Pregenerated sensors for GTF2H1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006599Ensembl transcript IDs: ENSMUST00000006774.11, ENSMUST00000107644.2, ENSMUST00000165031.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTaGAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: MCKYNSISSGSRRAC*RCFPRCEHLLVFSQ Trigger: CTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| 3UTR TCA 90 bp | CCCAAGAAACCCATGCAGCATCAGTCTCCTGACGACGTCCTGCACTaGCCACGACTCCCGCACATGTGCCTTCTACTTGGGGACTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: PKKPMQHQSPDDVLH*PRLPHMCLLLGDSE Trigger: TTCTGAGTCCCCAAGTAGAAGGCACATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAGGAGACTGATGCTGCATGGGTTTCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| 3UTR GCA 90 bp | TTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTaGTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: FMCKYNSISSGSRRA*CRCFPRCEHLLVFS Trigger: GCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| 3UTR GCA 90 bp | TTGCACCCAAGAAACCCATGCAGCATCAGTCTCCTGACGACGTCCTaGACTGACCACGACTCCCGCACATGTGCCTTCTACTTGGGGACT | + |
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Preference number: 1 (lower is better) Translates to: LHPRNPCSISLLTTS*TDHDSRTCAFYLGT Trigger: AGTCCCCAAGTAGAAGGCACATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAGGAGACTGATGCTGCATGGGTTTCTTGGGTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| 3UTR TCA 90 bp | GCAATATACATTTGCACCCAAGAAACCCATGCAGCATCAGTCTCCTaGCGACGTCCTGCACTGACCACGACTCCCGCACATGTGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: AIYICTQETHAASVS*RRPALTTTPAHVPS Trigger: AGAAGGCACATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAGGAGACTGATGCTGCATGGGTTTCTTGGGTGCAAATGTATATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGACGACGTCCTGCACTGACCACGACTCCCGCACATGTGCCTTCTACTTGCTGTTTCCTGATGGCTaGGCAACAGCATCCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LLTTSCTDHDSRTCAFYLLFPDG*ATASLC Trigger: GCAGAGGGATGCTGTTGCTCAGCCATCAGGAAACAG...CAAGTAGAAGGCACATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| 3UTR-3UTR GCA 90 bp | CATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGCCCGGTGTGAGCATCTaGTTGTCTTCAGCCAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: HVQVQQHQLWESAGVLQMPGVSI*LSSARF Trigger: AAACCTGGCTGAAGACAAGCAGATGCTCACACCGGG...CATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| 3UTR-3UTR GCA 90 bp | AACACAGGCTTCAGTGCCACACTTATTTCCGTAGGAAACACAGGACTAGTGGAGGTTTCAGTTTTCATGTaGAAGTACAACAGCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: NTGFSATLISVGNTGLVEVSVFM*KYNSIS Trigger: GCTGATGCTGTTGTACTTGCACATGAAAACTGAAAC...CTCCACTAGTCCTGTGTTTCCTACGGAAATAAGTGTGGCACTGAAGCCTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| 3UTR TCA 72 bp | CCCATGCAGCATCAGTCTCCTGACGACGTCCTGCACTaGCCACGACTCCCGCACATGTGCCTTCTACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: PMQHQSPDDVLH*PRLPHMCLLLG Trigger: CCCAAGTAGAAGGCACATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAGGAGACTGATGCTGCATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| 3UTR GCA 72 bp | AAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTaGTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: KYNSISSGSRRA*CRCFPRCEHLL Trigger: AAGCAGATGCTCACACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| 3UTR TCA 72 bp | ATTTGCACCCAAGAAACCCATGCAGCATCAGTCTCCTaGCGACGTCCTGCACTGACCACGACTCCCGCACAT | + |
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Preference number: 3 (lower is better) Translates to: ICTQETHAASVS*RRPALTTTPAH Trigger: ATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAGGAGACTGATGCTGCATGGGTTTCTTGGGTGCAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| 3UTR CCA 72 bp | TTCAGTTTTCATGTGCAAGTACAACAGCATCAGCTCTaGGAGTCGGCGGGCGTGCTGCAGATGTTTCCCCCG | + |
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Preference number: 3 (lower is better) Translates to: FSFHVQVQQHQL*ESAGVLQMFPP Trigger: CGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAAAACTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| 3UTR TCA 72 bp | TTTGGTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTaGATCCCGTCCCTTCCTTCTGTTTCAGTTTTCATG | + |
