Pregenerated sensors for GTF2H3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029387Ensembl transcript IDs: ENSMUST00000031333.4
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGAACAGAGAGTCCCAGGGAGCTGACTGCAGCTCAGTGCGGGGCTaGCGGCCTGGCTCCTGCAAGGCTGGGCTTCAAAACCCAGCACCA | + |
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Preference number: 1 (lower is better) Translates to: LNRESQGADCSSVRG*RPGSCKAGLQNPAP Trigger: TGGTGCTGGGTTTTGAAGCCCAGCCTTGCAGGAGCCAGGCCGGCAGCCCCGCACTGAGCTGCAGTCAGCTCCCTGGGACTCTCTGTTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 90 bp | CCCTGGAAGCACAGGGCAAGAGCAGTGTTTCAAAGAATTCCTCCATaGTCCCTACAGAGTCAGCCTGTGGGACGAGCTGGGGAAGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: PWKHRARAVFQRIPP*SLQSQPVGRAGEAC Trigger: ACAGGCTTCCCCAGCTCGTCCCACAGGCTGACTCTGTAGGGAGCATGGAGGAATTCTTTGAAACACTGCTCTTGCCCTGTGCTTCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 90 bp | GTACACCTGTCCCCCTTCCCAGAGAAATCGGAGGTGTGGGTCCTCTaGAGCTTCACACCCTGGAAGCACAGGGCAAGAGCAGTGTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: VHLSPFPEKSEVWVL*SFTPWKHRARAVFQ Trigger: TTGAAACACTGCTCTTGCCCTGTGCTTCCAGGGTGTGAAGCTGCAGAGGACCCACACCTCCGATTTCTCTGGGAAGGGGGACAGGTGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 90 bp | GATCTGTTGCCACTGCCACCTTCCACTAGGCACAGCAAACTGGTTTaGGCATCCCACTGCCATCTCAGGCCACAGTCATGTGATCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: DLLPLPPSTRHSKLV*ASHCHLRPQSCDQQ Trigger: CTGCTGATCACATGACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCAACAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 90 bp | CTGTGGATCTGTTGCCACTGCCACCTTCCACTAGGCACAGCAAACTaGTTTGGGCATCCCACTGCCATCTCAGGCCACAGTCATGTGATC | + |
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Preference number: 1 (lower is better) Translates to: LWICCHCHLPLGTAN*FGHPTAISGHSHVI Trigger: GATCACATGACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCAACAGATCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 90 bp | GGTCCTCCCCTTCCAAAGAATCCAGTAAAGTGGCTGTGGATCTGTTaGCACTGCCACCTTCCACTAGGCACAGCAAACTGGTTTGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: GPPLPKNPVKWLWIC*HCHLPLGTANWFGH Trigger: ATGCCCAAACCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCAACAGATCCACAGCCACTTTACTGGATTCTTTGGAAGGGGAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR TCA 90 bp | TCTCTGTGCTGTCCTAGGACTTGTACTGTAGACCAGCTCTGGCCTTaGTCTCACAGAGTGCTGGGACTAAAGTTGTGCACCACCACCATC | + |
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Preference number: 1 (lower is better) Translates to: SLCCPRTCTVDQLWP*SHRVLGLKLCTTTI Trigger: GATGGTGGTGGTGCACAACTTTAGTCCCAGCACTCTGTGAGATCAAGGCCAGAGCTGGTCTACAGTACAAGTCCTAGGACAGCACAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 90 bp | TATGTGTATTGTGGTTTATGCATGAATGTCTGGGCACCCTGTTTGTaGTTGGTGCCTGTAGAGGCCAAAAAGGGGGCATCCGATTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: YVYCGLCMNVWAPCL*LVPVEAKKGASDSL Trigger: TAAGGAATCGGATGCCCCCTTTTTGGCCTCTACAGGCACCAAGCACAAACAGGGTGCCCAGACATTCATGCATAAACCACAATACACATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 90 bp | TTTTCATCTTTAGTCTATGTGTATTGTGGTTTATGCATGAATGTCTaGGCACCCTGTTTGTGCTTGGTGCCTGTAGAGGCCAAAAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: FSSLVYVYCGLCMNV*APCLCLVPVEAKKG Trigger: CCCCTTTTTGGCCTCTACAGGCACCAAGCACAAACAGGGTGCCCAGACATTCATGCATAAACCACAATACACATAGACTAAAGATGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR GCA 90 bp | CCGTGCCAGTTAGGGGGATGCAAGCCGAATCAGGTTGGAGTGACCTGGTCCTCCAGCTCAGTGCGGGGCTaGCGGCCTGGCTCCTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: PCQLGGCKPNQVGVTWSSSSVRG*RPGSCK Trigger: