Pregenerated sensors for GTF2H5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034345Ensembl transcript IDs: ENSMUST00000039487.10, ENSMUST00000100955.3
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCCTGTAGAGTTCTCCCCAACCCCACGAGACACTaGGCTGGCCTCTCTCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: VGGSYTHTGQTTACRVLPNPTRH*AGLSQV Trigger: CACTTGAGAGAGGCCAGCTCAGTGTCTCGTGGGGTT...GGGGAGAACTCTACAGGCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCCAGCAACACAGAAACAACATACATAGCATCCCCAGGCTCTCTTCTCTGAACCCCACGAGACACTaGGCTGGCCTCTCTCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: CLQQHRNNIHSIPRLSSLNPTRH*AGLSQV Trigger: CACTTGAGAGAGGCCAGCTCAGTGTCTCGTGGGGTT...CAGAGAAGAGAGCCTGGGGATGCTATGTATGTTGTTTCTGTGTTGCTGGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR-3UTR CCA 90 bp | TCCGTATTTGTGTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCCTGTACACGAGACACTGAGCTaGCCTCTCTCAAGTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SVFVWEGATHTQVRQQPVHETLS*PLSSVC Trigger: ACAGACACTTGAGAGAGGCCAGCTCAGTGTCTCGTG...TACAGGCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCACACAAATACGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCCAGCAACACAGAAACAACATACATAGCATCCCCAGGCTCTCTTCTCTGCCTGCCTCTGCCTTCTaGATGCTGGGATTAATGGTG | + |
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Preference number: 2 (lower is better) Translates to: CLQQHRNNIHSIPRLSSLPASAF*MLGLMV Trigger: CACCATTAATCCCAGCATTCAGAAGGCAGAGGCAGG...CAGAGAAGAGAGCCTGGGGATGCTATGTATGTTGTTTCTGTGTTGCTGGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR-3UTR CCA 90 bp | TCCGTATTTGTGTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCCTGTATCAAGTGTCTGTGGCTaGGATTCCCAAGTGCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: SVFVWEGATHTQVRQQPVSSVCG*DSQVLN Trigger: GTTGAGCACTTGGGAATCCCAGCCACAGACACTTGA...TACAGGCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCACACAAATACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| 3UTR-3UTR CCA 90 bp | TATTTCCGTATTTGTGTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCCCACGAGACACTGAGCTaGCCTCTCTCAAGTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: YFRICVGGSYTHTGQTTAHETLS*PLSSVC Trigger: ACAGACACTTGAGAGAGGCCAGCTCAGTGTCTCGTG...GGCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCACACAAATACGGAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCCAGCAACACAGAAACAACATACATAGCATCCCCAGGCTCTCTTCTCTGTTAGGGGCTTTCATCTaGATGAATGACCCTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: CLQQHRNNIHSIPRLSSLLGAFI*MNDPAA Trigger: GGCTGCAGGGTCATTCATTCAGATGAAAGCCCCTAA...CAGAGAAGAGAGCCTGGGGATGCTATGTATGTTGTTTCTGTGTTGCTGGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR-3UTR CCA 90 bp | ATATTTCCGTATTTGTGTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCTCAAGTGTCTGTGGCTaGGATTCCCAAGTGCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: IFPYLCGRELHTHRSDNSSSVCG*DSQVLN Trigger: GTTGAGCACTTGGGAATCCCAGCCACAGACACTTGA...GCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCACACAAATACGGAAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| 3UTR CAA 90 bp | GCGCTGTCTTCAGTAAGGGGTACCAAGCCCCTCTTACTGTTTCTCTaGCCATTAACAGTGGCTCCGCATGTTTCTAACCTAGTTTACTAC | + |
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Preference number: 2 (lower is better) Translates to: ALSSVRGTKPLLLFL*PLTVAPHVSNLVYY Trigger: GTAGTAAACTAGGTTAGAAACATGCGGAGCCACTGTTAATGGCAAGAGAAACAGTAAGAGGGGCTTGGTACCCCTTACTGAAGACAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR-3UTR TCA 90 bp | ATATTTCCGTATTTGTGTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCTTTCATCTGAATGAATaGCCCTGCAGCCTTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: IFPYLCGRELHTHRSDNSFHLNE*PCSLSH Trigger: GTGGGAAAGGCTGCAGGGTCATTCATTCAGATGAAA...GCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCACACAAATACGGAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTGTATCTTTGAGACAGGGTGTAGTCCTGGCTGTCTTGGAACTCACTCTGTTTCATCTGAATGAATaGCCCTGCAGCCTTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: IVVSLRQGVVLAVLELTLFHLNE*PCSLSH Trigger: GTGGGAAAGGCTGCAGGGTCATTCATTCAGATGAAA...CAGAGTGAGTTCCAAGACAGCCAGGACTACACCCTGTCTCAAAGATACAACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR TCA 72 bp | CAAGGCTGGACTCAAGAGTTGCCTGCCTCTGCCTTCTaGATGCTGGGATTAATGGTGTATACCACCATGCCC | + |
