RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTF2I (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060261

Ensembl transcript IDs: ENSMUST00000059042.15, ENSMUST00000082057.10, ENSMUST00000111261.12, ENSMUST00000172715.8, ENSMUST00000173341.9, ENSMUST00000173485.8, ENSMUST00000173888.8, ENSMUST00000174133.5, ENSMUST00000174155.8, ENSMUST00000174354.8, ENSMUST00000174513.8, ENSMUST00000174772.8

Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATaGACTGGCTGCTCACTGGCGGTCAGGCGAGCTGGCCGGCTTTGC +
Preference number: 1 (lower is better)
Translates to: RSEALRLASPAALHG*TGCSLAVRRAGRLC
Trigger: GCAAAGCCGGCCAGCTCGCCTGACCGCCAGTGAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR GCA 90 bp GCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTaGTCACTGGCGGTCAGGCGAGCTGGCCGGCTTTGCTCTGAATGG +
Preference number: 1 (lower is better)
Translates to: ALRLASPAALHGCTG*SLAVRRAGRLCSEW
Trigger: CCATTCAGAGCAAAGCCGGCCAGCTCGCCTGACCGCCAGTGAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR CCA 90 bp ACACCAATGTCCTCACTCCCCACCCTGGCGCAGAGGCCAGACAGGTaGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGAC +
Preference number: 1 (lower is better)
Translates to: TPMSSLPTLAQRPDR*LETNQPGRHTAQPD
Trigger: GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGGCCTCTGCGCCAGGGTGGGGAGTGAGGACATTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR GCA 90 bp CCCATTGTGAACATTGTGGTGACTACCGAGAACCGTGCCCTCACGTaGCTAACTGCTGAGAGCTGTTACCTTATCATCGTCTGTGAGCCC +
Preference number: 1 (lower is better)
Translates to: PIVNIVVTTENRALT*LTAESCYLIIVCEP
Trigger: GGGCTCACAGACGATGATAAGGTAACAGCTCTCAGCAGTTAGGCACGTGAGGGCACGGTTCTCGGTAGTCACCACAATGTTCACAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR CCA 90 bp GGTTTGTATAGAAGGTATTTCTGTTATACAAGTATATTACAGAGCTaGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCACGCTGGA +
Preference number: 1 (lower is better)
Translates to: GLYRRYFCYTSILQS*QERVPKLFSTTHAG
Trigger: TCCAGCGTGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAACAGAAATACCTTCTATACAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR CCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCACAGCAGCCCTCCCCTaGCAGGAGGGGCAGCCGAGT +
Preference number: 2 (lower is better)
Translates to: SEALRLASPAALHGCTGCTAALP*QEGQPS
Trigger: ACTCGGCTGCCCCTCCTGCCAGGGGAGGGCTGCTGT...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR CCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCACAGCAGCCCTCCCCTaGCAGGAGGGGCAGCCGAGT +
Preference number: 2 (lower is better)
Translates to: RGSEASLSSCTARMHWLLTAALP*QEGQPS
Trigger: ACTCGGCTGCCCCTCCTGCCAGGGGAGGGCTGCTGT...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR CCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACCCCCTGAGGCCACTGTaGGTCCCAGTTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDPLRPL*VPVGEG
Trigger: CCCCTCCCCAACTGGGACCCACAGTGGCCTCAGGGG...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTGGCCGGCTTTGCTCTaGATGGCAGTGAGGACAAAG +
Preference number: 2 (lower is better)
Translates to: SEALRLASPAALHGCTGCWPALL*MAVRTK
Trigger: CTTTGTCCTCACTGCCATTCAGAGCAAAGCCGGCCA...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCTGGCCGGCTTTGCTCTaGATGGCAGTGAGGACAAAG +
Preference number: 2 (lower is better)
Translates to: RGSEASLSSCTARMHWLLWPALL*MAVRTK
Trigger: CTTTGTCCTCACTGCCATTCAGAGCAAAGCCGGCCA...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR GCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCACAGCCCAAGGCTCTaGCCGATGCATAAGAAACCC +
Preference number: 2 (lower is better)
Translates to: ERGSEASLSSCTARMHWLHSPRL*PMHKKP
Trigger: GGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTG...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR GCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCCACAGCCCAAGGCTCTaGCCGATGCATAAGAAACCC +
Preference number: 2 (lower is better)
Translates to: SEALRLASPAALHGCTGCHSPRL*PMHKKP
Trigger: GGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTG...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR TCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGAGGACAAAGGAATCGTaGTGGAGCTTGGGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: ERGSEASLSSCTARMHWLRTKES*WSLGRG
Trigger: GCCTCTTCCCAAGCTCCATCACGATTCCTTTGTCCT...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR GCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCCAAGGCTCTGCCCGATaGATAAGAAACCCTACGAGT +
Preference number: 2 (lower is better)
Translates to: RGSEASLSSCTARMHWLLQGSAR*IRNPTS
Trigger: ACTCGTAGGGTTTCTTATGCATCGGGCAGAGCCTTG...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCTGCTCTGAATGGCAGTaGGGACAAAGGAATCGTGAT +
Preference number: 2 (lower is better)
Translates to: RGSEASLSSCTARMHWLLCSEWQ*GQRNRD
Trigger: ATCACGATTCCTTTGTCCTCACTGCCATTCAGAGCA...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR CCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACACTGTGGGTCCCAGTTaGGGAGGGGCAAATCCTCCA +
Preference number: 2 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDTVGPS*GGANPP
Trigger: TGGAGGATTTGCCCCTCCCCAACTGGGACCCACAGT...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR TCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACAGGACAAAGGAATCGTaGTGGAGCTTGGGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDRTKES*WSLGRG
Trigger: GCCTCTTCCCAAGCTCCATCACGATTCCTTTGTCCT...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR GCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACCAAGGCTCTGCCCGATaGATAAGAAACCCTACGAGT +
Preference number: 2 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDQGSAR*IRNPTS
Trigger: ACTCGTAGGGTTTCTTATGCATCGGGCAGAGCCTTG...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR CCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCGCAAGACCACGGAACTaGTCTTCAATAGAAAAACTA +
Preference number: 2 (lower is better)
Translates to: SEALRLASPAALHGCTGCARPRN*SSIEKL
Trigger: TAGTTTTTCTATTGAAGACCAGTTCCGTGGTCTTGC...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR GCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCCAAGGCTCTGCCCGATaGATAAGAAACCCTACGAGT +
Preference number: 2 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPQGSAR*IRNPTS
Trigger: ACTCGTAGGGTTTCTTATGCATCGGGCAGAGCCTTG...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR-3UTR GCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACACCCAGAAATCTACTTaGTGTAAAGTAACCGGAGCG +
Preference number: 2 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDTQKST*CKVTGA
Trigger: CGCTCCGGTTACTTTACAGCAAGTAGATTTCTGGGT...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR CCA 72 bp GAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTaGCTGCTCACTGGCGGTCAGGCGAGCTGGCCGGCT +
Preference number: 3 (lower is better)
Translates to: EASLSSCTARMH*LLTGGQASWPA
Trigger: AGCCGGCCAGCTCGCCTGACCGCCAGTGAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR GCA 72 bp GCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATaGACTGGCTGCTCACTGGCGGTCAGGCGAGCTGGC +
Preference number: 3 (lower is better)
Translates to: ALRLASPAALHG*TGCSLAVRRAG
Trigger: GCCAGCTCGCCTGACCGCCAGTGAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR CCA 72 bp TCCTCACTCCCCACCCTGGCGCAGAGGCCAGACAGGTaGTTAGAGACTAACCAACCAGGCAGACACACAGCC +
Preference number: 3 (lower is better)
Translates to: SSLPTLAQRPDR*LETNQPGRHTA
Trigger: GGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGGCCTCTGCGCCAGGGTGGGGAGTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR TCA 72 bp CTGCGGAAGCCAAGATGCCCTGTAGGAATATCTCACTaGCGGGAACACGCACCACAGCCCAAGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: LRKPRCPVGISH*REHAPQPKALP
Trigger: GGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTTGGCTTCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR GCA 72 bp CTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTaGCCGATGCATAAGAAACCCTACGAGTCGTCCCTG +
Preference number: 3 (lower is better)
Translates to: LTDGNTHHSPRL*PMHKKPYESSL
Trigger: CAGGGACGACTCGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR TCA 72 bp GTCAGGCGAGCTGGCCGGCTTTGCTCTGAATGGCAGTaGGGACAAAGGAATCGTGATGGAGCTTGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: VRRAGRLCSEWQ*GQRNRDGAWEE
Trigger: CTCTTCCCAAGCTCCATCACGATTCCTTTGTCCTCACTGCCATTCAGAGCAAAGCCGGCCAGCTCGCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR TCA 72 bp AGGGGCAAATCCTCCACCTGCTCAAGCATGCAGACCTaGCCTCTGACCTTTAGGACACACCCAGAAATCTAC +
Preference number: 3 (lower is better)
Translates to: RGKSSTCSSMQT*PLTFRTHPEIY
Trigger: GTAGATTTCTGGGTGTGTCCTAAAGGTCAGAGGTCAGGTCTGCATGCTTGAGCAGGTGGAGGATTTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR TCA 72 bp AATCCTCCACCTGCTCAAGCATGCAGACCTGACCTCTaGCCTTTAGGACACACCCAGAAATCTACTTGCTGT +
Preference number: 3 (lower is better)
Translates to: NPPPAQACRPDL*PLGHTQKSTCC
Trigger: ACAGCAAGTAGATTTCTGGGTGTGTCCTAAAGGTCAGAGGTCAGGTCTGCATGCTTGAGCAGGTGGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
3UTR CCA 72 bp AGAAGGTATTTCTGTTATACAAGTATATTACAGAGCTaGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACG +
Preference number: 3 (lower is better)
Translates to: RRYFCYTSILQS*QERVPKLFSTT
Trigger: CGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAACAGAAATACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCCCCTCACTTTGCGCTTaGCAGCGTTGGCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCPSLCA*QRWRAP
Trigger: CGGAGCCCGCCAACGCTGGCAAGCGCAAAGTGAGGG...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCCGAACCGCAGAGGTCTaGGGACTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFRTAEV*GLLLLG
Trigger: CCCCAACAACAGCAGTCCTCAGACCTCTGCGGTTCG...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCCCTTCACAGCCTCTGTaGGGCCCAGAGCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLPSQPL*GPEPEQ
Trigger: TTGCTCAGGCTCTGGGCCTCACAGAGGCTGTGAAGG...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCCGAACCGCAGAGGTCTaGGGACTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCRTAEV*GLLLLG
Trigger: CCCCAACAACAGCAGTCCTCAGACCTCTGCGGTTCG...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCCCTCACTTTGCGCTTaGCAGCGTTGGCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCPSLCA*QRWRAP
Trigger: CGGAGCCCGCCAACGCTGGCAAGCGCAAAGTGAGGG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACCCCTCACTTTGCGCTTaGCAGCGTTGGCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDPSLCA*QRWRAP
Trigger: CGGAGCCCGCCAACGCTGGCAAGCGCAAAGTGAGGG...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCTCCAGCCTGGGAATaGCAAATGTGGACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCSPAWE*QMWTAF
Trigger: GAAGGCCGTCCACATTTGGCATTCCCAGGCTGGAGA...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGTCTCCAGCCTGGGAATaGCAAATGTGGACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLSPAWE*QMWTAF