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Preference number: 3 (lower is better) Translates to: FGSALVSLPRVR*IPSLPSVSVFM Trigger: CATGAAAACTGAAACAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGGAAACCAAGGCAGAACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| 3UTR GCA 72 bp | TGCCTTCTACTTGGGGACTCAGAACACAGGCTTCAGTaGCACACTTATTTCCGTAGGAAACACAGGACTAGT | + |
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Preference number: 3 (lower is better) Translates to: CLLLGDSEHRLQ*HTYFRRKHRTS Trigger: ACTAGTCCTGTGTTTCCTACGGAAATAAGTGTGGCACTGAAGCCTGTGTTCTGAGTCCCCAAGTAGAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| CDS-3UTR TCA 90 bp | ACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTCCCCCGGTTTGGGCAGCAGCTGCTaGAGGAGGTCCTTCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: TTASALGVGGRAADVSPGLGSSC*RRSFTA Trigger: TGCAGTGAAGGACCTCCTTCAGCAGCTGCTGCCCAA...ACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | ACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTCCCCCGGTGTGCTTGTTGTTTCCTaGGACCAGCAGCCAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: TTASALGVGGRAADVSPGVLVVS*DQQPGP Trigger: TGGTCCTGGCTGCTGGTCTCAGGAAACAACAAGCAC...ACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | ACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTCCCCCGGTGTGAATTCCCATCCACGCTaGTGGGCTCACCATTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: TASALGVGGRAADVSPGVNSHPR*WAHHSV Trigger: GACAGAATGGTGAGCCCAGCAGCGTGGATGGGAATT...CACACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | ACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTCCCCCGGTTGCTGTGTCCCTCCCTaGATAAGAGCTCCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TTASALGVGGRAADVSPGCCVPP*IRAPPG Trigger: ACCTGGAGGAGCTCTTATGCAGGGAGGGACACAGCA...ACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | ACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTCCCCCGGTGTGCTTTTGACTGCTGGCTaGAAGCAGTCTGTATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TASALGVGGRAADVSPGVLLTAG*KQSVSP Trigger: TGGGGATACAGACTGCTTTCAGCCAGCAGTCAAAAG...CACACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | ACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTCCCCCGGTGTGTGTTGCATACTGCAGTaGCTGAATTGGAGTAGGACC | + |
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Preference number: 4 (lower is better) Translates to: TASALGVGGRAADVSPGVCCILQ*LNWSRT Trigger: GGTCCTACTCCAATTCAGTCACTGCAGTATGCAACA...CACACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | GGGCGTGCTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGGTTTGTTGTGTCCCCTaGATGCAGGACCAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GRAADVSPGVSICLSSARVCCVP*MQDQLK Trigger: CTTCAGCTGGTCCTGCATGCAGGGGACACAACAAAC...CCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGCACGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | GGGCGTGCTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGCTTTTGACTGCTGGCTaGAAGCAGTCTGTATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRAADVSPGVSICLSSARLLTAG*KQSVSP Trigger: TGGGGATACAGACTGCTTTCAGCCAGCAGTCAAAAG...CCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGCACGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | GCTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAAAGAGCTCCTCCAGGTaGCAGGGCTGTGATGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: AADVSPGVSICLSSARFPKSSSR*QGCDGA Trigger: AGCACCATCACAGCCCTGTCACCTGGAGGAGCTCTT...TGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | AGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGAGTGTTGGGCAGCAGCTGCTaGAGGAGGTCCTTCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: RCFPRCEHLLVFSQVSRVLGSSC*RRSFTA Trigger: TGCAGTGAAGGACCTCCTTCAGCAGCTGCTGCCCAA...CACTCTGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | TTGGTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTGTGCTTGTTGTTTCCTaGGACCAGCAGCCAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LVLPWFPSPELGESRPFLVLVVS*DQQPGP Trigger: TGGTCCTGGCTGCTGGTCTCAGGAAACAACAAGCAC...AAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGGAAACCAAGGCAGAACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | CATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTGTTGCATACTGCAGTaGCTGAATTGGAGTAGGACC | + |
