Pregenerated sensors for GTF2A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020962Ensembl transcript IDs: ENSMUST00000021345.14, ENSMUST00000063314.7
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGAAGTGAGCTGTGTGAGCGAGAGTCCCTGCAGGTCCCAGGAGGCTaGCTCTTTGTTCTGTGGAGCCCCTTACAGGAACAGAGCTACACA | + |
Preference number: 1 (lower is better) Translates to: RSELCERESLQVPGG*LFVLWSPLQEQSYT Trigger: TGTGTAGCTCTGTTCCTGTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTGGGACCTGCAGGGACTCTCGCTCACACAGCTCACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CCA 90 bp | AGGTGCTACAGTTCCACGGCTTGCCGGTCTGAAGTAGTGTCTATGTaGTCAAGGCCTAGCTCTGCTCCAGGAGCTTTGCTTCTACTGCGC | + |
Preference number: 1 (lower is better) Translates to: RCYSSTACRSEVVSM*SRPSSAPGALLLLR Trigger: GCGCAGTAGAAGCAAAGCTCCTGGAGCAGAGCTAGGCCTTGACCACATAGACACTACTTCAGACCGGCAAGCCGTGGAACTGTAGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR TCA 90 bp | CACATCTCACGTGTGCTGTACAACTGCAGCTCCATGGGACCTTTGTaGGATGAAAACAGATTCCTGAGAGCCCATTTGGGGTTTCCTCTT | + |
Preference number: 1 (lower is better) Translates to: HISRVLYNCSSMGPL*DENRFLRAHLGFPL Trigger: AAGAGGAAACCCCAAATGGGCTCTCAGGAATCTGTTTTCATCTCACAAAGGTCCCATGGAGCTGCAGTTGTACAGCACACGTGAGATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR TCA 90 bp | AAAAGGTGCCGTCACTCTGGGTACACGTCGAAACGGATCAGTTTCTaGAGACACTGCTTGCGTCCCTGGTTCCACCTTTTGGATAAACTT | + |
Preference number: 1 (lower is better) Translates to: KRCRHSGYTSKRISF*RHCLRPWFHLLDKL Trigger: AAGTTTATCCAAAAGGTGGAACCAGGGACGCAAGCAGTGTCTTCAGAAACTGATCCGTTTCGACGTGTACCCAGAGTGACGGCACCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR TCA 90 bp | CTCACGTGTGCTGTACAACTGCAGCTCCATGGGACCTTTGTGAGATaGAAACAGATTCCTGAGAGCCCATTTGGGGTTTCCTCTTATAGA | + |
Preference number: 1 (lower is better) Translates to: LTCAVQLQLHGTFVR*KQIPESPFGVSSYR Trigger: TCTATAAGAGGAAACCCCAAATGGGCTCTCAGGAATCTGTTTTCATCTCACAAAGGTCCCATGGAGCTGCAGTTGTACAGCACACGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR CCA 90 bp | CACAGACTAGAGACTATACTGAGGGAGGGACAACTCAGCAACTCCTaGGATTCTGTTGTTCGCCAAGTTCTATACTTAAACCAGAACTGC | + |
Preference number: 1 (lower is better) Translates to: HRLETILREGQLSNS*DSVVRQVLYLNQNC Trigger: GCAGTTCTGGTTTAAGTATAGAACTTGGCGAACAACAGAATCCCAGGAGTTGCTGAGTTGTCCCTCCCTCAGTATAGTCTCTAGTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CCA 90 bp | GCATTTAACAAGCAGGAAAACCTAATTAAACCAAGCATCCATTCCTaGGTCAACTTCGTCTCCAAGCTGTGCCCATCGATCCTTTTCTTT | + |
Preference number: 1 (lower is better) Translates to: AFNKQENLIKPSIHS*VNFVSKLCPSILFF Trigger: AAAGAAAAGGATCGATGGGCACAGCTTGGAGACGAAGTTGACCCAGGAATGGATGCTTGGTTTAATTAGGTTTTCCTGCTTGTTAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR GCA 90 bp | ATTAAACCAAGCATCCATTCCTGGGTCAACTTCGTCTCCAAGCTGTaGCCATCGATCCTTTTCTTTAAATCTTACGTAGATGTTCAGACA | + |
