Pregenerated sensors for GTF2E1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022828Ensembl transcript IDs: ENSMUST00000023525.9
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCTCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTaGTCAGTACTGGAAAGGCTCCTCAATTCAGAGCGCTGGCACAGG | + |
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Preference number: 1 (lower is better) Translates to: TSGRVRKVGESALLH*SVLERLLNSERWHR Trigger: CCTGTGCCAGCGCTCTGAATTGAGGAGCCTTTCCAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTGTAGAACAAGTGGGGGAAGTGGGGCCAGTCTCAGCTTTCCATCTGAGAGGAGTTTCTCTGCAATaGGCAGCAGCAGGGAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RSVEQVGEVGPVSAFHLRGVSLQ*AAAGRA Trigger: TGCTCTCCCTGCTGCTGCCCATTGCAGAGAAACTCC...TCTCAGATGGAAAGCTGAGACTGGCCCCACTTCCCCCACTTGTTCTACAGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTGGGTACTCCATTCCCCTAAGCAGTGACCTGCTTCTTGGTAAGCTGCTTATTGTCTCAGACGCCTaGCCACAGTGCAGCTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: VLGYSIPLSSDLLLGKLLIVSDA*PQCSCN Trigger: ATTGCAGCTGCACTGTGGTCAGGCGTCTGAGACAAT...AAGCAGCTTACCAAGAAGCAGGTCACTGCTTAGGGGAATGGAGTACCCAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGAACAAGTGGGGGAAGTaGGGCCAGTCTCAGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: SGRVRKVGESALLHCSVLNKWGK*GQSQLS Trigger: GGAAAGCTGAGACTGGCCCCACTTCCCCCACTTGTT...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR CAA 90 bp | TTCGTCAACCTGGATGCAGACTCCTTCCCTTCATGCATGTGCTCCTaGAATTTCTCCATGCGGGTAGACCTAACCTGCTTTGTTTATCTA | + |
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Preference number: 2 (lower is better) Translates to: FVNLDADSFPSCMCS*NFSMRVDLTCFVYL Trigger: TAGATAAACAAAGCAGGTTAGGTCTACCCGCATGGAGAAATTCAAGGAGCACATGCATGAAGGGAAGGAGTCTGCATCCAGGTTGACGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTTACATGGAAAGAGTGCTCATGGTAGGTATGCTCCAAGAAGTCAGAGCCAGAACCCAAAAGGTCTATaGGAAGGAAACAATCTACCG | + |
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Preference number: 2 (lower is better) Translates to: SLHGKSAHGRYAPRSQSQNPKGL*EGNNLP Trigger: CGGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTT...CTGGCTCTGACTTCTTGGAGCATACCTACCATGAGCACTCTTTCCATGTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTTACATGGAAAGAGTGCTCATGGTAGGTATGCTCCAAGAAGTCAGAGCCAGTCTCAGCTTTCCATCTaGGATTTCCAAATCACACTG | + |
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Preference number: 2 (lower is better) Translates to: SLHGKSAHGRYAPRSQSQSQLSI*DFQITL Trigger: CAGTGTGATTTGGAAATCTCAGATGGAAAGCTGAGA...CTGGCTCTGACTTCTTGGAGCATACCTACCATGAGCACTCTTTCCATGTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR GCA 90 bp | TTCAGGAATAACACCATGCTAATGACTATGTTCCTTGAGGTTACAATGCTCAACTTGAGGAAGATGAAGTaGTTGGGTACTCCATTCCCC | + |
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Preference number: 2 (lower is better) Translates to: FRNNTMLMTMFLEVTMLNLRKMK*LGTPFP Trigger: GGGGAATGGAGTACCCAAGCACTTCATCTTCCTCAA...GTTGAGCATTGTAACCTCAAGGAACATAGTCATTAGCATGGTGTTATTCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGAATAACACCATGCTAATGACTATGTTCCTTGAGGTTACAATGCTCAACGTAAGCTGCTTTGGTTaGCAGGATTATAAGCAATTG | + |
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Preference number: 2 (lower is better) Translates to: FRNNTMLMTMFLEVTMLNVSCFG*QDYKQL Trigger: CAATTGCTTATAATCCTGCCAACCAAAGCAGCTTAC...GTTGAGCATTGTAACCTCAAGGAACATAGTCATTAGCATGGTGTTATTCCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCTTTGCTCTCCTACTATaGTTCTGTGCTAGATTACCA | + |
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Preference number: 2 (lower is better) Translates to: LCLSKVQPKRSMRRKQSTFALLL*FCARLP Trigger: TGGTAATCTAGCACAGAAGCATAGTAGGAGAGCAAA...GGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCACCTACCTACCTTTCTaGGAAGTTTCTTACATTAAA | + |
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Preference number: 2 (lower is better) Translates to: LCLSKVQPKRSMRRKQSTTYLPF*EVSYIK Trigger: TTTAATGTAAGAAACTTCCCAGAAAGGTAGGTAGGT...GGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACAAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR CCA 72 bp | AAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTaGAAAGGCTCCTCAATTCAGAGCGCTGGCACAGGT | + |