CTTGCAGGAGCCAGGCCGGCAGCCCCGCACTGAGCT...GGAGGACCAGGTCACTCCAACCTGATTCGGCTTGCATCCCCCTAACTGGCACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR GCA 90 bp | CCGTGCCAGTTAGGGGGATGCAAGCCGAATCAGGTTGGAGTGACCTGGTCCTCCGAGGTGTGGGTCCTCTaGAGCTTCACACCCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PCQLGGCKPNQVGVTWSSEVWVL*SFTPWK Trigger: CTTCCAGGGTGTGAAGCTGCAGAGGACCCACACCTC...GGAGGACCAGGTCACTCCAACCTGATTCGGCTTGCATCCCCCTAACTGGCACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CAA 90 bp | TGGTCCTCCCCTTCCAAAGAATCCAGTAAAGTGGCTGTGGATCTGTaGCCACTGCCACCTTCCACTAGGCACAGCAAACTGGTTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WSSPSKESSKVAVDL*PLPPSTRHSKLVWA Trigger: TGCCCAAACCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCAACAGATCCACAGCCACTTTACTGGATTCTTTGGAAGGGGAGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR TCA 90 bp | CTTAGAACTGGAGTTACACATAGTTGTGAGCTCATATGTGGGTGCTGGGAATTGAGAGTCCCAGGGAGCTaGCTGCAGCTCAGTGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: LRTGVTHSCELICGCWELRVPGS*LQLSAG Trigger: CCCCGCACTGAGCTGCAGTCAGCTCCCTGGGACTCT...CAATTCCCAGCACCCACATATGAGCTCACAACTATGTGTAACTCCAGTTCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAAACTGGTTTGGGCATCCCACTGCCATCTCAGGCCACAGTCATGTGATCGTGGGTGCTGGGAATTaGACCTGGATCTTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TANWFGHPTAISGHSHVIVGAGN*TWIFWK Trigger: CTTCCAGAAGATCCAGGTTCAATTCCCAGCACCCAC...GATCACATGACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAAACTGGTTTGGGCATCCCACTGCCATCTCAGGCCACAGTCATGTGATCAGGAGCTCATATGTGGGTaGTGGGAATTGAACCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: SKLVWASHCHLRPQSCDQELICG*WELNLD Trigger: ATCCAGGTTCAATTCCCAGCACCCACATATGAGCTC...CTGATCACATGACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CAA 90 bp | GTCTATGTGTATTGTGGTTTATGCATGAATGTCTGGGCACCCTGTTaGTGCTTGGTGCCTGTAGAGGCCAAAAAGGGGGCATCCGATTCC | + |
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Preference number: 2 (lower is better) Translates to: VYVYCGLCMNVWAPC*CLVPVEAKKGASDS Trigger: GGAATCGGATGCCCCCTTTTTGGCCTCTACAGGCACCAAGCACAAACAGGGTGCCCAGACATTCATGCATAAACCACAATACACATAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTATTGTGGTTTATGCATGAATGTCTGGGCACCCTGTTTGTGCTTGGTGCCTGTCTCTGCTCCCTaGGTGCTGAGACTGAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: YVYCGLCMNVWAPCLCLVPVSAP*VLRLKA Trigger: AGCCTTCAGTCTCAGCACTCAGGGAGCAGAGACAGG...CACCAAGCACAAACAGGGTGCCCAGACATTCATGCATAAACCACAATACACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCAGCTCCTTGTATGTAAAAAGGCAGGGACAGTCCCACATAGAATTGAATGACCAGCTCTGGCCTTaGTCTCACAGAGTGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: CLSSLYVKRQGQSHIELNDQLWP*SHRVLG Trigger: TCCCAGCACTCTGTGAGATCAAGGCCAGAGCTGGTC...ATTCAATTCTATGTGGGACTGTCCCTGCCTTTTTACATACAAGGAGCTGAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAAACTGGTTTGGGCATCCCACTGCCATCTCAGGCCACAGTCATGTGATCATTGTGGTTTATGCATaGATGTCTGGGCACCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: TANWFGHPTAISGHSHVIIVVYA*MSGHPV Trigger: AACAGGGTGCCCAGACATTCATGCATAAACCACAAT...GATCACATGACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCAGCTCCTTGTATGTAAAAAGGCAGGGACAGTCCCACATAGAATTGAATTGGGCACCCTGTTTGTaGTTGGTGCCTGTAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: CLSSLYVKRQGQSHIELNWAPCL*LVPVEA Trigger: GGCCTCTACAGGCACCAAGCACAAACAGGGTGCCCA...ATTCAATTCTATGTGGGACTGTCCCTGCCTTTTTACATACAAGGAGCTGAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGACCTGCTGAGCCGTCATGCCAGACTGCTGATTTTCTTTTCATCTTTAGTCCTACCAATCCTGAAGTaGAGAAGACCCAGCATCCGC | + |
