Pregenerated sensors for GTF2IRD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015942Ensembl transcript IDs: ENSMUST00000016086.10, ENSMUST00000123941.8, ENSMUST00000135588.8, ENSMUST00000152587.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGCCCGGGGCGACCCGGGCCGCTGAGCACGGATGGCACAAAGGGTaGGCGCCAGGGCGGGCCGGGGCCTGGGCTTACAACTGGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: TPGATRAAEHGWHKG*APGRAGAWAYNWEA Trigger: AGCCTCCCAGTTGTAAGCCCAGGCCCCGGCCCGCCCTGGCGCTCACCCTTTGTGCCATCCGTGCTCAGCGGCCCGGGTCGCCCCGGGCGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR TCA 90 bp | AGGGCGGGCCGGGGCCTGGGCTTACAACTGGGAGGCTGGGGCTTCTaGTGGTCCTGGCTTTGGTTTGCAGACAATCCATCGACTCCGCGC | + |
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Preference number: 1 (lower is better) Translates to: RAGRGLGLQLGGWGF*WSWLWFADNPSTPR Trigger: GCGCGGAGTCGATGGATTGTCTGCAAACCAAAGCCAGGACCATCAGAAGCCCCAGCCTCCCAGTTGTAAGCCCAGGCCCCGGCCCGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR CCA 90 bp | CAGCTGGGCTTCTCCAGGACAGGCCTCCCCATTTCCCAGACACAGTaGCTTCTCTTCAGGCAGCCCTTCCCCCTGGCAGTGCTGTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: QLGFSRTGLPISQTQ*LLFRQPFPLAVLCK Trigger: TTTGCACAGCACTGCCAGGGGGAAGGGCTGCCTGAAGAGAAGCCACTGTGTCTGGGAAATGGGGAGGCCTGTCCTGGAGAAGCCCAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR TCA 90 bp | CCTGGCAGTGCTGTGCAAAGTCTTTCTGGAGATCCTGTCTGGCGTTaGCAAAGGCACAGCCCCGCTCCGTCCCCACCACGTACACGTCTG | + |
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Preference number: 1 (lower is better) Translates to: PGSAVQSLSGDPVWR*QRHSPAPSPPRTRL Trigger: CAGACGTGTACGTGGTGGGGACGGAGCGGGGCTGTGCCTTTGTCAACGCCAGACAGGATCTCCAGAAAGACTTTGCACAGCACTGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR CCA 90 bp | TCTTCAGGCAGCCCTTCCCCCTGGCAGTGCTGTGCAAAGTCTTTCTaGAGATCCTGTCTGGCGTTGACAAAGGCACAGCCCCGCTCCGTC | + |
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Preference number: 1 (lower is better) Translates to: SSGSPSPWQCCAKSF*RSCLALTKAQPRSV Trigger: GACGGAGCGGGGCTGTGCCTTTGTCAACGCCAGACAGGATCTCCAGAAAGACTTTGCACAGCACTGCCAGGGGGAAGGGCTGCCTGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR TCA 90 bp | AGGCTTTACGGTAACAGAGGCAGAAATGGTCCTGCACGGCTCTCCTaGGCAGCTGGGCTTCTCCAGGACAGGCCTCCCCATTTCCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: RLYGNRGRNGPARLS*AAGLLQDRPPHFPD Trigger: GTCTGGGAAATGGGGAGGCCTGTCCTGGAGAAGCCCAGCTGCTCAGGAGAGCCGTGCAGGACCATTTCTGCCTCTGTTACCGTAAAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR TCA 90 bp | GTGAATGATACAGCGCACGGATTTGAGGTCGGCTCCCTTGCAACATaGGGCTGCCCTGGCTCTGAGCTTTGTCACCAGCCCGCTGTTGGC | + |
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Preference number: 1 (lower is better) Translates to: VNDTAHGFEVGSLAT*GCPGSELCHQPAVG Trigger: GCCAACAGCGGGCTGGTGACAAAGCTCAGAGCCAGGGCAGCCTCATGTTGCAAGGGAGCCGACCTCAAATCCGTGCGCTGTATCATTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152587.2 |
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| 3UTR TCA 90 bp | TGTGTGCTTGTGGTAGTGGCTAGACAGTTGGAAGAAGCTGAGAGTTaGGGAGACTCTCGCCTCACTGGCTGCTCCCTCCGCGGACCAGGT | + |
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Preference number: 1 (lower is better) Translates to: CVLVVVARQLEEAES*GDSRLTGCSLRGPG Trigger: ACCTGGTCCGCGGAGGGAGCAGCCAGTGAGGCGAGAGTCTCCTCAACTCTCAGCTTCTTCCAACTGTCTAGCCACTACCACAAGCACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR CCA 90 bp | CCAGGACCTTCAGGTTTAGTGCTGTGCTTTCGCTGTTGTTGGAGGTaGCAGACACAGGGATGGAGGGGAAGAAGGTCACGGACAGACCCA | + |
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Preference number: 1 (lower is better) Translates to: PGPSGLVLCFRCCWR*QTQGWRGRRSRTDP Trigger: TGGGTCTGTCCGTGACCTTCTTCCCCTCCATCCCTGTGTCTGCCACCTCCAACAACAGCGAAAGCACAGCACTAAACCTGAAGGTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR TCA 90 bp | ACAATCCGGGACTGCCCGCCCAGGATGGCAGTGCCCACATTGGGCTaGGGCCTCTCATATCTATTAAGCAAGAAAATGCCCCCACAGACT | + |
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Preference number: 1 (lower is better) Translates to: TIRDCPPRMAVPTLG*GLSYLLSKKMPPQT Trigger: AGTCTGTGGGGGCATTTTCTTGCTTAATAGATATGAGAGGCCTCAGCCCAATGTGGGCACTGCCATCCTGGGCGGGCAGTCCCGGATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR CCA 90 bp | TCATCTCCAGGACCTTCAGGTTTAGTGCTGTGCTTTCGCTGTTGTTaGAGGTGGCAGACACAGGGATGGAGGGGAAGAAGGTCACGGACA | + |
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Preference number: 1 (lower is better) Translates to: SSPGPSGLVLCFRCC*RWQTQGWRGRRSRT Trigger: TGTCCGTGACCTTCTTCCCCTCCATCCCTGTGTCTGCCACCTCCAACAACAGCGAAAGCACAGCACTAAACCTGAAGGTCCTGGAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR CCA 90 bp | TGTACTCCTTGGACACCGACACGCTCTGCTTGCAGATCAAACACGTaGGGATGTTCTGCACCTCCACGAAGAAATAGGCTCGCTCCCACT | + |
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Preference number: 1 (lower is better) Translates to: CTPWTPTRSACRSNT*GCSAPPRRNRLAPT Trigger: AGTGGGAGCGAGCCTATTTCTTCGTGGAGGTGCAGAACATCCCCACGTGTTTGATCTGCAAGCAGAGCGTGTCGGTGTCCAAGGAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135588.8 |
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| 3UTR CCA 90 bp | GTGGATGAGTGGCATGGGTCAGTGAAGCCAAGAGGAGCCAGCCACTaGACCTACAACTGTTATGGGCTTTACCAAACTACAGACAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: VDEWHGSVKPRGASH*TYNCYGLYQTTDRC Trigger: ACACCTGTCTGTAGTTTGGTAAAGCCCATAACAGTTGTAGGTCCAGTGGCTGGCTCCTCTTGGCTTCACTGACCCATGCCACTCATCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| 3UTR CCA 90 bp | CATCTTTCACAGTGGGTTTATTTGAAACAGGACAGCGTGGATGAGTaGCATGGGTCAGTGAAGCCAAGAGGAGCCAGCCACTGGACCTAC | + |