Preference number: 1 (lower is better) Translates to: IKPSIHSWVNFVSKL*PSILFFKSYVDVQT Trigger: TGTCTGAACATCTACGTAAGATTTAAAGAAAAGGATCGATGGGCACAGCTTGGAGACGAAGTTGACCCAGGAATGGATGCTTGGTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR TCA 90 bp | TCTATCAAAAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTaGTTGAGCCCAACTTGGAGAAACAAATATAGACAAAGCTTTACA | + |
Preference number: 1 (lower is better) Translates to: SIKRVILRVIPTNIF*LSPTWRNKYRQSFT Trigger: TGTAAAGCTTTGTCTATATTTGTTTCTCCAAGTTGGGCTCAATCAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTTTTGATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR-3UTR GCA 90 bp | CAACAGCAGTCGACAATAGTAGCTCCGAACAGCTATGGCCGGCCCCTCCCACCCCAGGTCCCAGGAGGCTaGCTCTTTGTTCTGTGGAGC | + |
Preference number: 2 (lower is better) Translates to: QQQSTIVAPNSYGRPLPPQVPGG*LFVLWS Trigger: GCTCCACAGAACAAAGAGGCAGCCTCCTGGGACCTG...GGGTGGGAGGGGCCGGCCATAGCTGTTCGGAGCTACTATTGTCGACTGCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR TCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACGGGACCTTTGTGAGATaGAAACAGATTCCTGAGAGC | + |
Preference number: 2 (lower is better) Translates to: HTDSGTVSTHAAQKENLHGTFVR*KQIPES Trigger: GCTCTCAGGAATCTGTTTTCATCTCACAAAGGTCCC...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR-3UTR TCA 90 bp | CCAGGAGGCTGCCTCTTTGTTCTGTGGAGCCCCTTACAGGAACAGAGCTACACAGGGACCTTTGTGAGATaGAAACAGATTCCTGAGAGC | + |
Preference number: 2 (lower is better) Translates to: PGGCLFVLWSPLQEQSYTGTFVR*KQIPES Trigger: GCTCTCAGGAATCTGTTTTCATCTCACAAAGGTCCC...TGTGTAGCTCTGTTCCTGTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR GCA 90 bp | TGCAGGTCCCAGGAGGCTGCCTCTTTGTTCTGTGGAGCCCCTTACAGGAACAGATGCGCCTTTCTGACATaGAGAAGTGAAGTTTTGGCT | + |
Preference number: 2 (lower is better) Translates to: CRSQEAASLFCGAPYRNRCAFLT*RSEVLA Trigger: AGCCAAAACTTCACTTCTGCATGTCAGAAAGGCGCA...TCTGTTCCTGTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTGGGACCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR TCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACCCAACAAATATCTTCTaGTTGAGCCCAACTTGGAGA | + |
Preference number: 2 (lower is better) Translates to: HTDSGTVSTHAAQKENLHPTNIF*LSPTWR Trigger: TCTCCAAGTTGGGCTCAATCAGAAGATATTTGTTGG...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR-3UTR CCA 90 bp | CACACGCAGCCCAGAAGGAAAACCTCCACATCTCACGTGTGCTGTACAACTGCAGAAGTAGTGTCTATGTaGTCAAGGCCTAGCTCTGCT | + |
Preference number: 2 (lower is better) Translates to: HTQPRRKTSTSHVCCTTAEVVSM*SRPSSA Trigger: AGCAGAGCTAGGCCTTGACCACATAGACACTACTTC...TGCAGTTGTACAGCACACGTGAGATGTGGAGGTTTTCCTTCTGGGCTGCGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR-3UTR GCA 90 bp | GCAAGAGCTCATCTACTGAAAGGCACACACTTCCATGTTAGTCATCTATGTGAATCACTGGAGCAGCACTaGTGGGCTGCCATAGGTAGT | + |
Preference number: 2 (lower is better) Translates to: ARAHLLKGTHFHVSHLCESLEQH*WAAIGS Trigger: ACTACCTATGGCAGCCCAGCAGTGCTGCTCCAGTGA...TTCACATAGATGACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR TCA 90 bp | GCAAGAGCTCATCTACTGAAAGGCACACACTTCCATGTTAGTCATCTATGTGAAGGGAAGCGAGAGGTATaGGTACTGAGGAGAGTGACA | + |