Trigger: GAAGGCCGTCCACATTTGGCATTCCCAGGCTGGAGA...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCGTAATCAGGGTCTTCTaGCTCCTCCTTCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFVIRVF*LLLHCH
Trigger: GTGACAGTGAAGGAGGAGTCAGAAGACCCTGATTAC...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACCGAACCGCAGAGGTCTaGGGACTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYRTAEV*GLLLLG
Trigger: CCCCAACAACAGCAGTCCTCAGACCTCTGCGGTTCG...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCGAACCGCAGAGGTCTaGGGACTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCRTAEV*GLLLLG
Trigger: CCCCAACAACAGCAGTCCTCAGACCTCTGCGGTTCG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCTCTCATACACAGCAATaGAGGCCACCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLSHTQQ*RPPQPW
Trigger: CCAAGGCTGAGGTGGCCTGCATTGCTGTGTATGAGA...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGTCTCATACACAGCAATaGAGGCCACCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLSHTQQ*RPPQPW
Trigger: CCAAGGCTGAGGTGGCCTGCATTGCTGTGTATGAGA...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCCCCTCACTTTGCGCTTaGCAGCGTTGGCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGPSLCA*QRWRAP
Trigger: CGGAGCCCGCCAACGCTGGCAAGCGCAAAGTGAGGG...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCGTTCAGTTTTCACTTTaGTGGGGCCACAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFVQFSL*WGHNFH
Trigger: GTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAAC...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCGTAATCAGGGTCTTCTaGCTCCTCCTTCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCVIRVF*LLLHCH
Trigger: GTGACAGTGAAGGAGGAGTCAGAAGACCCTGATTAC...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGCCTTCACAGCCTCTGTaGGGCCCAGAGCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKPSQPL*GPEPEQ
Trigger: TTGCTCAGGCTCTGGGCCTCACAGAGGCTGTGAAGG...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCCTCTCCCTCGAGGCTTaGAGGGAACATTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCLSLEA*REHLNH
Trigger: ATGGTTCAAATGTTCCCTTCAAGCCTCGAGGGAGAG...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCCCCCGCACTTTTCATTaGAGAGGTTCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFPRTFH*RGSPLS
Trigger: AGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGG...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCCCTCGGCAAATTTCTTaGAGAAGAGCTGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFPRQIS*RRAGQP
Trigger: TGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGG...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCGCACAGGGACCACTGTaGATTTGCCTAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCAQGPL*ICLKLS
Trigger: GGAAAGCTTTAGGCAAATCCACAGTGGTCCCTGTGC...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGGCACAGGGACCACTGTaGATTTGCCTAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLAQGPL*ICLKLS
Trigger: GGAAAGCTTTAGGCAAATCCACAGTGGTCCCTGTGC...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCTGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFWCVCP*LSHFSC
Trigger: ACAACTGAAGTGACTCAGCCACGGACAAACACACCA...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCCCAATCTTCTTTGACTaGTGTGTTTGTCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFPIFFD*CVCPWL
Trigger: CAGCCACGGACAAACACACCAGTCAAAGAAGATTGG...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCCACATAGAAGTCTTCTaGGAAGGACTCGAACAACGC +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFHIEVF*EGLEQR
Trigger: GCGTTGTTCGAGTCCTTCCCAGAAGACTTCTATGTG...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGGTCATCATCTTCTGCTaGCACTTCCACTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLVIIFC*HFHFRS
Trigger: GGAACGGAAGTGGAAGTGCCAGCAGAAGATGATGAC...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082057.10
ENSMUST00000173341.9
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGGTTCAGTTTTCACTTTaGTGGGGCCACAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLVQFSL*WGHNFH
Trigger: GTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAAC...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCTCTGAAGGGACATGTTaGGTAGAATCTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLSEGTC*VESSAG
Trigger: GCCAGCAGAAGATTCTACTCAACATGTCCCTTCAGA...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCGTCCTCACTGGTTTCTaGAGGGACATGTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLVLTGF*RDMLSR
Trigger: TCTACTCAACATGTCCCTTCAGAAACCAGTGAGGAC...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCGTCCTCACTGGTTTCTaGAGGGACATGTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCVLTGF*RDMLSR
Trigger: TCTACTCAACATGTCCCTTCAGAAACCAGTGAGGAC...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR TCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCCATTCCAATCTTCTTTaGCTGGTGTGTTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFHSNLL*LVCLSV
Trigger: CACGGACAAACACACCAGTCAAAGAAGATTGGAATG...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTCCTTCACAGCCTCTGTaGGGCCCAGAGCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSPSQPL*GPEPEQ
Trigger: TTGCTCAGGCTCTGGGCCTCACAGAGGCTGTGAAGG...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTCGAACCGCAGAGGTCTaGGGACTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSRTAEV*GLLLLG
Trigger: CCCCAACAACAGCAGTCCTCAGACCTCTGCGGTTCG...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCCCCCGCACTTTTCATTaGAGAGGTTCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLPRTFH*RGSPLS
Trigger: AGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGG...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCCCCCGCACTTTTCATTaGAGAGGTTCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCPRTFH*RGSPLS
Trigger: AGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGG...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGGTCTGGCTCCTGCTTaGTCTGTGAACTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYGLAPA*SVNSHL
Trigger: CAGATGGGAGTTCACAGATCAAGCAGGAGCCAGACC...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCGGTCTGGCTCCTGCTTaGTCTGTGAACTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCGLAPA*SVNSHL
Trigger: CAGATGGGAGTTCACAGATCAAGCAGGAGCCAGACC...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCGGACCACTGTGGATTTaGCTAAAGCTTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCGPLWI*LKLSHS
Trigger: GCTATGGGAAAGCTTTAGGCAAATCCACAGTGGTCC...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGGGACCACTGTGGATTTaGCTAAAGCTTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLGPLWI*LKLSHS
Trigger: GCTATGGGAAAGCTTTAGGCAAATCCACAGTGGTCC...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCGGACCACTGTGGATTTaGCTAAAGCTTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLGPLWI*LKLSHS
Trigger: GCTATGGGAAAGCTTTAGGCAAATCCACAGTGGTCC...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCCCTCGGCAAATTTCTTaGAGAAGAGCTGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCPRQIS*RRAGQP
Trigger: TGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGG...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCTCTCCAGCCTGGGAATaGCAAATGTGGACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCSPAWE*QMWTAF
Trigger: GAAGGCCGTCCACATTTGGCATTCCCAGGCTGGAGA...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGTCTCCAGCCTGGGAATaGCAAATGTGGACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTSPAWE*QMWTAF
Trigger: GAAGGCCGTCCACATTTGGCATTCCCAGGCTGGAGA...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACTCTCCAGCCTGGGAATaGCAAATGTGGACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYSPAWE*QMWTAF
Trigger: GAAGGCCGTCCACATTTGGCATTCCCAGGCTGGAGA...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCCTCATCCGATTGGCCTaGGTGGTAGATTTCATCTTA +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFLIRLA*VVDFIL
Trigger: TAAGATGAAATCTACCACCCAGGCCAATCGGATGAG...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCAGTAGAATCTTCTGCTaGCACTTCCACTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCSRIFC*HFHFRS
Trigger: GGAACGGAAGTGGAAGTGCCAGCAGAAGATTCTACT...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR CCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGTGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLWCVCP*LSHFSC
Trigger: ACAACTGAAGTGACTCAGCCACGGACAAACACACCA...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCTGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLWCVCP*LSHFSC
Trigger: ACAACTGAAGTGACTCAGCCACGGACAAACACACCA...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCWCVCP*LSHFSC
Trigger: ACAACTGAAGTGACTCAGCCACGGACAAACACACCA...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGTTTGAACCATTGGTCTaGGTAGGAGTTCGAACCGCA +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLFEPLV*VGVRTA
Trigger: TGCGGTTCGAACTCCTACCCAGACCAATGGTTCAAA...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCCATTTCTCAAAGTTaGACTCCCTCACTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCSISQS*TPSLCA
Trigger: AGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGA...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCTCCATTTCTCAAAGTTaGACTCCCTCACTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLSISQS*TPSLCA
Trigger: AGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGA...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCATTCCAATCTTCTTTaGCTGGTGTGTTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLHSNLL*LVCLSV
Trigger: CACGGACAAACACACCAGTCAAAGAAGATTGGAATG...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCCCTTCAGACTCGTTCTaGTCAACCAGCTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCPSDSF*STSWLL
Trigger: TAATAACCAGCTGGTTGATCAGAACGAGTCTGAAGG...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCCCTTCAGACTCGTTCTaGTCAACCAGCTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLPSDSF*STSWLL
Trigger: TAATAACCAGCTGGTTGATCAGAACGAGTCTGAAGG...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACGGTCTGGCTCCTGCTTaGTCTGTGAACTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDGLAPA*SVNSHL
Trigger: CAGATGGGAGTTCACAGATCAAGCAGGAGCCAGACC...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCAGGTTCTCCACTTTCTaGTTCAGGTCTGTGATCTTA +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFRFSTF*FRSVIL
Trigger: TAAGATCACAGACCTGAAGCAGAAAGTGGAGAACCT...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGTCTCCAGCCTGGGAATaGCAAATGTGGACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKSPAWE*QMWTAF
Trigger: GAAGGCCGTCCACATTTGGCATTCCCAGGCTGGAGA...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCCTCATCCGATTGGCCTaGGTGGTAGATTTCATCTTA +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCLIRLA*VVDFIL
Trigger: TAAGATGAAATCTACCACCCAGGCCAATCGGATGAG...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCAATCTTTTCTGGTATTaGCAAAAGCACGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFNLFWY*QKHALF