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Preference number: 4 (lower is better) Translates to: HVQVQQHQLWESAGVLQMCCILQ*LNWSRT Trigger: GGTCCTACTCCAATTCAGTCACTGCAGTATGCAACA...CATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | ATACATTTGCACCCAAGAAACCCATGCAGCATCAGTCTCCTGACGACGTCCTGCAAGAGCTCCTCCAGGTaGCAGGGCTGTGATGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: IHLHPRNPCSISLLTTSCKSSSR*QGCDGA Trigger: AGCACCATCACAGCCCTGTCACCTGGAGGAGCTCTT...GCAGGACGTCGTCAGGAGACTGATGCTGCATGGGTTTCTTGGGTGCAAATGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| CDS-3UTR GCA 90 bp | AGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGAGTGTGCTGTGTCCCTCCCTaGATAAGAGCTCCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RCFPRCEHLLVFSQVSRVCCVPP*IRAPPG Trigger: ACCTGGAGGAGCTCTTATGCAGGGAGGGACACAGCA...CACTCTGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | AGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGAGTGGTTTGTTGTGTCCCCTaGATGCAGGACCAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RCFPRCEHLLVFSQVSRVVCCVP*MQDQLK Trigger: CTTCAGCTGGTCCTGCATGCAGGGGACACAACAAAC...CACTCTGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | AGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGAGTGAATTCCCATCCACGCTaGTGGGCTCACCATTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RCFPRCEHLLVFSQVSRVNSHPR*WAHHSV Trigger: GACAGAATGGTGAGCCCAGCAGCGTGGATGGGAATT...CACTCTGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | ACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTCCCCCGGTGACTTACCAGATTTGTaGTTAAATACTGCCTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: TTASALGVGGRAADVSPGDLPDL*LNTASE Trigger: TTCGGAGGCAGTATTTAAGCACAAATCTGGTAAGTC...ACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | TTGGTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCAATTCTCTCTGCCATaGGGTACAGTGCTCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: LVLPWFPSPELGESRPFLQFSLP*GTVLHP Trigger: AGGATGGAGCACTGTACCTCATGGCAGAGAGAATTG...AAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGGAAACCAAGGCAGAACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | AGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGAGTGCAATTCTCTCTGCCATaGGGTACAGTGCTCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: RCFPRCEHLLVFSQVSRVQFSLP*GTVLHP Trigger: AGGATGGAGCACTGTACCTCATGGCAGAGAGAATTG...CACTCTGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | ACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTCCCCCGGTGTGCTGGCATTTAATATCTaGATACATATGGCTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: TASALGVGGRAADVSPGVLAFNI*IHMADC Trigger: ACAATCAGCCATATGTATGCAGATATTAAATGCCAG...CACACCGGGGGAAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | CATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGGACATCAGCCAGAAATaGTGCAGAAATACCAACATC | + |
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Preference number: 4 (lower is better) Translates to: HVQVQQHQLWESAGVLQMDISQK*CRNTNI Trigger: GATGTTGGTATTTCTGCAGCATTTCTGGCTGATGTC...CATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | GTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGCCAACATCCTGCTTGTaGCTGGATGTAGAACTATCT | + |
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Preference number: 4 (lower is better) Translates to: VLPWFPSPELGESRPFLLPTSCL*LDVELS Trigger: AGATAGTTCTACATCCAGTCACAAGCAGGATGTTGG...CAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGGAAACCAAGGCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | GTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTATGGTAATACCTGTCTaGCTTCTTGAGATTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: VQVQQHQLWESAGVLQMFMVIPV*LLEIQC Trigger: GCACTGAATCTCAAGAAGTCAGACAGGTATTACCAT...AAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | CTCCTGACGACGTCCTGCACTGACCACGACTCCCGCACATGTGCCTTCTACTTGGAGTTAATAATGTCCTaGCTTGTTGCATACTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLTTSCTDHDSRTCAFYLELIMS*LVAYCS Trigger: ACTGCAGTATGCAACAAGTCAGGACATTATTAACTC...CAAGTAGAAGGCACATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| CDS-3UTR GCA 90 bp | GTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGATCCCGTTCTTTCACTaGCGTGCTTTCGTTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: VLPWFPSPELGESRPFLLIPFFH*RAFVGK Trigger: TTTTCCAACGAAAGCACGGCAGTGAAAGAACGGGAT...CAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGGAAACCAAGGCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CCA 90 bp | CATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGCTTTCGTTGGAAAAATaGAAGTTTGTTGTGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: HVQVQQHQLWESAGVLQMLSLEK*KFVVSP Trigger: AGGGGACACAACAAACTTCCATTTTTCCAACGAAAG...CATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | TTTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGGAGTTAATAATGTCCTaGCTTGTTGCATACTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: FHVQVQQHQLWESAGVLQELIMS*LVAYCS Trigger: ACTGCAGTATGCAACAAGTCAGGACATTATTAACTC...CTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | GCTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGTTCTTTCACTGCCGTaGTTTCGTTGGAAAAATGGA | + |