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Preference number: 1 (lower is better) Translates to: HLSQWVYLKQDSVDE*HGSVKPRGASHWTY Trigger: GTAGGTCCAGTGGCTGGCTCCTCTTGGCTTCACTGACCCATGCCACTCATCCACGCTGTCCTGTTTCAAATAAACCCACTGTGAAAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGCATCCATCATGGCCGGCGTGCCCGTGGAGGCCACGCTCACCAGCTTGGGGGGAATGGTTGCTCTaGACACACGATCTCCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: CWHPSWPACPWRPRSPAWGEWLL*THDLRG Trigger: GCCTCGGAGATCGTGTGTCCAGAGCAACCATTCCCC...CCAAGCTGGTGAGCGTGGCCTCCACGGGCACGCCGGCCATGATGGATGCCAACA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000152587.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGATGGAGGGGAAGAAGGTCACGGACAGACCCAGTGAGGTGCCCAAAGATCCTGCACGGCTCTCCTaGGCAGCTGGGCTTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: TGMEGKKVTDRPSEVPKDPARLS*AAGLLQ Trigger: CTGGAGAAGCCCAGCTGCTCAGGAGAGCCGTGCAGG...ATCTTTGGGCACCTCACTGGGTCTGTCCGTGACCTTCTTCCCCTCCATCCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTTTGGTTTGCAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCCCAAGGCCACCCAGCTaGCTCTCTGCACCTAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LALVCRQSIDSARQTTARPRPPS*LSAPRK Trigger: CTTCCTAGGTGCAGAGAGCCAGCTGGGTGGCCTTGG...GCGGGCTGTGGTTTGACGCGCGGAGTCGATGGATTGTCTGCAAACCAAAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGATGGAGGGGAAGAAGGTCACGGACAGACCCAGTGAGGTGCCCAAAGATGATCCTGTCTGGCGTTaGCAAAGGCACAGCCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: TGMEGKKVTDRPSEVPKDDPVWR*QRHSPA Trigger: AGCGGGGCTGTGCCTTTGTCAACGCCAGACAGGATC...ATCTTTGGGCACCTCACTGGGTCTGTCCGTGACCTTCTTCCCCTCCATCCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTTTGGTTTGCAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCCTTCCGACTCCGTCTTaGTTAGCATGGCTGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LALVCRQSIDSARQTTARLPTPS*LAWLLP Trigger: GGGCAGCAGCCATGCTAATCAAGACGGAGTCGGAAG...GCGGGCTGTGGTTTGACGCGCGGAGTCGATGGATTGTCTGCAAACCAAAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAGGAACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCAGACTCTCGCCTCACTaGCTGCTCCCTCCGCGGACC | + |
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Preference number: 2 (lower is better) Translates to: KAGTGGRNSSRGHGGTVLRLSPH*LLPPRT Trigger: GGTCCGCGGAGGGAGCAGCCAGTGAGGCGAGAGTCT...GAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGTTCCTGCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGATGGAGGGGAAGAAGGTCACGGACAGACCCAGTGAGGTGCCCAAAGATAGGCAGAAATGGTCCTaGACGGCTCTCCTGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TGMEGKKVTDRPSEVPKDRQKWS*TALLSS Trigger: GCTGCTCAGGAGAGCCGTGCAGGACCATTTCTGCCT...ATCTTTGGGCACCTCACTGGGTCTGTCCGTGACCTTCTTCCCCTCCATCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTTTGGTTTGCAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCAAGGCTGTAATTGTCTaGGTGCTGGAAGGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LALVCRQSIDSARQTTARKAVIV*VLEGQA Trigger: GGCCTGGCCTTCCAGCACCCAGACAATTACAGCCTT...GCGGGCTGTGGTTTGACGCGCGGAGTCGATGGATTGTCTGCAAACCAAAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACTGGCTTGTGGGCAAAGTGGGTGTaGGAAACAGGCCTGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: TGGRNSSRGHGGTVLTGLWAKWV*ETGLGG Trigger: TCCTCCCAGGCCTGTTTCCCACACCCACTTTGCCCA...CAAGCCAGTGAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACTGGCTTGTCTTGGGCTCTGAGCTaGCTTGGCTGTGCGATTCTG | + |
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Preference number: 2 (lower is better) Translates to: TGGRNSSRGHGGTVLTGLSWALS*LGCAIL Trigger: CAGAATCGCACAGCCAAGTCAGCTCAGAGCCCAAGA...CAAGCCAGTGAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACTGGCTTGCCTTCCCCCTGGCAGTaGTGTGCAAAGTCTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: TGGRNSSRGHGGTVLTGLPSPWQ*CAKSFW Trigger: CCAGAAAGACTTTGCACAGCACTGCCAGGGGGAAGG...CAAGCCAGTGAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR CAA 90 bp | TTCATCTCCAGGACCTTCAGGTTTAGTGCTGTGCTTTCGCTGTTGTaGGAGGTGGCAGACACAGGGATGGAGGGGAAGAAGGTCACGGAC | + |
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Preference number: 2 (lower is better) Translates to: FISRTFRFSAVLSLL*EVADTGMEGKKVTD Trigger: GTCCGTGACCTTCTTCCCCTCCATCCCTGTGTCTGCCACCTCCAACAACAGCGAAAGCACAGCACTAAACCTGAAGGTCCTGGAGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCCCAAGGCTTTACGGTAACAGAGGCAGAAATGGTCCTGCACGGCTCTCCAGGTGTGTAGCTCCATaGTGCACTGAAGGACACCCT | + |
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Preference number: 2 (lower is better) Translates to: LSPRLYGNRGRNGPARLSRCVAP*CTEGHP Trigger: AGGGTGTCCTTCAGTGCAGCATGGAGCTACACACCT...GGAGAGCCGTGCAGGACCATTTCTGCCTCTGTTACCGTAAAGCCTTGGGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTTTGGTTTGCAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCGAACTTGATGAAGTCTaGAGCATCCAGGATCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LALVCRQSIDSARQTTARELDEV*SIQDPP Trigger: AGGAGGATCCTGGATGCTGCAGACTTCATCAAGTTC...GCGGGCTGTGGTTTGACGCGCGGAGTCGATGGATTGTCTGCAAACCAAAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTTTGGTTTGCAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCTGTGCAAAGTCTTTCTaGAGATCCTGTCTGGCGTTG | + |
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Preference number: 2 (lower is better) Translates to: LALVCRQSIDSARQTTARCAKSF*RSCLAL Trigger: CAACGCCAGACAGGATCTCCAGAAAGACTTTGCACA...GCGGGCTGTGGTTTGACGCGCGGAGTCGATGGATTGTCTGCAAACCAAAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGCACCGCATTACTGAGTTCAAGTCCAGGAAGTGGTCTAATGACCGTGAAGCTCTCCTGAGCAGCTaGGCTTCTCCAGGACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: ILHRITEFKSRKWSNDREALLSS*ASPGQA Trigger: GGCCTGTCCTGGAGAAGCCCAGCTGCTCAGGAGAGC...TTCACGGTCATTAGACCACTTCCTGGACTTGAACTCAGTAATGCGGTGCAGGAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACTGGCTTGTGCTTTCGCTGTTGTTaGAGGTGGCAGACACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TGGRNSSRGHGGTVLTGLCFRCC*RWQTQG Trigger: TCCCTGTGTCTGCCACCTCCAACAACAGCGAAAGCA...CAAGCCAGTGAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR CAA 90 bp | AGTTTCATCTCCAGGACCTTCAGGTTTAGTGCTGTGCTTTCGCTGTaGTTGGAGGTGGCAGACACAGGGATGGAGGGGAAGAAGGTCACG | + |
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Preference number: 2 (lower is better) Translates to: SFISRTFRFSAVLSL*LEVADTGMEGKKVT Trigger: CGTGACCTTCTTCCCCTCCATCCCTGTGTCTGCCACCTCCAACAACAGCGAAAGCACAGCACTAAACCTGAAGGTCCTGGAGATGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGTAAGAGATCCATCAGTGAGGCAACTCAAAGCAGGAACTGGGGGCAGAAACGCTGTTGTTGGAGGTaGCAGACACAGGGATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LGKRSISEATQSRNWGQKRCCWR*QTQGWR Trigger: CCTCCATCCCTGTGTCTGCCACCTCCAACAACAGCG...TTTCTGCCCCCAGTTCCTGCTTTGAGTTGCCTCACTGATGGATCTCTTACCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAGGAACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACAGTTGGAAGAAGCTaGGAGTTGAGGAGACTCTCG | + |
