Pregenerated sensors for GTF3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016503Ensembl transcript IDs: ENSMUST00000132102.2, ENSMUST00000146511.8
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTTCCCGCCTAGCAGACGCTGCTGCTGGACTCTaGGCTGGCGTTAGGCAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SAGQEPLLAALKSSRLADAAAGL*AGVRQG Trigger: TCCTTGCCTAACGCCAGCGCAGAGTCCAGCAGCAGC...GTCTGCTAGGCGGGAAGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| 3UTR CAA 90 bp | GCTGCTGGACTCTGCGCTGGCGTTAGGCAAGGAGTAGTCGGGCTCTaGTTTCCTCTTAGGAGGGAAGTACCCACTGAGGCGAGAGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: AAGLCAGVRQGVVGL*FPLRREVPTEARGQ Trigger: TTGGCCTCTCGCCTCAGTGGGTACTTCCCTCCTAAGAGGAAACAAGAGCCCGACTACTCCTTGCCTAACGCCAGCGCAGAGTCCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTTCCCGCCTAGCAGACAGGAAGACAGACAACTaGGTTGCCCATTACACAACG | + |
|
Preference number: 2 (lower is better) Translates to: SAGQEPLLAALKSSRLADRKTDN*VAHYTT Trigger: CGTTGTGTAATGGGCAACTCAGTTGTCTGTCTTCCT...GTCTGCTAGGCGGGAAGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| 3UTR TCA 72 bp | GCTGCGTCTCTCCCGAGGGGCTCTTACCTTCAGGAGTaGGGAAGACAGACAACTGAGTTGCCCATTACACAA | + |
|
Preference number: 3 (lower is better) Translates to: AASLPRGSYLQE*GRQTTELPITQ Trigger: TTGTGTAATGGGCAACTCAGTTGTCTGTCTTCCTCACTCCTGAAGGTAAGAGCCCCTCGGGAGAGACGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| 3UTR TCA 72 bp | GGGCTCTTACCTTCAGGAGTGAGGAAGACAGACAACTaGGTTGCCCATTACACAACGGGGATCCACTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GLLPSGVRKTDN*VAHYTTGIHSN Trigger: GTTGGAGTGGATCCCCGTTGTGTAATGGGCAACTCAGTTGTCTGTCTTCCTCACTCCTGAAGGTAAGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTTCCCGCCTAGCAGACGGCCTCACAGCCGAGTaGTGGCCCCAGCAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAGQEPLLAALKSSRLADGLTAE*WPQQLP Trigger: TGGCAGCTGCTGGGGCCAGCACTCGGCTGTGAGGCC...GTCTGCTAGGCGGGAAGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGGCTGGCGGGGGCAGCTaGGCCTCTGGGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSDFNRKSAGQEPLLAALAGGGS*ASGLLL Trigger: CAGCAGCAGCCCAGAGGCCCAGCTGCCCCCGCCAGC...CAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGCCTCTGGGCTGCTGCTGGACTCTGCGCTGGCGTTAGGCAAGGAGTAGTCCTGGTGTGCTGGCACTaGTGGGTTCTCAGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLWAAAGLCAGVRQGVVLVCWH*WVLSCW Trigger: CCAGCAGCTGAGAACCCATCAGTGCCAGCACACCAG...GACTACTCCTTGCCTAACGCCAGCGCAGAGTCCAGCAGCAGCCCAGAGGCCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTTCCCGCCTAGCAGACACGCAGGATGGGGTATaGGGATGGACAGACGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGQEPLLAALKSSRLADTQDGV*GWTDAK Trigger: CTTGGCGTCTGTCCATCCGCATACCCCATCCTGCGT...GTCTGCTAGGCGGGAAGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCTGGGCCTCTGGGCTGCTGCTGGACTCTGCGCTGGCGTTAGGCAAGGAGGGCGCTTTTCCTCGTaGAAGGAGAGAATGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLGLWAAAGLCAGVRQGGRFSS*KERMWL Trigger: GAGCCACATTCTCTCCTTCCACGAGGAAAAGCGCCC...TCCTTGCCTAACGCCAGCGCAGAGTCCAGCAGCAGCCCAGAGGCCCAGCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGGGGCCTCTGGGCTGCTaGTGGACTCTGCGCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSDFNRKSAGQEPLLAALGPLGC*WTLRWR