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Preference number: 2 (lower is better) Translates to: QDLLSRHARLLIFFSSLVLPILK*RRPSIR Trigger: GCGGATGCTGGGTCTTCTGCACTTCAGGATTGGTAG...GACTAAAGATGAAAAGAAAATCAGCAGTCTGGCATGACGGCTCAGCAGGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAGACAGTGTGGATCCATGTTTAAATAAGGAGATGGGACAGGGTGGTGGTCCACATAGAATTGAATaGAGACAATTCTCGGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: EEDSVDPCLNKEMGQGGGPHRIE*RQFSGP Trigger: AGGGCCCGAGAATTGTCTTCATTCAATTCTATGTGG...ACCACCACCCTGTCCCATCTCCTTATTTAAACATGGATCCACACTGTCTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCAGCTCCTTGTATGTAAAAAGGCAGGGACAGTCCCACATAGAATTGAATTCTAGCAGTGTACCATaGGCAACTAAGATGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CLSSLYVKRQGQSHIELNSSSVP*ATKMLC Trigger: ACAGAGCATCTTAGTTGCTCATGGTACACTGCTAGA...ATTCAATTCTATGTGGGACTGTCCCTGCCTTTTTACATACAAGGAGCTGAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR GCA 90 bp | ACTAAAGTTGTGCACCACCACCATCCCACAGCTCTTAGTAATTTTAAGAAAAACCAAAGAATTCCTCCATaGTCCCTACAGAGTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TKVVHHHHPTALSNFKKNQRIPP*SLQSQP Trigger: AGGCTGACTCTGTAGGGAGCATGGAGGAATTCTTTG...GTTTTTCTTAAAATTACTAAGAGCTGTGGGATGGTGGTGGTGCACAACTTTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | GAGTCCCAGGGAGCTGACTGCAGCTCAGTGCGGGGCTaGCGGCCTGGCTCCTGCAAGGCTGGGCTTCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: ESQGADCSSVRG*RPGSCKAGLQN Trigger: GTTTTGAAGCCCAGCCTTGCAGGAGCCAGGCCGGCAGCCCCGCACTGAGCTGCAGTCAGCTCCCTGGGACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | GAGGATCATCTGAACAGAGAGTCCCAGGGAGCTGACTaGAGCTCAGTGCGGGGCTGCCGGCCTGGCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: EDHLNRESQGAD*SSVRGCRPGSC Trigger: GCAGGAGCCAGGCCGGCAGCCCCGCACTGAGCTGCAGTCAGCTCCCTGGGACTCTCTGTTCAGATGATCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | TCCCCCTTCCCAGAGAAATCGGAGGTGTGGGTCCTCTaGAGCTTCACACCCTGGAAGCACAGGGCAAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SPFPEKSEVWVL*SFTPWKHRARA Trigger: TGCTCTTGCCCTGTGCTTCCAGGGTGTGAAGCTGCAGAGGACCCACACCTCCGATTTCTCTGGGAAGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | ACAGCAGGAAGCCCTGCATGGCCACTGCCACCTTCATaGCCTGCCCTTCTAGGCTCCAGCTCTGGTAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: TAGSPAWPLPPS*PALLGSSSGKS Trigger: AGACTTACCAGAGCTGGAGCCTAGAAGGGCAGGGCATGAAGGTGGCAGTGGCCATGCAGGGCTTCCTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | GTACACCTGTCCCCCTTCCCAGAGAAATCGGAGGTGTaGGTCCTCTGCAGCTTCACACCCTGGAAGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: VHLSPFPEKSEV*VLCSFTPWKHR Trigger: CCTGTGCTTCCAGGGTGTGAAGCTGCAGAGGACCCACACCTCCGATTTCTCTGGGAAGGGGGACAGGTGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | CCACTGCCACCTTCCACTAGGCACAGCAAACTGGTTTaGGCATCCCACTGCCATCTCAGGCCACAGTCATGT | + |
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Preference number: 3 (lower is better) Translates to: PLPPSTRHSKLV*ASHCHLRPQSC Trigger: ACATGACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | TGTTGCCACTGCCACCTTCCACTAGGCACAGCAAACTaGTTTGGGCATCCCACTGCCATCTCAGGCCACAGT | + |
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Preference number: 3 (lower is better) Translates to: CCHCHLPLGTAN*FGHPTAISGHS Trigger: ACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | TCCGTGCCAGTTAGGGGGATGCAAGCCGAATCAGGTTaGAGTGACCTGGTCCTCCCCTTCCAAAGAATCCAG | + |
