Pregenerated sensors for GTF2F1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002658Ensembl transcript IDs: ENSMUST00000002733.7
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCGCACAGCGTCCTCTGTCACCTGGACATCACCGCTGCTGGGTGTaGACTTCCCAGACAGGCTCTGGGGACCCGTGTCCATCCGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: GAQRPLSPGHHRCWV*TSQTGSGDPCPSED Trigger: GTCTTCGGATGGACACGGGTCCCCAGAGCCTGTCTGGGAAGTCCACACCCAGCAGCGGTGATGTCCAGGTGACAGAGGACGCTGTGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 90 bp | ATCCGAAGACGCTTGGCTGCTGGAGTCTCACTCGTCCGCTTCCCCTaGTCCAGCTTGCTGGCTGCAGCCCGCAGGGTAGAAGAGGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: IRRRLAAGVSLVRFP*SSLLAAARRVEEVL Trigger: AAGCACCTCTTCTACCCTGCGGGCTGCAGCCAGCAAGCTGGAGCAGGGGAAGCGGACGAGTGAGACTCCAGCAGCCAAGCGTCTTCGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 90 bp | ACCTGGACATCACCGCTGCTGGGTGTGGACTTCCCAGACAGGCTCTaGGGACCCGTGTCCATCCGAAGACGCTTGGCTGCTGGAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: TWTSPLLGVDFPDRL*GPVSIRRRLAAGVS Trigger: TGAGACTCCAGCAGCCAAGCGTCTTCGGATGGACACGGGTCCCCAGAGCCTGTCTGGGAAGTCCACACCCAGCAGCGGTGATGTCCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 90 bp | CTGCTCTCGCTCTGCTCATCCACCCCCTTTGGGCCATCCTCCTGCTaGGGCACTTTGGGCTTGCCTTCTGTCTCATCTGGAGAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LLSLCSSTPFGPSSC*GTLGLPSVSSGELL Trigger: CAGCAGCTCTCCAGATGAGACAGAAGGCAAGCCCAAAGTGCCCCAGCAGGAGGATGGCCCAAAGGGGGTGGATGAGCAGAGCGAGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 90 bp | CTCCTCACTCTCCTCACTGCTCTCGCTCTGCTCATCCACCCCCTTTaGGCCATCCTCCTGCTGGGGCACTTTGGGCTTGCCTTCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: LLTLLTALALLIHPL*AILLLGHFGLAFCL Trigger: GAGACAGAAGGCAAGCCCAAAGTGCCCCAGCAGGAGGATGGCCCAAAGGGGGTGGATGAGCAGAGCGAGAGCAGTGAGGAGAGTGAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 90 bp | TCACTGCTCTCGCTCTGCTCATCCACCCCCTTTGGGCCATCCTCCTaGTGGGGCACTTTGGGCTTGCCTTCTGTCTCATCTGGAGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SLLSLCSSTPFGPSS*WGTLGLPSVSSGEL Trigger: CAGCTCTCCAGATGAGACAGAAGGCAAGCCCAAAGTGCCCCAGCAGGAGGATGGCCCAAAGGGGGTGGATGAGCAGAGCGAGAGCAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 90 bp | TCAGCCCTGTCTTCTTGGTCTGGAACTTCTTCAGCAGGTCCTTTGTaGTCATGGGCTTGCGGGTCAGGTAGCGGCGCACAGCGTCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SALSSWSGTSSAGPL*SWACGSGSGAQRPL Trigger: CAGAGGACGCTGTGCGCCGCTACCTGACCCGCAAGCCCATGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCAAGAAGACAGGGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 90 bp | TCTTGGTCTGGAACTTCTTCAGCAGGTCCTTTGTGGTCATGGGCTTaGGGGTCAGGTAGCGGCGCACAGCGTCCTCTGTCACCTGGACAT | + |
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Preference number: 5 (lower is better) Translates to: SWSGTSSAGPLWSWA*GSGSGAQRPLSPGH Trigger: ATGTCCAGGTGACAGAGGACGCTGTGCGCCGCTACCTGACCCGCAAGCCCATGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 90 bp | CTGTCTTCTTGGTCTGGAACTTCTTCAGCAGGTCCTTTGTGGTCATaGGCTTGCGGGTCAGGTAGCGGCGCACAGCGTCCTCTGTCACCT | + |