Preference number: 2 (lower is better) Translates to: ARAHLLKGTHFHVSHLCEGKREV*VLRRVT Trigger: TGTCACTCTCCTCAGTACTCATACCTCTCGCTTCCC...TTCACATAGATGACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CAA 90 bp | CTGATATACAAGTCAAATCTCTGTATTTTCTTTCCAATGTGCAAATaGGAGCCCAAGTCTACATCACCAATGGCCTGGAAGGGCCACCCA | + |
Preference number: 2 (lower is better) Translates to: LIYKSNLCIFFPMCK*EPKSTSPMAWKGHP Trigger: TGGGTGGCCCTTCCAGGCCATTGGTGATGTAGACTTGGGCTCCAATTTGCACATTGGAAAGAAAATACAGAGATTTGACTTGTATATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR TCA 90 bp | GTTTCCTCTTATAGAGTGGGACTGAGCAGTTTTTCTGTACAGAAATTAAGCTGTGGGAAGCGAGAGGTATaGGTACTGAGGAGAGTGACA | + |
Preference number: 2 (lower is better) Translates to: VSSYRVGLSSFSVQKLSCGKREV*VLRRVT Trigger: TGTCACTCTCCTCAGTACTCATACCTCTCGCTTCCC...ACAGCTTAATTTCTGTACAGAAAAACTGCTCAGTCCCACTCTATAAGAGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR-3UTR CCA 90 bp | GCAAGAGCTCATCTACTGAAAGGCACACACTTCCATGTTAGTCATCTATGTGAAGAAGTAGTGTCTATGTaGTCAAGGCCTAGCTCTGCT | + |
Preference number: 2 (lower is better) Translates to: ARAHLLKGTHFHVSHLCEEVVSM*SRPSSA Trigger: AGCAGAGCTAGGCCTTGACCACATAGACACTACTTC...TTCACATAGATGACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR GCA 90 bp | TACTCAGTTGTCCATATACCAATGTCGCTGACTAGTAAGCAAAGCAAGCAACATAGAGGGAGACAACTCTaGATTCGTCCATACAAGCCA | + |
Preference number: 2 (lower is better) Translates to: YSVVHIPMSLTSKQSKQHRGRQL*IRPYKP Trigger: TGGCTTGTATGGACGAATGCAGAGTTGTCTCCCTCT...ATGTTGCTTGCTTTGCTTACTAGTCAGCGACATTGGTATATGGACAACTGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CAA 90 bp | GGTACAAATATAAATGGTCAGTTCCTGCTTCAAGACAAGCCCCCTTaGTGTCACTCTGAAAGAAGTGGTTGTTCATGTTTGACAATGTAC | + |
Preference number: 2 (lower is better) Translates to: GTNINGQFLLQDKPP*CHSERSGCSCLTMY Trigger: GTACATTGTCAAACATGAACAACCACTTCTTTCAGAGTGACACAAAGGGGGCTTGTCTTGAAGCAGGAACTGACCATTTATATTTGTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR TCA 90 bp | GCAAGAGCTCATCTACTGAAAGGCACACACTTCCATGTTAGTCATCTATGTGAACAAATATCTTCTGATTaGGCCCAACTTGGAGAAACA | + |
Preference number: 2 (lower is better) Translates to: ARAHLLKGTHFHVSHLCEQISSD*AQLGET Trigger: TGTTTCTCCAAGTTGGGCTCAATCAGAAGATATTTG...TTCACATAGATGACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR TCA 90 bp | TGTTTAATAAAAATCCAGTCCTCATCCGTTGCCCTTATGCTTAGACCAACGCACCAAATATCTTCTGATTaGGCCCAACTTGGAGAAACA | + |
Preference number: 2 (lower is better) Translates to: CLIKIQSSSVALMLRPTHQISSD*AQLGET Trigger: TGTTTCTCCAAGTTGGGCTCAATCAGAAGATATTTG...GTGCGTTGGTCTAAGCATAAGGGCAACGGATGAGGACTGGATTTTTATTAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR-3UTR CCA 90 bp | TACTCAGTTGTCCATATACCAATGTCGCTGACTAGTAAGCAAAGCAAGCAACATTGGTTTATTCAATGGTaGTTTGTTCTCCCCGCAAAC | + |