Trigger: AAAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATT...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCCCTCCACCGTTTTTCTaGGTGTTTCAATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLPPPFF*VFQFLQ
Trigger: CTGTAGAAATTGAAACACTCAGAAAAACGGTGGAGG...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCTTGGCTTTGATGGCTTaGGCATATTTTCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFLALMA*AYFLSN
Trigger: GTTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAA...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGCTCTCCCTCGAGGCTTaGAGGGAACATTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTLSLEA*REHLNH
Trigger: ATGGTTCAAATGTTCCCTTCAAGCCTCGAGGGAGAG...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCTCTCCCTCGAGGCTTaGAGGGAACATTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCLSLEA*REHLNH
Trigger: ATGGTTCAAATGTTCCCTTCAAGCCTCGAGGGAGAG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACCTCTCCCTCGAGGCTTaGAGGGAACATTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYLSLEA*REHLNH
Trigger: ATGGTTCAAATGTTCCCTTCAAGCCTCGAGGGAGAG...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGGTCTGGCTCCTGCTTaGTCTGTGAACTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSGLAPA*SVNSHL
Trigger: CAGATGGGAGTTCACAGATCAAGCAGGAGCCAGACC...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCGGTCTGGCTCCTGCTTaGTCTGTGAACTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPGLAPA*SVNSHL
Trigger: CAGATGGGAGTTCACAGATCAAGCAGGAGCCAGACC...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGGTAGATTTCATCTTATaGATCTCGGCGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLVDFIL*ISAAFS
Trigger: AGAAAAGGCCGCCGAGATGCATAAGATGAAATCTAC...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCGTAGATTTCATCTTATaGATCTCGGCGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLVDFIL*ISAAFS
Trigger: AGAAAAGGCCGCCGAGATGCATAAGATGAAATCTAC...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCCCATTTCCAGAGAAATaGCAGAATCTTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCPFPEK*QNLLWV
Trigger: AACCCACAGAAGATTCTGGCATTTCTCTGGAAATGG...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTTCTCCAGCCTGGGAATaGCAAATGTGGACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSSPAWE*QMWTAF
Trigger: GAAGGCCGTCCACATTTGGCATTCCCAGGCTGGAGA...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCGCACAGGGACCACTGTaGATTTGCCTAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCAQGPL*ICLKLS
Trigger: GGAAAGCTTTAGGCAAATCCACAGTGGTCCCTGTGC...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACCTTCGGGGTCCTCACTaGTTTCTGAAGGGACATGTT +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYLRGPH*FLKGHV
Trigger: AACATGTCCCTTCAGAAACCAGTGAGGACCCCGAAG...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR CCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCTTCGGGGTCCTCACTaGTTTCTGAAGGGACATGTT +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCLRGPH*FLKGHV
Trigger: AACATGTCCCTTCAGAAACCAGTGAGGACCCCGAAG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR CCA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCGTGAGTGAGCAGCTCTaGTCTCTTGATAACAAATTT +
Preference number: 4 (lower is better)
Translates to: SPPLAGGAAECKTTELVFVSEQL*SLDNKF
Trigger: AAATTTGTTATCAAGAGACCAGAGCTGCTCACTCAC...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCAATCTTTTCTGGTATTaGCAAAAGCACGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCNLFWY*QKHALF
Trigger: AAAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATT...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCAATCTTTTCTGGTATTaGCAAAAGCACGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RGSEASLSSCTARMHWLLNLFWY*QKHALF
Trigger: AAAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATT...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGGTTCAGTTTTCACTTTaGTGGGGCCACAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTVQFSL*WGHNFH
Trigger: GTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAAC...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACGTAATCAGGGTCTTCTaGCTCCTCCTTCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDVIRVF*LLLHCH
Trigger: GTGACAGTGAAGGAGGAGTCAGAAGACCCTGATTAC...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCTCTGAAGGGACATGTTaGGTAGAATCTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCSEGTC*VESSAG
Trigger: GCCAGCAGAAGATTCTACTCAACATGTCCCTTCAGA...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR TCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGTCCTCACTGGTTTCTaGAGGGACATGTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYVLTGF*RDMLSR
Trigger: TCTACTCAACATGTCCCTTCAGAAACCAGTGAGGAC...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR TCA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTTGGCTTTGATGGCTTaGGCATATTTTCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: SEALRLASPAALHGCTGCLALMA*AYFLSN
Trigger: GTTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAA...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGTTGGCTTTGATGGCTTaGGCATATTTTCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLLALMA*AYFLSN
Trigger: GTTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAA...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACCCCCGCACTTTTCATTaGAGAGGTTCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYPRTFH*RGSPLS
Trigger: AGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGG...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCTCTCATACACAGCAATaGAGGCCACCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPSHTQQ*RPPQPW
Trigger: CCAAGGCTGAGGTGGCCTGCATTGCTGTGTATGAGA...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTCATACACAGCAATaGAGGCCACCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGSHTQQ*RPPQPW
Trigger: CCAAGGCTGAGGTGGCCTGCATTGCTGTGTATGAGA...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGGGACCACTGTGGATTTaGCTAAAGCTTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTGPLWI*LKLSHS
Trigger: GCTATGGGAAAGCTTTAGGCAAATCCACAGTGGTCC...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCCTCGGCAAATTTCTTaGAGAAGAGCTGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCPRQIS*RRAGQP
Trigger: TGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGGCACAGGGACCACTGTaGATTTGCCTAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKAQGPL*ICLKLS
Trigger: GGAAAGCTTTAGGCAAATCCACAGTGGTCCCTGTGC...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACGCACAGGGACCACTGTaGATTTGCCTAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDAQGPL*ICLKLS
Trigger: GGAAAGCTTTAGGCAAATCCACAGTGGTCCCTGTGC...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACAGTAGAATCTTCTGCTaGCACTTCCACTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYSRIFC*HFHFRS
Trigger: GGAACGGAAGTGGAAGTGCCAGCAGAAGATTCTACT...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR CCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCAGTAGAATCTTCTGCTaGCACTTCCACTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCSRIFC*HFHFRS
Trigger: GGAACGGAAGTGGAAGTGCCAGCAGAAGATTCTACT...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR CCA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGGTGAGTGAGCAGCTCTaGTCTCTTGATAACAAATTT +
Preference number: 4 (lower is better)
Translates to: ERGSEASLSSCTARMHWLVSEQL*SLDNKF
Trigger: AAATTTGTTATCAAGAGACCAGAGCTGCTCACTCAC...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCTGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCWCVCP*LSHFSC
Trigger: ACAACTGAAGTGACTCAGCCACGGACAAACACACCA...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACCACATAGAAGTCTTCTaGGAAGGACTCGAACAACGC +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYHIEVF*EGLEQR
Trigger: GCGTTGTTCGAGTCCTTCCCAGAAGACTTCTATGTG...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCACATAGAAGTCTTCTaGGAAGGACTCGAACAACGC +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCHIEVF*EGLEQR
Trigger: GCGTTGTTCGAGTCCTTCCCAGAAGACTTCTATGTG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACGTTCAGTTTTCACTTTaGTGGGGCCACAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDVQFSL*WGHNFH
Trigger: GTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAAC...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCGTAATCAGGGTCTTCTaGCTCCTCCTTCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGVIRVF*LLLHCH
Trigger: GTGACAGTGAAGGAGGAGTCAGAAGACCCTGATTAC...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGTAATCAGGGTCTTCTaGCTCCTCCTTCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSVIRVF*LLLHCH
Trigger: GTGACAGTGAAGGAGGAGTCAGAAGACCCTGATTAC...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACTCCATTTCTCAAAGTTaGACTCCCTCACTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYSISQS*TPSLCA
Trigger: AGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGA...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCATTCCAATCTTCTTTaGCTGGTGTGTTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCHSNLL*LVCLSV
Trigger: CACGGACAAACACACCAGTCAAAGAAGATTGGAATG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACGAACCGCAGAGGTCTaGGGACTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVRTAEV*GLLLLG
Trigger: CCCCAACAACAGCAGTCCTCAGACCTCTGCGGTTCG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCCTCTCCCTCGAGGCTTaGAGGGAACATTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGLSLEA*REHLNH
Trigger: ATGGTTCAAATGTTCCCTTCAAGCCTCGAGGGAGAG...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACCCCCGCACTTTTCATTaGAGAGGTTCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDPRTFH*RGSPLS
Trigger: AGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGG...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGCCCCGCACTTTTCATTaGAGAGGTTCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKPRTFH*RGSPLS
Trigger: AGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGG...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCCTTCAGACTCGTTCTaGTCAACCAGCTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCPSDSF*STSWLL
Trigger: TAATAACCAGCTGGTTGATCAGAACGAGTCTGAAGG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAGGTCTGGCTCCTGCTTaGTCTGTGAACTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAGLAPA*SVNSHL
Trigger: CAGATGGGAGTTCACAGATCAAGCAGGAGCCAGACC...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGCCTCGGCAAATTTCTTaGAGAAGAGCTGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKPRQIS*RRAGQP
Trigger: TGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGG...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCTCATCCGATTGGCCTaGGTGGTAGATTTCATCTTA +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCLIRLA*VVDFIL
Trigger: TAAGATGAAATCTACCACCCAGGCCAATCGGATGAG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGTGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKWCVCP*LSHFSC
