Pregenerated sensors for GTF2A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033543Ensembl transcript IDs: ENSMUST00000116552.8, ENSMUST00000118198.8, ENSMUST00000119413.8, ENSMUST00000119905.8, ENSMUST00000140265.8
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTCATTACGAGAACAGAGTCGCATGCTTCTCTCTGCGGGACCCTaGGTAGTAGATATAGCACAGTGTTGTCATTTCTGCACCGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: RSLREQSRMLLSAGP*VVDIAQCCHFCTVR Trigger: TCTCACGGTGCAGAAATGACAACACTGTGCTATATCTACTACCCAGGGTCCCGCAGAGAGAAGCATGCGACTCTGTTCTCGTAATGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| 3UTR GCA 90 bp | TGTGTACTAAAGGTCATTACGAGAACAGAGTCGCATGCTTCTCTCTaGGGGACCCTGGGTAGTAGATATAGCACAGTGTTGTCATTTCTG | + |
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Preference number: 1 (lower is better) Translates to: CVLKVITRTESHASL*GTLGSRYSTVLSFL Trigger: CAGAAATGACAACACTGTGCTATATCTACTACCCAGGGTCCCGCAGAGAGAAGCATGCGACTCTGTTCTCGTAATGACCTTTAGTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| 3UTR-3UTR GCA 90 bp | TACATTTCTTTATGCTGTGTACTAAAGGTCATTACGAGAACAGAGTCGCATGCTCAGTGTTGTCATTTCTaGACCGTGAGAATAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: YISLCCVLKVITRTESHAQCCHF*TVRINK Trigger: TTTATTTATTCTCACGGTGCAGAAATGACAACACTG...AGCATGCGACTCTGTTCTCGTAATGACCTTTAGTACACAGCATAAAGAAATGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| 3UTR CCA 72 bp | CGAGAACAGAGTCGCATGCTTCTCTCTGCGGGACCCTaGGTAGTAGATATAGCACAGTGTTGTCATTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: REQSRMLLSAGP*VVDIAQCCHFC Trigger: GCAGAAATGACAACACTGTGCTATATCTACTACCCAGGGTCCCGCAGAGAGAAGCATGCGACTCTGTTCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATGCTGTGTACTAAAGGTCATTACGAGAACAGAGTCGCATGCTTCTCTCTGGAGAGCCCTTCCATCTaGCAGCTAATACTTTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FMLCTKGHYENRVACFSLESPSI*QLILSG Trigger: GCCTGAAAGTATTAGCTGCAAGATGGAAGGGCTCTC...CAGAGAGAAGCATGCGACTCTGTTCTCGTAATGACCTTTAGTACACAGCATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140265.8 |
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| 3UTR-3UTR CAA 90 bp | ATTTCTTTATGCTGTGTACTAAAGGTCATTACGAGAACAGAGTCGCATGCTTCTAGATATAGCACAGTGTaGTCATTTCTGCACCGTGAG | + |
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Preference number: 3 (lower is better) Translates to: ISLCCVLKVITRTESHASRYSTV*SFLHRE Trigger: CTCACGGTGCAGAAATGACAACACTGTGCTATATCT...AGAAGCATGCGACTCTGTTCTCGTAATGACCTTTAGTACACAGCATAAAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| 3UTR-3UTR CAA 90 bp | TACATTTCTTTATGCTGTGTACTAAAGGTCATTACGAGAACAGAGTCGCATGCTAGATATAGCACAGTGTaGTCATTTCTGCACCGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: YISLCCVLKVITRTESHARYSTV*SFLHRE Trigger: CTCACGGTGCAGAAATGACAACACTGTGCTATATCT...AGCATGCGACTCTGTTCTCGTAATGACCTTTAGTACACAGCATAAAGAAATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| CDS-3UTR TCA 90 bp | TCTCTCTGCGGGACCCTGGGTAGTAGATATAGCACAGTGTTGTCATTTCTGCACGTAGTTGTGACCACCTaGCATAGGTGCTGGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCGTLGSRYSTVLSFLHVVVTT*HRCWEP Trigger: TGGTTCCCAGCACCTATGTCAGGTGGTCACAACTAC...GTGCAGAAATGACAACACTGTGCTATATCTACTACCCAGGGTCCCGCAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116552.8 |
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| CDS-3UTR TCA 90 bp | CTCTGCGGGACCCTGGGTAGTAGATATAGCACAGTGTTGTCATTTCTGCACCGTTCTGTTGAGACTGTATaGGCTCATCAAGGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCGTLGSRYSTVLSFLHRSVETV*AHQGSL Trigger: AAGAGAGCCTTGATGAGCTCATACAGTCTCAACAGA...ACGGTGCAGAAATGACAACACTGTGCTATATCTACTACCCAGGGTCCCGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| CDS-3UTR TCA 90 bp | ATGCTGTGTACTAAAGGTCATTACGAGAACAGAGTCGCATGCTTCTCTCTGCGGTCTGTTGAGACTGTATaGGCTCATCAAGGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLCTKGHYENRVACFSLRSVETV*AHQGSL Trigger: AAGAGAGCCTTGATGAGCTCATACAGTCTCAACAGA...CCGCAGAGAGAAGCATGCGACTCTGTTCTCGTAATGACCTTTAGTACACAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| CDS-3UTR TCA 90 bp | TTATGCTGTGTACTAAAGGTCATTACGAGAACAGAGTCGCATGCTTCTCTCTGCTCTGTTGAGACTGTATaGGCTCATCAAGGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LCCVLKVITRTESHASLCSVETV*AHQGSL Trigger: AAGAGAGCCTTGATGAGCTCATACAGTCTCAACAGA...GCAGAGAGAAGCATGCGACTCTGTTCTCGTAATGACCTTTAGTACACAGCATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| CDS-3UTR TCA 90 bp | CATTTCTTTATGCTGTGTACTAAAGGTCATTACGAGAACAGAGTCGCATGCTTCTCTGTTGAGACTGTATaGGCTCATCAAGGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HFFMLCTKGHYENRVACFSVETV*AHQGSL Trigger: AAGAGAGCCTTGATGAGCTCATACAGTCTCAACAGA...GAAGCATGCGACTCTGTTCTCGTAATGACCTTTAGTACACAGCATAAAGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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| CDS-3UTR TCA 90 bp | TACATTTCTTTATGCTGTGTACTAAAGGTCATTACGAGAACAGAGTCGCATGCTTCTGTTGAGACTGTATaGGCTCATCAAGGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: YISLCCVLKVITRTESHASVETV*AHQGSL Trigger: AAGAGAGCCTTGATGAGCTCATACAGTCTCAACAGA...AGCATGCGACTCTGTTCTCGTAATGACCTTTAGTACACAGCATAAAGAAATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000116552.8 ENSMUST00000118198.8 ENSMUST00000119413.8 ENSMUST00000119905.8 ENSMUST00000140265.8 |
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