigger: GGGAACACTGCAATGGCTCAAAAGCTTTTGTATACC...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS TCA 90 bp | TGGGATAGGCACGGAAGGCTTGGACATACTGTCCAAGTGCATGTTTaGAACTACCAGATACAAATGCATTGTGTCCATTTAAAACGCACA | + |
|
Preference number: 5 (lower is better) Translates to: WDRHGRLGHTVQVHV*NYQIQMHCVHLKRT Trigger: TGTGCGTTTTAAATGGACACAATGCATTTGTATCTGGTAGTTTCAAACATGCACTTGGACAGTATGTCCAAGCCTTCCGTGCCTATCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CCA 90 bp | AAACTTGGGCTCTATTCATCGCAACCTTTAAAAGCATGGCGAGCATaGTTAGCAAGGTATCCAGATAGCCGTACATTTTGCCTTGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KLGLYSSQPLKAWRA*LARYPDSRTFCLVK Trigger: TTTCACAAGGCAAAATGTACGGCTATCTGGATACCTTGCTAACCATGCTCGCCATGCTTTTAAAGGTTGCGATGAATAGAGCCCAAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS TCA 90 bp | GCCATCCATGGCCATTTTATGATCACCCATCTGTTCATAAAGGCTTaGTCTCTCCCACAGGTAACGGACATTAGTAGGTTCATATTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: AIHGHFMITHLFIKA*SLPQVTDISRFIFK Trigger: CTTAAATATGAACCTACTAATGTCCGTTACCTGTGGGAGAGATCAAGCCTTTATGAACAGATGGGTGATCATAAAATGGCCATGGATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTTCTTTCATCATTTTCTaGGTTTCACGGTTGAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: WEELLKSPLYFDPRSHMVSFIIF*VSRLRT Trigger: GGTTCTCAACCGTGAAACCAAGAAAATGATGAAAGA...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCTTTAATGATGGGACACGTTATCCACAAAAACTTGGGTTGCTTCAGGGCAATTACCTCCAAAGCTTaGTCATACTGCTTGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSLMMGHVIHKNLGCFRAITSKA*SYCLLE Trigger: TTCCAACAAGCAGTATGACAAAGCTTTGGAGGTAAT...TGCCCTGAAGCAACCCAAGTTTTTGTGGATAACGTGTCCCATCATTAAAGAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGAACTCCTAAAGTCGCCATTGTATTTTGATCCTCGGTCTCACATGGTTAGATATCAAACAAACTaGGGCTCTATTCATCGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: WEELLKSPLYFDPRSHMVRYQTN*GSIHRN Trigger: GTTGCGATGAATAGAGCCCAAGTTTGTTTGATATCT...AACCATGTGAGACCGAGGATCAAAATACAATGGCGACTTTAGGAGTTCTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCCACAGCTGGGGCTTATaGACATTTTCCATTACCATT | + |
|
Preference number: 5 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRHSWGL*TFSITI Trigger: AATGGTAATGGAAAATGTCAATAAGCCCCAGCTGTG...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | CATGTTCACACTTTATATTTAAGAACTGTGCAACTGAGTGATGGTGGCACACGCATGATGTCTTACATCTaGGGAGTGCATGGTAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: HVHTLYLRTVQLSDGGTRMMSYI*GVHGNL Trigger: CAAGTTACCATGCACTCCCAAGATGTAAGACATCAT...GCGTGTGCCACCATCACTCAGTTGCACAGTTCTTAAATATAAAGTGTGAACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTCTAGCAAAGCGAATATaGGCTTCACCCATGAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: ISLNPVNTSFHISNFPLFLAKRI*ASPMRP Trigger: AGGTCTCATGGGTGAAGCCAATATTCGCTTTGCTAG...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS TCA 90 bp | CCTTTAAGAGAAGGTTCCACCAGTCTTCTTTCGGCAAGACACTCGTaGGTACAGCAAATATTGCTTTTGCATCATAATTTGATGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLREGSTSLLSARHS*VQQILLLHHNLMFP Trigger: AGGAAACATCAAATTATGATGCAAAAGCAATATTTGCTGTACTCACGAGTGTCTTGCCGAAAGAAGACTGGTGGAACCTTCTCTTAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATGACAGTACCATTTTTATCATCAAGAACAATGAGGTCCCGTTAGAAGATTTTCTCCATGTCACCTaGATCCTCGTATATCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SDDSTIFIIKNNEVPLEDFLHVT*ILVYHG Trigger: GCCATGATATACGAGGATCAAGGTGACATGGAGAAA...ATCTTCTAACGGGACCTCATTGTTCTTGATGATAAAAATGGTACTGTCATCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CAA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTTCTGTTCATAAAGGCTaGATCTCTCCCACAGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISLNPVNTSFHISNFPLFSVHKG*ISPTGN Trigger: GTTACCTGTGGGAGAGATCAAGCCTTTATGAACAGA...