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Preference number: 3 (lower is better) Translates to: SVPVRGMQAESG*SDLVLPFQRIQ Trigger: CTGGATTCTTTGGAAGGGGAGGACCAGGTCACTCCAACCTGATTCGGCTTGCATCCCCCTAACTGGCACGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR-3UTR CAA 90 bp | TGCCACTGCCACCTTCCACTAGGCACAGCAAACTGGTTTGGGCATCCCACTGCCTGTGGGTGCTGGGAATaGAACCTGGATCTTCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: CHCHLPLGTANWFGHPTACGCWE*NLDLLE Trigger: TTCCAGAAGATCCAGGTTCAATTCCCAGCACCCACA...GGCAGTGGGATGCCCAAACCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | CACAGGGCAAGAGCAGTGTTTCAAAGAATTCCTCCATaGTCCCTACAGAGTCAGCCTGTGGGACGAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: HRARAVFQRIPP*SLQSQPVGRAG Trigger: CCCAGCTCGTCCCACAGGCTGACTCTGTAGGGAGCATGGAGGAATTCTTTGAAACACTGCTCTTGCCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCAAACTCAGAGATACACCTGTCTCTaGTCCCTGAGTGCTGAGACTGAAGGCTTGTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: PGWPQTQRYTCL*SLSAETEGLCL Trigger: AAGGCACAAGCCTTCAGTCTCAGCACTCAGGGAGCAGAGACAGGTGTATCTCTGAGTTTGAGGCCAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | TCCACTAGGCACAGCAAACTGGTTTGGGCATCCCACTaGCATCTCAGGCCACAGTCATGTGATCAGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: STRHSKLVWASH*HLRPQSCDQQW Trigger: CCACTGCTGATCACATGACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCTGTGCCTAGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | ACCCTGGTTGGTTTGAACTCCCTCTGTAGACCAGGCTaGCCTCAAACTCAGAGATACACCTGTCTCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: TLVGLNSLCRPG*PQTQRYTCLCS Trigger: GGAGCAGAGACAGGTGTATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGGGAGTTCAAACCAACCAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | GGTCCTCCCCTTCCAAAGAATCCAGTAAAGTGGCTGTaGATCTGTTGCCACTGCCACCTTCCACTAGGCACA | + |
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Preference number: 3 (lower is better) Translates to: GPPLPKNPVKWL*ICCHCHLPLGT Trigger: TGTGCCTAGTGGAAGGTGGCAGTGGCAACAGATCCACAGCCACTTTACTGGATTCTTTGGAAGGGGAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR TCA 72 bp | GGCCTCAAACTCAGAGATACACCTGTCTCTGCTCCCTaGGTGCTGAGACTGAAGGCTTGTGCCTTTAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: GLKLRDTPVSAP*VLRLKACAFSS Trigger: TGAGCTAAAGGCACAAGCCTTCAGTCTCAGCACTCAGGGAGCAGAGACAGGTGTATCTCTGAGTTTGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | TGTGGTTTATGCATGAATGTCTGGGCACCCTGTTTGTaGTTGGTGCCTGTAGAGGCCAAAAAGGGGGCATCC | + |
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Preference number: 3 (lower is better) Translates to: CGLCMNVWAPCL*LVPVEAKKGAS Trigger: GGATGCCCCCTTTTTGGCCTCTACAGGCACCAAGCACAAACAGGGTGCCCAGACATTCATGCATAAACCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | AAGAATCCAGTAAAGTGGCTGTGGATCTGTTGCCACTaGCACCTTCCACTAGGCACAGCAAACTGGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: KNPVKWLWICCH*HLPLGTANWFG Trigger: CCCAAACCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCAACAGATCCACAGCCACTTTACTGGATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR GCA 72 bp | CTTCCAAAGAATCCAGTAAAGTGGCTGTGGATCTGTTaGCACTGCCACCTTCCACTAGGCACAGCAAACTGG | + |
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Preference number: 3 (lower is better) Translates to: LPKNPVKWLWIC*HCHLPLGTANW Trigger: CCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCAACAGATCCACAGCCACTTTACTGGATTCTTTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | AAATCGGAGGTGTGGGTCCTCTGCAGCTTCACACCCTaGAAGCACAGGGCAAGAGCAGTGTTTCAAAGAATT | + |
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Preference number: 3 (lower is better) Translates to: KSEVWVLCSFTP*KHRARAVFQRI Trigger: AATTCTTTGAAACACTGCTCTTGCCCTGTGCTTCCAGGGTGTGAAGCTGCAGAGGACCCACACCTCCGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR TCA 72 bp | AAAAGCCAGGATCTTCTACACATCCCAGGCAGGATCTaGACCCAAAACTTTCCTGTCTCAGCCTCCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: KSQDLLHIPGRI*TQNFPVSASQV Trigger: AACCTGGGAGGCTGAGACAGGAAAGTTTTGGGTTCAGATCCTGCCTGGGATGTGTAGAAGATCCTGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | AGATGCTCTGTTATGACTGCTGCCGTGACCCAATGCTaGTCATCTTCCCAAATGGCATCCAACTTCACACAC | + |