Trigger: ACGCCAGCGCAGAGTCCAGCAGCAGCCCAGAGGCCC...CAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTGGCGAGAGGCCAAGCTaGGTCTCTCCCGAGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DFNRKSAGQEPLLAALKSGERPS*VSPEGL Trigger: GAGCCCCTCGGGAGAGACGCAGCTTGGCCTCTCGCC...AGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGGCTGGGCCTCTGGGCTaGTGCTGGACTCTGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKAGPLG*CWTLRW Trigger: CCAGCGCAGAGTCCAGCAGCAGCCCAGAGGCCCAGC...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS-3UTR CCA 90 bp | GACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTGGGCAGCTGGGCCTCTaGGCTGCTGCTGGACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DFNRKSAGQEPLLAALKSGQLGL*AAAGLC Trigger: GCAGAGTCCAGCAGCAGCCCAGAGGCCCAGCTGCCC...AGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTTGTTTCCTCTTAGGAGGGAAGTACCCACTGAGGCGAGAGGCCAAGCTGCTCACAGCCGAGTGCTaGCCCCAGCAGCTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GSCFLLGGKYPLRREAKLLTAEC*PQQLPL Trigger: AAGTGGCAGCTGCTGGGGCCAGCACTCGGCTGTGAG...CAGCTTGGCCTCTCGCCTCAGTGGGTACTTCCCTCCTAAGAGGAAACAAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGGCTGCTGCTGGACTCTaGGCTGGCGTTAGGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSDFNRKSAGQEPLLAALAAAGL*AGVRQG Trigger: TCCTTGCCTAACGCCAGCGCAGAGTCCAGCAGCAGC...CAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS-3UTR TCA 90 bp | GACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTCTGGTGTGCTGGCACTaGTGGGTTCTCAGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DFNRKSAGQEPLLAALKSLVCWH*WVLSCW Trigger: CCAGCAGCTGAGAACCCATCAGTGCCAGCACACCAG...AGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| 3UTR CAA 72 bp | CTCTGCGCTGGCGTTAGGCAAGGAGTAGTCGGGCTCTaGTTTCCTCTTAGGAGGGAAGTACCCACTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LCAGVRQGVVGL*FPLRREVPTEA Trigger: CGCCTCAGTGGGTACTTCCCTCCTAAGAGGAAACAAGAGCCCGACTACTCCTTGCCTAACGCCAGCGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR CCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGGGGCGCTTTTCCTCGTaGAAGGAGAGAATGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKGRFSS*KERMWL Trigger: GAGCCACATTCTCTCCTTCCACGAGGAAAAGCGCCC...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGGTGTGTTTGCATAGGTaGGCGTCTAGCTTCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKVCLHR*ASSFQA Trigger: AGCCTGGAAGCTAGACGCGCACCTATGCAAACACAC...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGTCGTGCACGACACTGTaGCTCATGAGACTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSDFNRKSAGQEPLLAALSCTTL*LMRLCF Trigger: GAAACAGAGTCTCATGAGGCACAGTGTCGTGCACGA...CAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR CCA 90 bp | GACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTAGGCTTTGTTGTAACTaGCGCTGCAGTCGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DFNRKSAGQEPLLAALKSRLCCN*RCSRER Trigger: CCTTTCCCGACTGCAGCGCCAGTTACAACAAAGCCT...AGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTTGTTTCCTCTTAGGAGGGAAGTACCCACTGAGGCGAGAGGCCAAGCTTGGGTTCTCAGCTGCTaGTGCTTCTTAAAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLFPLRREVPTEARGQAWVLSC*CFLKAF