Pregenerated sensors for GTF2E2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031585Ensembl transcript IDs: ENSMUST00000167264.8, ENSMUST00000170705.8, ENSMUST00000171010.8, ENSMUST00000187392.7, ENSMUST00000190639.2, ENSMUST00000190675.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGGGCTGCAGCTGCTCCCTGCCATTTTCAAGAAGTAAGAGACAAACTGAATTTCCTCCTCTCTCAGGCCTaGGGAGCAGGCAGGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GAAAAPCHFQEVRDKLNFLLSQA*GAGRKA Trigger: TGCCTTCCTGCCTGCTCCTCAGGCCTGAGAGAGGAG...GAAATTCAGTTTGTCTCTTACTTCTTGAAAATGGCAGGGAGCAGCTGCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAACCCGCTCCTGTTCTGTAAACTGAGCAGCTCCTCTCTCAGGCCTGAGGAGGAAGGCAGACAGTCTTaGGATCCCAAGCATCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GNPLLFCKLSSSSLRPEEEGRQS*DPKHQE Trigger: TTCTTGATGCTTGGGATCTCAAGACTGTCTGCCTTC...CTCCTCAGGCCTGAGAGAGGAGCTGCTCAGTTTACAGAACAGGAGCGGGTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR TCA 90 bp | AACACCCATTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCTCCTGTTCTGTAAACTaGGCAGCTCCTCTCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: NTHSFPLACWMKRMSLVTSCSVN*AAPLSG Trigger: GCCTGAGAGAGGAGCTGCTCAGTTTACAGAACAGGA...GGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAATGGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTGCAGCTGCTCCCTGCCATTTTCAAGAAGTAAGAGACAAACTGAATTTCGAAGGCAGACAGTCTTaGGATCCCAAGCATCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GAAAAPCHFQEVRDKLNFEGRQS*DPKHQE Trigger: TTCTTGATGCTTGGGATCTCAAGACTGTCTGCCTTC...GAAATTCAGTTTGTCTCTTACTTCTTGAAAATGGCAGGGAGCAGCTGCAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTGCAGCTGCTCCCTGCCATTTTCAAGAAGTAAGAGACAAACTGAATTTCTCCTTCCCACTAGCCTaGTGGATGAAAAGAATGAGT | + |
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Preference number: 2 (lower is better) Translates to: GAAAAPCHFQEVRDKLNFSFPLA*WMKRMS Trigger: ACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGA...GAAATTCAGTTTGTCTCTTACTTCTTGAAAATGGCAGGGAGCAGCTGCAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGCAGCTGCTCCCTGCCATTTTCAAGAAGTAAGAGACAAACTGAATTTCTTCCCACTAGCCTGCTaGATGAAAAGAATGAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GAAAAPCHFQEVRDKLNFFPLAC*MKRMSL Trigger: CAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAA...GAAATTCAGTTTGTCTCTTACTTCTTGAAAATGGCAGGGAGCAGCTGCAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTGCAGCTGCTCCCTGCCATTTTCAAGAAGTAAGAGACAAACTGAATTTCTGGAATAAACAAAACTaGATTCAGCACCATCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GAAAAPCHFQEVRDKLNFWNKQN*IQHHPP Trigger: TGGAGGATGGTGCTGAATGCAGTTTTGTTTATTCCA...GAAATTCAGTTTGTCTCTTACTTCTTGAAAATGGCAGGGAGCAGCTGCAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGCAGCTGCTCCCTGCCATTTTCAAGAAGTAAGAGACAAACTGAATTTCCGAATAGAGAAAACATaGAATCCAGAACCATTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: GAAAAPCHFQEVRDKLNFRIEKT*NPEPFR Trigger: TCTAAATGGTTCTGGATTCCATGTTTTCTCTATTCG...GAAATTCAGTTTGTCTCTTACTTCTTGAAAATGGCAGGGAGCAGCTGCAGCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR GCA 90 bp | GGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGAGTGTCATATCCTTCCCACTAGCCTaGTGGATGAAAAGAATGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GIQNHLEIKINSRHLSVISFPLA*WMKRMS Trigger: ACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGA...TATGACACTCAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAAACATGGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGTCCTTCCCACTAGCCTaGTGGATGAAAAGAATGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RKHGIQNHLEIKINSRHLSFPLA*WMKRMS Trigger: ACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGA...CAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCCATGTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAACATGGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGTTCCCACTAGCCTGCTaGATGAAAAGAATGAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RKHGIQNHLEIKINSRHLFPLAC*MKRMSL Trigger: CAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAA...CAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCCATGTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCCGCTCCTGGGAAGGCAGACAGTCTaGAGATCCCAAGCATCAAGA | + |
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Preference number: 3 (lower is better) Translates to: FLPTSLLDEKNESGNPLLGRQTV*RSQASR Trigger: TCTTGATGCTTGGGATCTCAAGACTGTCTGCCTTCC...CAGGAGCGGGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR GCA 72 bp | AAGTTAAACAGGAACACCCATTCCTTCCCACTAGCCTaGTGGATGAAAAGAATGAGTCTGGTAACCCGCTCC | + |
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Preference number: 3 (lower is better) Translates to: KLNRNTHSFPLA*WMKRMSLVTRS Trigger: GGAGCGGGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAATGGGTGTTCCTGTTTAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR CCA 72 bp | TTAAACAGGAACACCCATTCCTTCCCACTAGCCTGCTaGATGAAAAGAATGAGTCTGGTAACCCGCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LNRNTHSFPLAC*MKRMSLVTRSC Trigger: ACAGGAGCGGGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAATGGGTGTTCCTGTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR-3UTR CAA 90 bp | GGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGAGTGTCATAGGAAGGCAGACAGTCTaGAGATCCCAAGCATCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GIQNHLEIKINSRHLSVIGRQTV*RSQASR Trigger: TCTTGATGCTTGGGATCTCAAGACTGTCTGCCTTCC...TATGACACTCAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| 3UTR GCA 72 bp | AGTCTTGAGATCCCAAGCATCAAGAAAGATCTCGACTaGGTGTCTGTAACTGTGTTTAGGAATAAAAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLEIPSIKKDLD*VSVTVFRNKSV Trigger: AACACTTTTATTCCTAAACACAGTTACAGACACGCAGTCGAGATCTTTCTTGATGCTTGGGATCTCAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | GGTAACCCGCTCCTGTTCTGTAAACTGAGCAGCTCCTCTCTCAGGCCTGAGGAGGCCACTGTTTCTGCTTaGGTCCGATGTCTAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNPLLFCKLSSSSLRPEEATVSA*VRCLSA Trigger: AGCACTTAGACATCGGACTCAAGCAGAAACAGTGGC...CTCCTCAGGCCTGAGAGAGGAGCTGCTCAGTTTACAGAACAGGAGCGGGTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | GGTAACCCGCTCCTGTTCTGTAAACTGAGCAGCTCCTCTCTCAGGCCTGAGGAGCCATTGAATCCACAGTaGCACTCCTCCACAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GNPLLFCKLSSSSLRPEEPLNPQ*HSSTVS Trigger: AGAAACTGTGGAGGAGTGTCACTGTGGATTCAATGG...CTCCTCAGGCCTGAGAGAGGAGCTGCTCAGTTTACAGAACAGGAGCGGGTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CCA 90 bp | GGTAACCCGCTCCTGTTCTGTAAACTGAGCAGCTCCTCTCTCAGGCCTGAGGAGCTTACAAATAGTATCTaGTCCCCTAAAGCCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GNPLLFCKLSSSSLRPEELTNSI*SPKALT Trigger: TGTCAAGGCTTTAGGGGACCAGATACTATTTGTAAG...CTCCTCAGGCCTGAGAGAGGAGCTGCTCAGTTTACAGAACAGGAGCGGGTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGGCAGGAAGGCAGACAGTCTTGAGATCCCAAGCATCAAGAAAGATCTCGGTCCAGATTCCTGCATaGAAGAAATACCCTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQAGRQTVLRSQASRKISVQIPA*KKYPVA Trigger: AGCGACAGGGTATTTCTTCCATGCAGGAATCTGGAC...CGAGATCTTTCTTGATGCTTGGGATCTCAAGACTGTCTGCCTTCCTGCCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | TTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCCGCTCCTGGGCTTTTTCCTTCTCTaGATAGAGGCCACTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FLPTSLLDEKNESGNPLLGFFLL*IEATFF Trigger: AAAGAAAGTGGCCTCTATTCAGAGAAGGAAAAAGCC...CAGGAGCGGGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGCATACCCTGTGTTCCAAAGATGAAATCCTTACGCCAACAGTACTGACTCCATTGAATCCACAGTaGCACTCCTCCACAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QRHTLCSKDEILTPTVLTPLNPQ*HSSTVS Trigger: AGAAACTGTGGAGGAGTGTCACTGTGGATTCAATGG...AGTCAGTACTGTTGGCGTAAGGATTTCATCTTTGGAACACAGGGTATGCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | AACACCCATTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCTTTCTCCTCATCCATTaGATCCACAGTGACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: NTHSFPLACWMKRMSLVTFLLIH*IHSDTP Trigger: AGGAGTGTCACTGTGGATTCAATGGATGAGGAGAAA...GGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAATGGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | GGGGCTGCAGCTGCTCCCTGCCATTTTCAAGAAGTAAGAGACAAACTGAATTTCGCCAAGTGTTCATTGTaGGTCTTAAACCGTCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GAAAAPCHFQEVRDKLNFAKCSL*VLNRRF Trigger: AAAGCGACGGTTTAAGACTCACAATGAACACTTGGC...GAAATTCAGTTTGTCTCTTACTTCTTGAAAATGGCAGGGAGCAGCTGCAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGCATACCCTGTGTTCCAAAGATGAAATCCTTACGCCAACAGTACTGACTTTTCTCCTCATCCATTaGATCCACAGTGACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: QRHTLCSKDEILTPTVLTFLLIH*IHSDTP Trigger: AGGAGTGTCACTGTGGATTCAATGGATGAGGAGAAA...AGTCAGTACTGTTGGCGTAAGGATTTCATCTTTGGAACACAGGGTATGCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | AACACCCATTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCGGCTTTTTCCTTCTCTaGATAGAGGCCACTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: NTHSFPLACWMKRMSLVTGFFLL*IEATFF Trigger: AAAGAAAGTGGCCTCTATTCAGAGAAGGAAAAAGCC...GGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAATGGGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGCATACCCTGTGTTCCAAAGATGAAATCCTTACGCCAACAGTACTGACTGCCAAGTGTTCATTGTaGGTCTTAAACCGTCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: QRHTLCSKDEILTPTVLTAKCSL*VLNRRF Trigger: AAAGCGACGGTTTAAGACTCACAATGAACACTTGGC...AGTCAGTACTGTTGGCGTAAGGATTTCATCTTTGGAACACAGGGTATGCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR GCA 90 bp | AACACCCATTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCTTTGGTCCAGATTCCTaGATGGAAGAAATACCCTGT | + |
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Preference number: 4 (lower is better) Translates to: NTHSFPLACWMKRMSLVTFGPDS*MEEIPC Trigger: ACAGGGTATTTCTTCCATGCAGGAATCTGGACCAAA...GGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAATGGGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR GCA 90 bp | GGGGCTGCAGCTGCTCCCTGCCATTTTCAAGAAGTAAGAGACAAACTGAATTTCTTTGGTCCAGATTCCTaGATGGAAGAAATACCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GAAAAPCHFQEVRDKLNFFGPDS*MEEIPC Trigger: ACAGGGTATTTCTTCCATGCAGGAATCTGGACCAAA...GAAATTCAGTTTGTCTCTTACTTCTTGAAAATGGCAGGGAGCAGCTGCAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGCATACCCTGTGTTCCAAAGATGAAATCCTTACGCCAACAGTACTGACTGGCTTTTTCCTTCTCTaGATAGAGGCCACTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: QRHTLCSKDEILTPTVLTGFFLL*IEATFF Trigger: AAAGAAAGTGGCCTCTATTCAGAGAAGGAAAAAGCC...AGTCAGTACTGTTGGCGTAAGGATTTCATCTTTGGAACACAGGGTATGCCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CCA 90 bp | AACACCCATTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCCTTACAAATAGTATCTaGTCCCCTAAAGCCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: NTHSFPLACWMKRMSLVTLTNSI*SPKALT Trigger: TGTCAAGGCTTTAGGGGACCAGATACTATTTGTAAG...GGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAATGGGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | GGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGAGTGTCATAGCCACTGTTTCTGCTTaGGTCCGATGTCTAAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GIQNHLEIKINSRHLSVIATVSA*VRCLSA Trigger: AGCACTTAGACATCGGACTCAAGCAGAAACAGTGGC...TATGACACTCAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CCA 90 bp | GGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGAGTGTCATAGTCCAGATTCCTGCATaGAAGAAATACCCTGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: GIQNHLEIKINSRHLSVIVQIPA*KKYPVA Trigger: AGCGACAGGGTATTTCTTCCATGCAGGAATCTGGAC...TATGACACTCAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | AGAAAACATGGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGCCATTGAATCCACAGTaGCACTCCTCCACAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RKHGIQNHLEIKINSRHLPLNPQ*HSSTVS Trigger: AGAAACTGTGGAGGAGTGTCACTGTGGATTCAATGG...CAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCCATGTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR TCA 90 bp | AGAAAACATGGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGTTTCTCCTCATCCATTaGATCCACAGTGACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: RKHGIQNHLEIKINSRHLFLLIH*IHSDTP Trigger: AGGAGTGTCACTGTGGATTCAATGGATGAGGAGAAA...CAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCCATGTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CCA 90 bp | GGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGAGTGTCATACTTACAAATAGTATCTaGTCCCCTAAAGCCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: GIQNHLEIKINSRHLSVILTNSI*SPKALT Trigger: TGTCAAGGCTTTAGGGGACCAGATACTATTTGTAAG...TATGACACTCAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | GGTAACCCGCTCCTGTTCTGTAAACTGAGCAGCTCCTCTCTCAGGCCTGAGGAGTCAATTTTAGGATTGTaGACTAAAGCCTCCGTCATC | + |
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Preference number: 5 (lower is better) Translates to: GNPLLFCKLSSSSLRPEESILGL*TKASVI Trigger: GATGACGGAGGCTTTAGTCAACAATCCTAAAATTGA...CTCCTCAGGCCTGAGAGAGGAGCTGCTCAGTTTACAGAACAGGAGCGGGTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | GGTAACCCGCTCCTGTTCTGTAAACTGAGCAGCTCCTCTCTCAGGCCTGAGGAGAAGTTGTACTTAGGTTaGAAGGCATATTTCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: GNPLLFCKLSSSSLRPEEKLYLG*KAYFPS Trigger: GGATGGGAAATATGCCTTCAAACCTAAGTACAACTT...CTCCTCAGGCCTGAGAGAGGAGCTGCTCAGTTTACAGAACAGGAGCGGGTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | TTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCCGCTCCTGTGGTCCCCTAAAGCCTaGACAGCTTTCTGGGAATTA | + |