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Preference number: 3 (lower is better) Translates to: KWGNQHFYTAQY*KGSSIQSAGTG Trigger: ACCTGTGCCAGCGCTCTGAATTGAGGAGCCTTTCCAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR CAA 90 bp | AGGTCTGTAGAACAAGTGGGGGAAGTGGGGCCAGTCTCAGCTTTCCATCTGAGAGGCCCACACTCAGTTTaGAGGAAGATGAAGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: RSVEQVGEVGPVSAFHLRGPHSV*RKMKCL Trigger: CAAGCACTTCATCTTCCTCAAAACTGAGTGTGGGCC...TCTCAGATGGAAAGCTGAGACTGGCCCCACTTCCCCCACTTGTTCTACAGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGGCAGTGACCTGCTTCTaGGTAAGCTGCTTTGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: SGRVRKVGESALLHCSVLAVTCF*VSCFGW Trigger: CCAACCAAAGCAGCTTACCAAGAAGCAGGTCACTGC...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR GCA 72 bp | GTCAACCTGGATGCAGACTCCTTCCCTTCATGCATGTaGTCCTTGAATTTCTCCATGCGGGTAGACCTAACC | + |
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Preference number: 3 (lower is better) Translates to: VNLDADSFPSCM*SLNFSMRVDLT Trigger: GGTTAGGTCTACCCGCATGGAGAAATTCAAGGAGCACATGCATGAAGGGAAGGAGTCTGCATCCAGGTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR GCA 72 bp | CCATTCGTCAACCTGGATGCAGACTCCTTCCCTTCATaGATGTGCTCCTTGAATTTCTCCATGCGGGTAGAC | + |
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Preference number: 3 (lower is better) Translates to: PFVNLDADSFPS*MCSLNFSMRVD Trigger: GTCTACCCGCATGGAGAAATTCAAGGAGCACATGCATGAAGGGAAGGAGTCTGCATCCAGGTTGACGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR GCA 72 bp | AGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTaGTCAGTACTGGAAAGGCTCCTCAATTCAGAGCGC | + |
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Preference number: 3 (lower is better) Translates to: RVRKVGESALLH*SVLERLLNSER Trigger: GCGCTCTGAATTGAGGAGCCTTTCCAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR CCA 72 bp | CCCCCTCTCCTGTACTCTCTCACTCCATTTACAGACTaGCCCACACTCAGTTTTGAGGAAGATGAAGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: PPLLYSLTPFTD*PTLSFEEDEVL Trigger: AAGCACTTCATCTTCCTCAAAACTGAGTGTGGGCCAGTCTGTAAATGGAGTGAGAGAGTACAGGAGAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR TCA 72 bp | TGCTTTGTTTATCTAAAGTACAACCCAAAAGGTCTATaGGAAGGAAACAATCTACCGGCCTTATGGGCTCTA | + |
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Preference number: 3 (lower is better) Translates to: CFVYLKYNPKGL*EGNNLPALWAL Trigger: TAGAGCCCATAAGGCCGGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | GTGCTTGGGTACTCCATTCCCCTAAGCAGTGACCTGCTTCTTGGTAAGCTGCTTGTCCACGCCTCTCGGTaGTGCCCACCTGCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VLGYSIPLSSDLLLGKLLVHASR*CPPARP Trigger: TGGCCTGGCAGGTGGGCACCACCGAGAGGCGTGGAC...AAGCAGCTTACCAAGAAGCAGGTCACTGCTTAGGGGAATGGAGTACCCAAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR TCA 90 bp | AGGTCTGTAGAACAAGTGGGGGAAGTGGGGCCAGTCTCAGCTTTCCATCTGAGAGCTTCCTCGCGCTCCTaGAATGTGTCCACATCGATG | + |
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Preference number: 4 (lower is better) Translates to: RSVEQVGEVGPVSAFHLRASSRS*NVSTSM Trigger: CATCGATGTGGACACATTTCAGGAGCGCGAGGAAGC...TCTCAGATGGAAAGCTGAGACTGGCCCCACTTCCCCCACTTGTTCTACAGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR GCA 90 bp | GTGCTTGGGTACTCCATTCCCCTAAGCAGTGACCTGCTTCTTGGTAAGCTGCTTTTGCTGCTCGGTCCTTaGTTTGCTTCAGTGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: VLGYSIPLSSDLLLGKLLLLLGP*FASVLG Trigger: TCCCAGCACTGAAGCAAAGCAAGGACCGAGCAGCAA...AAGCAGCTTACCAAGAAGCAGGTCACTGCTTAGGGGAATGGAGTACCCAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR GCA 90 bp | AGGTCTGTAGAACAAGTGGGGGAAGTGGGGCCAGTCTCAGCTTTCCATCTGAGAGCCCATGGCTATGTATaGTTCCTTCTCTTCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RSVEQVGEVGPVSAFHLRAHGYV*FLLFWG Trigger: ACCCCAGAAGAGAAGGAAGCATACATAGCCATGGGC...TCTCAGATGGAAAGCTGAGACTGGCCCCACTTCCCCCACTTGTTCTACAGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGTGCTTCCTTCTCTTCTaGGGTCATCTGGGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: SGRVRKVGESALLHCSVLCFLLF*GHLGHQ Trigger: CTGGTGGCCCAGATGACCCCAGAAGAGAAGGAAGCA...