Trigger: GAAGGCCTTTAAGAAGCACCAGCAGCTGAGAACCCA...AGCTTGGCCTCTCGCCTCAGTGGGTACTTCCCTCCTAAGAGGAAACAAGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGCCTCTGGGCTGCTGCTGGACTCTGCGCTGGCGTTAGGCAAGGAGTAGTCTTTGTGTTGAATTTCTaGTTACAGCCATCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLWAAAGLCAGVRQGVVFVLNF*LQPSSA Trigger: TGCAGATGATGGCTGTAATCAGAAATTCAACACAAA...GACTACTCCTTGCCTAACGCCAGCGCAGAGTCCAGCAGCAGCCCAGAGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR TCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGCGACACTGTGCCTCATaGGACTCTGTTTCATTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKRHCAS*DSVSLR Trigger: TCGCAATGAAACAGAGTCTCATGAGGCACAGTGTCG...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGGAGTAGTCGGGCTCTTGTTTCCTCTTAGGAGGGAAGTACCCACTGAGGTGTGTTTGCATAGGTaGGCGTCTAGCTTCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQGVVGLLFPLRREVPTEVCLHR*ASSFQA Trigger: AGCCTGGAAGCTAGACGCGCACCTATGCAAACACAC...CTCAGTGGGTACTTCCCTCCTAAGAGGAAACAAGAGCCCGACTACTCCTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGGAGAGAATGTGGCTCTaGAGGTTGAACACGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKERMWL*RLNTVV Trigger: CACAACCGTGTTCAACCTGCAGAGCCACATTCTCTC...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGGAGACTCTGTTTCATTaGGAATGTCTTGCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSDFNRKSAGQEPLLAALETLFH*ECLATA Trigger: GGCTGTGGCAAGACATTCGCAATGAAACAGAGTCTC...CAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTTCGTGCACGACACTGTaGCTCATGAGACTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DFNRKSAGQEPLLAALKSSCTTL*LMRLCF Trigger: GAAACAGAGTCTCATGAGGCACAGTGTCGTGCACGA...AGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCGTTAGGCAAGGAGTAGTCGGGCTCTTGTTTCCTCTTAGGAGGGAAGTAAGGCTTTGTTGTAACTaGCGCTGCAGTCGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGVRQGVVGLLFPLRREVRLCCN*RCSRER Trigger: CCTTTCCCGACTGCAGCGCCAGTTACAACAAAGCCT...TACTTCCCTCCTAAGAGGAAACAAGAGCCCGACTACTCCTTGCCTAACGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAGCTGCCACTTACTTTaGGCTTCATCCTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSDFNRKSAGQEPLLAALSCHLL*ASSSSC Trigger: ACAAGAAGAGGATGAAGCTCAAAGTAAGTGGCAGCT...CAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR TCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGGAGGGGCTCTTACTTTaGGCTTCATCCTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKEGLLL*ASSSSC Trigger: ACAAGAAGAGGATGAAGCTCAAAGTAAGAGCCCCTC...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS-3UTR CCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGATAGTCGCAAACAAATaGCCTCTCCCCCGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKIVANK*PLPRVF Trigger: AAACACACGGGGGAGAGGCCATTTGTTTGCGACTAT...