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACTTTCTTGAACTGGAAAGCATGACAGTAACTGAACACGACCATCCCTTTTGTCCAAGTGCATGTTaGAAACTACCAGATACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LNFLELESMTVTEHDHPFCPSAC*KLPDTN Trigger: ATTTGTATCTGGTAGTTTCAAACATGCACTTGGACA...AAAGGGATGGTCGTGTTCAGTTACTGTCATGCTTTCCAGTTCAAGAAAGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTATAAGCCAAAGGAGCTaGTCTTATGATTTCCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISLNPVNTSFHISNFPLFISQRS*SYDFHA Trigger: TGCATGGAAATCATAAGACAAGCTCCTTTGGCTTAT...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CAA 90 bp | AGTGATGACAGTACCATTTTTATCATCAAGAACAATGAGGTCCCGTTAGAAGATTCATCTGGGTTTTCTTaGGGTGATGATTTTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SDDSTIFIIKNNEVPLEDSSGFS*GDDFPF Trigger: AAAAGGAAAATCATCACCCAAAGAAAACCCAGATGA...ATCTTCTAACGGGACCTCATTGTTCTTGATGATAAAAATGGTACTGTCATCACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATGACAGTACCATTTTTATCATCAAGAACAATGAGGTCCCGTTAGAAGATGTTTCCTGCTCGTTGTaGTCTGATATTTTATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SDDSTIFIIKNNEVPLEDVSCSL*SDILSL Trigger: AAGAGATAAAATATCAGACAACAACGAGCAGGAAAC...ATCTTCTAACGGGACCTCATTGTTCTTGATGATAAAAATGGTACTGTCATCACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CAA 90 bp | ATATCTTTAAACCCTGTCAACACTTCATTCCATATATCCAACTTCCCCCTCTTTAAGTATTCTAGTTCTTaGCGTTTTTGTCTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISLNPVNTSFHISNFPLFKYSSS*RFCLSS Trigger: TGACGACAGACAAAAACGCAAAGAACTAGAATACTT...AAAGAGGGGGAAGTTGGATATATGGAATGAAGTGTTGACAGGGTTTAAAGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS-3UTR CAA 90 bp | AGTGATGACAGTACCATTTTTATCATCAAGAACAATGAGGTCCCGTTAGAAGATGCTTTTCTGAAATTTTaGTCCAGAATAGCAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SDDSTIFIIKNNEVPLEDAFLKF*SRIAAE Trigger: TTCTGCTGCTATTCTGGACAAAAATTTCAGAAAAGC...ATCTTCTAACGGGACCTCATTGTTCTTGATGATAAAAATGGTACTGTCATCACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS TCA 90 bp | TATAATTCAGCTGCTATGTTAACATCTTCCATGGAGACTAAGCCTTaGTGTTTTGAGAAAGCTTCTTCAATTATGTTTATAGCTGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: YNSAAMLTSSMETKP*CFEKASSIMFIAEA Trigger: CGCTTCAGCTATAAACATAATTGAAGAAGCTTTCTCAAAACATCAAGGCTTAGTCTCCATGGAAGATGTTAACATAGCAGCTGAATTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CAA 90 bp | CGACCACAAGTGGAGGGAGTGCCAGAGCCTTCTGGTAATAGTGGATaGCAAGGTGTGTCAGCCCCAGCTGATGAAGGCCACGGCCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RPQVEGVPEPSGNSG*QGVSAPADEGHGPN Trigger: ATTTGGGCCGTGGCCTTCATCAGCTGGGGCTGACACACCTTGCAATCCACTATTACCAGAAGGCTCTGGCACTCCCTCCACTTGTGGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 72 bp | TGGAGGGAGTGCCAGAGCCTTCTGGTAATAGTGGATTaGAAGGTGTGTCAGCCCCAGCTGATGAAGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: WRECQSLLVIVD*KVCQPQLMKAT Trigger: CGTGGCCTTCATCAGCTGGGGCTGACACACCTTGCAATCCACTATTACCAGAAGGCTCTGGCACTCCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CAA 72 bp | GTGGAGGGAGTGCCAGAGCCTTCTGGTAATAGTGGATaGCAAGGTGTGTCAGCCCCAGCTGATGAAGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VEGVPEPSGNSG*QGVSAPADEGH