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Preference number: 5 (lower is better) Translates to: LSSWSGTSSAGPLWS*ACGSGSGAQRPLSP Trigger: AGGTGACAGAGGACGCTGTGCGCCGCTACCTGACCCGCAAGCCCATGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCAAGAAGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS TCA 90 bp | GCATCGCTGGCATCGGAGGACATTTCCAGGTCATCCTCCAGGTCATaGATGCGCAGCTCACTAGGCTTCTTGCGACTGCGCTTCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ASLASEDISRSSSRS*MRSSLGFLRLRFSF Trigger: GAAGGAGAAGCGCAGTCGCAAGAAGCCTAGTGAGCTGCGCATTCATGACCTGGAGGATGACCTGGAAATGTCCTCCGATGCCAGCGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 90 bp | GCGCCAGCACATTTACTGTCTGCTCGCTGCTCAGCCCTGTCTTCTTaGTCTGGAACTTCTTCAGCAGGTCCTTTGTGGTCATGGGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: APAHLLSARCSALSS*SGTSSAGPLWSWAC Trigger: GCAAGCCCATGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTAAATGTGCTGGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 90 bp | TTATCACCAATCATCTTGCGCTCAGGGTTGAGGCGCTTGAGGATCTaGGCCAGCACATTTACTGTCTGCTCGCTGCTCAGCCCTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LSPIILRSGLRRLRI*ASTFTVCSLLSPVF Trigger: GAAGACAGGGCTGAGCAGCGAGCAGACAGTAAATGTGCTGGCGCAGATCCTCAAGCGCCTCAACCCTGAGCGCAAGATGATTGGTGATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 90 bp | AGCACATTTACTGTCTGCTCGCTGCTCAGCCCTGTCTTCTTGGTCTaGAACTTCTTCAGCAGGTCCTTTGTGGTCATGGGCTTGCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: STFTVCSLLSPVFLV*NFFSRSFVVMGLRV Trigger: GACCCGCAAGCCCATGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTAAATGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 90 bp | CTCCTCCCTAAGCTTGCGGTTGAATTCACTGCCTGCACCGGACTCTaGCATCTCTTCTTCCTGGTAAATCTTCTTGTTGCTCAGATCTCG | + |
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Preference number: 5 (lower is better) Translates to: LLPKLAVEFTACTGL*HLFFLVNLLVAQIS Trigger: CGAGATCTGAGCAACAAGAAGATTTACCAGGAAGAAGAGATGCCAGAGTCCGGTGCAGGCAGTGAATTCAACCGCAAGCTTAGGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 90 bp | TTGAACTTCCGTCCTGATTTGCCATTGACACGGAGTAGCCAAGGCTaGTCCTCAGGCCGAAACTCCTTTAGGACAATGCCATACTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LNFRPDLPLTRSSQG*SSGRNSFRTMPYFF Trigger: GAAGAAGTATGGCATTGTCCTAAAGGAGTTTCGGCCTGAGGACCAGCCTTGGCTACTCCGTGTCAATGGCAAATCAGGACGGAAGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | GCTGGCTGCAGCCCGCAGGGTAGAAGAGGTGCTTGCTaGTTCTGCACTGGGAGTCCCTGGCCGACTGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: AGCSPQGRRGAC*FCTGSPWPTGA Trigger: GGCACCAGTCGGCCAGGGACTCCCAGTGCAGAAGCAGCAAGCACCTCTTCTACCCTGCGGGCTGCAGCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | GCTCTGGGGACCCGTGTCCATCCGAAGACGCTTGGCTaGTGGAGTCTCACTCGTCCGCTTCCCCTGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ALGTRVHPKTLG*WSLTRPLPLLQ Trigger: CTGGAGCAGGGGAAGCGGACGAGTGAGACTCCAGCAGCCAAGCGTCTTCGGATGGACACGGGTCCCCAGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | GGCGCACAGCGTCCTCTGTCACCTGGACATCACCGCTaGTGGGTGTGGACTTCCCAGACAGGCTCTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GAQRPLSPGHHR*WVWTSQTGSGD Trigger: GTCCCCAGAGCCTGTCTGGGAAGTCCACACCCAGCAGCGGTGATGTCCAGGTGACAGAGGACGCTGTGCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | GCACAGCGTCCTCTGTCACCTGGACATCACCGCTGCTaGGTGTGGACTTCCCAGACAGGCTCTGGGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: AQRPLSPGHHRC*VWTSQTGSGDP Trigger: CGGGTCCCCAGAGCCTGTCTGGGAAGTCCACACCCAGCAGCGGTGATGTCCAGGTGACAGAGGACGCTGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | GACAGGCTCTGGGGACCCGTGTCCATCCGAAGACGCTaGGCTGCTGGAGTCTCACTCGTCCGCTTCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: DRLWGPVSIRRR*AAGVSLVRFPC Trigger: GCAGGGGAAGCGGACGAGTGAGACTCCAGCAGCCAAGCGTCTTCGGATGGACACGGGTCCCCAGAGCCTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | CGTCCTCTGTCACCTGGACATCACCGCTGCTGGGTGTaGACTTCCCAGACAGGCTCTGGGGACCCGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RPLSPGHHRCWV*TSQTGSGDPCP Trigger: TGGACACGGGTCCCCAGAGCCTGTCTGGGAAGTCCACACCCAGCAGCGGTGATGTCCAGGTGACAGAGGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 90 bp | CCTCCTCACTCTCCTCACTGCTCTCGCTCTGCTCATCCACCCCCTTaGGGCCATCCTCCTGCTGGGGCACTTTGGGCTTGCCTTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PPHSPHCSRSAHPPP*GHPPAGALWACLLS Trigger: AGACAGAAGGCAAGCCCAAAGTGCCCCAGCAGGAGGATGGCCCAAAGGGGGTGGATGAGCAGAGCGAGAGCAGTGAGGAGAGTGAGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | CCTTTGGGCCATCCTCCTGCTGGGGCACTTTGGGCTTaGCTTCTGTCTCATCTGGAGAGCTGCTGGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PLGHPPAGALWA*LLSHLESCWSH Trigger: ATGGCTCCAGCAGCTCTCCAGATGAGACAGAAGGCAAGCCCAAAGTGCCCCAGCAGGAGGATGGCCCAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | TCGCTCTGCTCATCCACCCCCTTTGGGCCATCCTCCTaGTGGGGCACTTTGGGCTTGCCTTCTGTCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: SLCSSTPFGPSS*WGTLGLPSVSS Trigger: AGATGAGACAGAAGGCAAGCCCAAAGTGCCCCAGCAGGAGGATGGCCCAAAGGGGGTGGATGAGCAGAGCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | GGAACTTCTTCAGCAGGTCCTTTGTGGTCATGGGCTTaGGGGTCAGGTAGCGGCGCACAGCGTCCTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GTSSAGPLWSWA*GSGSGAQRPLS Trigger: TGACAGAGGACGCTGTGCGCCGCTACCTGACCCGCAAGCCCATGACCACAAAGGACCTGCTGAAGAAGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | CTCTGCTCATCCACCCCCTTTGGGCCATCCTCCTGCTaGGGCACTTTGGGCTTGCCTTCTGTCTCATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LCSSTPFGPSSC*GTLGLPSVSSG Trigger: TCCAGATGAGACAGAAGGCAAGCCCAAAGTGCCCCAGCAGGAGGATGGCCCAAAGGGGGTGGATGAGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | TGGTCTGGAACTTCTTCAGCAGGTCCTTTGTGGTCATaGGCTTGCGGGTCAGGTAGCGGCGCACAGCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: WSGTSSAGPLWS*ACGSGSGAQRP Trigger: AGGACGCTGTGCGCCGCTACCTGACCCGCAAGCCCATGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | ATGCCATACTTCTTCCGGCGCGCCTCCTCCCTAAGCTaGCGGTTGAATTCACTGCCTGCACCGGACTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: MPYFFRRASSLS*RLNSLPAPDSG Trigger: GCCAGAGTCCGGTGCAGGCAGTGAATTCAACCGCAAGCTTAGGGAGGAGGCGCGCCGGAAGAAGTATGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | TGGAGGTTCTGCTGCCCTCTTCACCACTGGCATCGCTaGCATCGGAGGACATTTCCAGGTCATCCTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: WRFCCPLHHWHR*HRRTFPGHPPG Trigger: ACCTGGAGGATGACCTGGAAATGTCCTCCGATGCCAGCGATGCCAGTGGTGAAGAGGGCAGCAGAACCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | TACTTCTTCCGGCGCGCCTCCTCCCTAAGCTTGCGGTaGAATTCACTGCCTGCACCGGACTCTGGCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: YFFRRASSLSLR*NSLPAPDSGIS Trigger: AGAGATGCCAGAGTCCGGTGCAGGCAGTGAATTCAACCGCAAGCTTAGGGAGGAGGCGCGCCGGAAGAAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | CTGCCTGCCTTGGTCACAGGGGCCTTTTTCTTAGCCTaGGAGGTTCTGCTGCCCTCTTCACCACTGGCATCG | + |