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Preference number: 2 (lower is better) Translates to: KAGTGGRNSSRGHGGTVLTVGRS*ELRRLS Trigger: CGAGAGTCTCCTCAACTCTCAGCTTCTTCCAACTGT...GAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGTTCCTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAGGAACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCGTCCTGGCTTTGGTTTaGAGACAATCCATCGACTCC | + |
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Preference number: 2 (lower is better) Translates to: KAGTGGRNSSRGHGGTVLVLALV*RQSIDS Trigger: GGAGTCGATGGATTGTCTGCAAACCAAAGCCAGGAC...GAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGTTCCTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGCACCGCATTACTGAGTTCAAGTCCAGGAAGTGGTCTAATGACCGTGAAAGGGAACAGGGACCATaGCTGTTGTCCCCAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ILHRITEFKSRKWSNDREREQGP*LLSPRL Trigger: AAGCCTTGGGGACAACAGCCATGGTCCCTGTTCCCT...TTCACGGTCATTAGACCACTTCCTGGACTTGAACTCAGTAATGCGGTGCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACTGGCTTGTTGGCTGTGCGATTCTaGAGTCTTCTGTCCTCATTA | + |
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Preference number: 2 (lower is better) Translates to: TGGRNSSRGHGGTVLTGLLAVRF*SLLSSL Trigger: TAATGAGGACAGAAGACTCCAGAATCGCACAGCCAA...CAAGCCAGTGAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGGTCATGTTGATGGGCAAAGTGGGTGTGGGAAACAGGCCTGGGAGGATTTTCAAGTCCAGGAAGTaGTCTAATGACCGTGAACTT | + |
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Preference number: 2 (lower is better) Translates to: ARVMLMGKVGVGNRPGRIFKSRK*SNDREL Trigger: AAGTTCACGGTCATTAGACCACTTCCTGGACTTGAA...AATCCTCCCAGGCCTGTTTCCCACACCCACTTTGCCCATCAACATGACCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | CTATTAAGCAAGAAAATGCCCCCACAGACTTGCTTTCAGCCCATTCTGATGGAGGGCTCTGAGCTGACTTaGCTGTGCGATTCTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: LLSKKMPPQTCFQPILMEGSELT*LCDSGV Trigger: GACTCCAGAATCGCACAGCCAAGTCAGCTCAGAGCC...CTCCATCAGAATGGGCTGAAAGCAAGTCTGTGGGGGCATTTTCTTGCTTAATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR TCA 90 bp | CTATTAAGCAAGAAAATGCCCCCACAGACTTGCTTTCAGCCCATTCTGATGGAGGAAGAAGCTGAGAGTTaGGGAGACTCTCGCCTCACT | + |
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Preference number: 2 (lower is better) Translates to: LLSKKMPPQTCFQPILMEEEAES*GDSRLT Trigger: AGTGAGGCGAGAGTCTCCTCAACTCTCAGCTTCTTC...CTCCATCAGAATGGGCTGAAAGCAAGTCTGTGGGGGCATTTTCTTGCTTAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGGTCATGTTGATGGGCAAAGTGGGTGTGGGAAACAGGCCTGGGAGGATTCAGAGTTTACAAGGTTaGATGGACTTGCATTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: ARVMLMGKVGVGNRPGRIQSLQG*MDLHFL Trigger: AAGGAAATGCAAGTCCATCCAACCTTGTAAACTCTG...AATCCTCCCAGGCCTGTTTCCCACACCCACTTTGCCCATCAACATGACCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR-3UTR CCA 90 bp | TCGATGGCGATGGAGTACGCCACAAAGGAGCGGATTTTCTGTCTTAACTTCTCCACTTGCATTGGGGAATaGTTGCTCTGGACACACGAT | + |
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Preference number: 2 (lower is better) Translates to: SMAMEYATKERIFCLNFSTCIGE*LLWTHD Trigger: ATCGTGTGTCCAGAGCAACCATTCCCCAATGCAAGT...GGAGAAGTTAAGACAGAAAATCCGCTCCTTTGTGGCGTACTCCATCGCCATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135588.8 ENSMUST00000152587.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGTACGCCACAAAGGAGCGGATTTTCTGTCTTAACTTCTCCCATAAGCTCACTTGCATTGGGGAATaGTTGCTCTGGACACACGAT | + |
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Preference number: 2 (lower is better) Translates to: MEYATKERIFCLNFSHKLTCIGE*LLWTHD Trigger: ATCGTGTGTCCAGAGCAACCATTCCCCAATGCAAGT...GAGCTTATGGGAGAAGTTAAGACAGAAAATCCGCTCCTTTGTGGCGTACTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135588.8 ENSMUST00000152587.2 |
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| 3UTR TCA 72 bp | TCCACCCGTGCCCCGGGAACAGCGACTCCGGGGCACTaGCACTTGCATCCTGCTGGGCCAGGTCGACCATCC | + |
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Preference number: 3 (lower is better) Translates to: STRAPGTATPGH*HLHPAGPGRPS Trigger: GGATGGTCGACCTGGCCCAGCAGGATGCAAGTGTCAGTGCCCCGGAGTCGCTGTTCCCGGGGCACGGGTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR CCA 72 bp | CGGCCACCTCTTCCGCCGGCTGCACCGCGGAGTTCGTaGGGGGACTTGCATTGGGGAATGGTTGCTCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: RPPLPPAAPRSS*GDLHWGMVALD Trigger: GTCCAGAGCAACCATTCCCCAATGCAAGTCCCCCCACGAACTCCGCGGTGCAGCCGGCGGAAGAGGTGGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135588.8 ENSMUST00000152587.2 |
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| 3UTR TCA 72 bp | GGTAACAGAGGCAGAAATGGTCCTGCACGGCTCTCCTaGGCAGCTGGGCTTCTCCAGGACAGGCCTCCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GNRGRNGPARLS*AAGLLQDRPPH Trigger: ATGGGGAGGCCTGTCCTGGAGAAGCCCAGCTGCTCAGGAGAGCCGTGCAGGACCATTTCTGCCTCTGTTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
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| 3UTR TCA 72 bp | GGTCGGCTCCCTTGCAACATGAGGCTGCCCTGGCTCTaGGCTTTGTCACCAGCCCGCTGTTGGCATCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GRLPCNMRLPWL*ALSPARCWHPS Trigger: TGATGGATGCCAACAGCGGGCTGGTGACAAAGCTCAGAGCCAGGGCAGCCTCATGTTGCAAGGGAGCCGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152587.2 |
||
| 3UTR TCA 72 bp | ACAGCGCACGGATTTGAGGTCGGCTCCCTTGCAACATaGGGCTGCCCTGGCTCTGAGCTTTGTCACCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TAHGFEVGSLAT*GCPGSELCHQP Trigger: GGGCTGGTGACAAAGCTCAGAGCCAGGGCAGCCTCATGTTGCAAGGGAGCCGACCTCAAATCCGTGCGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152587.2 |
||
| 3UTR CCA 72 bp | AGGCAGAAATGGTCCTGCACGGCTCTCCTGAGCAGCTaGGCTTCTCCAGGACAGGCCTCCCCATTTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RQKWSCTALLSS*ASPGQASPFPR Trigger: TCTGGGAAATGGGGAGGCCTGTCCTGGAGAAGCCCAGCTGCTCAGGAGAGCCGTGCAGGACCATTTCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR TCA 72 bp | GCTGTGCAAAGTCTTTCTGGAGATCCTGTCTGGCGTTaGCAAAGGCACAGCCCCGCTCCGTCCCCACCACGT | + |
|
Preference number: 3 (lower is better) Translates to: AVQSLSGDPVWR*QRHSPAPSPPR Trigger: ACGTGGTGGGGACGGAGCGGGGCTGTGCCTTTGTCAACGCCAGACAGGATCTCCAGAAAGACTTTGCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR TCA 72 bp | CTCTCGCCTCACTGGCTGCTCCCTCCGCGGACCAGGTaGACCGTATGTAACCATCAAAGCGTACGCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSPHWLLPPRTR*TVCNHQSVRCC Trigger: ACAGCAGCGTACGCTTTGATGGTTACATACGGTTCACCTGGTCCGCGGAGGGAGCAGCCAGTGAGGCGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR TCA 72 bp | GTGGTAGTGGCTAGACAGTTGGAAGAAGCTGAGAGTTaGGGAGACTCTCGCCTCACTGGCTGCTCCCTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: VVVARQLEEAES*GDSRLTGCSLR Trigger: GCGGAGGGAGCAGCCAGTGAGGCGAGAGTCTCCTCAACTCTCAGCTTCTTCCAACTGTCTAGCCACTACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR CCA 72 bp | GGTTGGTCTGGTAGTGGCGGCGCAGGTTGTACTCCTTaGACACCGACACGCTCTGCTTGCAGATCAAACACG | + |