Trigger: ACAACTGAAGTGACTCAGCCACGGACAAACACACCA...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACTGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDWCVCP*LSHFSC
Trigger: ACAACTGAAGTGACTCAGCCACGGACAAACACACCA...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGCCAATCTTCTTTGACTaGTGTGTTTGTCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKPIFFD*CVCPWL
Trigger: CAGCCACGGACAAACACACCAGTCAAAGAAGATTGG...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACCACATAGAAGTCTTCTaGGAAGGACTCGAACAACGC +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDHIEVF*EGLEQR
Trigger: GCGTTGTTCGAGTCCTTCCCAGAAGACTTCTATGTG...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGTCATCATCTTCTGCTaGCACTTCCACTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSVIIFC*HFHFRS
Trigger: GGAACGGAAGTGGAAGTGCCAGCAGAAGATGATGAC...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082057.10
ENSMUST00000173341.9
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCCTCCACCGTTTTTCTaGGTGTTTCAATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCPPPFF*VFQFLQ
Trigger: CTGTAGAAATTGAAACACTCAGAAAAACGGTGGAGG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGTTCAGTTTTCACTTTaGTGGGGCCACAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSVQFSL*WGHNFH
Trigger: GTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAAC...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCGTCCTCACTGGTTTCTaGAGGGACATGTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGVLTGF*RDMLSR
Trigger: TCTACTCAACATGTCCCTTCAGAAACCAGTGAGGAC...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR TCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACTCCATTTCTCAAAGTTaGACTCCCTCACTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDSISQS*TPSLCA
Trigger: AGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGA...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCCTTCACAGCCTCTGTaGGGCCCAGAGCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHPSQPL*GPEPEQ
Trigger: TTGCTCAGGCTCTGGGCCTCACAGAGGCTGTGAAGG...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCGAACCGCAGAGGTCTaGGGACTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHRTAEV*GLLLLG
Trigger: CCCCAACAACAGCAGTCCTCAGACCTCTGCGGTTCG...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTCCCCGCACTTTTCATTaGAGAGGTTCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSPRTFH*RGSPLS
Trigger: AGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGG...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGCCTTCAGACTCGTTCTaGTCAACCAGCTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKPSDSF*STSWLL
Trigger: TAATAACCAGCTGGTTGATCAGAACGAGTCTGAAGG...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCATCTCATACACAGCAATaGAGGCCACCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHASHTQQ*RPPQPW
Trigger: CCAAGGCTGAGGTGGCCTGCATTGCTGTGTATGAGA...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGTAGATTTCATCTTATaGATCTCGGCGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYVDFIL*ISAAFS
Trigger: AGAAAAGGCCGCCGAGATGCATAAGATGAAATCTAC...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGGTAGATTTCATCTTATaGATCTCGGCGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTVDFIL*ISAAFS
Trigger: AGAAAAGGCCGCCGAGATGCATAAGATGAAATCTAC...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGGACCACTGTGGATTTaGCTAAAGCTTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSGPLWI*LKLSHS
Trigger: GCTATGGGAAAGCTTTAGGCAAATCCACAGTGGTCC...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCGGACCACTGTGGATTTaGCTAAAGCTTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPGPLWI*LKLSHS
Trigger: GCTATGGGAAAGCTTTAGGCAAATCCACAGTGGTCC...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCGGACCACTGTGGATTTaGCTAAAGCTTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGGPLWI*LKLSHS
Trigger: GCTATGGGAAAGCTTTAGGCAAATCCACAGTGGTCC...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCCATTTCCAGAGAAATaGCAGAATCTTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCPFPEK*QNLLWV
Trigger: AACCCACAGAAGATTCTGGCATTTCTCTGGAAATGG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACCCATTTCCAGAGAAATaGCAGAATCTTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYPFPEK*QNLLWV
Trigger: AACCCACAGAAGATTCTGGCATTTCTCTGGAAATGG...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCCCTCGGCAAATTTCTTaGAGAAGAGCTGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPPRQIS*RRAGQP
Trigger: TGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGG...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCCCTCGGCAAATTTCTTaGAGAAGAGCTGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGPRQIS*RRAGQP
Trigger: TGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGG...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGAGGTTCTCCACTTTCTaGTTCAGGTCTGTGATCTTA +
Preference number: 4 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTRFSTF*FRSVIL
Trigger: TAAGATCACAGACCTGAAGCAGAAAGTGGAGAACCT...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCAGGTTCTCCACTTTCTaGTTCAGGTCTGTGATCTTA +
Preference number: 4 (lower is better)
Translates to: RNISLTGTRTTAQGSARCRFSTF*FRSVIL
Trigger: TAAGATCACAGACCTGAAGCAGAAAGTGGAGAACCT...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTAGTAGAATCTTCTGCTaGCACTTCCACTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSSRIFC*HFHFRS
Trigger: GGAACGGAAGTGGAAGTGCCAGCAGAAGATTCTACT...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR CCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTTGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSWCVCP*LSHFSC
Trigger: ACAACTGAAGTGACTCAGCCACGGACAAACACACCA...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCCCAATCTTCTTTGACTaGTGTGTTTGTCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPPIFFD*CVCPWL
Trigger: CAGCCACGGACAAACACACCAGTCAAAGAAGATTGG...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTTTTGAACCATTGGTCTaGGTAGGAGTTCGAACCGCA +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSFEPLV*VGVRTA
Trigger: TGCGGTTCGAACTCCTACCCAGACCAATGGTTCAAA...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCTTTGAACCATTGGTCTaGGTAGGAGTTCGAACCGCA +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPFEPLV*VGVRTA
Trigger: TGCGGTTCGAACTCCTACCCAGACCAATGGTTCAAA...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCCACATAGAAGTCTTCTaGGAAGGACTCGAACAACGC +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGHIEVF*EGLEQR
Trigger: GCGTTGTTCGAGTCCTTCCCAGAAGACTTCTATGTG...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGCCTCCACCGTTTTTCTaGGTGTTTCAATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKPPPFF*VFQFLQ
Trigger: CTGTAGAAATTGAAACACTCAGAAAAACGGTGGAGG...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCTCCATTTCTCAAAGTTaGACTCCCTCACTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPSISQS*TPSLCA
Trigger: AGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGA...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGTTGGCTTTGATGGCTTaGGCATATTTTCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTLALMA*AYFLSN
Trigger: GTTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAA...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCCATTCCAATCTTCTTTaGCTGGTGTGTTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGHSNLL*LVCLSV
Trigger: CACGGACAAACACACCAGTCAAAGAAGATTGGAATG...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCCATTCCAATCTTCTTTaGCTGGTGTGTTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPHSNLL*LVCLSV
Trigger: CACGGACAAACACACCAGTCAAAGAAGATTGGAATG...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTCCTTCAGACTCGTTCTaGTCAACCAGCTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSPSDSF*STSWLL
Trigger: TAATAACCAGCTGGTTGATCAGAACGAGTCTGAAGG...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCCCTTCAGACTCGTTCTaGTCAACCAGCTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPPSDSF*STSWLL
Trigger: TAATAACCAGCTGGTTGATCAGAACGAGTCTGAAGG...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTAGGTCTGGCTCCTGCTTaGTCTGTGAACTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVGLAPA*SVNSHL
Trigger: CAGATGGGAGTTCACAGATCAAGCAGGAGCCAGACC...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACGTAGATTTCATCTTATaGATCTCGGCGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDVDFIL*ISAAFS
Trigger: AGAAAAGGCCGCCGAGATGCATAAGATGAAATCTAC...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACCCATTTCCAGAGAAATaGCAGAATCTTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDPFPEK*QNLLWV
Trigger: AACCCACAGAAGATTCTGGCATTTCTCTGGAAATGG...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAGGTTCTCCACTTTCTaGTTCAGGTCTGTGATCTTA +
Preference number: 4 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKRFSTF*FRSVIL
Trigger: TAAGATCACAGACCTGAAGCAGAAAGTGGAGAACCT...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACAGGTTCTCCACTTTCTaGTTCAGGTCTGTGATCTTA +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDRFSTF*FRSVIL
Trigger: TAAGATCACAGACCTGAAGCAGAAAGTGGAGAACCT...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCCTCATCCGATTGGCCTaGGTGGTAGATTTCATCTTA +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGLIRLA*VVDFIL
Trigger: TAAGATGAAATCTACCACCCAGGCCAATCGGATGAG...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAGCACAGGGACCACTGTaGATTTGCCTAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAAQGPL*ICLKLS
Trigger: GGAAAGCTTTAGGCAAATCCACAGTGGTCCCTGTGC...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGTGAGTGAGCAGCTCTaGTCTCTTGATAACAAATTT +
Preference number: 4 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYVSEQL*SLDNKF
Trigger: AAATTTGTTATCAAGAGACCAGAGCTGCTCACTCAC...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGGTGAGTGAGCAGCTCTaGTCTCTTGATAACAAATTT +
Preference number: 4 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTVSEQL*SLDNKF
Trigger: AAATTTGTTATCAAGAGACCAGAGCTGCTCACTCAC...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAGTCATCATCTTCTGCTaGCACTTCCACTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAVIIFC*HFHFRS
Trigger: GGAACGGAAGTGGAAGTGCCAGCAGAAGATGATGAC...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082057.10
ENSMUST00000173341.9
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACAATCTTTTCTGGTATTaGCAAAAGCACGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDNLFWY*QKHALF
Trigger: AAAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATT...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCCCTCCACCGTTTTTCTaGGTGTTTCAATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPPPPFF*VFQFLQ
Trigger: CTGTAGAAATTGAAACACTCAGAAAAACGGTGGAGG...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTCCTCCACCGTTTTTCTaGGTGTTTCAATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSPPPFF*VFQFLQ