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Preference number: 6 (lower is better) Translates to: LPALVTGAFFLA*EVLLPSSPLAS Trigger: CGATGCCAGTGGTGAAGAGGGCAGCAGAACCTCCAAGGCTAAGAAAAAGGCCCCTGTGACCAAGGCAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 90 bp | ACAATGCCATACTTCTTCCGGCGCGCCTCCTCCCTAAGCTTGCGGTaGAATTCACTGCCTGCACCGGACTCTGGCATCTCTTCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TMPYFFRRASSLSLR*NSLPAPDSGISSSW Trigger: CCAGGAAGAAGAGATGCCAGAGTCCGGTGCAGGCAGTGAATTCAACCGCAAGCTTAGGGAGGAGGCGCGCCGGAAGAAGTATGGCATTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS TCA 72 bp | GCATCGGAGGACATTTCCAGGTCATCCTCCAGGTCATaGATGCGCAGCTCACTAGGCTTCTTGCGACTGCGC | + |
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Preference number: 6 (lower is better) Translates to: ASEDISRSSSRS*MRSSLGFLRLR Trigger: GCGCAGTCGCAAGAAGCCTAGTGAGCTGCGCATTCATGACCTGGAGGATGACCTGGAAATGTCCTCCGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | AGGCGCTTGAGGATCTGCGCCAGCACATTTACTGTCTaGTCGCTGCTCAGCCCTGTCTTCTTGGTCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: RRLRICASTFTV*SLLSPVFLVWN Trigger: GTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTAAATGTGCTGGCGCAGATCCTCAAGCGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | ATCATCTTGCGCTCAGGGTTGAGGCGCTTGAGGATCTaGGCCAGCACATTTACTGTCTGCTCGCTGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: IILRSGLRRLRI*ASTFTVCSLLS Trigger: GCTGAGCAGCGAGCAGACAGTAAATGTGCTGGCGCAGATCCTCAAGCGCCTCAACCCTGAGCGCAAGATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | TCTTCTTGGTCTGGAACTTCTTCAGCAGGTCCTTTGTaGTCATGGGCTTGCGGGTCAGGTAGCGGCGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SSWSGTSSAGPL*SWACGSGSGAQ Trigger: CTGTGCGCCGCTACCTGACCCGCAAGCCCATGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCAAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | TCTTCATCCTGGTCCTGGTCCTTGAGCCGCCGCTGCTaGATGATGCTGAAGTGGTTTAGGACCTTGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSSWSWSLSRRC*MMLKWFRTLFL Trigger: GAGGAACAAGGTCCTAAACCACTTCAGCATCATGCAGCAGCGGCGGCTCAAGGACCAGGACCAGGATGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | ACTGTCTGCTCGCTGCTCAGCCCTGTCTTCTTGGTCTaGAACTTCTTCAGCAGGTCCTTTGTGGTCATGGGC | + |
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Preference number: 6 (lower is better) Translates to: TVCSLLSPVFLV*NFFSRSFVVMG Trigger: GCCCATGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 90 bp | TTTAGGACAATGCCATACTTCTTCCGGCGCGCCTCCTCCCTAAGCTaGCGGTTGAATTCACTGCCTGCACCGGACTCTGGCATCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FRTMPYFFRRASSLS*RLNSLPAPDSGISS Trigger: AGAAGAGATGCCAGAGTCCGGTGCAGGCAGTGAATTCAACCGCAAGCTTAGGGAGGAGGCGCGCCGGAAGAAGTATGGCATTGTCCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 90 bp | GCTTCCTCAGCAGTGAGTGTGCGGTGTCGGGCCAGTGGTGTGAAATaGTACCAGTTCTGTACAGGGAAAGCCTCAAAGGCACCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ASSAVSVRCRASGVK*YQFCTGKASKAPSA