|
Preference number: 3 (lower is better) Translates to: GWSGSGGAGCTP*TPTRSACRSNT Trigger: CGTGTTTGATCTGCAAGCAGAGCGTGTCGGTGTCCAAGGAGTACAACCTGCGCCGCCACTACCAGACCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135588.8 |
||
| 3UTR TCA 72 bp | GCTGCTGTTGAAGAGGACGAGATGTCCCTGTCTCTCTaGGTGGGTTTGGGGAACCTCTCTTGGGCTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: AAVEEDEMSLSL*VGLGNLSWALS Trigger: GCTCAGAGCCCAAGAGAGGTTCCCCAAACCCACTCAGAGAGACAGGGACATCTCGTCCTCTTCAACAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCAGGAACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACCTCGGCCTTGGACTaGGCCAGCTCTTTACACTCC | + |
|
Preference number: 3 (lower is better) Translates to: KAGTGGRNSSRGHGGTVLTSALD*ASSLHS Trigger: GGAGTGTAAAGAGCTGGCCAAGTCCAAGGCCGAGGT...GAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGTTCCTGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACTGGCTTGTTTGGGGAACCTCTCTaGGGCTCTGAGCTGACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TGGRNSSRGHGGTVLTGLFGEPL*GSELTW Trigger: CCAAGTCAGCTCAGAGCCCAAGAGAGGTTCCCCAAA...CAAGCCAGTGAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR TCA 72 bp | GACTGCCCGCCCAGGATGGCAGTGCCCACATTGGGCTaGGGCCTCTCATATCTATTAAGCAAGAAAATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DCPPRMAVPTLG*GLSYLLSKKMP Trigger: GGGCATTTTCTTGCTTAATAGATATGAGAGGCCTCAGCCCAATGTGGGCACTGCCATCCTGGGCGGGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR CCA 72 bp | AGACACAGTGGCTTCTCTTCAGGCAGCCCTTCCCCCTaGCAGTGCTGTGCAAAGTCTTTCTGGAGATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RHSGFSSGSPSP*QCCAKSFWRSC Trigger: ACAGGATCTCCAGAAAGACTTTGCACAGCACTGCCAGGGGGAAGGGCTGCCTGAAGAGAAGCCACTGTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR CCA 72 bp | AGTTTTCACACTGACAGGGCCATAGCTGTCATTTGGTaGTACTGTCGGCCTCCCAGCATCTGTCACCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SFHTDRAIAVIW*YCRPPSICHHP Trigger: GGGATGGTGACAGATGCTGGGAGGCCGACAGTACCACCAAATGACAGCTATGGCCCTGTCAGTGTGAAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR CCA 72 bp | TGGACACCGACACGCTCTGCTTGCAGATCAAACACGTaGGGATGTTCTGCACCTCCACGAAGAAATAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WTPTRSACRSNT*GCSAPPRRNRL Trigger: GAGCCTATTTCTTCGTGGAGGTGCAGAACATCCCCACGTGTTTGATCTGCAAGCAGAGCGTGTCGGTGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135588.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGTAAGAGATCCATCAGTGAGGCAACTCAAAGCAGGAACTGGGGGCAGAAAGTGCTTTCGCTGTTGTaGGAGGTGGCAGACACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGKRSISEATQSRNWGQKVLSLL*EVADTG Trigger: CCCTGTGTCTGCCACCTCCAACAACAGCGAAAGCAC...TTTCTGCCCCCAGTTCCTGCTTTGAGTTGCCTCACTGATGGATCTCTTACCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR CCA 72 bp | AAGTTGTCGTCGACGCCGCGGATGAAGATGGCCAGCTaGGTGGTGTCATTGATATCCGTAATCTCATCGATG | + |
|
Preference number: 3 (lower is better) Translates to: KLSSTPRMKMAS*VVSLISVISSM Trigger: CATCGATGAGATTACGGATATCAATGACACCACCCAGCTGGCCATCTTCATCCGCGGCGTCGACGACAACTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135588.8 ENSMUST00000152587.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACTGGCTTGCTAATGACCGTGAACTaGATGAAGTCTGCAGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TGGRNSSRGHGGTVLTGLLMTVN*MKSAAS Trigger: GGATGCTGCAGACTTCATCAAGTTCACGGTCATTAG...CAAGCCAGTGAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGTACGCCACAAAGGAGCGGATTTTCTGTCTTAACTTCTCCCATAAGCTCCGCAGGTTGTACTCCTaGGACACCGACACGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: MEYATKERIFCLNFSHKLRRLYS*DTDTLC Trigger: GCAGAGCGTGTCGGTGTCCAAGGAGTACAACCTGCG...GAGCTTATGGGAGAAGTTAAGACAGAAAATCCGCTCCTTTGTGGCGTACTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135588.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACTGGCTTGCTCTTGAAGTTTCCCTaGCCTGCATTCCACTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: TGGRNSSRGHGGTVLTGLLLKFP*PAFHLL Trigger: TAACAAGTGGAATGCAGGCAAGGGAAACTTCAAGAG...CAAGCCAGTGAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR GCA 72 bp | AGAGTTTCATCTCCAGGACCTTCAGGTTTAGTGCTGTaGTTTCGCTGTTGTTGGAGGTGGCAGACACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RVSSPGPSGLVL*FRCCWRWQTQG Trigger: TCCCTGTGTCTGCCACCTCCAACAACAGCGAAAGCACAGCACTAAACCTGAAGGTCCTGGAGATGAAACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR CCA 72 bp | TTCAGTTTTCACACTGACAGGGCCATAGCTGTCATTTaGTGGTACTGTCGGCCTCCCAGCATCTGTCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: FSFHTDRAIAVI*WYCRPPSICHH Trigger: ATGGTGACAGATGCTGGGAGGCCGACAGTACCACCAAATGACAGCTATGGCCCTGTCAGTGTGAAAACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR CCA 72 bp | TCTTCTCAACGCGCAGGAATATCTCATTCCCGGATTTaGCGCCTGTCATGGGCACAGTGTCCAAAAGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSQRAGISHSRI*RLSWAQCPKVP Trigger: AGGAACTTTTGGACACTGTGCCCATGACAGGCGCCAAATCCGGGAATGAGATATTCCTGCGCGTTGAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152587.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCGATGGCGATGGAGTACGCCACAAAGGAGCGGATTTTCTGTCTTAACTTCTTGCATTGGGGAATGGTaGCTCTGGACACACGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: HRWRWSTPQRSGFSVLTSCIGEW*LWTHDL Trigger: GAGATCGTGTGTCCAGAGCAACCATTCCCCAATGCA...AGAAGTTAAGACAGAAAATCCGCTCCTTTGTGGCGTACTCCATCGCCATCGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135588.8 ENSMUST00000152587.2 |
||