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Preference number: 4 (lower is better) Translates to: AADVSPGVSICLSSARFPVLSLP*FRWKNG Trigger: TCCATTTTTCCAACGAAAGCACGGCAGTGAAAGAAC...TGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | TTGGTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTATCCCGTTCTTTCACTaGCGTGCTTTCGTTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LVLPWFPSPELGESRPFLIPFFH*RAFVGK Trigger: TTTTCCAACGAAAGCACGGCAGTGAAAGAACGGGAT...AAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGGAAACCAAGGCAGAACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CCA 90 bp | TTTTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCACTGCCGTGCTTTCGTTaGAAAAATGGAAGTTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: FSCASTTASALGVGGRAALPCFR*KNGSLL Trigger: CAACAAACTTCCATTTTTCCAACGAAAGCACGGCAG...TGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CCA 90 bp | TTGGTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTAGACTGAATATCGTTTaGCACCATCTGGTTTACGGC | + |
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Preference number: 4 (lower is better) Translates to: LVLPWFPSPELGESRPFLRLNIV*HHLVYG Trigger: GCCGTAAACCAGATGGTGCCAAACGATATTCAGTCT...AAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGGAAACCAAGGCAGAACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR TCA 90 bp | AGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGAGTGATGGTAATACCTGTCTaGCTTCTTGAGATTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: RCFPRCEHLLVFSQVSRVMVIPV*LLEIQC Trigger: GCACTGAATCTCAAGAAGTCAGACAGGTATTACCAT...CACTCTGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CCA 90 bp | TTTTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCACTTTCGTTGGAAAAATaGAAGTTTGTTGTGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: FSCASTTASALGVGGRAALSLEK*KFVVSP Trigger: AGGGGACACAACAAACTTCCATTTTTCCAACGAAAG...TGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CCA 90 bp | ATACATTTGCACCCAAGAAACCCATGCAGCATCAGTCTCCTGACGACGTCCTGCCTGCCGTGCTTTCGTTaGAAAAATGGAAGTTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: IHLHPRNPCSISLLTTSCLPCFR*KNGSLL Trigger: CAACAAACTTCCATTTTTCCAACGAAAGCACGGCAG...GCAGGACGTCGTCAGGAGACTGATGCTGCATGGGTTTCTTGGGTGCAAATGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCACTGGCATTTAATATCTaGATACATATGGCTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: FSCASTTASALGVGGRAALAFNI*IHMADC Trigger: ACAATCAGCCATATGTATGCAGATATTAAATGCCAG...TGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGTTTCAGTTTTCATGTGACATCAGCCAGAAATaGTGCAGAAATACCAACATC | + |
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Preference number: 4 (lower is better) Translates to: PSPELGESRPFLLFQFSCDISQK*CRNTNI Trigger: GATGTTGGTATTTCTGCAGCATTTCTGGCTGATGTC...ACATGAAAACTGAAACAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCACTTCTTGAGATTCAGTaGAATCGTTTTCACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: FSCASTTASALGVGGRAALLEIQ*NRFHRI Trigger: AATTCTGTGAAAACGATTGCACTGAATCTCAAGAAG...TGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR GCA 90 bp | AACACAGGCTTCAGTGCCACACTTATTTCCGTAGGAAACACAGGACTAGTGGAGGACTTACCAGATTTGTaGTTAAATACTGCCTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: NTGFSATLISVGNTGLVEDLPDL*LNTASE Trigger: TTCGGAGGCAGTATTTAAGCACAAATCTGGTAAGTC...CTCCACTAGTCCTGTGTTTCCTACGGAAATAAGTGTGGCACTGAAGCCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGTTTCAGTTTTCATGTCTTCTTGAGATTCAGTaGAATCGTTTTCACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: PSPELGESRPFLLFQFSCLLEIQ*NRFHRI Trigger: AATTCTGTGAAAACGATTGCACTGAATCTCAAGAAG...ACATGAAAACTGAAACAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | GGGCGTGCTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGCATCAGGCGCCGGGATaGCCACGCGTGGAGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: GRAADVSPGVSICLSSARHQAPG*PRVELV Trigger: AACAAGCTCCACGCGTGGCAATCCCGGCGCCTGATG...CCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGCACGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | GTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGCATCAGGCGCCGGGATaGCCACGCGTGGAGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: VLPWFPSPELGESRPFLLHQAPG*PRVELV Trigger: AACAAGCTCCACGCGTGGCAATCCCGGCGCCTGATG...CAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGGAAACCAAGGCAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | GGGCGTGCTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTATTAGCTTTCCGCTaGAACTTGGGCAGCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GRAADVSPGVSICLSSARLLAFR*NLGSSC Trigger: GCAGCTGCTGCCCAAGTTCAAGCGGAAAGCTAATAA...CCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGCACGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | CATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTGGAAAAATGGAAGTTaGTTGTGTCCCCTGCATGCA | + |
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Preference number: 5 (lower is better) Translates to: HVQVQQHQLWESAGVLQMWKNGS*LCPLHA Trigger: TGCATGCAGGGGACACAACAAACTTCCATTTTTCCA...CATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | TTTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGCTGTCCATTTTGTGCTaGTTGTTTCCTGAGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: FHVQVQQHQLWESAGVLQLSILC*LFPETS Trigger: GCTGGTCTCAGGAAACAACAAGCACAAAATGGACAG...CTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | GTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTCAGGACCAGCTGAAGTaGTATTTTAGCTTTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: VQVQQHQLWESAGVLQMFQDQLK*YFSFSL Trigger: GAGGGAAAAGCTAAAATACAACTTCAGCTGGTCCTG...AAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | TTTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGCAGGACCAGCTGAAGTaGTATTTTAGCTTTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: FHVQVQQHQLWESAGVLQQDQLK*YFSFSL Trigger: GAGGGAAAAGCTAAAATACAACTTCAGCTGGTCCTG...CTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | CTCCTGACGACGTCCTGCACTGACCACGACTCCCGCACATGTGCCTTCTACTTGTCCTTTTCTGTCATGTaGTGTGGTACAGTTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LLTTSCTDHDSRTCAFYLSFSVM*CGTVSA Trigger: TGCAGAAACTGTACCACACAACATGACAGAAAAGGA...CAAGTAGAAGGCACATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| CDS-3UTR CAA 90 bp | GGATCCCAGTGTGGGTCTGAGGAAGGATTCTTAGGGCTACCCTGTGCCACAAACCAGACTGAATATCGTTaGGCACCATCTGGTTTACGG | + |
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Preference number: 5 (lower is better) Translates to: GSQCGSEEGFLGLPCATNQTEYR*APSGLR Trigger: CCGTAAACCAGATGGTGCCAAACGATATTCAGTCTG...GTTTGTGGCACAGGGTAGCCCTAAGAATCCTTCCTCAGACCCACACTGGGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| CDS-3UTR CAA 90 bp | TTTTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAAAAAATGGAAGTTTGTaGTGTCCCCTGCATGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: FSCASTTASALGVGGRAAKNGSL*CPLHAG Trigger: TCCTGCATGCAGGGGACACAACAAACTTCCATTTTT...TGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCACATGAAAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | ATACATTTGCACCCAAGAAACCCATGCAGCATCAGTCTCCTGACGACGTCCTGCTTATTAGCTTTCCGCTaGAACTTGGGCAGCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: IHLHPRNPCSISLLTTSCLLAFR*NLGSSC Trigger: GCAGCTGCTGCCCAAGTTCAAGCGGAAAGCTAATAA...GCAGGACGTCGTCAGGAGACTGATGCTGCATGGGTTTCTTGGGTGCAAATGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| CDS-3UTR CAA 90 bp | AGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGAGTGCTGTCCATTTTGTGCTaGTTGTTTCCTGAGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: RCFPRCEHLLVFSQVSRVLSILC*LFPETS Trigger: GCTGGTCTCAGGAAACAACAAGCACAAAATGGACAG...CACTCTGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | GTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGTGCTGCAGATGTTTACCATTCTGTCCATTTaGTGCTTGTTGTTTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: VQVQQHQLWESAGVLQMFTILSI*CLLFPE Trigger: CTCAGGAAACAACAAGCACAAAATGGACAGAATGGT...AAACATCTGCAGCACGCCCGCCGACTCCCAGAGCTGATGCTGTTGTACTTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | GTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGACTGCCGTGCTTTCGTaGGAAAAATGGAAGTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: VLPWFPSPELGESRPFLLTAVLS*EKWKFV Trigger: AACAAACTTCCATTTTTCCAACGAAAGCACGGCAGT...CAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGGAAACCAAGGCAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | CTCCTGACGACGTCCTGCACTGACCACGACTCCCGCACATGTGCCTTCTACTTGATCGTTTTCACAGAATaGTTGTTTCCCAAGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LLTTSCTDHDSRTCAFYLIVFTE*LFPKSS Trigger: TGAAGACTTGGGAAACAACAATTCTGTGAAAACGAT...CAAGTAGAAGGCACATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006774.11 |