Trigger: CTGTAGAAATTGAAACACTCAGAAAAACGGTGGAGG...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAGTTCAGTTTTCACTTTaGTGGGGCCACAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAVQFSL*WGHNFH
Trigger: GTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAAC...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCATCTGAAGGGACATGTTaGGTAGAATCTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHASEGTC*VESSAG
Trigger: GCCAGCAGAAGATTCTACTCAACATGTCCCTTCAGA...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR GCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGTAGATTTCATCTTATaGATCTCGGCGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSVDFIL*ISAAFS
Trigger: AGAAAAGGCCGCCGAGATGCATAAGATGAAATCTAC...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTAGGTTCTCCACTTTCTaGTTCAGGTCTGTGATCTTA +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSRFSTF*FRSVIL
Trigger: TAAGATCACAGACCTGAAGCAGAAAGTGGAGAACCT...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCAGGTTCTCCACTTTCTaGTTCAGGTCTGTGATCTTA +
Preference number: 4 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPRFSTF*FRSVIL
Trigger: TAAGATCACAGACCTGAAGCAGAAAGTGGAGAACCT...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCACCAATCTTCTTTGACTaGTGTGTTTGTCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAPIFFD*CVCPWL
Trigger: CAGCCACGGACAAACACACCAGTCAAAGAAGATTGG...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCATTTGAACCATTGGTCTaGGTAGGAGTTCGAACCGCA +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAFEPLV*VGVRTA
Trigger: TGCGGTTCGAACTCCTACCCAGACCAATGGTTCAAA...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCACACATAGAAGTCTTCTaGGAAGGACTCGAACAACGC +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAHIEVF*EGLEQR
Trigger: GCGTTGTTCGAGTCCTTCCCAGAAGACTTCTATGTG...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCATCCATTTCTCAAAGTTaGACTCCCTCACTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHASISQS*TPSLCA
Trigger: AGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGA...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTTTGGCTTTGATGGCTTaGGCATATTTTCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSLALMA*AYFLSN
Trigger: GTTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAA...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCACATTCCAATCTTCTTTaGCTGGTGTGTTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAHSNLL*LVCLSV
Trigger: CACGGACAAACACACCAGTCAAAGAAGATTGGAATG...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACTCTCCCTCGAGGCTTaGAGGGAACATTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVLSLEA*REHLNH
Trigger: ATGGTTCAAATGTTCCCTTCAAGCCTCGAGGGAGAG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCACTCATCCGATTGGCCTaGGTGGTAGATTTCATCTTA +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHALIRLA*VVDFIL
Trigger: TAAGATGAAATCTACCACCCAGGCCAATCGGATGAG...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTAGCACAGGGACCACTGTaGATTTGCCTAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVAQGPL*ICLKLS
Trigger: GGAAAGCTTTAGGCAAATCCACAGTGGTCCCTGTGC...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACTTCGGGGTCCTCACTaGTTTCTGAAGGGACATGTT +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVLRGPH*FLKGHV
Trigger: AACATGTCCCTTCAGAAACCAGTGAGGACCCCGAAG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR CCA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCGTGAGTGAGCAGCTCTaGTCTCTTGATAACAAATTT +
Preference number: 4 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGVSEQL*SLDNKF
Trigger: AAATTTGTTATCAAGAGACCAGAGCTGCTCACTCAC...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCACCTCCACCGTTTTTCTaGGTGTTTCAATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAPPPFF*VFQFLQ
Trigger: CTGTAGAAATTGAAACACTCAGAAAAACGGTGGAGG...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTAGTTCAGTTTTCACTTTaGTGGGGCCACAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVVQFSL*WGHNFH
Trigger: GTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAAC...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACGTAATCAGGGTCTTCTaGCTCCTCCTTCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHVIRVF*LLLHCH
Trigger: GTGACAGTGAAGGAGGAGTCAGAAGACCCTGATTAC...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACCCCGCACTTTTCATTaGAGAGGTTCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVPRTFH*RGSPLS
Trigger: AGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAGTAGATTTCATCTTATaGATCTCGGCGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAVDFIL*ISAAFS
Trigger: AGAAAAGGCCGCCGAGATGCATAAGATGAAATCTAC...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACCTCGGCAAATTTCTTaGAGAAGAGCTGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVPRQIS*RRAGQP
Trigger: TGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAAGGTTCTCCACTTTCTaGTTCAGGTCTGTGATCTTA +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHARFSTF*FRSVIL
Trigger: TAAGATCACAGACCTGAAGCAGAAAGTGGAGAACCT...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTATGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVWCVCP*LSHFSC
Trigger: ACAACTGAAGTGACTCAGCCACGGACAAACACACCA...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACCAATCTTCTTTGACTaGTGTGTTTGTCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVPIFFD*CVCPWL
Trigger: CAGCCACGGACAAACACACCAGTCAAAGAAGATTGG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTATTTGAACCATTGGTCTaGGTAGGAGTTCGAACCGCA +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVFEPLV*VGVRTA
Trigger: TGCGGTTCGAACTCCTACCCAGACCAATGGTTCAAA...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACACATAGAAGTCTTCTaGGAAGGACTCGAACAACGC +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVHIEVF*EGLEQR
Trigger: GCGTTGTTCGAGTCCTTCCCAGAAGACTTCTATGTG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCATTGGCTTTGATGGCTTaGGCATATTTTCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHALALMA*AYFLSN
Trigger: GTTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAA...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCCCCGCACTTTTCATTaGAGAGGTTCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHPRTFH*RGSPLS
Trigger: AGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGG...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACCTTCAGACTCGTTCTaGTCAACCAGCTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVPSDSF*STSWLL
Trigger: TAATAACCAGCTGGTTGATCAGAACGAGTCTGAAGG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCCTCGGCAAATTTCTTaGAGAAGAGCTGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHPRQIS*RRAGQP
Trigger: TGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGG...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAGTGAGTGAGCAGCTCTaGTCTCTTGATAACAAATTT +
Preference number: 4 (lower is better)
Translates to: KYITELAGTGPKALLHHAVSEQL*SLDNKF
Trigger: AAATTTGTTATCAAGAGACCAGAGCTGCTCACTCAC...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACTTTGAACCATTGGTCTaGGTAGGAGTTCGAACCGCA +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHFEPLV*VGVRTA
Trigger: TGCGGTTCGAACTCCTACCCAGACCAATGGTTCAAA...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACATAGAAGTCTTCTaGGAAGGACTCGAACAACGC +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHHIEVF*EGLEQR
Trigger: GCGTTGTTCGAGTCCTTCCCAGAAGACTTCTATGTG...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCATTCCAATCTTCTTTaGCTGGTGTGTTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHHSNLL*LVCLSV
Trigger: CACGGACAAACACACCAGTCAAAGAAGATTGGAATG...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR GCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACCATTTCCAGAGAAATaGCAGAATCTTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVPFPEK*QNLLWV
Trigger: AACCCACAGAAGATTCTGGCATTTCTCTGGAAATGG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CCA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTAGTGAGTGAGCAGCTCTaGTCTCTTGATAACAAATTT +
Preference number: 4 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVVSEQL*SLDNKF
Trigger: AAATTTGTTATCAAGAGACCAGAGCTGCTCACTCAC...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACAATCTTTTCTGGTATTaGCAAAAGCACGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHNLFWY*QKHALF
Trigger: AAAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATT...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR TCA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACTTGGCTTTGATGGCTTaGGCATATTTTCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: LYKYITELAGTGPKALLHLALMA*AYFLSN
Trigger: GTTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAA...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCTTGCGCTTGCCAGCGTaGGCGGGCTCCGGGACGGGC +
Preference number: 5 (lower is better)
Translates to: SPPLAGGAAECKTTELVFLRLPA*AGSGTG
Trigger: GCCCGTCCCGGAGCCCGCCAACGCTGGCAAGCGCAA...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGTTGCGCTTGCCAGCGTaGGCGGGCTCCGGGACGGGC +
Preference number: 5 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTLRLPA*AGSGTG
Trigger: GCCCGTCCCGGAGCCCGCCAACGCTGGCAAGCGCAA...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCCGACTGAAGAGGTCGTaGACCTGCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPPLAGGAAECKTTELVFRLKRS*TCSRSC
Trigger: GCAGCTGCGGGAGCAGGTCAACGACCTCTTCAGTCG...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGTTGCGCTTGCCAGCGTaGGCGGGCTCCGGGACGGGC +
Preference number: 5 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKLRLPA*AGSGTG
Trigger: GCCCGTCCCGGAGCCCGCCAACGCTGGCAAGCGCAA...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACTTGCGCTTGCCAGCGTaGGCGGGCTCCGGGACGGGC +
Preference number: 5 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDLRLPA*AGSGTG
Trigger: GCCCGTCCCGGAGCCCGCCAACGCTGGCAAGCGCAA...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCCGACTGAAGAGGTCGTaGACCTGCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RGSEASLSSCTARMHWLLRLKRS*TCSRSC
Trigger: GCAGCTGCGGGAGCAGGTCAACGACCTCTTCAGTCG...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCTTGCGCTTGCCAGCGTaGGCGGGCTCCGGGACGGGC +
Preference number: 5 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPLRLPA*AGSGTG
Trigger: GCCCGTCCCGGAGCCCGCCAACGCTGGCAAGCGCAA...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTTGCGCTTGCCAGCGTaGGCGGGCTCCGGGACGGGC +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGLRLPA*AGSGTG
Trigger: GCCCGTCCCGGAGCCCGCCAACGCTGGCAAGCGCAA...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCTCCACACTCATCCGATaGGCCTGGGTGGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: SPPLAGGAAECKTTELVFSTLIR*AWVVDF
Trigger: GAAATCTACCACCCAGGCCAATCGGATGAGTGTGGA...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGGGAGTGATGGCTTCCTaGCAAAGCCTTCGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: ERGSEASLSSCTARMHWLGVMAS*QSLRKG