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Preference number: 3 (lower is better) Translates to: RCSVMTAAVTQC*SSSQMASNFTH Trigger: GTGTGTGAAGTTGGATGCCATTTGGGAAGATGACCAGCATTGGGTCACGGCAGCAGTCATAACAGAGCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR TCA 72 bp | CACATAGTTGTGAGCTCATATGTGGGTGCTGGGAATTaGACCTGGATCTTCTGGAAGAGCAGGGTTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: HIVVSSYVGAGN*TWIFWKSRVSL Trigger: CAGAGAAACCCTGCTCTTCCAGAAGATCCAGGTTCAATTCCCAGCACCCACATATGAGCTCACAACTATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | GGAGTTACACATAGTTGTGAGCTCATATGTGGGTGCTaGGAATTGAACCTGGATCTTCTGGAAGAGCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: GVTHSCELICGC*ELNLDLLEEQG Trigger: ACCCTGCTCTTCCAGAAGATCCAGGTTCAATTCCCAGCACCCACATATGAGCTCACAACTATGTGTAACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CCA 72 bp | TTAGTCTATGTGTATTGTGGTTTATGCATGAATGTCTaGGCACCCTGTTTGTGCTTGGTGCCTGTAGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: LVYVYCGLCMNV*APCLCLVPVEA Trigger: GGCCTCTACAGGCACCAAGCACAAACAGGGTGCCCAGACATTCATGCATAAACCACAATACACATAGACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR TCA 72 bp | TGTAAAAAGGCAGGGACAGTCCCACATAGAATTGAATaGAGACAATTCTCGGGCCCTGAGAATCGTCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: CKKAGTVPHRIE*RQFSGPENRQD Trigger: GTCTTGACGATTCTCAGGGCCCGAGAATTGTCTTCATTCAATTCTATGTGGGACTGTCCCTGCCTTTTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR TCA 90 bp | CCGTGCCAGTTAGGGGGATGCAAGCCGAATCAGGTTGGAGTGACCTGGTCCTCCGCACGCAGGCGTCGATaGGGATATTCTGCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCQLGGCKPNQVGVTWSSARRRR*GYSASE Trigger: CTCAGAAGCAGAATATCCTCATCGACGCCTGCGTGC...GGAGGACCAGGTCACTCCAACCTGATTCGGCTTGCATCCCCCTAACTGGCACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR TCA 90 bp | ACCCTGTTTGTGCTTGGTGCCTGTAGAGGCCAAAAAGGGGGCATCCGATTCCTTCTGCTGGAGGAGCCCTaGATCCGAGTCCAGCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLFVLGACRGQKGGIRFLLLEEP*IRVQHA Trigger: TGCGTGCTGGACTCGGATTCAGGGCTCCTCCAGCAG...AAGGAATCGGATGCCCCCTTTTTGGCCTCTACAGGCACCAAGCACAAACAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR GCA 90 bp | CCGTGCCAGTTAGGGGGATGCAAGCCGAATCAGGTTGGAGTGACCTGGTCCTCCGTTCATGTACTGCAGTaGGCTGTCCTCTGCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCQLGGCKPNQVGVTWSSVHVLQ*AVLCSL Trigger: AAGGCTGCAGAGGACAGCGCACTGCAGTACATGAAC...GGAGGACCAGGTCACTCCAACCTGATTCGGCTTGCATCCCCCTAACTGGCACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR TCA 90 bp | CCGTGCCAGTTAGGGGGATGCAAGCCGAATCAGGTTGGAGTGACCTGGTCCTCCTGTCCTCTGCAGCCTTaGTCACCAAAATCCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PCQLGGCKPNQVGVTWSSCPLQP*SPKSLI Trigger: AATCAAGGATTTTGGTGATCAAGGCTGCAGAGGACA...GGAGGACCAGGTCACTCCAACCTGATTCGGCTTGCATCCCCCTAACTGGCACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CAA 72 bp | GGTTTATGCATGAATGTCTGGGCACCCTGTTTGTGCTaGGTGCCTGTAGAGGCCAAAAAGGGGGCATCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLCMNVWAPCLC*VPVEAKKGASD Trigger: ATCGGATGCCCCCTTTTTGGCCTCTACAGGCACCAAGCACAAACAGGGTGCCCAGACATTCATGCATAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR TCA 90 bp | TTGGTGCCTGTAGAGGCCAAAAAGGGGGCATCCGATTCCTTAGAACTGGAGTTACCGTATGCTGGCCCTTaGTGTCACTCTTGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LVPVEAKKGASDSLELELPYAGP*CHSWSS Trigger: TGATGACCAAGAGTGACATCAAGGGCCAGCATACGG...TAACTCCAGTTCTAAGGAATCGGATGCCCCCTTTTTGGCCTCTACAGGCACCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR TCA 90 bp | CCCCCTTCCCAGAGAAATCGGAGGTGTGGGTCCTCTGCAGCTTCACACCCTGGAGATCACCAAAATCCTTaGTTTCATCTCCTGATTATC | + |
|