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| CDS-3UTR CAA 90 bp | GCTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCATGTGACTTACCAGATTaGTGCTTAAATACTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AADVSPGVSICLSSARFPCDLPD*CLNTAS Trigger: GGAGGCAGTATTTAAGCACAAATCTGGTAAGTCACA...TGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | AGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGAGTGTACCTGTCTGACTTCTaGAGATTCAGTGCAATCGTT | + |
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Preference number: 5 (lower is better) Translates to: RCFPRCEHLLVFSQVSRVYLSDF*RFSAIV Trigger: AACGATTGCACTGAATCTCAAGAAGTCAGACAGGTA...CACTCTGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGTTTCAGTTTTCATGTCAGACTGAATATCGTTaGGCACCATCTGGTTTACGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPELGESRPFLLFQFSCQTEYR*APSGLR Trigger: CCGTAAACCAGATGGTGCCAAACGATATTCAGTCTG...ACATGAAAACTGAAACAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGTTTCAGTTTTCATGTAAAAATGGAAGTTTGTaGTGTCCCCTGCATGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: PSPELGESRPFLLFQFSCKNGSL*CPLHAG Trigger: TCCTGCATGCAGGGGACACAACAAACTTCCATTTTT...ACATGAAAACTGAAACAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | GCTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAATCGTTTTCACAGAATaGTTGTTTCCCAAGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AADVSPGVSICLSSARFPIVFTE*LFPKSS Trigger: TGAAGACTTGGGAAACAACAATTCTGTGAAAACGAT...TGGAAACCTGGCTGAAGACAAGCAGATGCTCACACCGGGGGAAACATCTGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGTTTCAGTTTTCATGTTCCTTTTCTGTCATGTaGTGTGGTACAGTTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPELGESRPFLLFQFSCSFSVM*CGTVSA Trigger: TGCAGAAACTGTACCACACAACATGACAGAAAAGGA...ACATGAAAACTGAAACAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTCCTTCTGTTTCAGTTTTCATGTTGTGACTTACCAGATTaGTGCTTAAATACTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSPELGESRPFLLFQFSCCDLPD*CLNTAS Trigger: GGAGGCAGTATTTAAGCACAAATCTGGTAAGTCACA...ACATGAAAACTGAAACAGAAGGAAGGGACGGGATTCACCTAACTCTGGGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 |
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| CDS TCA 72 bp | TTATTAGCTTTCCGCTTGAACTTGGGCAGCAGCTGCTaGAGGAGGTCCTTCACTGCATCCCGTTCTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: LLAFRLNLGSSC*RRSFTASRSFT Trigger: AGTGAAAGAACGGGATGCAGTGAAGGACCTCCTTCAGCAGCTGCTGCCCAAGTTCAAGCGGAAAGCTAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 ENSMUST00000165031.8 |
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| CDS CAA 72 bp | TCACTGCCGTGCTTTCGTTGGAAAAATGGAAGTTTGTaGTGTCCCCTGCATGCAGGACCAGCTGAAGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLPCFRWKNGSL*CPLHAGPAEVV Trigger: TACAACTTCAGCTGGTCCTGCATGCAGGGGACACAACAAACTTCCATTTTTCCAACGAAAGCACGGCAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 ENSMUST00000165031.8 |
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| CDS CAA 72 bp | CTTTCACTGCCGTGCTTTCGTTGGAAAAATGGAAGTTaGTTGTGTCCCCTGCATGCAGGACCAGCTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLPCFRWKNGS*LCPLHAGPAEV Trigger: AACTTCAGCTGGTCCTGCATGCAGGGGACACAACAAACTTCCATTTTTCCAACGAAAGCACGGCAGTGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 ENSMUST00000165031.8 |
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| CDS GCA 72 bp | CTGAAGGAGGTCCTTCACTGCATCCCGTTCTTTCACTaGCGTGCTTTCGTTGGAAAAATGGAAGTTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LKEVLHCIPFFH*RAFVGKMEVCC Trigger: ACAACAAACTTCCATTTTTCCAACGAAAGCACGGCAGTGAAAGAACGGGATGCAGTGAAGGACCTCCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006774.11 ENSMUST00000107644.2 ENSMUST00000165031.8 |
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