Trigger: CCCCTTTCGAAGGCTTTGCAAGGAAGCCATCACTCC...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000174155.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCGGGTCTGGCTCCTGCTaGATCTGTGAACTCCCATCT +
Preference number: 5 (lower is better)
Translates to: SEALRLASPAALHGCTGCGSGSC*ICELPS
Trigger: AGATGGGAGTTCACAGATCAAGCAGGAGCCAGACCC...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCGGGTCTGGCTCCTGCTaGATCTGTGAACTCCCATCT +
Preference number: 5 (lower is better)
Translates to: RGSEASLSSCTARMHWLLGSGSC*ICELPS
Trigger: AGATGGGAGTTCACAGATCAAGCAGGAGCCAGACCC...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCCACACTCATCCGATaGGCCTGGGTGGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: SEALRLASPAALHGCTGCSTLIR*AWVVDF
Trigger: GAAATCTACCACCCAGGCCAATCGGATGAGTGTGGA...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCTCCACACTCATCCGATaGGCCTGGGTGGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: RGSEASLSSCTARMHWLLSTLIR*AWVVDF
Trigger: GAAATCTACCACCCAGGCCAATCGGATGAGTGTGGA...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGACCATCTTCCTCAGTTaGGTGATGCGAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: ERGSEASLSSCTARMHWLTIFLS*VMRAYH
Trigger: GTGGTACGCTCGCATCACCAAACTGAGGAAGATGGT...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCGCCTCGGCAAATTTCTaGCAGAAGAGCTGGTCAACC +
Preference number: 5 (lower is better)
Translates to: SEALRLASPAALHGCTGCASANF*QKSWST
Trigger: GGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGC...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACCGACTGAAGAGGTCGTaGACCTGCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDRLKRS*TCSRSC
Trigger: GCAGCTGCGGGAGCAGGTCAACGACCTCTTCAGTCG...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGCGACTGAAGAGGTCGTaGACCTGCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKRLKRS*TCSRSC
Trigger: GCAGCTGCGGGAGCAGGTCAACGACCTCTTCAGTCG...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCTCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: SPPLAGGAAECKTTELVFSPHFS*KRFSTF
Trigger: GAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGA...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTCGACTGAAGAGGTCGTaGACCTGCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSRLKRS*TCSRSC
Trigger: GCAGCTGCGGGAGCAGGTCAACGACCTCTTCAGTCG...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCCGACTGAAGAGGTCGTaGACCTGCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGRLKRS*TCSRSC
Trigger: GCAGCTGCGGGAGCAGGTCAACGACCTCTTCAGTCG...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCCGACTGAAGAGGTCGTaGACCTGCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPRLKRS*TCSRSC
Trigger: GCAGCTGCGGGAGCAGGTCAACGACCTCTTCAGTCG...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCTTCCATTTCTCAAAGTaGAACTCCCTCACTTTGCGC +
Preference number: 5 (lower is better)
Translates to: SPPLAGGAAECKTTELVFFHFSK*NSLTLR
Trigger: GCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAA...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGTCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: ERGSEASLSSCTARMHWLSPHFS*KRFSTF
Trigger: GAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGA...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTTTCTTGGAGGGCTTTaGGAAGAGGTGCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SEALRLASPAALHGCTGCFLGGL*EEVLSL
Trigger: CAAAGAGAGCACCTCTTCCAAAAGCCCTCCAAGAAA...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGTTTCTTGGAGGGCTTTaGGAAGAGGTGCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: ERGSEASLSSCTARMHWLFLGGL*EEVLSL
Trigger: CAAAGAGAGCACCTCTTCCAAAAGCCCTCCAAGAAA...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGGGGTCTGGCTCCTGCTaGATCTGTGAACTCCCATCT +
Preference number: 5 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTGSGSC*ICELPS
Trigger: AGATGGGAGTTCACAGATCAAGCAGGAGCCAGACCC...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACGGAGTGATGGCTTCCTaGCAAAGCCTTCGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDGVMAS*QSLRKG
Trigger: CCCCTTTCGAAGGCTTTGCAAGGAAGCCATCACTCC...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000174155.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGGGAGTGATGGCTTCCTaGCAAAGCCTTCGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKGVMAS*QSLRKG
Trigger: CCCCTTTCGAAGGCTTTGCAAGGAAGCCATCACTCC...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000174155.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCTTCCATTTCTCAAAGTaGAACTCCCTCACTTTGCGC +
Preference number: 5 (lower is better)
Translates to: RGSEASLSSCTARMHWLLFHFSK*NSLTLR
Trigger: GCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAA...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGACCATCTTCCTCAGTTaGGTGATGCGAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTTIFLS*VMRAYH
Trigger: GTGGTACGCTCGCATCACCAAACTGAGGAAGATGGT...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCACCATCTTCCTCAGTTaGGTGATGCGAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: RNISLTGTRTTAQGSARCTIFLS*VMRAYH
Trigger: GTGGTACGCTCGCATCACCAAACTGAGGAAGATGGT...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGGCCTCGGCAAATTTCTaGCAGAAGAGCTGGTCAACC +
Preference number: 5 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTASANF*QKSWST
Trigger: GGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGC...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGCCTCGGCAAATTTCTaGCAGAAGAGCTGGTCAACC +
Preference number: 5 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYASANF*QKSWST
Trigger: GGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGC...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGGGGTCTGGCTCCTGCTaGATCTGTGAACTCCCATCT +
Preference number: 5 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKGSGSC*ICELPS
Trigger: AGATGGGAGTTCACAGATCAAGCAGGAGCCAGACCC...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACTCCACACTCATCCGATaGGCCTGGGTGGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDSTLIR*AWVVDF
Trigger: GAAATCTACCACCCAGGCCAATCGGATGAGTGTGGA...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGACCATCTTCCTCAGTTaGGTGATGCGAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKTIFLS*VMRAYH
Trigger: GTGGTACGCTCGCATCACCAAACTGAGGAAGATGGT...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGGCCTCGGCAAATTTCTaGCAGAAGAGCTGGTCAACC +
Preference number: 5 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKASANF*QKSWST
Trigger: GGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGC...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACGCCTCGGCAAATTTCTaGCAGAAGAGCTGGTCAACC +
Preference number: 5 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDASANF*QKSWST
Trigger: GGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGC...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCACATTCCAATCTTCTTaGACTGGTGTGTTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: RGSEASLSSCTARMHWLLTFQSS*TGVFVR
Trigger: ACGGACAAACACACCAGTCAAAGAAGATTGGAATGT...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTCCTAATGACAGTGAACTaGATAAACTCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: RGSEASLSSCTARMHWLLLMTVN*INSAES
Trigger: AGACTCTGCGGAGTTTATCAAGTTCACTGTCATTAG...GAGCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCGGGTCTGGCTCCTGCTaGATCTGTGAACTCCCATCT +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGGSGSC*ICELPS
Trigger: AGATGGGAGTTCACAGATCAAGCAGGAGCCAGACCC...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGGGTCTGGCTCCTGCTaGATCTGTGAACTCCCATCT +
Preference number: 5 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSGSGSC*ICELPS
Trigger: AGATGGGAGTTCACAGATCAAGCAGGAGCCAGACCC...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCGGAGTGATGGCTTCCTaGAATGTTATACTGATAGTA +
Preference number: 5 (lower is better)
Translates to: SPPLAGGAAECKTTELVFGVMAS*NVILIV
Trigger: TACTATCAGTATAACATTCAAGGAAGCCATCACTCC...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174354.8
ENSMUST00000174513.8
CDS-3UTR CAA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCAAATCTTTTCTGGTATaGACAAAAGCACGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SEALRLASPAALHGCTGCKSFLV*TKARPL
Trigger: AAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATTT...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTTCCACACTCATCCGATaGGCCTGGGTGGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSSTLIR*AWVVDF
Trigger: GAAATCTACCACCCAGGCCAATCGGATGAGTGTGGA...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCCCTCCCCTGGCAGGAGGGGCAGCCGAGTGCAAGACCACGGAACTGGTCTTCAGTTTCAGAAGGGCCTaGAATGTTATACTGATAGTA +
Preference number: 5 (lower is better)
Translates to: SPPLAGGAAECKTTELVFSFRRA*NVILIV
Trigger: TACTATCAGTATAACATTCAAGGCCCTTCTGAAACT...GAAGACCAGTTCCGTGGTCTTGCACTCGGCTGCCCCTCCTGCCAGGGGAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000174155.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCACCATCTTCCTCAGTTaGGTGATGCGAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPTIFLS*VMRAYH
Trigger: GTGGTACGCTCGCATCACCAAACTGAGGAAGATGGT...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCACCATCTTCCTCAGTTaGGTGATGCGAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGTIFLS*VMRAYH
Trigger: GTGGTACGCTCGCATCACCAAACTGAGGAAGATGGT...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCGCCTCGGCAAATTTCTaGCAGAAGAGCTGGTCAACC +
Preference number: 5 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPASANF*QKSWST
Trigger: GGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGC...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCGCCTCGGCAAATTTCTaGCAGAAGAGCTGGTCAACC +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGASANF*QKSWST
Trigger: GGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGC...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGTCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTSPHFS*KRFSTF
Trigger: GAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGA...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCTTTCTTGGAGGGCTTTaGGAAGAGGTGCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RNISLTGTRTTAQGSARCFLGGL*EEVLSL
Trigger: CAAAGAGAGCACCTCTTCCAAAAGCCCTCCAAGAAA...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTACGACTGAAGAGGTCGTaGACCTGCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVRLKRS*TCSRSC
Trigger: GCAGCTGCGGGAGCAGGTCAACGACCTCTTCAGTCG...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS CCA 90 bp GCTTCCGTGCTTCCCAAGGCCTCGGCAAATTTCTTGCAGAAGAGCTaGTCAACCATCTTCCTCAGTTTGGTGATGCGAGCGTACCACTCT +
Preference number: 5 (lower is better)
Translates to: ASVLPKASANFLQKS*STIFLSLVMRAYHS
Trigger: AGAGTGGTACGCTCGCATCACCAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGCCTTGGGAAGCACGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174133.5
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGAGTTTCAGAAGGGCCTaGAATGTTATACTGATAGTA +