| 3UTR TCA 72 bp | ACTACAGACAGGTGTCACAGGTCATCTGAACAGCTGTaGTGTGTAAACTGGGATTCCGACTCAAAGTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TTDRCHRSSEQL*CVNWDSDSKWG Trigger: CCCCCACTTTGAGTCGGAATCCCAGTTTACACATCACAGCTGTTCAGATGACCTGTGACACCTGTCTGTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGGGCAGAAACTCAAGTAGAGGCCATGGAGGAACAGTGCTCACTGGCTTGTCATATTACAAGCCTTaGGTCCTATCCTTACAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: TGGRNSSRGHGGTVLTGLSYYKP*VLSLQY Trigger: ATACTGTAAGGATAGGACCAAAGGCTTGTAATATGA...CAAGCCAGTGAGCACTGTTCCTCCATGGCCTCTACTTGAGTTTCTGCCCCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR TCA 72 bp | GCATTCCACTTGTTATGTAAATATATGCTTAGGACCTaGGGGGTGCGAGTCCCTCTTAACCCACTTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AFHLLCKYMLRT*GVRVPLNPLAE Trigger: CTCAGCAAGTGGGTTAAGAGGGACTCGCACCCCTCAGGTCCTAAGCATATATTTACATAACAAGTGGAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR TCA 72 bp | TTTGGTAAAACCTCAATAGAGGCTACACTTCCCAGATaGCAGCTTAGGCAAAACCAACTAAGCCCAGCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: FGKTSIEATLPR*QLRQNQLSPAC Trigger: GCACGCTGGGCTTAGTTGGTTTTGCCTAAGCTGTCATCTGGGAAGTGTAGCCTCTATTGAGGTTTTACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGTAAGAGATCCATCAGTGAGGCAACTCAAAGCAGGAACTGGGGGCAGAAACAAGGTTGGATGGACTaGCATTTCCTTCCATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGKRSISEATQSRNWGQKQGWMD*HFLPFL Trigger: TAAAAATGGAAGGAAATGCAAGTCCATCCAACCTTG...TTTCTGCCCCCAGTTCCTGCTTTGAGTTGCCTCACTGATGGATCTCTTACCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR CAA 72 bp | GCTGCCCTGGCTCTGAGCTTTGTCACCAGCCCGCTGTaGGCATCCATCATGGCCGGCGTGCCCGTGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AALALSFVTSPL*ASIMAGVPVEA Trigger: GGCCTCCACGGGCACGCCGGCCATGATGGATGCCAACAGCGGGCTGGTGACAAAGCTCAGAGCCAGGGCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152587.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAACAGGACAGCGTGGATGAGTGGCATGGGTCAGTGAAGCCAAGAGGAGCCGGCTCCCTTGCAACATaGGGCTGCCCTGGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKQDSVDEWHGSVKPRGAGSLAT*GCPGSE Trigger: CTCAGAGCCAGGGCAGCCTCATGTTGCAAGGGAGCC...GGCTCCTCTTGGCTTCACTGACCCATGCCACTCATCCACGCTGTCCTGTTTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR TCA 90 bp | TTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCAGTAGTGGGATTGAAGGCTCCGATCCTGTCTGGCGTTaGCAAAGGCACAGCCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKLRSSCLGLRSSGIEGSDPVWR*QRHSPA Trigger: AGCGGGGCTGTGCCTTTGTCAACGCCAGACAGGATC...GGAGCCTTCAATCCCACTACTGCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | GGGAAGTCCACTCCGATCGCCTCCCCAAACTTGCGGCTGAAGAGGTCGTTTACTACGTCACCACCATCCTaGCGTCTGAGGGCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKSTPIASPNLRLKRSFTTSPPS*RLRAHQ Trigger: CTGATGAGCCCTCAGACGGCAGGATGGTGGTGACGT...AGTAAACGACCTCTTCAGCCGCAAGTTTGGGGAGGCGATCGGAGTGGACTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCCCAAGCTGACCTCAAATTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCAGTGCTGCGCCCCACTaGGCCTCTTTCTTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAQADLKFKLRSSCLGLRSAAPH*ASFLLS Trigger: GCTGAGCAAGAAAGAGGCGCAGTGGGGCGCAGCACT...GCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAATTTGAGGTCAGCTTGGGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | GTAGCCCAAGCTGACCTCAAATTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCCCAAGGCCACCCAGCTaGCTCTCTGCACCTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAQADLKFKLRSSCLGLRPRPPS*LSAPRK Trigger: CTTCCTAGGTGCAGAGAGCCAGCTGGGTGGCCTTGG...GCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAATTTGAGGTCAGCTTGGGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | TTGAAACAGGACAGCGTGGATGAGTGGCATGGGTCAGTGAAGCCAAGAGGAGCCACGTCACCACCATCCTaGCGTCTGAGGGCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKQDSVDEWHGSVKPRGATSPPS*RLRAHQ Trigger: CTGATGAGCCCTCAGACGGCAGGATGGTGGTGACGT...GGCTCCTCTTGGCTTCACTGACCCATGCCACTCATCCACGCTGTCCTGTTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | GTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCCGTGGCCACCTGGAGTaGTGCGCCCCACTGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VWNILGLHIEEWPDFLPFRGHLE*CAPLRL Trigger: GAGGCGCAGTGGGGCGCAGCACTCCAGGTGGCCACG...GAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTGGCCGGCGTGCCCGTaGAGGCCACGCTCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLEHSRSPHRGMARFPSWPACP*RPRSPA Trigger: AGCTGGTGAGCGTGGCCTCCACGGGCACGCCGGCCA...GGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| 3UTR CAA 72 bp | GCAAAGTGGGTGTGGGAAACAGGCCTGGGAGGATTCTaGACCCCCACGCAGCTCTTGAAGTTTCCCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKWVWETGLGGF*TPTQLLKFPLP Trigger: AGGCAAGGGAAACTTCAAGAGCTGCGTGGGGGTCAAGAATCCTCCCAGGCCTGTTTCCCACACCCACTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAACAGGACAGCGTGGATGAGTGGCATGGGTCAGTGAAGCCAAGAGGAGCCCCGACACGCTCTGCTTaGAGATCAAACACGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKQDSVDEWHGSVKPRGAPTRSA*RSNTWG Trigger: TCCCCACGTGTTTGATCTGCAAGCAGAGCGTGTCGG...GGCTCCTCTTGGCTTCACTGACCCATGCCACTCATCCACGCTGTCCTGTTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| 3UTR CAA 72 bp | AAGCTGACCTCAAATTCAAACTCAGATCCTCCTGCCTaGGCCTCCGCAGTAGTGGGATTGAAGGCTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLTSNSNSDPPA*ASAVVGLKAPP Trigger: GGGCGGAGCCTTCAATCCCACTACTGCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAATTTGAGGTCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| 3UTR CAA 72 bp | TTCACGGGGAAGTCCACTCCGATCGCCTCCCCAAACTaGCGGCTGAAGAGGTCGTTTACTTGTTCTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTGKSTPIASPN*RLKRSFTCSRS Trigger: ACTGCGAGAACAAGTAAACGACCTCTTCAGCCGCAAGTTTGGGGAGGCGATCGGAGTGGACTTCCCCGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| CDS-3UTR TCA 90 bp | TCGTCTCACAGGCTATTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGCCTGCACGGCTCTCCTaGGCAGCTGGGCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSHRLLGLEHSRSPHRGMPARLS*AAGLLQ Trigger: CTGGAGAAGCCCAGCTGCTCAGGAGAGCCGTGCAGG...CATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAATAGCCTGTGAGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR TCA 90 bp | TTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCAGGCTGCCCTGGCTCTaGGCTTTGTCACCAGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLEHSRSPHRGMARFPSRLPWL*ALSPAR Trigger: GCGGGCTGGTGACAAAGCTCAGAGCCAGGGCAGCCT...GGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | ACCTCAAATTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCAGTAGTGGGATTGGGGGAATGGTTGCTCTaGACACACGATCTCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSNSNSDPPALASAVVGLGEWLL*THDLRG Trigger: GCCTCGGAGATCGTGTGTCCAGAGCAACCATTCCCC...CAATCCCACTACTGCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAATTTGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| 3UTR CAA 72 bp | AGGACCTTCAGGTTTAGTGCTGTGCTTTCGCTGTTGTaGGAGGTGGCAGACACAGGGATGGAGGGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTFRFSAVLSLL*EVADTGMEGKK Trigger: CTTCTTCCCCTCCATCCCTGTGTCTGCCACCTCCAACAACAGCGAAAGCACAGCACTAAACCTGAAGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCAAATTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCAGTAGTGGGATTGTTGTTCCTGGCCAGATaGGTCTCCCAGAGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSNSNSDPPALASAVVGLLFLAR*VSQRHS Trigger: ACTGTGCCTCTGGGAGACGCATCTGGCCAGGAACAA...CAATCCCACTACTGCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAATTTGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCGCTCTCCTGAGCAGCTaGGCTTCTCCAGGACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLEHSRSPHRGMARFPSALLSS*ASPGQA Trigger: GGCCTGTCCTGGAGAAGCCCAGCTGCTCAGGAGAGC...GGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCAGTAGTGGGATTGAAGGCTCCGGATCCACTTCAGGGTaGCAAGGCTGTAATTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKLRSSCLGLRSSGIEGSGSTSG*QGCNCL Trigger: CAGACAATTACAGCCTTGCCACCCTGAAGTGGATCC...GGAGCCTTCAATCCCACTACTGCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| 3UTR CAA 72 bp | ACAGGCCTGGGAGGATTCTTGACCCCCACGCAGCTCTaGAAGTTTCCCTTGCCTGCATTCCACTTGTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: TGLGGFLTPTQL*KFPLPAFHLLC Trigger: ACATAACAAGTGGAATGCAGGCAAGGGAAACTTCAAGAGCTGCGTGGGGGTCAAGAATCCTCCCAGGCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| 3UTR CAA 72 bp | CTCTTCTCAACGCGCAGGAATATCTCATTCCCGGATTaGGCGCCTGTCATGGGCACAGTGTCCAAAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSTRRNISFPD*APVMGTVSKSS Trigger: GGAACTTTTGGACACTGTGCCCATGACAGGCGCCAAATCCGGGAATGAGATATTCCTGCGCGTTGAGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152587.2 |
||
| CDS-3UTR GCA 90 bp | ACCTCAAATTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCAGTAGTGGGATTGCTGCCCTTGGTGAAGTaGCAGAATCTTCCATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSNSNSDPPALASAVVGLLPLVK*QNLPWV Trigger: AACCCATGGAAGATTCTGGCACTTCACCAAGGGCAG...CAATCCCACTACTGCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAATTTGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | ACAAAGGAGCGGATTTTCTGTCTTAACTTCTCCCATAAGCTCCCGGCCACCTCTCAGGCTGGGCAGAGCTaGACCATTACTGAGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKERIFCLNFSHKLPATSQAGQS*TITEFK Trigger: CTTGAACTCAGTAATGGTGCAGCTCTGCCCAGCCTG...AGAGGTGGCCGGGAGCTTATGGGAGAAGTTAAGACAGAAAATCCGCTCCTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135588.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCCCTTCCCCCTGGCAGTaGTGTGCAAAGTCTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLEHSRSPHRGMARFPSPSPWQ*CAKSFW Trigger: CCAGAAAGACTTTGCACAGCACTGCCAGGGGGAAGG...GGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | TCGTCTCACAGGCTATTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGAGGATGGAGAAGAGCTaGTCGCAGATGTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHRLLGLEHSRSPHRGMRMEKS*SQMWVL Trigger: CAGCACCCACATCTGCGAGCAGCTCTTCTCCATCCT...CATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAATAGCCTGTGAGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCCTCTTCCAGAGGGAACAGGGACCATaGCTGTTGTCCCCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILGLHIEEWPDFLPFLFQREQGP*LLSPRL Trigger: AAGCCTTGGGGACAACAGCCATGGTCCCTGTTCCCT...CTGGAAGAGGAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TCGTCTCACAGGCTATTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGCCACCTTGTCGTACTTaGTCCTCAGCACCGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSHRLLGLEHSRSPHRGMPPCRT*SSAPCC Trigger: GCAACACGGTGCTGAGGACCAAGTACGACAAGGTGG...CATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAATAGCCTGTGAGACGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTGCTCAGCTTCAGGATaGAGAAGAGCTGCTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLEHSRSPHRGMARFPSCSASG*RRAARR Trigger: TCTGCGAGCAGCTCTTCTCCATCCTGAAGCTGAGCA...GGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCTTTCCTCTTCCAGCAACTTCTCTTTATTGAAATGGGGTATTGATAGGCTTCCGACTCCGTCTTaGTTAGCATGGCTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSSSNFSLLKWGIDRLPTPS*LAWLLP Trigger: GGGCAGCAGCCATGCTAATCAAGACGGAGTCGGAAG...CCTATCAATACCCCATTTCAATAAAGAGAAGTTGCTGGAAGAGGAAAGGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCTTTCCTCTTCCAGCAACTTCTCTTTATTGAAATGGGGTATTGATAGGAGGCAGAAATGGTCCTaGACGGCTCTCCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSSSNFSLLKWGIDRRQKWS*TALLSS Trigger: GCTGCTCAGGAGAGCCGTGCAGGACCATTTCTGCCT...CCTATCAATACCCCATTTCAATAAAGAGAAGTTGCTGGAAGAGGAAAGGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | TCGTCTCACAGGCTATTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGAGCGAAGGAGATCCCTaGTTTGTTCTCCAGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHRLLGLEHSRSPHRGMSEGDP*FVLQDP Trigger: TGGATCCTGGAGAACAAAGCAGGGATCTCCTTCGCT...CATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAATAGCCTGTGAGACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | ACCTCAAATTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCAGTAGTGGGATTGAAGGTCTTCAACACCTaGTGCAGAGTTTACAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSNSNSDPPALASAVVGLKVFNT*CRVYKV Trigger: AACCTTGTAAACTCTGCAGCAGGTGTTGAAGACCTT...CAATCCCACTACTGCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAATTTGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCCTCTTCCAGACTGCGCCTCTTTCTTaGTCAGCTTCAGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILGLHIEEWPDFLPFLFQTAPLS*SASGWR Trigger: TCTCCATCCTGAAGCTGAGCAAGAAAGAGGCGCAGT...CTGGAAGAGGAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TCGTCTCACAGGCTATTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGAGTGGCTCCTGTATTTaGGGTAACTGCTCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSHRLLGLEHSRSPHRGMSGSCI*GNCSTG Trigger: ACCTGTGGAGCAGTTACCCCAAATACAGGAGCCACT...CATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAATAGCCTGTGAGACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCCTCTTCCAGGAACTTGATGAAGTCTaGAGCATCCAGGATCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILGLHIEEWPDFLPFLFQELDEV*SIQDPP Trigger: AGGAGGATCCTGGATGCTGCAGACTTCATCAAGTTC...CTGGAAGAGGAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TCGTCTCACAGGCTATTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGTGTGCAAAGTCTTTCTaGAGATCCTGTCTGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHRLLGLEHSRSPHRGMCAKSF*RSCLAL