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Preference number: 3 (lower is better) Translates to: QGWTQELPASAF*MLGLMVYTTMP Trigger: GGGCATGGTGGTATACACCATTAATCCCAGCATTCAGAAGGCAGAGGCAGGCAACTCTTGAGTCCAGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR-3UTR CAA 90 bp | ATAGAGACAAGGCTGGACTCAAGAGTTGCCTGCCTCTGCCTTCTGAATGCTGGGCCATGGAGGCTGACCTaGCTGCATTTTTGTTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: IETRLDSRVACLCLLNAGPWRLT*LHFCLN Trigger: GTTCAAACAAAAATGCAGCAAGGTCAGCCTCCATGG...CCCAGCATTCAGAAGGCAGAGGCAGGCAACTCTTGAGTCCAGCCTTGTCTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR TCA 72 bp | GACATGCTCATAACAAGTATAAACCCCACGAGACACTaGGCTGGCCTCTCTCAAGTGTCTGTGGCTGGGATT | + |
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Preference number: 3 (lower is better) Translates to: DMLITSINPTRH*AGLSQVSVAGI Trigger: AATCCCAGCCACAGACACTTGAGAGAGGCCAGCTCAGTGTCTCGTGGGGTTTATACTTGTTATGAGCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| 3UTR TCA 72 bp | CTGTCTTGGAACTCACTCTGTAGACTGGGCTGGACTTaGACTCATGAGTCGGTCTGCCTCTGTTTCTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: LSWNSLCRLGWT*THESVCLCFSS Trigger: ACTAGAGAAACAGAGGCAGACCGACTCATGAGTTCAAGTCCAGCCCAGTCTACAGAGTGAGTTCCAAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR TCA 72 bp | GCAACTTGCAGACCCTGTAACACAGTGCAAGTTAACTaGAGAGGCCTAGCTGCCTCCAGCAACACAGAAACA | + |
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Preference number: 3 (lower is better) Translates to: ATCRPCNTVQVN*RGLAASSNTET Trigger: TGTTTCTGTGTTGCTGGAGGCAGCTAGGCCTCTTCAGTTAACTTGCACTGTGTTACAGGGTCTGCAAGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR GCA 72 bp | CGTGCTATAGAGACAAGGCTGGACTCAAGAGTTGCCTaGCTCTGCCTTCTGAATGCTGGGATTAATGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: RAIETRLDSRVA*LCLLNAGINGV Trigger: TACACCATTAATCCCAGCATTCAGAAGGCAGAGGCAGGCAACTCTTGAGTCCAGCCTTGTCTCTATAGCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR GCA 72 bp | ATAGAGACAAGGCTGGACTCAAGAGTTGCCTGCCTCTaGCTTCTGAATGCTGGGATTAATGGTGTATACCAC | + |
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Preference number: 3 (lower is better) Translates to: IETRLDSRVACL*LLNAGINGVYH Trigger: GTGGTATACACCATTAATCCCAGCATTCAGAAGGCAGAGGCAGGCAACTCTTGAGTCCAGCCTTGTCTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR CCA 72 bp | AGTCCATGGGCAAGAACTATGATGCACATTGAAGTGTaGCAACTTGCAGACCCTGTAACACAGTGCAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: SPWARTMMHIEV*QLADPVTQCKL Trigger: TAACTTGCACTGTGTTACAGGGTCTGCAAGTTGCCACACTTCAATGTGCATCATAGTTCTTGCCCATGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR GCA 72 bp | GTATCTTCCCACCTGTTAGTTACACACATACACTTTTaGTGTACCTTGCACTATCAAGGAGTACCTGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: VSSHLLVTHIHF*CTLHYQGVPAL Trigger: CAAGGCAGGTACTCCTTGATAGTGCAAGGTACAGCAAAAGTGTATGTGTGTAACTAACAGGTGGGAAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| CDS-3UTR CCA 90 bp | GTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCCTGTAGAGTTCTCCCCTCTTCCCCAAGGCGTTaGCCTCATCCAAGTACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VGGSYTHTGQTTACRVLPSSPRR*PHPSTA Trigger: TGCTGTACTTGGATGAGGCCAACGCCTTGGGGAAGA...GGGGAGAACTCTACAGGCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| CDS-3UTR CCA 90 bp | GTGTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCCTGTAGAGTTCTCCTCTTCCCCAAGGCGTTaGCCTCATCCAAGTACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VWEGATHTQVRQQPVEFSSSPRR*PHPSTA Trigger: TGCTGTACTTGGATGAGGCCAACGCCTTGGGGAAGA...GGAGAACTCTACAGGCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| CDS-3UTR GCA 90 bp | GTGTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCCTGTAGAGTTCTCCAAGTACAGCAAGAACTaGTTCATGGCAGGGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: VWEGATHTQVRQQPVEFSKYSKN*FMAGSH Trigger: ATGTGACCCTGCCATGAAGCAGTTCTTGCTGTACTT...GGAGAACTCTACAGGCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| CDS-3UTR GCA 90 bp | TGCCTCCAGCAACACAGAAACAACATACATAGCATCCCCAGGCTCTCTTCTCTGAAGTACAGCAAGAACTaGTTCATGGCAGGGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: CLQQHRNNIHSIPRLSSLKYSKN*FMAGSH Trigger: ATGTGACCCTGCCATGAAGCAGTTCTTGCTGTACTT...CAGAGAAGAGAGCCTGGGGATGCTATGTATGTTGTTTCTGTGTTGCTGGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR CAA 72 bp | TCAGTAAGGGGTACCAAGCCCCTCTTACTGTTTCTCTaGCCATTAACAGTGGCTCCGCATGTTTCTAACCTA | + |
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Preference number: 4 (lower is better) Translates to: SVRGTKPLLLFL*PLTVAPHVSNL Trigger: TAGGTTAGAAACATGCGGAGCCACTGTTAATGGCAAGAGAAACAGTAAGAGGGGCTTGGTACCCCTTACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| 3UTR CAA 72 bp | GGTATCTTCCCACCTGTTAGTTACACACATACACTTTaGCTGTACCTTGCACTATCAAGGAGTACCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GIFPPVSYTHTL*LYLALSRSTCL Trigger: AAGGCAGGTACTCCTTGATAGTGCAAGGTACAGCAAAAGTGTATGTGTGTAACTAACAGGTGGGAAGATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| CDS-3UTR CAA 90 bp | GTGTGGGAGGGAGCTACACACACACAGGTCAGACAACAGCCTGTAGAGTTCTCCTTCTTCCCCAAGGCGTaGGCCTCATCCAAGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: VWEGATHTQVRQQPVEFSFFPKA*ASSKYS Trigger: GCTGTACTTGGATGAGGCCAACGCCTTGGGGAAGAA...GGAGAACTCTACAGGCTGTTGTCTGACCTGTGTGTGTGTAGCTCCCTCCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| CDS-3UTR CAA 90 bp | CTGCAGCCTTTCCCACGACATGCTCATAACAAGTATAAACCCCACGAGACACTGCGCTCCTGGAGGACGTaGACCAGCTCGGCAATGACG | + |
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Preference number: 5 (lower is better) Translates to: LQPFPRHAHNKYKPHETLRSWRT*TSSAMT Trigger: CGTCATTGCCGAGCTGGTCAACGTCCTCCAGGAGCG...CAGTGTCTCGTGGGGTTTATACTTGTTATGAGCATGTCGTGGGAAAGGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| CDS-3UTR CAA 90 bp | ATTGTTGTATCTTTGAGACAGGGTGTAGTCCTGGCTGTCTTGGAACTCACTCTGCGCTCCTGGAGGACGTaGACCAGCTCGGCAATGACG | + |
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Preference number: 5 (lower is better) Translates to: IVVSLRQGVVLAVLELTLRSWRT*TSSAMT Trigger: CGTCATTGCCGAGCTGGTCAACGTCCTCCAGGAGCG...CAGAGTGAGTTCCAAGACAGCCAGGACTACACCCTGTCTCAAAGATACAACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039487.10 |
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| CDS-3UTR CAA 90 bp | CTGCAGCCTTTCCCACGACATGCTCATAACAAGTATAAACCCCACGAGACACTGTTCTTCCCCAAGGCGTaGGCCTCATCCAAGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: LQPFPRHAHNKYKPHETLFFPKA*ASSKYS Trigger: GCTGTACTTGGATGAGGCCAACGCCTTGGGGAAGAA...CAGTGTCTCGTGGGGTTTATACTTGTTATGAGCATGTCGTGGGAAAGGCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| CDS GCA 90 bp | AACTTCTTCCCCAAGGCGTTGGCCTCATCCAAGTACAGCAAGAACTaGTTCATGGCAGGGTCACATTCTATAAGCACCCCTTTCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: NFFPKALASSKYSKN*FMAGSHSISTPFST Trigger: CGTGCTGAAAGGGGTGCTTATAGAATGTGACCCTGCCATGAAGCAGTTCTTGCTGTACTTGGATGAGGCCAACGCCTTGGGGAAGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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| CDS GCA 72 bp | CCCAAGGCGTTGGCCTCATCCAAGTACAGCAAGAACTaGTTCATGGCAGGGTCACATTCTATAAGCACCCCT | + |
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Preference number: 6 (lower is better) Translates to: PKALASSKYSKN*FMAGSHSISTP Trigger: AGGGGTGCTTATAGAATGTGACCCTGCCATGAAGCAGTTCTTGCTGTACTTGGATGAGGCCAACGCCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039487.10 ENSMUST00000100955.3 |
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