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Preference number: 5 (lower is better) Translates to: FLPTSLLDEKNESGNPLLWSPKA*TAFWEL Trigger: TAATTCCCAGAAAGCTGTCAAGGCTTTAGGGGACCA...CAGGAGCGGGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS GCA 90 bp | GCCTCCGTCATCAGCCACTGTTTCTGCTTGAGTCCGATGTCTAAGTaGTGTGTCTCATCCAGAATCTCTTCCAACGTTAGAGGATGTGTA | + |
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Preference number: 5 (lower is better) Translates to: ASVISHCFCLSPMSK*CVSSRISSNVRGCV Trigger: TACACATCCTCTAACGTTGGAAGAGATTCTGGATGAGACACAGCACTTAGACATCGGACTCAAGCAGAAACAGTGGCTGATGACGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 ENSMUST00000190639.2 |
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| CDS-3UTR CAA 90 bp | GCAGGAAGGCAGACAGTCTTGAGATCCCAAGCATCAAGAAAGATCTCGACTGCGGAAAGAGCTCGTTTTTaGAACAGCTCTCGATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: AGRQTVLRSQASRKISTAERARF*NSSRSL Trigger: GAGAGATCGAGAGCTGTTCAAAAAACGAGCTCTTTC...CGCAGTCGAGATCTTTCTTGATGCTTGGGATCTCAAGACTGTCTGCCTTCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | AACACCCATTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCGAAAGAGCTCGTTTTTaGAACAGCTCTCGATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: NTHSFPLACWMKRMSLVTERARF*NSSRSL Trigger: GAGAGATCGAGAGCTGTTCAAAAAACGAGCTCTTTC...GGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAATGGGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | GAGCAGGCAGGAAGGCAGACAGTCTTGAGATCCCAAGCATCAAGAAAGATCTCGAAGTTGTACTTAGGTTaGAAGGCATATTTCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: EQAGRQTVLRSQASRKISKLYLG*KAYFPS Trigger: GGATGGGAAATATGCCTTCAAACCTAAGTACAACTT...CGAGATCTTTCTTGATGCTTGGGATCTCAAGACTGTCTGCCTTCCTGCCTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | CAGAGGCATACCCTGTGTTCCAAAGATGAAATCCTTACGCCAACAGTACTGACTTGGTCCCCTAAAGCCTaGACAGCTTTCTGGGAATTA | + |
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Preference number: 5 (lower is better) Translates to: QRHTLCSKDEILTPTVLTWSPKA*TAFWEL Trigger: TAATTCCCAGAAAGCTGTCAAGGCTTTAGGGGACCA...AGTCAGTACTGTTGGCGTAAGGATTTCATCTTTGGAACACAGGGTATGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | CAGAGGCATACCCTGTGTTCCAAAGATGAAATCCTTACGCCAACAGTACTGACTGAAAGAGCTCGTTTTTaGAACAGCTCTCGATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: QRHTLCSKDEILTPTVLTERARF*NSSRSL Trigger: GAGAGATCGAGAGCTGTTCAAAAAACGAGCTCTTTC...AGTCAGTACTGTTGGCGTAAGGATTTCATCTTTGGAACACAGGGTATGCCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS GCA 90 bp | ATTTTAGGATTGTTGACTAAAGCCTCCGTCATCAGCCACTGTTTCTaGTTGAGTCCGATGTCTAAGTGCTGTGTCTCATCCAGAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: ILGLLTKASVISHCF*LSPMSKCCVSSRIS Trigger: AGAGATTCTGGATGAGACACAGCACTTAGACATCGGACTCAAGCAGAAACAGTGGCTGATGACGGAGGCTTTAGTCAACAATCCTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | AACACCCATTCCTTCCCACTAGCCTGCTGGATGAAAAGAATGAGTCTGGTAACCTCAATTTTAGGATTGTaGACTAAAGCCTCCGTCATC | + |
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Preference number: 5 (lower is better) Translates to: NTHSFPLACWMKRMSLVTSILGL*TKASVI Trigger: GATGACGGAGGCTTTAGTCAACAATCCTAAAATTGA...GGTTACCAGACTCATTCTTTTCATCCAGCAGGCTAGTGGGAAGGAATGGGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | CAGAGGCATACCCTGTGTTCCAAAGATGAAATCCTTACGCCAACAGTACTGACTACTTCAATTTTAGGATaGTTGACTAAAGCCTCCGTC | + |