Trigger: GTGGCCTTCATCAGCTGGGGCTGACACACCTTGCAATCCACTATTACCAGAAGGCTCTGGCACTCCCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 72 bp | CATTGGCATCTTGGGCTAAGGTGTCTGGATCATACATaGGTTCCAGCGCTTCCAGAGCTTTCTCAGGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: HWHLGLRCLDHT*VPALPELSQDG Trigger: GCCGTCCTGAGAAAGCTCTGGAAGCGCTGGAACCCATGTATGATCCAGACACCTTAGCCCAAGATGCCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 72 bp | CTCCAACACAAATACATCGCCTGCAGTGGGTTGCTCTaGTGTTTCTTCCTCCTCCTCCTCTTCTTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQHKYIACSGLL*CFFLLLLFFLL Trigger: GAGGAGGAAGAAGAGGAGGAGGAGGAAGAAACAGCAGAGCAACCCACTGCAGGCGATGTATTTGTGTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CAA 90 bp | ACGGTTGAGAACCATCTCCAACACAAATACATCGCCTGCAGTGGGTaGCTCTGCTGTTTCTTCCTCCTCCTCCTCTTCTTCCTCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TVENHLQHKYIACSG*LCCFFLLLLFFLLF Trigger: GAAGAGGAGGAAGAAGAGGAGGAGGAGGAAGAAACAGCAGAGCAACCCACTGCAGGCGATGTATTTGTGTTGGAGATGGTTCTCAACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 72 bp | GCTTCCAGAGCTTTCTCAGGACGGCCTAGCTGCTGCTaGAGGATGGAAAGTGAAATTCTTGCATCCAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: ASRAFSGRPSCC*RMESEILASKW Trigger: CCATTTGGATGCAAGAATTTCACTTTCCATCCTGCAGCAGCAGCTAGGCCGTCCTGAGAAAGCTCTGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 72 bp | AGCGCTTCCAGAGCTTTCTCAGGACGGCCTAGCTGCTaGTGCAGGATGGAAAGTGAAATTCTTGCATCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SASRAFSGRPSC*CRMESEILASK Trigger: TTTGGATGCAAGAATTTCACTTTCCATCCTGCAGCAGCAGCTAGGCCGTCCTGAGAAAGCTCTGGAAGCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 72 bp | TACAAGGCAGACCATCAGCTTCACCGTGATGTCTATTaGCACGCTGTCAGGTATAGAGCAGGTAACCGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: YKADHQLHRDVY*HAVRYRAGNRL Trigger: GAGACGGTTACCTGCTCTATACCTGACAGCGTGCCAATAGACATCACGGTGAAGCTGATGGTCTGCCTTGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CAA 72 bp | ATGGCTTCTTCATGTTCTCCTCTAGCAAAGCGAATATaGGCTTCACCCATGAGACCTCTCAGGGCTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MASSCSPLAKRI*ASPMRPLRALG Trigger: CCCCAGAGCCCTGAGAGGTCTCATGGGTGAAGCCAATATTCGCTTTGCTAGAGGAGAACATGAAGAAGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CAA 72 bp | ATTGTAGAGCGGCTCACTGGGATAGGCACGGAAGGCTaGGACATACTGTCCAAGTGCATGTTTGAAACTACC | + |
|
Preference number: 6 (lower is better) Translates to: IVERLTGIGTEG*DILSKCMFETT Trigger: GGTAGTTTCAAACATGCACTTGGACAGTATGTCCAAGCCTTCCGTGCCTATCCCAGTGAGCCGCTCTACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 72 bp | CGGATGCTGAGGTATCGATTAAGGAAGGAAAAGCCCTaGACAGTCAGAGCATGTCTCTTCAGCACATACTTC | + |
|
Preference number: 6 (lower is better) Translates to: RMLRYRLRKEKP*TVRACLFSTYF Trigger: GAAGTATGTGCTGAAGAGACATGCTCTGACTGTGCAGGGCTTTTCCTTCCTTAATCGATACCTCAGCATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 72 bp | AGTAATTTCAGTTCCTGCTGTGCAGCATTGGCATCTTaGGCTAAGGTGTCTGGATCATACATGGGTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SNFSSCCAALAS*AKVSGSYMGSS Trigger: GCTGGAACCCATGTATGATCCAGACACCTTAGCCCAAGATGCCAATGCTGCACAGCAGGAACTGAAATTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CAA 72 bp | CTCACCCCATCTGATGTTTCTCCTTCATTGGCGTCTTaGTCCTGGGATTTGGCAGAGTCAATTCCTGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LTPSDVSPSLAS*SWDLAESIPDE Trigger: CTCATCAGGAATTGACTCTGCCAAATCCCAGGACAAAGACGCCAATGAAGGAGAAACATCAGATGGGGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CAA 72 bp | CGATGGAGCAGTAATTTCAGTTCCTGCTGTGCAGCATaGGCATCTTGGGCTAAGGTGTCTGGATCATACATG | + |