Preference number: 2 (lower is better) Translates to: YSVVHIPMSLTSKQSKQHWFIQW*FVLPAN Trigger: GTTTGCGGGGAGAACAAACCACCATTGAATAAACCA...ATGTTGCTTGCTTTGCTTACTAGTCAGCGACATTGGTATATGGACAACTGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR TCA 90 bp | TACTCAGTTGTCCATATACCAATGTCGCTGACTAGTAAGCAAAGCAAGCAACATACACCGCATGCTACTTaGTTTAAATGGAACACAACA | + |
Preference number: 2 (lower is better) Translates to: YSVVHIPMSLTSKQSKQHTPHAT*FKWNTT Trigger: TGTTGTGTTCCATTTAAATCAAGTAGCATGCGGTGT...ATGTTGCTTGCTTTGCTTACTAGTCAGCGACATTGGTATATGGACAACTGAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR GCA 90 bp | AGTTCAGTCTATCAAAAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGTGCGCCTTTCTGACATaGAGAAGTGAAGTTTTGGCT | + |
Preference number: 2 (lower is better) Translates to: SSVYQKGNSSGHSNKYLLCAFLT*RSEVLA Trigger: AGCCAAAACTTCACTTCTGCATGTCAGAAAGGCGCA...CAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTTTTGATAGACTGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR-3UTR CCA 90 bp | GCAAGAGCTCATCTACTGAAAGGCACACACTTCCATGTTAGTCATCTATGTGAAAGGTACAAATATAAATaGTCAGTTCCTGCTTCAAGA | + |
Preference number: 2 (lower is better) Translates to: ARAHLLKGTHFHVSHLCERYKYK*SVPASR Trigger: TCTTGAAGCAGGAACTGACCATTTATATTTGTACCT...TTCACATAGATGACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR GCA 72 bp | CCGCCCAGCAACCCCAGGTGCTACAGTTCCACGGCTTaGCGGTCTGAAGTAGTGTCTATGTGGTCAAGGCCT | + |
Preference number: 3 (lower is better) Translates to: PPSNPRCYSSTA*RSEVVSMWSRP Trigger: AGGCCTTGACCACATAGACACTACTTCAGACCGGCAAGCCGTGGAACTGTAGCACCTGGGGTTGCTGGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR GCA 72 bp | CTGTGTGAGCGAGAGTCCCTGCAGGTCCCAGGAGGCTaGCTCTTTGTTCTGTGGAGCCCCTTACAGGAACAG | + |
Preference number: 3 (lower is better) Translates to: LCERESLQVPGG*LFVLWSPLQEQ Trigger: CTGTTCCTGTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTGGGACCTGCAGGGACTCTCGCTCACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CCA 72 bp | ACAACAGCAGTCGACAATAGTAGCTCCGAACAGCTATaGCCGGCCCCTCCCACCCGGTGTAACCGATGCACA | + |
Preference number: 3 (lower is better) Translates to: TTAVDNSSSEQL*PAPPTRCNRCT Trigger: TGTGCATCGGTTACACCGGGTGGGAGGGGCCGGCCATAGCTGTTCGGAGCTACTATTGTCGACTGCTGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR CAA 90 bp | CACAGACTGTCATCCCAGGGCTCACACAGACTCGGGCACAGTAAGCACACACGCTCTGCTCCAGGAGCTTaGCTTCTACTGCGCCTTTCT | + |
Preference number: 3 (lower is better) Translates to: HRLSSQGSHRLGHSKHTRSAPGA*LLLRLS Trigger: AGAAAGGCGCAGTAGAAGCAAAGCTCCTGGAGCAGA...GCGTGTGTGCTTACTGTGCCCGAGTCTGTGTGAGCCCTGGGATGACAGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR GCA 72 bp | ACTAGAACAGAAGTGAGCTGTGTGAGCGAGAGTCCCTaGAGGTCCCAGGAGGCTGCCTCTTTGTTCTGTGGA | + |
Preference number: 3 (lower is better) Translates to: TRTEVSCVSESP*RSQEAASLFCG Trigger: TCCACAGAACAAAGAGGCAGCCTCCTGGGACCTGCAGGGACTCTCGCTCACACAGCTCACTTCTGTTCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR GCA 72 bp | ACGCAGCCCAGAAGGAAAACCTCCACATCTCACGTGTaGTGTACAACTGCAGCTCCATGGGACCTTTGTGAG | + |