Preference number: 4 (lower is better) Translates to: PPSQRNRRCGSSAASHPGDHQNP*FHLLII Trigger: GATAATCAGGAGATGAAATCAAGGATTTTGGTGATC...TCCAGGGTGTGAAGCTGCAGAGGACCCACACCTCCGATTTCTCTGGGAAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR TCA 90 bp | TACCCTACAACAACAAATAAGTACACCTGTCCCCCTTCCCAGAGAAATCGGAGGTCAATGAGACTGCGATaGCAGAAGCAGGCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YPTTTNKYTCPPSQRNRRSMRLR*QKQAAL Trigger: CAGGGCTGCCTGCTTCTGTCATCGCAGTCTCATTGA...CCTCCGATTTCTCTGGGAAGGGGGACAGGTGTACTTATTTGTTGTTGTAGGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CAA 72 bp | CCTTCCAAAGAATCCAGTAAAGTGGCTGTGGATCTGTaGCCACTGCCACCTTCCACTAGGCACAGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSKESSKVAVDL*PLPPSTRHSKL Trigger: CAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCAACAGATCCACAGCCACTTTACTGGATTCTTTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR CCA 90 bp | AGTAAAGTGGCTGTGGATCTGTTGCCACTGCCACCTTCCACTAGGCACAGCAAATCTGTTTCTTCTTCTTaGCCTTCAGCACAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKVAVDLLPLPPSTRHSKSVSSS*PSAQEG Trigger: TCCCTCCTGTGCTGAAGGCCAAGAAGAAGAAACAGA...TTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCAACAGATCCACAGCCACTTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CAA 72 bp | TATTGTGGTTTATGCATGAATGTCTGGGCACCCTGTTaGTGCTTGGTGCCTGTAGAGGCCAAAAAGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YCGLCMNVWAPC*CLVPVEAKKGA Trigger: TGCCCCCTTTTTGGCCTCTACAGGCACCAAGCACAAACAGGGTGCCCAGACATTCATGCATAAACCACAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR TCA 90 bp | CAAGACCTGCTGAGCCGTCATGCCAGACTGCTGATTTTCTTTTCATCTTTAGTCAGGAGAGAAGGCATCTaGGGCACCTTCAGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QDLLSRHARLLIFFSSLVRREGI*GTFRYS Trigger: ACTGTACCTGAAGGTGCCTCAGATGCCTTCTCTCCT...GACTAAAGATGAAAAGAAAATCAGCAGTCTGGCATGACGGCTCAGCAGGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR GCA 90 bp | TTGGTGCCTGTAGAGGCCAAAAAGGGGGCATCCGATTCCTTAGAACTGGAGTTAGATTCCTTTAATGCTTaGTTTCCCCACCAAATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVPVEAKKGASDSLELELDSFNA*FPHQIG Trigger: CCCGATTTGGTGGGGAAAGCAAGCATTAAAGGAATC...TAACTCCAGTTCTAAGGAATCGGATGCCCCCTTTTTGGCCTCTACAGGCACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGCTCCTTGTATGTAAAAAGGCAGGGACAGTCCCACATAGAATTGAATTGTAGCACAGAGCTTTaGCCAGGGATCCTGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLSSLYVKRQGQSHIELNCSTEL*PGILPV Trigger: TACTGGCAGGATCCCTGGCCAAAGCTCTGTGCTACA...ATTCAATTCTATGTGGGACTGTCCCTGCCTTTTTACATACAAGGAGCTGAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR TCA 90 bp | TGCCTCAGCTCCTTGTATGTAAAAAGGCAGGGACAGTCCCACATAGAATTGAATCATAGCCAATCTCAATaGGACTGCGATGACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLSSLYVKRQGQSHIELNHSQSQ*DCDDRS Trigger: GCTTCTGTCATCGCAGTCTCATTGAGATTGGCTATG...ATTCAATTCTATGTGGGACTGTCCCTGCCTTTTTACATACAAGGAGCTGAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR GCA 90 bp | TATCCTGAAGAAGACAGTGTGGATCCATGTTTAAATAAGGAGATGGGACAGGGTAGTAGTGTCTCCGTATaGTGGCCCTTGATGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: YPEEDSVDPCLNKEMGQGSSVSV*WPLMSL Trigger: GAGTGACATCAAGGGCCAGCATACGGAGACACTACT...ACCCTGTCCCATCTCCTTATTTAAACATGGATCCACACTGTCTTCTTCAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR GCA 90 bp | AGCAAACTGGTTTGGGCATCCCACTGCCATCTCAGGCCACAGTCATGTGATCAGCTGATTATCTTTAACTaGCTTGTTCACTCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLVWASHCHLRPQSCDQLIIFN*LVHSVN Trigger: ATTCACAGAGTGAACAAGGCAGTTAAAGATAATCAG...CTGATCACATGACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| 3UTR CAA 72 bp | TTGTATGTAAAAAGGCAGGGACAGTCCCACATAGAATaGAATGAAGACAATTCTCGGGCCCTGAGAATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYVKRQGQSHIE*NEDNSRALRIV Trigger: GACGATTCTCAGGGCCCGAGAATTGTCTTCATTCAATTCTATGTGGGACTGTCCCTGCCTTTTTACATACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR TCA 90 bp | TGCCTCAGCTCCTTGTATGTAAAAAGGCAGGGACAGTCCCACATAGAATTGAATCTTGATTTCATCTCCTaGTTATCTTTAACTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSSLYVKRQGQSHIELNLDFIS*LSLTAL Trigger: CAAGGCAGTTAAAGATAATCAGGAGATGAAATCAAG...ATTCAATTCTATGTGGGACTGTCCCTGCCTTTTTACATACAAGGAGCTGAGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS TCA 90 bp | GCAGGAGAGAAGGCATCTGAGGCACCTTCAGGTACAGTCCCCCAGTaGTGTCACAAGCCTGCTGGAGGAGCCCTGAATCCGAGTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGEKASEAPSGTVPQ*CHKPAGGALNPSPA Trigger: TGCTGGACTCGGATTCAGGGCTCCTCCAGCAGGCTTGTGACATCACTGGGGGACTGTACCTGAAGGTGCCTCAGATGCCTTCTCTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR CAA 90 bp | TACCCTACAACAACAAATAAGTACACCTGTCCCCCTTCCCAGAGAAATCGGAGGCAGTCGGGGAGCGCATaGCCAGGGTCTCCGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YPTTTNKYTCPPSQRNRRQSGSA*PGSPKK Trigger: CTTCTTCGGAGACCCTGGCAATGCGCTCCCCGACTG...CCTCCGATTTCTCTGGGAAGGGGGACAGGTGTACTTATTTGTTGTTGTAGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR CAA 90 bp | TGCCACTGCCACCTTCCACTAGGCACAGCAAACTGGTTTGGGCATCCCACTGCCCTGTCCTCTGCAGCCTaGATCACCAAAATCCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CHCHLPLGTANWFGHPTALSSAA*ITKILD Trigger: ATCAAGGATTTTGGTGATCAAGGCTGCAGAGGACAG...GGCAGTGGGATGCCCAAACCAGTTTGCTGTGCCTAGTGGAAGGTGGCAGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR CAA 90 bp | CCGTGCCAGTTAGGGGGATGCAAGCCGAATCAGGTTGGAGTGACCTGGTCCTCCCAGATGGGGCTGAAATaGCAGAAAATAGACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: PCQLGGCKPNQVGVTWSSQMGLK*QKIDRH Trigger: GTGTCTGTCTATTTTCTGCAATTTCAGCCCCATCTG...GGAGGACCAGGTCACTCCAACCTGATTCGGCTTGCATCCCCCTAACTGGCACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS CCA 90 bp | CACAGAGCTTTGGCCAGGGATCCTGCCAGTAGTGTCTCCGTATGCTaGCCCTTGATGTCACTCTTGGTCATCAGATCCTTGATCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRALARDPASSVSVC*PLMSLLVIRSLISS Trigger: TGAGGAGATCAAGGATCTGATGACCAAGAGTGACATCAAGGGCCAGCATACGGAGACACTACTGGCAGGATCCCTGGCCAAAGCTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS-3UTR CAA 90 bp | AGCAAACTGGTTTGGGCATCCCACTGCCATCTCAGGCCACAGTCATGTGATCAGCCCCACCAAATCGGGTaGGTGTCAACTATGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: SKLVWASHCHLRPQSCDQPHQIG*VSTMIT Trigger: GGTGATCATAGTTGACACCAACCCGATTTGGTGGGG...CTGATCACATGACTGTGGCCTGAGATGGCAGTGGGATGCCCAAACCAGTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS GCA 90 bp | ACTCTTGGTCATCAGATCCTTGATCTCCTCAGCGATCACCTCGTTTaGAACTGTCAACAGCTCGTATTTCCCATCTTTACTCCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLGHQILDLLSDHLV*NCQQLVFPIFTPRG Trigger: CCCTCTGGGAGTAAAGATGGGAAATACGAGCTGTTGACAGTTGCAAACGAGGTGATCGCTGAGGAGATCAAGGATCTGATGACCAAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS TCA 90 bp | GTACTGCAGTGCGCTGTCCTCTGCAGCCTTGATCACCAAAATCCTTaGTTTCATCTCCTGATTATCTTTAACTGCCTTGTTCACTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLQCAVLCSLDHQNP*FHLLIIFNCLVHSV Trigger: CACAGAGTGAACAAGGCAGTTAAAGATAATCAGGAGATGAAATCAAGGATTTTGGTGATCAAGGCTGCAGAGGACAGCGCACTGCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS TCA 72 bp | TCCCCCAGTGATGTCACAAGCCTGCTGGAGGAGCCCTaGATCCGAGTCCAGCACGCAGGCGTCGATGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SPSDVTSLLEEP*IRVQHAGVDED Trigger: ATCCTCATCGACGCCTGCGTGCTGGACTCGGATTCAGGGCTCCTCCAGCAGGCTTGTGACATCACTGGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS GCA 72 bp | ACCTTCAGGTACAGTCCCCCAGTGATGTCACAAGCCTaGTGGAGGAGCCCTGAATCCGAGTCCAGCACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TFRYSPPVMSQA*WRSPESESSTQ Trigger: CTGCGTGCTGGACTCGGATTCAGGGCTCCTCCAGCAGGCTTGTGACATCACTGGGGGACTGTACCTGAAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS GCA 72 bp | CTTTACTCCCAGAGGGGTTACAGTCGGGGAGCGCATTaGCAGGGTCTCCGAAGAAGTCTCCAAGTCCACCGT | + |