|
Preference number: 6 (lower is better) Translates to: RWSSNFSSCCAA*ASWAKVSGSYM Trigger: CATGTATGATCCAGACACCTTAGCCCAAGATGCCAATGCTGCACAGCAGGAACTGAAATTACTGCTCCATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CAA 90 bp | ACCCCATCTGATGTTTCTCCTTCATTGGCGTCTTTGTCCTGGGATTaGGCAGAGTCAATTCCTGATGAGGATGGAACTTCGGAGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TPSDVSPSLASLSWD*AESIPDEDGTSESS Trigger: AGATGACTCCGAAGTTCCATCCTCATCAGGAATTGACTCTGCCAAATCCCAGGACAAAGACGCCAATGAAGGAGAAACATCAGATGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CAA 90 bp | CACATCAATATGGCTTCTTCATGTTCTCCTCTAGCAAAGCGAATATaGGCTTCACCCATGAGACCTCTCAGGGCTCTGGGGAGTTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: HINMASSCSPLAKRI*ASPMRPLRALGSLL Trigger: GAGTAAACTCCCCAGAGCCCTGAGAGGTCTCATGGGTGAAGCCAATATTCGCTTTGCTAGAGGAGAACATGAAGAAGCCATATTGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CAA 90 bp | TGTTCTACCAGTGTTGTCAGAAGAGGATTGAGGGGCTCAAGGATGTaGAGATGTACAAGGCAGACCATCAGCTTCACCGTGATGTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: CSTSVVRRGLRGSRM*RCTRQTISFTVMSI Trigger: AATAGACATCACGGTGAAGCTGATGGTCTGCCTTGTACATCTCAACATCCTTGAGCCCCTCAATCCTCTTCTGACAACACTGGTAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CAA 90 bp | TATGCAGAGATTGTAGAGCGGCTCACTGGGATAGGCACGGAAGGCTaGGACATACTGTCCAAGTGCATGTTTGAAACTACCAGATACAAA | + |
|
Preference number: 6 (lower is better) Translates to: YAEIVERLTGIGTEG*DILSKCMFETTRYK Trigger: TTTGTATCTGGTAGTTTCAAACATGCACTTGGACAGTATGTCCAAGCCTTCCGTGCCTATCCCAGTGAGCCGCTCTACAATCTCTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CCA 72 bp | CCATCTGATGTTTCTCCTTCATTGGCGTCTTTGTCCTaGGATTTGGCAGAGTCAATTCCTGATGAGGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSDVSPSLASLS*DLAESIPDEDG Trigger: TCCATCCTCATCAGGAATTGACTCTGCCAAATCCCAGGACAAAGACGCCAATGAAGGAGAAACATCAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CAA 72 bp | GATGTTTCTCCTTCATTGGCGTCTTTGTCCTGGGATTaGGCAGAGTCAATTCCTGATGAGGATGGAACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: DVSPSLASLSWD*AESIPDEDGTS Trigger: CGAAGTTCCATCCTCATCAGGAATTGACTCTGCCAAATCCCAGGACAAAGACGCCAATGAAGGAGAAACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS GCA 72 bp | GGGATAGGCACGGAAGGCTTGGACATACTGTCCAAGTaGATGTTTGAAACTACCAGATACAAATGCATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GIGTEGLDILSK*MFETTRYKCIV Trigger: CACAATGCATTTGTATCTGGTAGTTTCAAACATGCACTTGGACAGTATGTCCAAGCCTTCCGTGCCTATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
||
| CDS CCA 72 bp | AAACTTGGGCTCTATTCATCGCAACCTTTAAAAGCATaGCGAGCATGGTTAGCAAGGTATCCAGATAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: KLGLYSSQPLKA*RAWLARYPDSR Trigger: ACGGCTATCTGGATACCTTGCTAACCATGCTCGCCATGCTTTTAAAGGTTGCGATGAATAGAGCCCAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS TCA 72 bp | GGCCATTTTATGATCACCCATCTGTTCATAAAGGCTTaGTCTCTCCCACAGGTAACGGACATTAGTAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GHFMITHLFIKA*SLPQVTDISRF Trigger: GAACCTACTAATGTCCGTTACCTGTGGGAGAGATCAAGCCTTTATGAACAGATGGGTGATCATAAAATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 72 bp | CTCTATTCATCGCAACCTTTAAAAGCATGGCGAGCATaGTTAGCAAGGTATCCAGATAGCCGTACATTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LYSSQPLKAWRA*LARYPDSRTFC Trigger: GCAAAATGTACGGCTATCTGGATACCTTGCTAACCATGCTCGCCATGCTTTTAAAGGTTGCGATGAATAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 72 bp | CTTCTTGGAACCGAGCCAAATCACTCAAGGTATATATaGCCTTTAAGAGAAGGTTCCACCAGTCTTCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: LLGTEPNHSRYI*PLREGSTSLLS Trigger: CGAAAGAAGACTGGTGGAACCTTCTCTTAAAGGCCATATATACCTTGAGTGATTTGGCTCGGTTCCAAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CAA 90 bp | GTTTTTCAGCATCAGACGGAGACAGAATCGATGATGTCTTACATCTaGGGAGTGCATGGTAACTTGATTGAAAATATTCCACAGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VFQHQTETESMMSYI*GVHGNLIENIPQLG Trigger: CCCCAGCTGTGGAATATTTTCAATCAAGTTACCATGCACTCCCAAGATGTAAGACATCATCGATTCTGTCTCCGTCTGATGCTGAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS TCA 72 bp | ATCAACTCAAACTGCAATGATTTCTCCATGTCACCTTaGTCCTCGTATATCATGGCAAGTGTAGAGAATGGC | + |
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Preference number: 6 (lower is better) Translates to: INSNCNDFSMSP*SSYIMASVENG Trigger: GCCATTCTCTACACTTGCCATGATATACGAGGATCAAGGTGACATGGAGAAATCATTGCAGTTTGAGTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS TCA 72 bp | CACGGAAGGCTTGGACATACTGTCCAAGTGCATGTTTaGAACTACCAGATACAAATGCATTGTGTCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: HGRLGHTVQVHV*NYQIQMHCVHL Trigger: TAAATGGACACAATGCATTTGTATCTGGTAGTTTCAAACATGCACTTGGACAGTATGTCCAAGCCTTCCGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 72 bp | ACCTTGATCCTCGTATATCATGGCAAGTGTAGAGAATaGCTCATAAGCCAAAGGAGCTTGTCTTATGATTTC | + |
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Preference number: 6 (lower is better) Translates to: TLILVYHGKCRE*LISQRSLSYDF Trigger: GAAATCATAAGACAAGCTCCTTTGGCTTATGAGCCATTCTCTACACTTGCCATGATATACGAGGATCAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS GCA 72 bp | TATGACACAGTAGGTATACAAAAGCTTTTGAGCCATTaGAGTGTTCCCACTGCTCTGATAAATGAGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: YDTVGIQKLLSH*SVPTALINERH Trigger: ATGTCTCTCATTTATCAGAGCAGTGGGAACACTGCAATGGCTCAAAAGCTTTTGTATACCTACTGTGTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CCA 72 bp | TACATTTTGCCTTGTGAAAACAATAGAGTAGAACGATaGAGCAGTAATTTCAGTTCCTGCTGTGCAGCATTG | + |
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Preference number: 6 (lower is better) Translates to: YILPCENNRVER*SSNFSSCCAAL Trigger: CAATGCTGCACAGCAGGAACTGAAATTACTGCTCCATCGTTCTACTCTATTGTTTTCACAAGGCAAAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CAA 72 bp | CATCAGACGGAGACAGAATCGATGATGTCTTACATCTaGGGAGTGCATGGTAACTTGATTGAAAATATTCCA | + |
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Preference number: 6 (lower is better) Translates to: HQTETESMMSYI*GVHGNLIENIP Trigger: TGGAATATTTTCAATCAAGTTACCATGCACTCCCAAGATGTAAGACATCATCGATTCTGTCTCCGTCTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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| CDS CAA 90 bp | CCAGAAAAATCTGTAATTACCTCCAAAGCTTTGTCATACTGCTTGTaGGAAATATATAATTCAGCTGCTATGTTAACATCTTCCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: PEKSVITSKALSYCL*EIYNSAAMLTSSME Trigger: CTCCATGGAAGATGTTAACATAGCAGCTGAATTATATATTTCCAACAAGCAGTATGACAAAGCTTTGGAGGTAATTACAGATTTTTCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041638.8 |
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