Trigger: TGCTGATGGTGCCTTTGAGGCTTTCCCTGTACAGAACTGGTACAATTTCACACCACTGGCCCGACACCGCACACTCACTGCTGAGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 90 bp | TGCGCCAGCACATTTACTGTCTGCTCGCTGCTCAGCCCTGTCTTCTaGGTCTGGAACTTCTTCAGCAGGTCCTTTGTGGTCATGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: CASTFTVCSLLSPVF*VWNFFSRSFVVMGL Trigger: CAAGCCCATGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTAAATGTGCTGGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | CGCCTCCTCCCTAAGCTTGCGGTTGAATTCACTGCCTaGACCGGACTCTGGCATCTCTTCTTCCTGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: RLLPKLAVEFTA*TGLWHLFFLVN Trigger: ATTTACCAGGAAGAAGAGATGCCAGAGTCCGGTGCAGGCAGTGAATTCAACCGCAAGCTTAGGGAGGAGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | TCATCTTCATCCTGGTCCTGGTCCTTGAGCCGCCGCTaGTGCATGATGCTGAAGTGGTTTAGGACCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSSWSWSLSRR*CMMLKWFRTLF Trigger: GAACAAGGTCCTAAACCACTTCAGCATCATGCAGCAGCGGCGGCTCAAGGACCAGGACCAGGATGAAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | CGTCCTGATTTGCCATTGACACGGAGTAGCCAAGGCTaGTCCTCAGGCCGAAACTCCTTTAGGACAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: RPDLPLTRSSQG*SSGRNSFRTMP Trigger: TGGCATTGTCCTAAAGGAGTTTCGGCCTGAGGACCAGCCTTGGCTACTCCGTGTCAATGGCAAATCAGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | GCAGTGAGTGTGCGGTGTCGGGCCAGTGGTGTGAAATaGTACCAGTTCTGTACAGGGAAAGCCTCAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: AVSVRCRASGVK*YQFCTGKASKA Trigger: TGCCTTTGAGGCTTTCCCTGTACAGAACTGGTACAATTTCACACCACTGGCCCGACACCGCACACTCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 90 bp | AAGTGCATCTTATCACCAATCATCTTGCGCTCAGGGTTGAGGCGCTaGAGGATCTGCGCCAGCACATTTACTGTCTGCTCGCTGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: KCILSPIILRSGLRR*RICASTFTVCSLLS Trigger: GCTGAGCAGCGAGCAGACAGTAAATGTGCTGGCGCAGATCCTCAAGCGCCTCAACCCTGAGCGCAAGATGATTGGTGATAAGATGCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS TCA 72 bp | CAGGGAAAGCCTCAAAGGCACCATCAGCACACTGTGTaGAGATGTAGTAGGCTGTGTTCTCTGTTACCCCGC | + |
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Preference number: 6 (lower is better) Translates to: QGKPQRHHQHTV*RCSRLCSLLPR Trigger: GCGGGGTAACAGAGAACACAGCCTACTACATCTTCACACAGTGTGCTGATGGTGCCTTTGAGGCTTTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS GCA 72 bp | CCTCTTTGGGGGTGTCTTCTTCTTCGCCATGAAGAGTaGAGAGGAGGTCTCACTGTCAATGTCGCTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLWGCLLLRHEE*RGGLTVNVALF Trigger: GAAGAGAGCGACATTGACAGTGAGACCTCCTCTGCACTCTTCATGGCGAAGAAGAAGACACCCCCAAAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | GTCATCACTGCTGTCTTTCCTGCGCTTCTTCTCTTGTaGGGTAGGGGCCTTCTTCTCTTCTTCCTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VITAVFPALLLL*GRGLLLFFLLL Trigger: AAGGAGGAGGAAGAAGAGAAGAAGGCCCCTACCCCACAAGAGAAGAAGCGCAGGAAAGACAGCAGTGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | TTATCACCAATCATCTTGCGCTCAGGGTTGAGGCGCTaGAGGATCTGCGCCAGCACATTTACTGTCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LSPIILRSGLRR*RICASTFTVCS Trigger: CGAGCAGACAGTAAATGTGCTGGCGCAGATCCTCAAGCGCCTCAACCCTGAGCGCAAGATGATTGGTGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | TCTTTGAGGGAGAAGTGCATCTTATCACCAATCATCTaGCGCTCAGGGTTGAGGCGCTTGAGGATCTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SLREKCILSPII*RSGLRRLRICA Trigger: GGCGCAGATCCTCAAGCGCCTCAACCCTGAGCGCAAGATGATTGGTGATAAGATGCACTTCTCCCTCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 90 bp | TCTGTTACCCCGCCTTTCTTAATGCCTTTGAACTTCCGTCCTGATTaGCCATTGACACGGAGTAGCCAAGGCTGGTCCTCAGGCCGAAAC | + |
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Preference number: 6 (lower is better) Translates to: SVTPPFLMPLNFRPD*PLTRSSQGWSSGRN Trigger: GTTTCGGCCTGAGGACCAGCCTTGGCTACTCCGTGTCAATGGCAAATCAGGACGGAAGTTCAAAGGCATTAAGAAAGGCGGGGTAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 90 bp | TTGAGGGAGAAGTGCATCTTATCACCAATCATCTTGCGCTCAGGGTaGAGGCGCTTGAGGATCTGCGCCAGCACATTTACTGTCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LREKCILSPIILRSG*RRLRICASTFTVCS Trigger: CGAGCAGACAGTAAATGTGCTGGCGCAGATCCTCAAGCGCCTCAACCCTGAGCGCAAGATGATTGGTGATAAGATGCACTTCTCCCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CCA 72 bp | CATTTACTGTCTGCTCGCTGCTCAGCCCTGTCTTCTTaGTCTGGAACTTCTTCAGCAGGTCCTTTGTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: HLLSARCSALSS*SGTSSAGPLWS Trigger: TGACCACAAAGGACCTGCTGAAGAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | CCGCCTTTCTTAATGCCTTTGAACTTCCGTCCTGATTaGCCATTGACACGGAGTAGCCAAGGCTGGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PPFLMPLNFRPD*PLTRSSQGWSS Trigger: TGAGGACCAGCCTTGGCTACTCCGTGTCAATGGCAAATCAGGACGGAAGTTCAAAGGCATTAAGAAAGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | AAGTGCATCTTATCACCAATCATCTTGCGCTCAGGGTaGAGGCGCTTGAGGATCTGCGCCAGCACATTTACT | + |
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Preference number: 6 (lower is better) Translates to: KCILSPIILRSG*RRLRICASTFT Trigger: AGTAAATGTGCTGGCGCAGATCCTCAAGCGCCTCAACCCTGAGCGCAAGATGATTGGTGATAAGATGCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | TCTCGCTCCAGCCGTGCCTGGTTCCAGGTAGCAAAGTaGACTTTATCGGCTGCATTAAAAGCCATTATGTTG | + |
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Preference number: 6 (lower is better) Translates to: SRSSRAWFQVAK*TLSAALKAIML Trigger: CAACATAATGGCTTTTAATGCAGCCGATAAAGTCAACTTTGCTACCTGGAACCAGGCACGGCTGGAGCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 90 bp | TTGCTCAGATCTCGCTCCAGCCGTGCCTGGTTCCAGGTAGCAAAGTaGACTTTATCGGCTGCATTAAAAGCCATTATGTTGTATCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLRSRSSRAWFQVAK*TLSAALKAIMLYLL Trigger: CAAAAGATACAACATAATGGCTTTTAATGCAGCCGATAAAGTCAACTTTGCTACCTGGAACCAGGCACGGCTGGAGCGAGATCTGAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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| CDS CAA 72 bp | TTATCGGCTGCATTAAAAGCCATTATGTTGTATCTTTaGGCTGTGTTCTTGGGGACTCGGACGACGTACTCG | + |
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Preference number: 6 (lower is better) Translates to: LSAALKAIMLYL*AVFLGTRTTYS Trigger: CGAGTACGTCGTCCGAGTCCCCAAGAACACAGCCAAAAGATACAACATAATGGCTTTTAATGCAGCCGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002733.7 |
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