Preference number: 5 (lower is better)
Translates to: ERGSEASLSSCTARMHWLSFRRA*NVILIV
Trigger: TACTATCAGTATAACATTCAAGGCCCTTCTGAAACT...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000174155.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAGGAGTGATGGCTTCCTaGCAAAGCCTTCGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: KYITELAGTGPKALLHHAGVMAS*QSLRKG
Trigger: CCCCTTTCGAAGGCTTTGCAAGGAAGCCATCACTCC...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000174155.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACTTCCATTTCTCAAAGTaGAACTCCCTCACTTTGCGC +
Preference number: 5 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYFHFSK*NSLTLR
Trigger: GCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAA...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GAGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGTTTGGCTTTGATGGCTaGAGCATATTTTCTTTCGAA +
Preference number: 5 (lower is better)
Translates to: ERGSEASLSSCTARMHWLFGFDG*SIFSFE
Trigger: TTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAAA...CAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGCGAGGCTCTGAGGCTAGCCTCTCCAGCTGCACTGCACGGATGCACTGGCTGCTTTGGCTTTGATGGCTaGAGCATATTTTCTTTCGAA +
Preference number: 5 (lower is better)
Translates to: SEALRLASPAALHGCTGCFGFDG*SIFSFE
Trigger: TTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAAA...GCAGCCAGTGCATCCGTGCAGTGCAGCTGGAGAGGCTAGCCTCAGAGCCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACTCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDSPHFS*KRFSTF
Trigger: GAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGA...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAGGGTCTGGCTCCTGCTaGATCTGTGAACTCCCATCT +
Preference number: 5 (lower is better)
Translates to: KYITELAGTGPKALLHHAGSGSC*ICELPS
Trigger: AGATGGGAGTTCACAGATCAAGCAGGAGCCAGACCC...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS TCA 90 bp GTCACCTCAACTTCGGGGTCCTCACTGGTTTCTGAAGGGACATGTTaGGTAGAATCTTCTGCTGGCACTTCCACTTCCGTTCCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: VTSTSGSSLVSEGTC*VESSAGTSTSVPSL
Trigger: CAACGAGGGAACGGAAGTGGAAGTGCCAGCAGAAGATTCTACTCAACATGTCCCTTCAGAAACCAGTGAGGACCCCGAAGTTGAGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR CAA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCATCCACACTCATCCGATaGGCCTGGGTGGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: KYITELAGTGPKALLHHASTLIR*AWVVDF
Trigger: GAAATCTACCACCCAGGCCAATCGGATGAGTGTGGA...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAACCATCTTCCTCAGTTaGGTGATGCGAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: KYITELAGTGPKALLHHATIFLS*VMRAYH
Trigger: GTGGTACGCTCGCATCACCAAACTGAGGAAGATGGT...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCACATTCCAATCTTCTTaGACTGGTGTGTTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: RNISLTGTRTTAQGSARCTFQSS*TGVFVR
Trigger: ACGGACAAACACACCAGTCAAAGAAGATTGGAATGT...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACACATTCCAATCTTCTTaGACTGGTGTGTTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYTFQSS*TGVFVR
Trigger: ACGGACAAACACACCAGTCAAAGAAGATTGGAATGT...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGSPHFS*KRFSTF
Trigger: GAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGA...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCTCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPSPHFS*KRFSTF
Trigger: GAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGA...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTTCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSSPHFS*KRFSTF
Trigger: GAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGA...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCTTTCTTGGAGGGCTTTaGGAAGAGGTGCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPFLGGL*EEVLSL
Trigger: CAAAGAGAGCACCTCTTCCAAAAGCCCTCCAAGAAA...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTTTCTTGGAGGGCTTTaGGAAGAGGTGCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGFLGGL*EEVLSL
Trigger: CAAAGAGAGCACCTCTTCCAAAAGCCCTCCAAGAAA...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACCTAATGACAGTGAACTaGATAAACTCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYLMTVN*INSAES
Trigger: AGACTCTGCGGAGTTTATCAAGTTCACTGTCATTAG...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCCTAATGACAGTGAACTaGATAAACTCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: RNISLTGTRTTAQGSARCLMTVN*INSAES
Trigger: AGACTCTGCGGAGTTTATCAAGTTCACTGTCATTAG...GCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS TCA 90 bp ACATTTGAACCATTGGTCTGGGTAGGAGTTCGAACCGCAGAGGTCTaGGGACTGCTGTTGTTGGGGCCTTCCACAGTGACCTCAATTTCA +
Preference number: 5 (lower is better)
Translates to: TFEPLVWVGVRTAEV*GLLLLGPSTVTSIS
Trigger: TGAAATTGAGGTCACTGTGGAAGGCCCCAACAACAGCAGTCCTCAGACCTCTGCGGTTCGAACTCCTACCCAGACCAATGGTTCAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGAAATCTTTTCTGGTATaGACAAAAGCACGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: TGTRTTAQGSARCIRNPTKSFLV*TKARPL
Trigger: AAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATTT...CGTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTTCCATTTCTCAAAGTaGAACTCCCTCACTTTGCGC +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGFHFSK*NSLTLR
Trigger: GCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAA...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTTTCCATTTCTCAAAGTaGAACTCCCTCACTTTGCGC +
Preference number: 5 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSFHFSK*NSLTLR
Trigger: GCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAA...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGCTAATGACAGTGAACTaGATAAACTCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKLMTVN*INSAES
Trigger: AGACTCTGCGGAGTTTATCAAGTTCACTGTCATTAG...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACCTAATGACAGTGAACTaGATAAACTCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDLMTVN*INSAES
Trigger: AGACTCTGCGGAGTTTATCAAGTTCACTGTCATTAG...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACGGAGTGATGGCTTCCTaGAATGTTATACTGATAGTA +
Preference number: 5 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYGVMAS*NVILIV
Trigger: TACTATCAGTATAACATTCAAGGAAGCCATCACTCC...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174354.8
ENSMUST00000174513.8
CDS GCA 90 bp AATAGTCATCATCTTCTGCTGGCACTTCCACTTCCGTTCCCTCGTTaGCTTCTGAGGAGTGATGGCTTCCAGAATCTTCTGTGGGTTCAG +
Preference number: 5 (lower is better)
Translates to: NSHHLLLALPLPFPR*LLRSDGFQNLLWVQ
Trigger: CTGAACCCACAGAAGATTCTGGAAGCCATCACTCCTCAGAAGGCAACGAGGGAACGGAAGTGGAAGTGCCAGCAGAAGATGATGACTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174133.5
CDS-3UTR CAA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACAGTTTCAGAAGGGCCTaGAATGTTATACTGATAGTA +
Preference number: 5 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYSFRRA*NVILIV
Trigger: TACTATCAGTATAACATTCAAGGCCCTTCTGAAACT...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000174155.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACTTTGGCTTTGATGGCTaGAGCATATTTTCTTTCGAA +
Preference number: 5 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYFGFDG*SIFSFE
Trigger: TTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAAA...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGAAACCCTACAGCAGCTCTGGTCTCTaGATAACAAATTTAATTCGA +
Preference number: 5 (lower is better)
Translates to: DGNTHHSPRLCPMHKKPYSSSGL*ITNLIR
Trigger: TCGAATTAAATTTGTTATCAAGAGACCAGAGCTGCT...GTAGGGTTTCTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCACATTCCAATCTTCTTaGACTGGTGTGTTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGTFQSS*TGVFVR
Trigger: ACGGACAAACACACCAGTCAAAGAAGATTGGAATGT...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCATCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: KYITELAGTGPKALLHHASPHFS*KRFSTF
Trigger: GAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGA...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCCTAATGACAGTGAACTaGATAAACTCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGLMTVN*INSAES
Trigger: AGACTCTGCGGAGTTTATCAAGTTCACTGTCATTAG...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCCTAATGACAGTGAACTaGATAAACTCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPLMTVN*INSAES
Trigger: AGACTCTGCGGAGTTTATCAAGTTCACTGTCATTAG...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS CCA 90 bp CTCCCATCTGTCTCTTTAATTTCTTCTGTTACTGGGACTTCCAACTaGCTTGCCTCGGCTGATTCTTGTATCACAGGGCCTTCAGACTCG +
Preference number: 5 (lower is better)
Translates to: LPSVSLISSVTGTSN*LASADSCITGPSDS
Trigger: CGAGTCTGAAGGCCCTGTGATACAAGAATCAGCCGAGGCAAGCCAGTTGGAAGTCCCAGTAACAGAAGAAATTAAAGAGACAGATGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTAAATCTTTTCTGGTATaGACAAAAGCACGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSKSFLV*TKARPL
Trigger: AAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATTT...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACTCCACACTCATCCGATaGGCCTGGGTGGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: LYKYITELAGTGPKALLHSTLIR*AWVVDF
Trigger: GAAATCTACCACCCAGGCCAATCGGATGAGTGTGGA...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CCAGACAGGTGGTTAGAGACTAACCAACCAGGCAGACACACAGCCCAGCCTGACAGTTTCAGAAGGGCCTaGAATGTTATACTGATAGTA +
Preference number: 5 (lower is better)
Translates to: PDRWLETNQPGRHTAQPDSFRRA*NVILIV
Trigger: TACTATCAGTATAACATTCAAGGCCCTTCTGAAACT...GTCAGGCTGGGCTGTGTGTCTGCCTGGTTGGTTAGTCTCTAACCACCTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000174155.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGCCCGATGCATAAGTTTGGCTTTGATGGCTaGAGCATATTTTCTTTCGAA +
Preference number: 5 (lower is better)
Translates to: YLTDGNTHHSPRLCPMHKFGFDG*SIFSFE
Trigger: TTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAAA...CTTATGCATCGGGCAGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCGGAGTGATGGCTTCCTaGAATGTTATACTGATAGTA +
Preference number: 5 (lower is better)
Translates to: KMPCRNISLTGTRTTAQGGVMAS*NVILIV
Trigger: TACTATCAGTATAACATTCAAGGAAGCCATCACTCC...GCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174354.8
ENSMUST00000174513.8
CDS-3UTR CAA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTGGAGTGATGGCTTCCTaGAATGTTATACTGATAGTA +
Preference number: 5 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSGVMAS*NVILIV
Trigger: TACTATCAGTATAACATTCAAGGAAGCCATCACTCC...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111261.12
ENSMUST00000173341.9
ENSMUST00000174354.8
ENSMUST00000174513.8
CDS TCA 90 bp ATCATCTTCAATGGTCACCTCAACTTCGGGGTCCTCACTGGTTTCTaGAGGGACATGTTGAGTAGAATCTTCTGCTGGCACTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: IIFNGHLNFGVLTGF*RDMLSRIFCWHFHF