|
Preference number: 6 (lower is better) Translates to: LYSQRGYSRGAH*QGLRRSLQVHR Trigger: ACGGTGGACTTGGAGACTTCTTCGGAGACCCTGGCAATGCGCTCCCCGACTGTAACCCCTCTGGGAGTAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS CAA 90 bp | GCTTTGGCCAGGGATCCTGCCAGTAGTGTCTCCGTATGCTGGCCCTaGATGTCACTCTTGGTCATCAGATCCTTGATCTCCTCAGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: ALARDPASSVSVCWP*MSLLVIRSLISSAI Trigger: GATCGCTGAGGAGATCAAGGATCTGATGACCAAGAGTGACATCAAGGGCCAGCATACGGAGACACTACTGGCAGGATCCCTGGCCAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS TCA 72 bp | ATGACAGCCAGCTGGTTGGAGCGGTTCATGAACAGGTaGGAATTCGCCAGCACCATCACTGCATCCATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: MTASWLERFMNR*EFASTITASMH Trigger: ATGCATGGATGCAGTGATGGTGCTGGCGAATTCTCACCTGTTCATGAACCGCTCCAACCAGCTGGCTGTCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS CAA 90 bp | GTCTCCGTATGCTGGCCCTTGATGTCACTCTTGGTCATCAGATCCTaGATCTCCTCAGCGATCACCTCGTTTGCAACTGTCAACAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VSVCWPLMSLLVIRS*ISSAITSFATVNSS Trigger: CGAGCTGTTGACAGTTGCAAACGAGGTGATCGCTGAGGAGATCAAGGATCTGATGACCAAGAGTGACATCAAGGGCCAGCATACGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS CAA 90 bp | GATCCTGCCAGTAGTGTCTCCGTATGCTGGCCCTTGATGTCACTCTaGGTCATCAGATCCTTGATCTCCTCAGCGATCACCTCGTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DPASSVSVCWPLMSL*VIRSLISSAITSFA Trigger: TGCAAACGAGGTGATCGCTGAGGAGATCAAGGATCTGATGACCAAGAGTGACATCAAGGGCCAGCATACGGAGACACTACTGGCAGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS CAA 72 bp | TGCTGGCCCTTGATGTCACTCTTGGTCATCAGATCCTaGATCTCCTCAGCGATCACCTCGTTTGCAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CWPLMSLLVIRS*ISSAITSFATV Trigger: GACAGTTGCAAACGAGGTGATCGCTGAGGAGATCAAGGATCTGATGACCAAGAGTGACATCAAGGGCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS TCA 72 bp | CTTGCTTTCCCCACCAAATCGGGTTGGTGTCAACTATaGTCACCAGAAGGTTCAACTCATCTTCGTCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LAFPTKSGWCQL*SPEGSTHLRQR Trigger: CCGCTGACGAAGATGAGTTGAACCTTCTGGTGATCATAGTTGACACCAACCCGATTTGGTGGGGAAAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS GCA 72 bp | AGCAAAGATGACGTTCATGAAGTTCATGTACTGCAGTaGGCTGTCCTCTGCAGCCTTGATCACCAAAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SKDDVHEVHVLQ*AVLCSLDHQNP Trigger: AGGATTTTGGTGATCAAGGCTGCAGAGGACAGCGCACTGCAGTACATGAACTTCATGAACGTCATCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS GCA 72 bp | CATCAGATCCTTGATCTCCTCAGCGATCACCTCGTTTaGAACTGTCAACAGCTCGTATTTCCCATCTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: HQILDLLSDHLV*NCQQLVFPIFT Trigger: AGTAAAGATGGGAAATACGAGCTGTTGACAGTTGCAAACGAGGTGATCGCTGAGGAGATCAAGGATCTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS TCA 72 bp | AGTTCATGTACTGCAGTGCGCTGTCCTCTGCAGCCTTaGTCACCAAAATCCTTGATTTCATCTCCTGATTAT | + |
|
Preference number: 6 (lower is better) Translates to: SSCTAVRCPLQP*SPKSLISSPDY Trigger: ATAATCAGGAGATGAAATCAAGGATTTTGGTGATCAAGGCTGCAGAGGACAGCGCACTGCAGTACATGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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| CDS TCA 72 bp | TGCGCTGTCCTCTGCAGCCTTGATCACCAAAATCCTTaGTTTCATCTCCTGATTATCTTTAACTGCCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CAVLCSLDHQNP*FHLLIIFNCLV Trigger: AACAAGGCAGTTAAAGATAATCAGGAGATGAAATCAAGGATTTTGGTGATCAAGGCTGCAGAGGACAGCGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031333.4 |
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