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | GTGCTTGGGTACTCCATTCCCCTAAGCAGTGACCTGCTTCTTGGTAAGCTGCTTGCTTTGCTTCAGTGCTaGGATTTCTGTGGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLGYSIPLSSDLLLGKLLALLQC*DFCGFW Trigger: CCAGAACCCACAGAAATCCCAGCACTGAAGCAAAGC...AAGCAGCTTACCAAGAAGCAGGTCACTGCTTAGGGGAATGGAGTACCCAAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | GTGCTTGGGTACTCCATTCCCCTAAGCAGTGACCTGCTTCTTGGTAAGCTGCTTCATCATCTGACTCGCTaGTCTCACTCTCAGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: VLGYSIPLSSDLLLGKLLHHLTR*SHSQSH Trigger: GTGACTCTGAGAGTGAGACCAGCGAGTCAGATGATG...AAGCAGCTTACCAAGAAGCAGGTCACTGCTTAGGGGAATGGAGTACCCAAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | AGGTCTGTAGAACAAGTGGGGGAAGTGGGGCCAGTCTCAGCTTTCCATCTGAGATCCTCAAACATACGCTaGCCCATGGCTATGTATGCT | + |
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Preference number: 4 (lower is better) Translates to: RSVEQVGEVGPVSAFHLRSSNIR*PMAMYA Trigger: AGCATACATAGCCATGGGCCAGCGTATGTTTGAGGA...TCTCAGATGGAAAGCTGAGACTGGCCCCACTTCCCCCACTTGTTCTACAGACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR GCA 90 bp | TCTTTACATGGAAAGAGTGCTCATGGTAGGTATGCTCCAAGAAGTCAGAGCCAGAGCTCCAGCAGCAGTTaGTGCTCGGTCCTTGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLHGKSAHGRYAPRSQSQSSSSS*CSVLAL Trigger: CAAAGCAAGGACCGAGCAGCAACTGCTGCTGGAGCT...CTGGCTCTGACTTCTTGGAGCATACCTACCATGAGCACTCTTTCCATGTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| 3UTR CAA 72 bp | CTCTCACTCCATTTACAGACTGGCCCACACTCAGTTTaGAGGAAGATGAAGTGCTTGGGTACTCCATTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSLHLQTGPHSV*RKMKCLGTPFP Trigger: GGGGAATGGAGTACCCAAGCACTTCATCTTCCTCAAAACTGAGTGTGGGCCAGTCTGTAAATGGAGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR TCA 90 bp | TCTTTACATGGAAAGAGTGCTCATGGTAGGTATGCTCCAAGAAGTCAGAGCCAGCATAAAAGCCCCGGATaGCATACTTGGCTAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SLHGKSAHGRYAPRSQSQHKSPG*HTWLAA Trigger: AGCGGCTAGCCAAGTATGTCATCCGGGGCTTTTATG...CTGGCTCTGACTTCTTGGAGCATACCTACCATGAGCACTCTTTCCATGTAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR GCA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGCTGTATGGCAAAAGGTaGAGCGGAAAGTTCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SGRVRKVGESALLHCSVLLYGKR*SGKFLS Trigger: TGACAGGAACTTTCCGCTGCACCTTTTGCCATACAG...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR GCA 90 bp | TTCAGGAATAACACCATGCTAATGACTATGTTCCTTGAGGTTACAATGCTCAACTGTCACCGGAGCGGCTaGTCCCACAGAGCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FRNNTMLMTMFLEVTMLNCHRSG*SHRASC Trigger: ACAGCTGGCTCTGTGGGAGCAGCCGCTCCGGTGACA...GTTGAGCATTGTAACCTCAAGGAACATAGTCATTAGCATGGTGTTATTCCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR TCA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGGAAGTCTTCTTCTCATaGATGAGTAGAGCTCGCATG | + |
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Preference number: 4 (lower is better) Translates to: SGRVRKVGESALLHCSVLEVFFS*MSRARM Trigger: CATGCGAGCTCTACTCATTCATGAGAAGAAGACTTC...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | GTGCTTGGGTACTCCATTCCCCTAAGCAGTGACCTGCTTCTTGGTAAGCTGCTTGTGCTGGGATTTCTGTaGGTTCTGGTTCAAGTATTT | + |
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Preference number: 4 (lower is better) Translates to: VLGYSIPLSSDLLLGKLLVLGFL*VLVQVF Trigger: AAATACTTGAACCAGAACCCACAGAAATCCCAGCAC...AAGCAGCTTACCAAGAAGCAGGTCACTGCTTAGGGGAATGGAGTACCCAAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | GTGCTTGGGTACTCCATTCCCCTAAGCAGTGACCTGCTTCTTGGTAAGCTGCTTATCCTTCTTCTCATGTaGTCCAGCTTATATTTCACT | + |