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Preference number: 5 (lower is better) Translates to: QRHTLCSKDEILTPTVLTTSILG*LTKASV Trigger: GACGGAGGCTTTAGTCAACAATCCTAAAATTGAAGT...AGTCAGTACTGTTGGCGTAAGGATTTCATCTTTGGAACACAGGGTATGCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | GGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGAGTGTCATATGGTCCCCTAAAGCCTaGACAGCTTTCTGGGAATTA | + |
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Preference number: 5 (lower is better) Translates to: GIQNHLEIKINSRHLSVIWSPKA*TAFWEL Trigger: TAATTCCCAGAAAGCTGTCAAGGCTTTAGGGGACCA...TATGACACTCAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | AGAAAACATGGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGACTTCAATTTTAGGATaGTTGACTAAAGCCTCCGTC | + |
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Preference number: 5 (lower is better) Translates to: RKHGIQNHLEIKINSRHLTSILG*LTKASV Trigger: GACGGAGGCTTTAGTCAACAATCCTAAAATTGAAGT...CAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCCATGTTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS-3UTR CAA 90 bp | AGAAAACATGGAATCCAGAACCATTTAGAAATCAAGATAAATAGCAGACACCTGAAGTTGTACTTAGGTTaGAAGGCATATTTCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: RKHGIQNHLEIKINSRHLKLYLG*KAYFPS Trigger: GGATGGGAAATATGCCTTCAAACCTAAGTACAACTT...CAGGTGTCTGCTATTTATCTTGATTTCTAAATGGTTCTGGATTCCATGTTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS CAA 72 bp | CGTTTTTCTACCACAGGAGTGGAAAGAGCTCGTTTTTaGAACAGCTCTCGATCTCTCAATAGGCTTGGATCC | + |
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Preference number: 6 (lower is better) Translates to: RFSTTGVERARF*NSSRSLNRLGS Trigger: GGATCCAAGCCTATTGAGAGATCGAGAGCTGTTCAAAAAACGAGCTCTTTCCACTCCTGTGGTAGAAAAACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 ENSMUST00000187392.7 ENSMUST00000190639.2 ENSMUST00000190675.2 |
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| CDS CAA 72 bp | AAGGCATATTTCCCATCCACTACTTCAATTTTAGGATaGTTGACTAAAGCCTCCGTCATCAGCCACTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: KAYFPSTTSILG*LTKASVISHCF Trigger: GAAACAGTGGCTGATGACGGAGGCTTTAGTCAACAATCCTAAAATTGAAGTAGTGGATGGGAAATATGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS CCA 72 bp | ATTTTCTTCTTATCAGGACGACTTACAAATAGTATCTaGTCCCCTAAAGCCTTGACAGCTTTCTGGGAATTA | + |
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Preference number: 6 (lower is better) Translates to: IFFLSGRLTNSI*SPKALTAFWEL Trigger: TAATTCCCAGAAAGCTGTCAAGGCTTTAGGGGACCAGATACTATTTGTAAGTCGTCCTGATAAGAAGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS CAA 90 bp | AAAAGCCTAAGCAGGGCCTTCTTATCTTTCAAGTTGTACTTAGGTTaGAAGGCATATTTCCCATCCACTACTTCAATTTTAGGATTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KSLSRAFLSFKLYLG*KAYFPSTTSILGLL Trigger: CAACAATCCTAAAATTGAAGTAGTGGATGGGAAATATGCCTTCAAACCTAAGTACAACTTGAAAGATAAGAAGGCCCTGCTTAGGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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| CDS CAA 72 bp | AGCAGGGCCTTCTTATCTTTCAAGTTGTACTTAGGTTaGAAGGCATATTTCCCATCCACTACTTCAATTTTA | + |
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Preference number: 6 (lower is better) Translates to: SRAFLSFKLYLG*KAYFPSTTSIL Trigger: TAAAATTGAAGTAGTGGATGGGAAATATGCCTTCAAACCTAAGTACAACTTGAAAGATAAGAAGGCCCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167264.8 ENSMUST00000170705.8 ENSMUST00000171010.8 |
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