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTTGTTTCCTCTTAGGAGGGAAGTACCCACTGAGGCGAGAGGCCAAGCTGTCCACGTTTTTCCCATaGAAGAACATCCCTTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSCFLLGGKYPLRREAKLSTFFP*KNIPFD Trigger: GTCAAAAGGGATGTTCTTTCATGGGAAAAACGTGGA...CAGCTTGGCCTCTCGCCTCAGTGGGTACTTCCCTCCTAAGAGGAAACAAGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCGTTAGGCAAGGAGTAGTCGGGCTCTTGTTTCCTCTTAGGAGGGAAGTAATAGTCGCAAACAAATaGCCTCTCCCCCGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGVRQGVVGLLFPLRREVIVANK*PLPRVF Trigger: AAACACACGGGGGAGAGGCCATTTGTTTGCGACTAT...TACTTCCCTCCTAAGAGGAAACAAGAGCCCGACTACTCCTTGCCTAACGCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAGGAAGACAGACAACTGAGTTGCCCATTACACAACGGGGATCCACTCCAACGACACTGTGCCTCATaGGACTCTGTTTCATTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SEEDRQLSCPLHNGDPLQRHCAS*DSVSLR Trigger: TCGCAATGAAACAGAGTCTCATGAGGCACAGTGTCG...TTGGAGTGGATCCCCGTTGTGTAATGGGCAACTCAGTTGTCTGTCTTCCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGATTACAGCCATCATCTaGACAAACAAACGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSDFNRKSAGQEPLLAALITAII*TNKRLF Trigger: GAAAAGCCGTTTGTTTGTGCAGATGATGGCTGTAAT...CAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGAAGACAGACAACTGAGTTGCCCATTACACAACGGGGATCCACTCCAAGAGAGAATGTGGCTCTaGAGGTTGAACACGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SEEDRQLSCPLHNGDPLQERMWL*RLNTVV Trigger: CACAACCGTGTTCAACCTGCAGAGCCACATTCTCTC...TTGGAGTGGATCCCCGTTGTGTAATGGGCAACTCAGTTGTCTGTCTTCCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCGAGGGGCTCTTACCTTCAGGAGTGAGGAAGACAGACAACTGAGTTGCTGCAACCCTCATAACTaGACACATACTGTTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRGALTFRSEEDRQLSCCNPHN*THTVFV Trigger: CACAAAAACAGTATGTGTGCAGTTATGAGGGTTGCA...GCAACTCAGTTGTCTGTCTTCCTCACTCCTGAAGGTAAGAGCCCCTCGGGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTGCAACCCTCATAACTaGACACATACTGTTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKCNPHN*THTVFV Trigger: CACAAAAACAGTATGTGTGCAGTTATGAGGGTTGCA...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGTCCTCTGACATACATTaGAGGTTATGTCCTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSDFNRKSAGQEPLLAALSSDIH*RLCPLY Trigger: ATAAAGAGGACATAACCTGCAATGTATGTCAGAGGA...CAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGAAGACAGACAACTGAGTTGCCCATTACACAACGGGGATCCACTCCAAGAGACTCTGTTTCATTaGGAATGTCTTGCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEEDRQLSCPLHNGDPLQETLFH*ECLATA Trigger: GGCTGTGGCAAGACATTCGCAATGAAACAGAGTCTC...TTGGAGTGGATCCCCGTTGTGTAATGGGCAACTCAGTTGTCTGTCTTCCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR CCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGGTTATGTCCTCTTTATaGGCTTCTCTCATGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKVMSSL*ASLMCF Trigger: GAAACACATGAGAGAAGCCCATAAAGAGGACATAAC...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR CCA 90 bp | GACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTGTTATGTCCTCTTTATaGGCTTCTCTCATGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DFNRKSAGQEPLLAALKSVMSSL*ASLMCF Trigger: GAAACACATGAGAGAAGCCCATAAAGAGGACATAAC...AGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR TCA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTTTGTGTTGAATTTCTaGTTACAGCCATCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDFNRKSAGQEPLLAALKFVLNF*LQPSSA Trigger: TGCAGATGATGGCTGTAATCAGAAATTCAACACAAA...