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Preference number: 4 (lower is better) Translates to: VLGYSIPLSSDLLLGKLLILLLM*SSLYFT Trigger: AGTGAAATATAAGCTGGACCACATGAGAAGAAGGAT...AAGCAGCTTACCAAGAAGCAGGTCACTGCTTAGGGGAATGGAGTACCCAAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR TCA 90 bp | TTCAGGAATAACACCATGCTAATGACTATGTTCCTTGAGGTTACAATGCTCAACGCTTCCGATCAAACTTaGGCAGCTCCAGCATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: FRNNTMLMTMFLEVTMLNASDQT*AAPACP Trigger: AGGACATGCTGGAGCTGCTCAAGTTTGATCGGAAGC...GTTGAGCATTGTAACCTCAAGGAACATAGTCATTAGCATGGTGTTATTCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR TCA 90 bp | TGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCGGCAGCAGACAGGACATTTaGAGGAAGCCCGATTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CLSKVQPKRSMRRKQSTGSRQDI*RKPDWW Trigger: CCACCAATCGGGCTTCCTTCAAATGTCCTGTCTGCT...GCCGGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR GCA 90 bp | TGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCGGCGGTGGTCTTCCCATCTaGAGCAGTCTCTACCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: CLSKVQPKRSMRRKQSTGGGLPI*SSLYPH Trigger: ATGAGGGTAGAGACTGCTGCAGATGGGAAGACCACC...GCCGGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR GCA 90 bp | TCTTTACATGGAAAGAGTGCTCATGGTAGGTATGCTCCAAGAAGTCAGAGCCAGTGTCTCCCGAAGCAATaGATAAATGGGCTCAATTTG | + |
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Preference number: 4 (lower is better) Translates to: SLHGKSAHGRYAPRSQSQCLPKQ*INGLNL Trigger: CAAATTGAGCCCATTTATGCATTGCTTCGGGAGACA...CTGGCTCTGACTTCTTGGAGCATACCTACCATGAGCACTCTTTCCATGTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | TTCAGGAATAACACCATGCTAATGACTATGTTCCTTGAGGTTACAATGCTCAACAGTAGTTATGGCGGGTaGTCTTCCCATCTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FRNNTMLMTMFLEVTMLNSSYGG*SSHLQQ Trigger: CTGCTGCAGATGGGAAGACCACCCGCCATAACTACT...GTTGAGCATTGTAACCTCAAGGAACATAGTCATTAGCATGGTGTTATTCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR TCA 90 bp | TCTTTACATGGAAAGAGTGCTCATGGTAGGTATGCTCCAAGAAGTCAGAGCCAGCGATGCACATCATCTTaGTCATCCATGTTAATGACA | + |
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Preference number: 4 (lower is better) Translates to: SLHGKSAHGRYAPRSQSQRCTSS*SSMLMT Trigger: TGTCATTAACATGGATGATCAAGATGATGTGCATCG...CTGGCTCTGACTTCTTGGAGCATACCTACCATGAGCACTCTTTCCATGTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR TCA 90 bp | CTTTGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCTGGCTTCTAGGTCAGTaGAAGTGCTGCAGCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: LCLSKVQPKRSMRRKQSTWLLGQ*KCCSRQ Trigger: CTGTCTGCTGCAGCACTTTCACTGACCTAGAAGCCA...GGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | TGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCGGCACATACGCTGGCCCATaGCTATGTATGCTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CLSKVQPKRSMRRKQSTGTYAGP*LCMLPS Trigger: AGAAGGAAGCATACATAGCCATGGGCCAGCGTATGT...GCCGGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | TTCAGGAATAACACCATGCTAATGACTATGTTCCTTGAGGTTACAATGCTCAACTTCACTGTAGGAAAATaGACAGCCAGCCACCATAAC | + |
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Preference number: 4 (lower is better) Translates to: FRNNTMLMTMFLEVTMLNFTVGK*TASHHN Trigger: GTTATGGTGGCTGGCTGTCCATTTTCCTACAGTGAA...GTTGAGCATTGTAACCTCAAGGAACATAGTCATTAGCATGGTGTTATTCCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR GCA 90 bp | TTCAGGAATAACACCATGCTAATGACTATGTTCCTTGAGGTTACAATGCTCAACTTGTTCATTAAATCTTaGCAAAAGCGTGCGAGCATC | + |
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Preference number: 4 (lower is better) Translates to: FRNNTMLMTMFLEVTMLNLFIKS*QKRASI Trigger: GATGCTCGCACGCTTTTGGCAAGATTTAATGAACAA...GTTGAGCATTGTAACCTCAAGGAACATAGTCATTAGCATGGTGTTATTCCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | CTTTGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCTCTTCTACCTCTGTATaGCAAAAGGTGCAGCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LCLSKVQPKRSMRRKQSTSSTSV*QKVQRK Trigger: TTTCCGCTGCACCTTTTGCCATACAGAGGTAGAAGA...GGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | CTTTGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCTCTCTCTCAACCAAATaGGTCTCTCTTTGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLSKVQPKRSMRRKQSTSLSTK*VSLWQL Trigger: AAGCTGCCAAAGAGAGACCCATTTGGTTGAGAGAGA...GGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS-3UTR GCA 90 bp | CTTTGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCAAAACGGATCGAAGTTaGTTCCGATCAAACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLSKVQPKRSMRRKQSTKTDRS*FRSNLS Trigger: GCTCAAGTTTGATCGGAAGCAACTTCGATCCGTTTT...GGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CCA 90 bp | CTTTGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCGGAAAGTTCCTGTCATaGGATCAAACAGTTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLSKVQPKRSMRRKQSTGKFLS*DQTVDW Trigger: CCAATCAACTGTTTGATCCCATGACAGGAACTTTCC...GGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 90 bp | ATACGAGGGGCCTTTGTTGGTCCACGCCTCTCGGTGGTGCCCACCTaGCAGGCCAGCAGCTCCAGCAGCAGTTGCTGCTCGGTCCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IRGAFVGPRLSVVPT*QASSSSSSCCSVLA Trigger: AGCAAGGACCGAGCAGCAACTGCTGCTGGAGCTGCTGGCCTGGCAGGTGGGCACCACCGAGAGGCGTGGACCAACAAAGGCCCCTCGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS TCA 90 bp | ATGAGGAGGAGCCGCAGCTGCTGGCCGAGGTGGAGAGTCATCATCTaGCTCGCTGGTCTCACTCTCAGAGTCACTGCCATTAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MRRSRSCWPRWRVII*LAGLTLRVTAISSC Trigger: ACAGCTGCTAATGGCAGTGACTCTGAGAGTGAGACCAGCGAGTCAGATGATGACTCTCCACCTCGGCCAGCAGCTGCGGCTCCTCCTCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 90 bp | CTCACTCTCAGAGTCACTGCCATTAGCAGCTGTCACCGGAGCGGCTaGTCCCACAGAGCCAGCTGTCACCGAGGAAGTCTTCTTCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LTLRVTAISSCHRSG*SHRASCHRGSLLLM Trigger: CATGAGAAGAAGACTTCCTCGGTGACAGCTGGCTCTGTGGGAGCAGCCGCTCCGGTGACAGCTGCTAATGGCAGTGACTCTGAGAGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS CCA 90 bp | CTGGGCCACCAGCTCCGGCCGCTGGCTAACTTCACTGTAGGAAAATaGACAGCCAGCCACCATAACAATGGGGTCATCTGCTACTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGHQLRPLANFTVGK*TASHHNNGVICYFL Trigger: GAGGAAGTAGCAGATGACCCCATTGTTATGGTGGCTGGCTGTCCATTTTCCTACAGTGAAGTTAGCCAGCGGCCGGAGCTGGTGGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS CCA 90 bp | CTCAAACATACGCTGGCCCATGGCTATGTATGCTTCCTTCTCTTCTaGGGTCATCTGGGCCACCAGCTCCGGCCGCTGGCTAACTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LKHTLAHGYVCFLLF*GHLGHQLRPLANFT Trigger: AGTGAAGTTAGCCAGCGGCCGGAGCTGGTGGCCCAGATGACCCCAGAAGAGAAGGAAGCATACATAGCCATGGGCCAGCGTATGTTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS TCA 90 bp | ACCTCCTCATTGTCATCAGGCCCCGCACGGGCTTCCTCGCGCTCCTaGAATGTGTCCACATCGATGCCACCTTCCTTCATCTCTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSSLSSGPARASSRS*NVSTSMPPSFISSE Trigger: TTCTGAAGAGATGAAGGAAGGTGGCATCGATGTGGACACATTTCAGGAGCGCGAGGAAGCCCGTGCGGGGCCTGATGACAATGAGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS GCA 90 bp | TCACTCAAAGAGATCCTCAAACATACGCTGGCCCATGGCTATGTATaGTTCCTTCTCTTCTGGGGTCATCTGGGCCACCAGCTCCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLKEILKHTLAHGYV*FLLFWGHLGHQLRP Trigger: CGGCCGGAGCTGGTGGCCCAGATGACCCCAGAAGAGAAGGAAGCATACATAGCCATGGGCCAGCGTATGTTTGAGGATCTCTTTGAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CAA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGCGCATGACCTCCTCATaGTCATCAGGCCCCGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: SGRVRKVGESALLHCSVLRMTSS*SSGPAR Trigger: CCGTGCGGGGCCTGATGACAATGAGGAGGTCATGCG...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CCA 90 bp | CTTCAGAACTGTATGCCCCTTGGACAGTGCTCTCTCTCAACCAAATaGGTCTCTCTTTGGCAGCTTTCCCTTCCAGCGAGGGGCGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQNCMPLGQCSLSTK*VSLWQLSLPARGDA Trigger: TGCATCGCCCCTCGCTGGAAGGGAAAGCTGCCAAAGAGAGACCCATTTGGTTGAGAGAGAGCACTGTCCAAGGGGCATACAGTTCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS-3UTR CAA 90 bp | GTGCTTGGGTACTCCATTCCCCTAAGCAGTGACCTGCTTCTTGGTAAGCTGCTTCCCCGGATGACATACTaGGCTAGCCGCTTCAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLGYSIPLSSDLLLGKLLPRMTY*ASRFNA Trigger: GGCATTGAAGCGGCTAGCCAAGTATGTCATCCGGGG...AAGCAGCTTACCAAGAAGCAGGTCACTGCTTAGGGGAATGGAGTACCCAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGTGCTTCCGATCAAACTaGAGCAGCTCCAGCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGRVRKVGESALLHCSVLCFRSN*SSSSMS Trigger: GGACATGCTGGAGCTGCTCAAGTTTGATCGGAAGCA...