Trigger: CAACGCCAGACAGGATCTCCAGAAAGACTTTGCACA...CATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAATAGCCTGTGAGACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCTTTCCTCTTCCAGCAACTTCTCTTTATTGAAATGGGGTATTGATAGGAAGGCTGTAATTGTCTaGGTGCTGGAAGGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSSSNFSLLKWGIDRKAVIV*VLEGQA Trigger: GGCCTGGCCTTCCAGCACCCAGACAATTACAGCCTT...CCTATCAATACCCCATTTCAATAAAGAGAAGTTGCTGGAAGAGGAAAGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCATGAAGATGGCCAGCTaGGTGGTGTCATTGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLEHSRSPHRGMARFPSMKMAS*VVSLIS Trigger: GGATATCAATGACACCACCCAGCTGGCCATCTTCAT...GGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| 3UTR CAA 72 bp | TTTCCTTCCATTTTTACCTCAGTCTCGGGGTCCTCATaGGTCTCTAAAGCGACCATCCGAGTAGACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPSIFTSVSGSS*VSKATIRVDSS Trigger: TGAAGAGTCTACTCGGATGGTCGCTTTAGAGACCAATGAGGACCCCGAGACTGAGGTAAAAATGGAAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| CDS-3UTR CCA 90 bp | CATCGATGGCGATGGAGTACGCCACAAAGGAGCGGATTTTCTGTCTTAACTTCTTTCAAGTCCAGGAAGTaGTCTAATGACCGTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: HRWRWSTPQRSGFSVLTSFKSRK*SNDREL Trigger: AAGTTCACGGTCATTAGACCACTTCCTGGACTTGAA...AGAAGTTAAGACAGAAAATCCGCTCCTTTGTGGCGTACTCCATCGCCATCGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135588.8 ENSMUST00000152587.2 |
||
| CDS-3UTR CCA 90 bp | TCGTCTCACAGGCTATTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGTTCAAGTCCAGGAAGTaGTCTAATGACCGTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSHRLLGLEHSRSPHRGMFKSRK*SNDREL Trigger: AAGTTCACGGTCATTAGACCACTTCCTGGACTTGAA...CATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAATAGCCTGTGAGACGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | ATGGAGTACGCCACAAAGGAGCGGATTTTCTGTCTTAACTTCTCCCATAAGCTCTTCAAGTCCAGGAAGTaGTCTAATGACCGTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: MEYATKERIFCLNFSHKLFKSRK*SNDREL Trigger: AAGTTCACGGTCATTAGACCACTTCCTGGACTTGAA...GAGCTTATGGGAGAAGTTAAGACAGAAAATCCGCTCCTTTGTGGCGTACTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135588.8 ENSMUST00000152587.2 |
||
| 3UTR CAA 72 bp | GGATTCTTGACCCCCACGCAGCTCTTGAAGTTTCCCTaGCCTGCATTCCACTTGTTATGTAAATATATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFLTPTQLLKFP*PAFHLLCKYML Trigger: AAGCATATATTTACATAACAAGTGGAATGCAGGCAAGGGAAACTTCAAGAGCTGCGTGGGGGTCAAGAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123941.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCCAGAGTTTACAAGGTTaGATGGACTTGCATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VWNILGLHIEEWPDFLPFQSLQG*MDLHFL Trigger: AAGGAAATGCAAGTCCATCCAACCTTGTAAACTCTG...GAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCTTTCCTCTTCCAGCAACTTCTCTTTATTGAAATGGGGTATTGATAGGACTTGCATTGGGGAATaGTTGCTCTGGACACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSSSNFSLLKWGIDRTCIGE*LLWTHD Trigger: ATCGTGTGTCCAGAGCAACCATTCCCCAATGCAAGT...CCTATCAATACCCCATTTCAATAAAGAGAAGTTGCTGGAAGAGGAAAGGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCTTTCCTCTTCCAGCAACTTCTCTTTATTGAAATGGGGTATTGATAGGGTTTACAAGGTTGGATaGACTTGCATTTCCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSSSNFSLLKWGIDRVYKVG*TCISFH Trigger: ATGGAAGGAAATGCAAGTCCATCCAACCTTGTAAAC...CCTATCAATACCCCATTTCAATAAAGAGAAGTTGCTGGAAGAGGAAAGGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | AGGTCGGCTCCCTTGCAACATGAGGCTGCCCTGGCTCTGAGCTTTGTCACCAGCCGCAGGTTGTACTCCTaGGACACCGACACGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: RSAPLQHEAALALSFVTSRRLYS*DTDTLI Trigger: AATGAGCGTGTCGGTGTCCAAGGAGTACAACCTGCG...GCTGGTGACAAAGCTCAGAGCCAGGGCAGCCTCATGTTGCAAGGGAGCCGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152587.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCCCAAGCTGACCTCAAATTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCCGCAGGTTGTACTCCTaGGACACCGACACGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAQADLKFKLRSSCLGLRRRLYS*DTDTLC Trigger: GCAGAGCGTGTCGGTGTCCAAGGAGTACAACCTGCG...GCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAATTTGAGGTCAGCTTGGGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS TCA 90 bp | CCAGATGCGTCTCCCAGAGGCACAGTTTCGCTAGGAAGGCCCGGATaGAGTCATACATCTGGGTCACGATCTGTGAATGGCCTTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PDASPRGTVSLGRPG*SHTSGSRSVNGLGG Trigger: CCCTCCAAGGCCATTCACAGATCGTGACCCAGATGTATGACTTCATCCGGGCCTTCCTAGCGAAACTGTGCCTCTGGGAGACGCATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS CCA 90 bp | TCCACTAGGAAGGCCAGGTCCAGGATCCAGTCCCGAGAACTGAGCTaGGGCACAGGTTTGCCCCGGGAAGACATAAACGAGTCTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STRKARSRIQSRELS*GTGLPREDINESIS Trigger: GGAAATAGACTCGTTTATGTCTTCCCGGGGCAAACCTGTGCCCCAGCTCAGTTCTCGGGACTGGATCCTGGACCTGGCCTTCCTAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS TCA 90 bp | TCAGCTTCAGGATGGAGAAGAGCTGCTCGCAGATGTGGGTGCTGCTaGACATGGACAGCATCCTGGCACAGTGGCTCCTGTATTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SASGWRRAARRCGCC*TWTASWHSGSCIWG Trigger: ACCCCAAATACAGGAGCCACTGTGCCAGGATGCTGTCCATGTTCAGCAGCACCCACATCTGCGAGCAGCTCTTCTCCATCCTGAAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS CCA 90 bp | TCTTTCTTGCTCAGCTTCAGGATGGAGAAGAGCTGCTCGCAGATGTaGGTGCTGCTGAACATGGACAGCATCCTGGCACAGTGGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFLLSFRMEKSCSQM*VLLNMDSILAQWLL Trigger: CAGGAGCCACTGTGCCAGGATGCTGTCCATGTTCAGCAGCACCCACATCTGCGAGCAGCTCTTCTCCATCCTGAAGCTGAGCAAGAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS CCA 90 bp | GCCCGGATGAAGTCATACATCTGGGTCACGATCTGTGAATGGCCTTaGAGGGAGGCATCCAGTGTATTGAGGTGCGTCGTCATGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ARMKSYIWVTICEWP*REASSVLRCVVMST Trigger: AGTGGACATGACGACGCACCTCAATACACTGGATGCCTCCCTCCAAGGCCATTCACAGATCGTGACCCAGATGTATGACTTCATCCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS CCA 90 bp | AGGAAGGCCCGGATGAAGTCATACATCTGGGTCACGATCTGTGAATaGCCTTGGAGGGAGGCATCCAGTGTATTGAGGTGCGTCGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RKARMKSYIWVTICE*PWREASSVLRCVVM Trigger: CATGACGACGCACCTCAATACACTGGATGCCTCCCTCCAAGGCCATTCACAGATCGTGACCCAGATGTATGACTTCATCCGGGCCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | TTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCCCTCGGCCCAGCCATTaGAGGGCCGTGTGGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGLEHSRSPHRGMARFPSPRPSH*RAVWYS Trigger: ACTGTACCACACGGCCCTCAAATGGCTGGGCCGAGG...GGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | TTCAAACTCAGATCCTCCTGCCTTGGCCTCCGCAGTAGTGGGATTGAAGGCTCCCTAATGACCGTGAACTaGATGAAGTCTGCAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FKLRSSCLGLRSSGIEGSLMTVN*MKSAAS Trigger: GGATGCTGCAGACTTCATCAAGTTCACGGTCATTAG...GGAGCCTTCAATCCCACTACTGCGGAGGCCAAGGCAGGAGGATCTGAGTTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCTTGAGGTCGGCTCCCTaGCAACATGAGGCTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VWNILGLHIEEWPDFLPFLRSAP*QHEAAL Trigger: CAGGGCAGCCTCATGTTGCAAGGGAGCCGACCTCAA...GAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCAGCTGGGGCACAGGTTaGCCCCGGGAAGACATAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VWNILGLHIEEWPDFLPFSWGTG*PREDIN Trigger: GTTTATGTCTTCCCGGGGCAAACCTGTGCCCCAGCT...GAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | TTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCACCTCGGCCTTGGACTaGGCCAGCTCTTTACACATG | + |
|
Preference number: 5 (lower is better) Translates to: LGLEHSRSPHRGMARFPSTSALD*ASSLHM Trigger: CATGTGTAAAGAGCTGGCCAAGTCCAAGGCCGAGGT...GGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGGAACATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCGCATGGCTGCTGCCCTaGGTGAAGTGCCAGAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VWNILGLHIEEWPDFLPFAWLLP*VKCQNL Trigger: AAGATTCTGGCACTTCACCAAGGGCAGCAGCCATGC...GAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | TCGTCTCACAGGCTATTAGGTCTGGAACATTCTAGGTCTCCACATAGAGGAATGTGCATTGGGGAATGGTaGCTCTGGACACACGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSHRLLGLEHSRSPHRGMCIGEW*LWTHDL Trigger: GAGATCGTGTGTCCAGAGCAACCATTCCCCAATGCA...CATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAATAGCCTGTGAGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCCTCTTCCAGAAGGAGATCCCTGCTTaGTTCTCCAGGATCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILGLHIEEWPDFLPFLFQKEIPA*FSRIHF Trigger: GAAGTGGATCCTGGAGAACAAAGCAGGGATCTCCTT...CTGGAAGAGGAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGGTCTCCACATAGAGGAATGGCCAGATTTCCTTCCTTTCCTCTTCCAGCAAGGTTGGATGGACTaGCATTTCCTTCCATTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ILGLHIEEWPDFLPFLFQQGWMD*HFLPFL Trigger: TAAAAATGGAAGGAAATGCAAGTCCATCCAACCTTG...CTGGAAGAGGAAAGGAAGGAAATCTGGCCATTCCTCTATGTGGAGACCTAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS GCA 72 bp | CCACCTGGAGTGCTGCGCCCCACTGCGCCTCTTTCTTaGTCAGCTTCAGGATGGAGAAGAGCTGCTCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PPGVLRPTAPLS*SASGWRRAARR Trigger: TCTGCGAGCAGCTCTTCTCCATCCTGAAGCTGAGCAAGAAAGAGGCGCAGTGGGGCGCAGCACTCCAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS CCA 72 bp | AGCACCGTGTTGCACTGCAGGTCGATCACCTCCATCTaGAGCTCCTCGCGCACGCTGTCGATCGTGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: STVLHCRSITSI*SSSRTLSIVVE Trigger: TTCCACCACGATCGACAGCGTGCGCGAGGAGCTCCAGATGGAGGTGATCGACCTGCAGTGCAACACGGTGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
||
| CDS CCA 72 bp | CCGATTTCAGCGTGGGGAAGTGGGCCAGGTTGTTCCTaGCCAGATGCGTCTCCCAGAGGCACAGTTTCGCTA | + |
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Preference number: 6 (lower is better) Translates to: PISAWGSGPGCS*PDASPRGTVSL Trigger: TAGCGAAACTGTGCCTCTGGGAGACGCATCTGGCCAGGAACAACCTGGCCCACTTCCCCACGCTGAAATCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| CDS TCA 72 bp | GGATGGAGAAGAGCTGCTCGCAGATGTGGGTGCTGCTaGACATGGACAGCATCCTGGCACAGTGGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GWRRAARRCGCC*TWTASWHSGSC Trigger: ACAGGAGCCACTGTGCCAGGATGCTGTCCATGTTCAGCAGCACCCACATCTGCGAGCAGCTCTTCTCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| CDS CCA 72 bp | GCTTGTAGAAGTCCGGGACGCCCACCTTGTCGTACTTaGTCCTCAGCACCGTGTTGCACTGCAGGTCGATCA | + |
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Preference number: 6 (lower is better) Translates to: ACRSPGRPPCRT*SSAPCCTAGRS Trigger: TGATCGACCTGCAGTGCAACACGGTGCTGAGGACCAAGTACGACAAGGTGGGCGTCCCGGACTTCTACAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| CDS CCA 72 bp | TCGCTCTCACACGACTTGAAATCCGACAGGCGCCTCTaGAACTCGGCCTTCAGCTCCACGATCTTAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: SLSHDLKSDRRL*NSAFSSTILGM Trigger: CATCCCTAAGATCGTGGAGCTGAAGGCCGAGTTCCAGAGGCGCCTGTCGGATTTCAAGTCGTGTGAGAGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| CDS CCA 72 bp | CTCAGCTTCAGGATGGAGAAGAGCTGCTCGCAGATGTaGGTGCTGCTGAACATGGACAGCATCCTGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: LSFRMEKSCSQM*VLLNMDSILAQ Trigger: CTGTGCCAGGATGCTGTCCATGTTCAGCAGCACCCACATCTGCGAGCAGCTCTTCTCCATCCTGAAGCTGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| CDS CCA 72 bp | ATCCAGTTCACCGAGTCTACCACCACGTCCATGACGTaGCCCATTCTTAACTTCTGGGCGCACAGCCACTCT | + |
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Preference number: 6 (lower is better) Translates to: IQFTESTTTSMT*PILNFWAHSHS Trigger: AGAGTGGCTGTGCGCCCAGAAGTTAAGAATGGGCCACGTCATGGACGTGGTGGTAGACTCGGTGAACTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| CDS CAA 72 bp | AGGATCCAGTCCCGAGAACTGAGCTGGGGCACAGGTTaGCCCCGGGAAGACATAAACGAGTCTATTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RIQSRELSWGTG*PREDINESISS Trigger: GGAGGAAATAGACTCGTTTATGTCTTCCCGGGGCAAACCTGTGCCCCAGCTCAGTTCTCGGGACTGGATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| CDS TCA 72 bp | TCTCCCAGAGGCACAGTTTCGCTAGGAAGGCCCGGATaGAGTCATACATCTGGGTCACGATCTGTGAATGGC | + |
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Preference number: 6 (lower is better) Translates to: SPRGTVSLGRPG*SHTSGSRSVNG Trigger: GCCATTCACAGATCGTGACCCAGATGTATGACTTCATCCGGGCCTTCCTAGCGAAACTGTGCCTCTGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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| CDS CCA 72 bp | CGGATGAAGTCATACATCTGGGTCACGATCTGTGAATaGCCTTGGAGGGAGGCATCCAGTGTATTGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: RMKSYIWVTICE*PWREASSVLRC Trigger: GCACCTCAATACACTGGATGCCTCCCTCCAAGGCCATTCACAGATCGTGACCCAGATGTATGACTTCATCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016086.10 |
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