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGGAGTAGTCGGGCTCTTGTTTCCTCTTAGGAGGGAAGTACCCACTGAGTCCTCTGACATACATTaGAGGTTATGTCCTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RQGVVGLLFPLRREVPTESSDIH*RLCPLY Trigger: ATAAAGAGGACATAACCTGCAATGTATGTCAGAGGA...CTCAGTGGGTACTTCCCTCCTAAGAGGAAACAAGAGCCCGACTACTCCTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGAAGACAGACAACTGAGTTGCCCATTACACAACGGGGATCCACTCCAAATTACAGCCATCATCTaGACAAACAAACGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SEEDRQLSCPLHNGDPLQITAII*TNKRLF Trigger: GAAAAGCCGTTTGTTTGTGCAGATGATGGCTGTAAT...TTGGAGTGGATCCCCGTTGTGTAATGGGCAACTCAGTTGTCTGTCTTCCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGAAGACAGACAACTGAGTTGCCCATTACACAACGGGGATCCACTCCAAGTGGGTTTCCATGTTTaGGTTCAATGTGTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEEDRQLSCPLHNGDPLQVGFHV*VQCVSS Trigger: TGAAGAAACACATTGAACGCAAACATGGAAACCCAC...TTGGAGTGGATCCCCGTTGTGTAATGGGCAACTCAGTTGTCTGTCTTCCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTTCCCGCCTAGCAGACCTCTCCCCCGTGTGTTaGCATAGGTGCGCGTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAGQEPLLAALKSSRLADLSPVC*HRCASS Trigger: GCTAGACGCGCACCTATGCAAACACACGGGGGAGAG...GTCTGCTAGGCGGGAAGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS TCA 90 bp | CAGGCCTCACAGCCGAGTGCTGGCCCCAGCAGCTGCCACTTACTTTaGGCTTCATCCTCTTCTTGTCGGGATCGTGCACGACACTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QASQPSAGPSSCHLL*ASSSSCRDRARHCA Trigger: GGCACAGTGTCGTGCACGATCCCGACAAGAAGAGGATGAAGCTCAAAGTAAGTGGCAGCTGCTGGGGCCAGCACTCGGCTGTGAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS GCA 90 bp | TTTGACACAGGTAGCCCTCGTGAACTTTCCCATGCCGTTTCAGCCTaGTGGGCGAGGCAAAGTGCTTCCCGCATCCCTCGTGGGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: FDTGSPRELSHAVSA*WARQSASRIPRGYT Trigger: GGTGTACCCACGAGGGATGCGGGAAGCACTTTGCCTCGCCCAGCAGGCTGAAACGGCATGGGAAAGTTCACGAGGGCTACCTGTGTCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR CAA 90 bp | GACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTCTCTCCCCCGTGTGTTaGCATAGGTGCGCGTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: DFNRKSAGQEPLLAALKSLSPVC*HRCASS Trigger: GCTAGACGCGCACCTATGCAAACACACGGGGGAGAG...AGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR CAA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTTCATTGCGAATGTCTaGCCACAGCCAGCGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDFNRKSAGQEPLLAALKFIANV*PQPACS Trigger: TGAGCACGCTGGCTGTGGCAAGACATTCGCAATGAA...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR CAA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGGGAGTAGTCGGGCTCTaGTTTCCTCTTAGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SDFNRKSAGQEPLLAALKGVVGL*FPLRRE Trigger: TTCCCTCCTAAGAGGAAACAAGAGCCCGACTACTCC...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS-3UTR CAA 90 bp | GACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGTCTCGAGGGGCTCTTACTTaGAGCTTCATCCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DFNRKSAGQEPLLAALKSRGALT*SFILFL Trigger: CAAGAAGAGGATGAAGCTCAAAGTAAGAGCCCCTCG...AGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGGCACACATACTGTTTTaGTGGGTTTCCATGTTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSDFNRKSAGQEPLLAALAHILF*WVSMFA Trigger: CGCAAACATGGAAACCCACAAAAACAGTATGTGTGC...CAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGTTTCCTCTTAGGAGGGAAGTACCCACTGAGGCGAGAGGCCAAGCTGCGTCAGCTGCCACTTACTTaGAGCTTCATCCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCFLLGGKYPLRREAKLRQLPLT*SFILFL Trigger: CAAGAAGAGGATGAAGCTCAAAGTAAGTGGCAGCTG...ACGCAGCTTGGCCTCTCGCCTCAGTGGGTACTTCCCTCCTAAGAGGAAACAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS-3UTR CAA 90 bp | AGTGACTTTAATAGGAAAAGTGCAGGCCAGGAGCCTCTGCTGGCCGCCCTGAAGGCACACATACTGTTTTaGTGGGTTTCCATGTTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SDFNRKSAGQEPLLAALKAHILF*WVSMFA Trigger: CGCAAACATGGAAACCCACAAAAACAGTATGTGTGC...CTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCTATTAAAGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS CCA 72 bp | CGGGGCCCTCACAGGCCCCGACGAACGCATCCGCGATaGTCAGCGACGACACCGCTTCCGCGACTGACACCC | + |
|
Preference number: 6 (lower is better) Translates to: RGPHRPRRTHPR*SATTPLPRLTP Trigger: GGGTGTCAGTCGCGGAAGCGGTGTCGTCGCTGACCATCGCGGATGCGTTCGTCGGGGCCTGTGAGGGCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS CCA 72 bp | CTGCTGGGCGAGGCAAAGTGCTTCCCGCATCCCTCGTaGGTACACCTGAAGAGCGGCTCGCTGGTGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLGEAKCFPHPS*VHLKSGSLVCW Trigger: CCAGCACACCAGCGAGCCGCTCTTCAGGTGTACCCACGAGGGATGCGGGAAGCACTTTGCCTCGCCCAGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS GCA 72 bp | ACACCCTCAGCAGGCACAGACACGCAGGATGGGGTATaGGGATGGACAGACGCCAAGCAGGCCTCACAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TPSAGTDTQDGV*GWTDAKQASQP Trigger: CGGCTGTGAGGCCTGCTTGGCGTCTGTCCATCCGCATACCCCATCCTGCGTGTCTGTGCCTGCTGAGGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS CCA 72 bp | AGCCCTCGTGAACTTTCCCATGCCGTTTCAGCCTGCTaGGCGAGGCAAAGTGCTTCCCGCATCCCTCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPRELSHAVSAC*ARQSASRIPRG Trigger: CCCACGAGGGATGCGGGAAGCACTTTGCCTCGCCCAGCAGGCTGAAACGGCATGGGAAAGTTCACGAGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS CCA 72 bp | TCAGCAGGCACAGACACGCAGGATGGGGTATGCGGATaGACAGACGCCAAGCAGGCCTCACAGCCGAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAGTDTQDGVCG*TDAKQASQPSA Trigger: AGCACTCGGCTGTGAGGCCTGCTTGGCGTCTGTCCATCCGCATACCCCATCCTGCGTGTCTGTGCCTGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS GCA 72 bp | GGTAGCCCTCGTGAACTTTCCCATGCCGTTTCAGCCTaGTGGGCGAGGCAAAGTGCTTCCCGCATCCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GSPRELSHAVSA*WARQSASRIPR Trigger: ACGAGGGATGCGGGAAGCACTTTGCCTCGCCCAGCAGGCTGAAACGGCATGGGAAAGTTCACGAGGGCTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS CAA 72 bp | CAGGTTGAACACGGTTGTGTAGGTTCTTCCGCAGCCTaGCCGCGGACAGCGGTACACATCCCTTTCCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QVEHGCVGSSAA*PRTAVHIPFRG Trigger: GCCCCGGAAAGGGATGTGTACCGCTGTCCGCGGCAAGGCTGCGGAAGAACCTACACAACCGTGTTCAACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS CAA 90 bp | GTGGCTCTGCAGGTTGAACACGGTTGTGTAGGTTCTTCCGCAGCCTaGCCGCGGACAGCGGTACACATCCCTTTCCGGGGCGTGAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VALQVEHGCVGSSAA*PRTAVHIPFRGVSL Trigger: AAGACTCACGCCCCGGAAAGGGATGTGTACCGCTGTCCGCGGCAAGGCTGCGGAAGAACCTACACAACCGTGTTCAACCTGCAGAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS CAA 90 bp | GCAGGCCTCACAGCCGAGTGCTGGCCCCAGCAGCTGCCACTTACTTaGAGCTTCATCCTCTTCTTGTCGGGATCGTGCACGACACTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGLTAECWPQQLPLT*SFILFLSGSCTTLC Trigger: GCACAGTGTCGTGCACGATCCCGACAAGAAGAGGATGAAGCTCAAAGTAAGTGGCAGCTGCTGGGGCCAGCACTCGGCTGTGAGGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS CCA 72 bp | ATGGACAGACGCCAAGCAGGCCTCACAGCCGAGTGCTaGCCCCAGCAGCTGCCACTTACTTTGAGCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: MDRRQAGLTAEC*PQQLPLTLSFI Trigger: GATGAAGCTCAAAGTAAGTGGCAGCTGCTGGGGCCAGCACTCGGCTGTGAGGCCTGCTTGGCGTCTGTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS TCA 72 bp | CAGCCGAGTGCTGGCCCCAGCAGCTGCCACTTACTTTaGGCTTCATCCTCTTCTTGTCGGGATCGTGCACGA | + |
|
Preference number: 6 (lower is better) Translates to: QPSAGPSSCHLL*ASSSSCRDRAR Trigger: TCGTGCACGATCCCGACAAGAAGAGGATGAAGCTCAAAGTAAGTGGCAGCTGCTGGGGCCAGCACTCGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS CAA 72 bp | ACAGCCGAGTGCTGGCCCCAGCAGCTGCCACTTACTTaGAGCTTCATCCTCTTCTTGTCGGGATCGTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: TAECWPQQLPLT*SFILFLSGSCT Trigger: CGTGCACGATCCCGACAAGAAGAGGATGAAGCTCAAAGTAAGTGGCAGCTGCTGGGGCCAGCACTCGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132102.2 |
||
| CDS CAA 72 bp | TCCCGAGGGGCTCTTACTTTGAGCTTCATCCTCTTCTaGTCGGGATCGTGCACGACACTGTGCCTCATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRGALTLSFILF*SGSCTTLCLMR Trigger: TCTCATGAGGCACAGTGTCGTGCACGATCCCGACAAGAAGAGGATGAAGCTCAAAGTAAGAGCCCCTCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146511.8 |
||
| CDS CAA 72 bp | CTCTGTCCACGTTTTTCCCATGAAAGAACATCCCTTTaGACACAGGTAGCCCTCGTGAACTTTCCCATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LCPRFSHERTSL*TQVALVNFPMP Trigger: CGGCATGGGAAAGTTCACGAGGGCTACCTGTGTCAAAAGGGATGTTCTTTCATGGGAAAAACGTGGACAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS GCA 72 bp | TTCATCCTCTTCTTGTCGGGATCGTGCACGACACTGTaGCTCATGAGACTCTGTTTCATTGCGAATGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FILFLSGSCTTL*LMRLCFIANVL Trigger: CAAGACATTCGCAATGAAACAGAGTCTCATGAGGCACAGTGTCGTGCACGATCCCGACAAGAAGAGGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS TCA 72 bp | TCATGTGTTTCAGGAGCTCTGTCCACGTTTTTCCCATaGAAGAACATCCCTTTTGACACAGGTAGCCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SCVSGALSTFFP*KNIPFDTGSPR Trigger: ACGAGGGCTACCTGTGTCAAAAGGGATGTTCTTTCATGGGAAAAACGTGGACAGAGCTCCTGAAACACATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS CCA 72 bp | CTTGCAACCCTCATAACTGCACACATACTGTTTTTGTaGGTTTCCATGTTTGCGTTCAATGTGTTTCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LATLITAHILFL*VSMFAFNVFLQ Trigger: TTGAAGAAACACATTGAACGCAAACATGGAAACCCACAAAAACAGTATGTGTGCAGTTATGAGGGTTGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||
| CDS CAA 72 bp | CTTCTTGCAACCCTCATAACTGCACACATACTGTTTTaGTGGGTTTCCATGTTTGCGTTCAATGTGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLATLITAHILF*WVSMFAFNVFL Trigger: AAGAAACACATTGAACGCAAACATGGAAACCCACAAAAACAGTATGTGTGCAGTTATGAGGGTTGCAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132102.2 ENSMUST00000146511.8 |
||