Trigger: GAAGTGGAAGTGCCAGCAGAAGATTCTACTCAACATGTCCCTTCAGAAACCAGTGAGGACCCCGAAGTTGAGGTGACCATTGAAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS-3UTR CAA 90 bp GGAATCGTGATGGAGCTTGGGAAGAGGCTTAGTCACACACACAGACAGCAGCCCAGCAGCTCTGGTCTCTaGATAACAAATTTAATTCGA +
Preference number: 5 (lower is better)
Translates to: GIVMELGKRLSHTHRQQPSSSGL*ITNLIR
Trigger: TCGAATTAAATTTGTTATCAAGAGACCAGAGCTGCT...GGGCTGCTGTCTGTGTGTGTGACTAAGCCTCTTCCCAAGCTCCATCACGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp ATGCCCTGTAGGAATATCTCACTGACGGGAACACGCACCACAGCCCAAGGCTCTAGCAGCTCTGGTCTCTaGATAACAAATTTAATTCGA +
Preference number: 5 (lower is better)
Translates to: MPCRNISLTGTRTTAQGSSSSGL*ITNLIR
Trigger: TCGAATTAAATTTGTTATCAAGAGACCAGAGCTGCT...AGAGCCTTGGGCTGTGGTGCGTGTTCCCGTCAGTGAGATATTCCTACAGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp AAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCACGCAACATTCCAATCTTCTTaGACTGGTGTGTTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: KYITELAGTGPKALLHHATFQSS*TGVFVR
Trigger: ACGGACAAACACACCAGTCAAAGAAGATTGGAATGT...TGCGTGGTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTATTTCTTGGAGGGCTTTaGGAAGAGGTGCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVFLGGL*EEVLSL
Trigger: CAAAGAGAGCACCTCTTCCAAAAGCCCTCCAAGAAA...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS TCA 90 bp CAAATTTCTTGCAGAAGAGCTGGTCAACCATCTTCCTCAGTTTGGTaGTGCGAGCGTACCACTCTTCTTTCACTCCTGAGGCTGGTTTAT +
Preference number: 5 (lower is better)
Translates to: QISCRRAGQPSSSVW*CERTTLLSLLRLVY
Trigger: ATAAACCAGCCTCAGGAGTGAAAGAAGAGTGGTACGCTCGCATCACCAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174133.5
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTATTCCATTTCTCAAAGTaGAACTCCCTCACTTTGCGC +
Preference number: 5 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVFHFSK*NSLTLR
Trigger: GCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAA...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACTCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: LYKYITELAGTGPKALLHSPHFS*KRFSTF
Trigger: GAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGA...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACTTTCTTGGAGGGCTTTaGGAAGAGGTGCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LYKYITELAGTGPKALLHFLGGL*EEVLSL
Trigger: CAAAGAGAGCACCTCTTCCAAAAGCCCTCCAAGAAA...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACTTCCATTTCTCAAAGTaGAACTCCCTCACTTTGCGC +
Preference number: 5 (lower is better)
Translates to: LYKYITELAGTGPKALLHFHFSK*NSLTLR
Trigger: GCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAA...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTAACATTCCAATCTTCTTaGACTGGTGTGTTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVTFQSS*TGVFVR
Trigger: ACGGACAAACACACCAGTCAAAGAAGATTGGAATGT...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTAAAATCTTTTCTGGTATaGACAAAAGCACGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVKSFLV*TKARPL
Trigger: AAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATTT...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACACATTCCAATCTTCTTaGACTGGTGTGTTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: LYKYITELAGTGPKALLHTFQSS*TGVFVR
Trigger: ACGGACAAACACACCAGTCAAAGAAGATTGGAATGT...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACCTAATGACAGTGAACTaGATAAACTCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LYKYITELAGTGPKALLHLMTVN*INSAES
Trigger: AGACTCTGCGGAGTTTATCAAGTTCACTGTCATTAG...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACAAATCTTTTCTGGTATaGACAAAAGCACGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LYKYITELAGTGPKALLHKSFLV*TKARPL
Trigger: AAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATTT...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp CACGCGCATCTCATCACGCTGTGTAGCTCAATTCACAGAACTGCTGAGAAAGTATTTGGCTTTGATGGCTaGAGCATATTTTCTTTCGAA +
Preference number: 5 (lower is better)
Translates to: HAHLITLCSSIHRTAEKVFGFDG*SIFSFE
Trigger: TTCGAAAGAAAATATGCTCAAGCCATCAAAGCCAAA...TACTTTCTCAGCAGTTCTGTGAATTGAGCTACACAGCGTGATGAGATGCGCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS-3UTR CAA 90 bp TTATACAAGTATATTACAGAGCTGGCAGGAACGGGTCCCAAAGCTCTTCTCCACAGCAGCTCTGGTCTCTaGATAACAAATTTAATTCGA +
Preference number: 5 (lower is better)
Translates to: LYKYITELAGTGPKALLHSSSGL*ITNLIR
Trigger: TCGAATTAAATTTGTTATCAAGAGACCAGAGCTGCT...GTGGAGAAGAGCTTTGGGACCCGTTCCTGCCAGCTCTGTAATATACTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS GCA 72 bp CATCTTCTGCTGGCACTTCCACTTCCGTTCCCTCGTTaGCTTCTGAGGAGTGATGGCTTCCTTGCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: HLLLALPLPFPR*LLRSDGFLAKP
Trigger: AGGCTTTGCAAGGAAGCCATCACTCCTCAGAAGGCAACGAGGGAACGGAAGTGGAAGTGCCAGCAGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000082057.10
ENSMUST00000174772.8
CDS CAA 72 bp CCAATAGCTTCACCAAACTTCCGACTGAAGAGGTCGTaGACCTGCTCCCGCAGCTGCCTGGCCTTTTCAACT +
Preference number: 6 (lower is better)
Translates to: PIASPNFRLKRS*TCSRSCLAFST
Trigger: AGTTGAAAAGGCCAGGCAGCTGCGGGAGCAGGTCAACGACCTCTTCAGTCGGAAGTTTGGTGAAGCTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000173888.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS GCA 72 bp AATCTTCTGCTGGCACTTCCACTTCCGTTCCCTCGTTaGCTTCTGAGGAGTGATGGCTTCCTTGCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: NLLLALPLPFPR*LLRSDGFLAKP
Trigger: AGGCTTTGCAAGGAAGCCATCACTCCTCAGAAGGCAACGAGGGAACGGAAGTGGAAGTGCCAGCAGAAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059042.15
ENSMUST00000174155.8
CDS GCA 72 bp TGGCTTCCGTGCTTCCCAAGGCCTCGGCAAATTTCTTaGAGAAGAGCTGGTCAACCATCTTCCTCAGTTTGG +
Preference number: 6 (lower is better)
Translates to: WLPCFPRPRQIS*RRAGQPSSSVW
Trigger: CCAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGCCTTGGGAAGCACGGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174133.5
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS GCA 72 bp CATCTTCTGCTGGCACTTCCACTTCCGTTCCCTCGTTaGCTTCTGAGGAGTGATGGCTTCCAGAATCTTCTG +
Preference number: 6 (lower is better)
Translates to: HLLLALPLPFPR*LLRSDGFQNLL
Trigger: CAGAAGATTCTGGAAGCCATCACTCCTCAGAAGGCAACGAGGGAACGGAAGTGGAAGTGCCAGCAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174133.5
CDS CCA 72 bp CTTCCCAAGGCCTCGGCAAATTTCTTGCAGAAGAGCTaGTCAACCATCTTCCTCAGTTTGGTGATGCGAGCG +
Preference number: 6 (lower is better)
Translates to: LPKASANFLQKS*STIFLSLVMRA
Trigger: CGCTCGCATCACCAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGCCTTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174133.5
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS CAA 72 bp GCCTGCTTAAGGCCAAGCGCTTCCCCGCACTTTTCATaGAAGAGGTTCTCCACTTTCTGCTTCAGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: ACLRPSASPHFS*KRFSTFCFRSV
Trigger: CACAGACCTGAAGCAGAAAGTGGAGAACCTCTTCAATGAAAAGTGCGGGGAAGCGCTTGGCCTTAAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS CAA 72 bp TTGGCTTCCGTGCTTCCCAAGGCCTCGGCAAATTTCTaGCAGAAGAGCTGGTCAACCATCTTCCTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: LASVLPKASANF*QKSWSTIFLSL
Trigger: CAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGAGGCCTTGGGAAGCACGGAAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174133.5
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS CAA 90 bp TCGGCAAATTTCTTGCAGAAGAGCTGGTCAACCATCTTCCTCAGTTaGGTGATGCGAGCGTACCACTCTTCTTTCACTCCTGAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: SANFLQKSWSTIFLS*VMRAYHSSFTPEAG
Trigger: ACCAGCCTCAGGAGTGAAAGAAGAGTGGTACGCTCGCATCACCAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAAATTTGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174133.5
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS TCA 72 bp ACTTCGGGGTCCTCACTGGTTTCTGAAGGGACATGTTaGGTAGAATCTTCTGCTGGCACTTCCACTTCCGTT +
Preference number: 6 (lower is better)
Translates to: TSGSSLVSEGTC*VESSAGTSTSV
Trigger: AACGGAAGTGGAAGTGCCAGCAGAAGATTCTACTCAACATGTCCCTTCAGAAACCAGTGAGGACCCCGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS TCA 72 bp AATGGTCACCTCAACTTCGGGGTCCTCACTGGTTTCTaGAGGGACATGTTGAGTAGAATCTTCTGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: NGHLNFGVLTGF*RDMLSRIFCWH
Trigger: GTGCCAGCAGAAGATTCTACTCAACATGTCCCTTCAGAAACCAGTGAGGACCCCGAAGTTGAGGTGACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059042.15
ENSMUST00000111261.12
ENSMUST00000174155.8
ENSMUST00000174354.8
CDS GCA 72 bp CATCTTCTGCTGGCACTTCCACTTCCGTTCCCTCGTTaGCTTCTGAGGAGTGATGGCTTCCTTGAATGTTAT +
Preference number: 6 (lower is better)
Translates to: HLLLALPLPFPR*LLRSDGFLECY
Trigger: ATAACATTCAAGGAAGCCATCACTCCTCAGAAGGCAACGAGGGAACGGAAGTGGAAGTGCCAGCAGAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173341.9
ENSMUST00000174513.8
CDS CAA 72 bp TTGACCTGCTCCCGCAGCTGCCTGGCCTTTTCAACTTaGGACAGTCGTTCATTATCGTCATCTGGAATTGTC +
Preference number: 6 (lower is better)
Translates to: LTCSRSCLAFST*DSRSLSSSGIV
Trigger: GACAATTCCAGATGACGATAATGAACGACTGTCCAAAGTTGAAAAGGCCAGGCAGCTGCGGGAGCAGGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000173888.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS GCA 72 bp AATCTTCTGCTGGCACTTCCACTTCCGTTCCCTCGTTaGCTTCTGAGGAGTGATGGCTTCCTTGAATGTTAT +
Preference number: 6 (lower is better)
Translates to: NLLLALPLPFPR*LLRSDGFLECY
Trigger: ATAACATTCAAGGAAGCCATCACTCCTCAGAAGGCAACGAGGGAACGGAAGTGGAAGTGCCAGCAGAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111261.12
ENSMUST00000174354.8
CDS CCA 72 bp GACATTCCAATCTTCTTTGACTGGTGTGTTTGTCCGTaGCTGAGTCACTTCAGTTGTGCTGTGAGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: DIPIFFDWCVCP*LSHFSCAVSEQ
Trigger: CTGCTCACTCACAGCACAACTGAAGTGACTCAGCCACGGACAAACACACCAGTCAAAGAAGATTGGAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS CAA 72 bp TTCTTGCAGAAGAGCTGGTCAACCATCTTCCTCAGTTaGGTGATGCGAGCGTACCACTCTTCTTTCACTCCT +
Preference number: 6 (lower is better)
Translates to: FLQKSWSTIFLS*VMRAYHSSFTP
Trigger: AGGAGTGAAAGAAGAGTGGTACGCTCGCATCACCAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174133.5
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS CCA 72 bp GTCTCTTTAATTTCTTCTGTTACTGGGACTTCCAACTaGCTTGCCTCGGCTGATTCTTGTATCACAGGGCCT +
Preference number: 6 (lower is better)
Translates to: VSLISSVTGTSN*LASADSCITGP
Trigger: AGGCCCTGTGATACAAGAATCAGCCGAGGCAAGCCAGTTGGAAGTCCCAGTAACAGAAGAAATTAAAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173888.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8
CDS TCA 72 bp GCTGATTCTTGTATCACAGGGCCTTCAGACTCGTTCTaGTCAACCAGCTGGTTATTAATCACAAGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: ADSCITGPSDSF*STSWLLITSPG
Trigger: TCCAGGACTTGTGATTAATAACCAGCTGGTTGATCAGAACGAGTCTGAAGGCCCTGTGATACAAGAATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000059042.15
ENSMUST00000082057.10
ENSMUST00000111261.12
ENSMUST00000172715.8
ENSMUST00000173341.9
ENSMUST00000173485.8
ENSMUST00000173888.8
ENSMUST00000174155.8
ENSMUST00000174354.8
ENSMUST00000174513.8
ENSMUST00000174772.8