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CAA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGCAGCAGACAGGACATTaGAAGGAAGCCCGATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGRVRKVGESALLHCSVLQQTGH*KEARLV Trigger: CACCAATCGGGCTTCCTTCAAATGTCCTGTCTGCTG...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGTGCTCGGTCCTTGCTTaGCTTCAGTGCTGGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGRVRKVGESALLHCSVLCSVLA*LQCWDF Trigger: GAAATCCCAGCACTGAAGCAAAGCAAGGACCGAGCA...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 90 bp | TGCCACCTTCCTTCATCTCTTCAGAACTGTATGCCCCTTGGACAGTaGTCTCTCTCAACCAAATGGGTCTCTCTTTGGCAGCTTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CHLPSSLQNCMPLGQ*SLSTKWVSLWQLSL Trigger: AAGGGAAAGCTGCCAAAGAGAGACCCATTTGGTTGAGAGAGAGCACTGTCCAAGGGGCATACAGTTCTGAAGAGATGAAGGAAGGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CAA 90 bp | AGGTCTGTAGAACAAGTGGGGGAAGTGGGGCCAGTCTCAGCTTTCCATCTGAGAGTGCGAGCATCTTTTTaGGGCATTGCTGATTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RSVEQVGEVGPVSAFHLRVRASF*GIADSS Trigger: AGATGAATCAGCAATGCCCAAAAAAGATGCTCGCAC...TCTCAGATGGAAAGCTGAGACTGGCCCCACTTCCCCCACTTGTTCTACAGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 90 bp | GCGGTAATTGATGAAGTAGTAGTTATGGCGGGTGGTCTTCCCATCTaGAGCAGTCTCTACCCTCATTCTGCATTTGATGAACTTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVIDEVVVMAGGLPI*SSLYPHSAFDELVS Trigger: GGAGACAAGTTCATCAAATGCAGAATGAGGGTAGAGACTGCTGCAGATGGGAAGACCACCCGCCATAACTACTACTTCATCAATTACCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CCA 90 bp | CAGTTGCTGCTCGGTCCTTGCTTTGCTTCAGTGCTGGGATTTCTGTaGGTTCTGGTTCAAGTATTTCATAGGCCAAGTTTACATCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLLLGPCFASVLGFL*VLVQVFHRPSLHPL Trigger: CAGAGGATGTAAACTTGGCCTATGAAATACTTGAACCAGAACCCACAGAAATCCCAGCACTGAAGCAAAGCAAGGACCGAGCAGCAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CAA 90 bp | GTGCTTGGGTACTCCATTCCCCTAAGCAGTGACCTGCTTCTTGGTAAGCTGCTTACCCTCATTCTGCATTaGATGAACTTGTCTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLGYSIPLSSDLLLGKLLTLILH*MNLSPF Trigger: AAAGGGAGACAAGTTCATCAAATGCAGAATGAGGGT...AAGCAGCTTACCAAGAAGCAGGTCACTGCTTAGGGGAATGGAGTACCCAAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CAA 90 bp | TCTGGAAGAGTGAGGAAAGTGGGGGAATCAGCACTTCTACACTGCTCAGTACTGTTGAAGGAAGCCCGATaGGTGGAATTTCTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SGRVRKVGESALLHCSVLLKEAR*VEFLSS Trigger: AGATGAGAGAAATTCCACCAATCGGGCTTCCTTCAA...CAGTACTGAGCAGTGTAGAAGTGCTGATTCCCCCACTTTCCTCACTCTTCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CAA 90 bp | TTCAGGAATAACACCATGCTAATGACTATGTTCCTTGAGGTTACAATGCTCAACCAGCTCCAGCAGCAGTaGCTGCTCGGTCCTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FRNNTMLMTMFLEVTMLNQLQQQ*LLGPCF Trigger: AAAGCAAGGACCGAGCAGCAACTGCTGCTGGAGCTG...GTTGAGCATTGTAACCTCAAGGAACATAGTCATTAGCATGGTGTTATTCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 90 bp | TGGGCATTGCTGATTCATCTTCTTCTACCTCTGTATGGCAAAAGGTaGAGCGGAAAGTTCCTGTCATGGGATCAAACAGTTGATTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WALLIHLLLPLYGKR*SGKFLSWDQTVDWL Trigger: AAGCCAATCAACTGTTTGATCCCATGACAGGAACTTTCCGCTGCACCTTTTGCCATACAGAGGTAGAAGAAGATGAATCAGCAATGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CAA 90 bp | TGTTTATCTAAAGTACAACCCAAAAGGTCTATGAGAAGGAAACAATCTACCGGCCAAAACGGATCGAAGTaGCTTCCGATCAAACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLSKVQPKRSMRRKQSTGQNGSK*LPIKLE Trigger: CTCAAGTTTGATCGGAAGCAACTTCGATCCGTTTTG...GCCGGTAGATTGTTTCCTTCTCATAGACCTTTTGGGTTGTACTTTAGATAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 90 bp | TTGATGAACTTGTCTCCCTTTAAATTATTCAAAACGGATCGAAGTTaGTTCCGATCAAACTTGAGCAGCTCCAGCATGTCCTCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LMNLSPFKLFKTDRS*FRSNLSSSSMSSSF Trigger: AAAAGAAGAGGACATGCTGGAGCTGCTCAAGTTTGATCGGAAGCAACTTCGATCCGTTTTGAATAATTTAAAGGGAGACAAGTTCATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS-3UTR CAA 90 bp | TTCAGGAATAACACCATGCTAATGACTATGTTCCTTGAGGTTACAATGCTCAACGCGATGCACATCATCTaGATCATCCATGTTAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: FRNNTMLMTMFLEVTMLNAMHII*IIHVND Trigger: GTCATTAACATGGATGATCAAGATGATGTGCATCGC...GTTGAGCATTGTAACCTCAAGGAACATAGTCATTAGCATGGTGTTATTCCTGAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 72 bp | GCCTTTGTTGGTCCACGCCTCTCGGTGGTGCCCACCTaGCAGGCCAGCAGCTCCAGCAGCAGTTGCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AFVGPRLSVVPT*QASSSSSSCCS Trigger: CGAGCAGCAACTGCTGCTGGAGCTGCTGGCCTGGCAGGTGGGCACCACCGAGAGGCGTGGACCAACAAAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CCA 72 bp | ACGCTGGCCCATGGCTATGTATGCTTCCTTCTCTTCTaGGGTCATCTGGGCCACCAGCTCCGGCCGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TLAHGYVCFLLF*GHLGHQLRPLA Trigger: AGCCAGCGGCCGGAGCTGGTGGCCCAGATGACCCCAGAAGAGAAGGAAGCATACATAGCCATGGGCCAGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 72 bp | AGAGTCACTGCCATTAGCAGCTGTCACCGGAGCGGCTaGTCCCACAGAGCCAGCTGTCACCGAGGAAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RVTAISSCHRSG*SHRASCHRGSL Trigger: AAGACTTCCTCGGTGACAGCTGGCTCTGTGGGAGCAGCCGCTCCGGTGACAGCTGCTAATGGCAGTGACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CCA 72 bp | TCTGAGTATACAAGTCCTCATACGAGGGGCCTTTGTTaGTCCACGCCTCTCGGTGGTGCCCACCTGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SEYTSPHTRGLC*STPLGGAHLPG Trigger: GCCTGGCAGGTGGGCACCACCGAGAGGCGTGGACCAACAAAGGCCCCTCGTATGAGGACTTGTATACTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS TCA 72 bp | TTGTCATCAGGCCCCGCACGGGCTTCCTCGCGCTCCTaGAATGTGTCCACATCGATGCCACCTTCCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LSSGPARASSRS*NVSTSMPPSFI Trigger: GATGAAGGAAGGTGGCATCGATGTGGACACATTTCAGGAGCGCGAGGAAGCCCGTGCGGGGCCTGATGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CCA 72 bp | ATGGCTATGTATGCTTCCTTCTCTTCTGGGGTCATCTaGGCCACCAGCTCCGGCCGCTGGCTAACTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: MAMYASFSSGVI*ATSSGRWLTSL Trigger: CAGTGAAGTTAGCCAGCGGCCGGAGCTGGTGGCCCAGATGACCCCAGAAGAGAAGGAAGCATACATAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS TCA 72 bp | AGGCCAACACGTGCTCAATGCCATAAAAGCCCCGGATaGCATACTTGGCTAGCCGCTTCAATGCCGCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RPTRAQCHKSPG*HTWLAASMPPE Trigger: TTCCGGCGGCATTGAAGCGGCTAGCCAAGTATGTCATCCGGGGCTTTTATGGCATTGAGCACGTGTTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CCA 72 bp | CAGCTCCGGCCGCTGGCTAACTTCACTGTAGGAAAATaGACAGCCAGCCACCATAACAATGGGGTCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLRPLANFTVGK*TASHHNNGVIC Trigger: GCAGATGACCCCATTGTTATGGTGGCTGGCTGTCCATTTTCCTACAGTGAAGTTAGCCAGCGGCCGGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 72 bp | GAGATCCTCAAACATACGCTGGCCCATGGCTATGTATaGTTCCTTCTCTTCTGGGGTCATCTGGGCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: EILKHTLAHGYV*FLLFWGHLGHQ Trigger: CTGGTGGCCCAGATGACCCCAGAAGAGAAGGAAGCATACATAGCCATGGGCCAGCGTATGTTTGAGGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CAA 90 bp | CACATCGATGCCACCTTCCTTCATCTCTTCAGAACTGTATGCCCCTaGGACAGTGCTCTCTCTCAACCAAATGGGTCTCTCTTTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HIDATFLHLFRTVCP*DSALSQPNGSLFGS Trigger: GCTGCCAAAGAGAGACCCATTTGGTTGAGAGAGAGCACTGTCCAAGGGGCATACAGTTCTGAAGAGATGAAGGAAGGTGGCATCGATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CAA 72 bp | GCCACCTTCCTTCATCTCTTCAGAACTGTATGCCCCTaGGACAGTGCTCTCTCTCAACCAAATGGGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATFLHLFRTVCP*DSALSQPNGSL Trigger: GAGAGACCCATTTGGTTGAGAGAGAGCACTGTCCAAGGGGCATACAGTTCTGAAGAGATGAAGGAAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS TCA 72 bp | GTGCAGCGGAAAGTTCCTGTCATGGGATCAAACAGTTaGTTGGCTTCTAGGTCAGTGAAAGTGCTGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VQRKVPVMGSNS*LASRSVKVLQQ Trigger: CTGCTGCAGCACTTTCACTGACCTAGAAGCCAATCAACTGTTTGATCCCATGACAGGAACTTTCCGCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 72 bp | AGCAGCAGTTGCTGCTCGGTCCTTGCTTTGCTTCAGTaGTGGGATTTCTGTGGGTTCTGGTTCAAGTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCCSVLALLQ*WDFCGFWFKYF Trigger: GAAATACTTGAACCAGAACCCACAGAAATCCCAGCACTGAAGCAAAGCAAGGACCGAGCAGCAACTGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 72 bp | CCTTCATCTCTTCAGAACTGTATGCCCCTTGGACAGTaGTCTCTCTCAACCAAATGGGTCTCTCTTTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSSLQNCMPLGQ*SLSTKWVSLWQ Trigger: CTGCCAAAGAGAGACCCATTTGGTTGAGAGAGAGCACTGTCCAAGGGGCATACAGTTCTGAAGAGATGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 72 bp | GATGAAGTAGTAGTTATGGCGGGTGGTCTTCCCATCTaGAGCAGTCTCTACCCTCATTCTGCATTTGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: DEVVVMAGGLPI*SSLYPHSAFDE Trigger: TTCATCAAATGCAGAATGAGGGTAGAGACTGCTGCAGATGGGAAGACCACCCGCCATAACTACTACTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CCA 72 bp | TTGGGCATTGCTGATTCATCTTCTTCTACCTCTGTATaGCAAAAGGTGCAGCGGAAAGTTCCTGTCATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGIADSSSSTSV*QKVQRKVPVMG Trigger: TCCCATGACAGGAACTTTCCGCTGCACCTTTTGCCATACAGAGGTAGAAGAAGATGAATCAGCAATGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CCA 72 bp | CTCGGTCCTTGCTTTGCTTCAGTGCTGGGATTTCTGTaGGTTCTGGTTCAAGTATTTCATAGGCCAAGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LGPCFASVLGFL*VLVQVFHRPSL Trigger: TAAACTTGGCCTATGAAATACTTGAACCAGAACCCACAGAAATCCCAGCACTGAAGCAAAGCAAGGACCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS CAA 90 bp | CGGGTGGTCTTCCCATCTGCAGCAGTCTCTACCCTCATTCTGCATTaGATGAACTTGTCTCCCTTTAAATTATTCAAAACGGATCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RVVFPSAAVSTLILH*MNLSPFKLFKTDRS Trigger: ACTTCGATCCGTTTTGAATAATTTAAAGGGAGACAAGTTCATCAAATGCAGAATGAGGGTAGAGACTGCTGCAGATGGGAAGACCACCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS TCA 72 bp | TATTCAAAACGGATCGAAGTTGCTTCCGATCAAACTTaGGCAGCTCCAGCATGTCCTCTTCTTTTACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: YSKRIEVASDQT*AAPACPLLLHR Trigger: CCTGTGTAAAAGAAGAGGACATGCTGGAGCTGCTCAAGTTTGATCGGAAGCAACTTCGATCCGTTTTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
||
| CDS GCA 72 bp | CTGATTCATCTTCTTCTACCTCTGTATGGCAAAAGGTaGAGCGGAAAGTTCCTGTCATGGGATCAAACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LIHLLLPLYGKR*SGKFLSWDQTV Trigger: AACTGTTTGATCCCATGACAGGAACTTTCCGCTGCACCTTTTGCCATACAGAGGTAGAAGAAGATGAATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CAA 72 bp | AGCTTTCCCTTCCAGCGAGGGGCGATGCACATCATCTaGATCATCCATGTTAATGACAACATTCTGAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: SFPFQRGAMHII*IIHVNDNILSI Trigger: TATACTCAGAATGTTGTCATTAACATGGATGATCAAGATGATGTGCATCGCCCCTCGCTGGAAGGGAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS GCA 72 bp | TTGTCTCCCTTTAAATTATTCAAAACGGATCGAAGTTaGTTCCGATCAAACTTGAGCAGCTCCAGCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: LSPFKLFKTDRS*FRSNLSSSSMS Trigger: GGACATGCTGGAGCTGCTCAAGTTTGATCGGAAGCAACTTCGATCCGTTTTGAATAATTTAAAGGGAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CAA 72 bp | TTATTCAAAACGGATCGAAGTTGCTTCCGATCAAACTaGAGCAGCTCCAGCATGTCCTCTTCTTTTACACAG | + |
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Preference number: 6 (lower is better) Translates to: LFKTDRSCFRSN*SSSSMSSSFTQ Trigger: CTGTGTAAAAGAAGAGGACATGCTGGAGCTGCTCAAGTTTGATCGGAAGCAACTTCGATCCGTTTTGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CAA 90 bp | TTCCCATCTGCAGCAGTCTCTACCCTCATTCTGCATTTGATGAACTaGTCTCCCTTTAAATTATTCAAAACGGATCGAAGTTGCTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: FPSAAVSTLILHLMN*SPFKLFKTDRSCFR Trigger: TCGGAAGCAACTTCGATCCGTTTTGAATAATTTAAAGGGAGACAAGTTCATCAAATGCAGAATGAGGGTAGAGACTGCTGCAGATGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CAA 72 bp | GCAGCAGTCTCTACCCTCATTCTGCATTTGATGAACTaGTCTCCCTTTAAATTATTCAAAACGGATCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: AAVSTLILHLMN*SPFKLFKTDRS Trigger: ACTTCGATCCGTTTTGAATAATTTAAAGGGAGACAAGTTCATCAAATGCAGAATGAGGGTAGAGACTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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| CDS CAA 72 bp | TCATTAAATCTTGCCAAAAGCGTGCGAGCATCTTTTTaGGGCATTGCTGATTCATCTTCTTCTACCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: SLNLAKSVRASF*GIADSSSSTSV Trigger: TACAGAGGTAGAAGAAGATGAATCAGCAATGCCCAAAAAAGATGCTCGCACGCTTTTGGCAAGATTTAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023525.9 |
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