Preference number: 3 (lower is better) Translates to: TQPRRKTSTSHV*CTTAAPWDLCE Trigger: CTCACAAAGGTCCCATGGAGCTGCAGTTGTACAGCACACGTGAGATGTGGAGGTTTTCCTTCTGGGCTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR GCA 72 bp | AAATGGAACACAACAGAACAGCACGTAAGAGCACAGTaGGGGGCTGCTGGAGCCACCTTTCAGAGCTTTCCC | + |
Preference number: 3 (lower is better) Translates to: KWNTTEQHVRAQ*GAAGATFQSFP Trigger: GGGAAAGCTCTGAAAGGTGGCTCCAGCAGCCCCGCACTGTGCTCTTACGTGCTGTTCTGTTGTGTTCCATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CCA 72 bp | AGTTCCACGGCTTGCCGGTCTGAAGTAGTGTCTATGTaGTCAAGGCCTAGCTCTGCTCCAGGAGCTTTGCTT | + |
Preference number: 3 (lower is better) Translates to: SSTACRSEVVSM*SRPSSAPGALL Trigger: AAGCAAAGCTCCTGGAGCAGAGCTAGGCCTTGACCACATAGACACTACTTCAGACCGGCAAGCCGTGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR TCA 72 bp | CGTCACTCTGGGTACACGTCGAAACGGATCAGTTTCTaGAGACACTGCTTGCGTCCCTGGTTCCACCTTTTG | + |
Preference number: 3 (lower is better) Translates to: RHSGYTSKRISF*RHCLRPWFHLL Trigger: CAAAAGGTGGAACCAGGGACGCAAGCAGTGTCTTCAGAAACTGATCCGTTTCGACGTGTACCCAGAGTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR CAA 90 bp | AATGACCACCAGGCAAGAGCTCATCTACTGAAAGGCACACACTTCCATGTTAGTCAGGAGGCTGCCTCTTaGTTCTGTGGAGCCCCTTAC | + |
Preference number: 3 (lower is better) Translates to: NDHQARAHLLKGTHFHVSQEAAS*FCGAPY Trigger: GTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTG...ACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGCCTGGTGGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR GCA 72 bp | GAAACTGCACGGGACAAAGTTGTGTCACTAAGAAAGTaGGTGTGTTCGCGGGCATTCCGGTGGTGTGAGAAT | + |
Preference number: 3 (lower is better) Translates to: ETARDKVVSLRK*VCSRAFRWCEN Trigger: ATTCTCACACCACCGGAATGCCCGCGAACACACGCACTTTCTTAGTGACACAACTTTGTCCCGTGCAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR CAA 90 bp | CACACGCAGCCCAGAAGGAAAACCTCCACATCTCACGTGTGCTGTACAACTGCATGCAGAAGTGAAGTTTaGGCTGATAGATGTCCCAAG | + |
Preference number: 3 (lower is better) Translates to: HTQPRRKTSTSHVCCTTACRSEV*ADRCPK Trigger: CTTGGGACATCTATCAGCCAAAACTTCACTTCTGCA...TGCAGTTGTACAGCACACGTGAGATGTGGAGGTTTTCCTTCTGGGCTGCGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR TCA 72 bp | GCTGTACAACTGCAGCTCCATGGGACCTTTGTGAGATaGAAACAGATTCCTGAGAGCCCATTTGGGGTTTCC | + |
Preference number: 3 (lower is better) Translates to: AVQLQLHGTFVR*KQIPESPFGVS Trigger: GGAAACCCCAAATGGGCTCTCAGGAATCTGTTTTCATCTCACAAAGGTCCCATGGAGCTGCAGTTGTACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR TCA 72 bp | CTCTGCTCCAGGAGCTTTGCTTCTACTGCGCCTTTCTaGCATGCAGAAGTGAAGTTTTGGCTGATAGATGTC | + |
Preference number: 3 (lower is better) Translates to: LCSRSFASTAPF*HAEVKFWLIDV Trigger: GACATCTATCAGCCAAAACTTCACTTCTGCATGTCAGAAAGGCGCAGTAGAAGCAAAGCTCCTGGAGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR-3UTR CAA 90 bp | ACATCTCACGTGTGCTGTACAACTGCAGCTCCATGGGACCTTTGTGAGATGAAATGCAGAAGTGAAGTTTaGGCTGATAGATGTCCCAAG | + |
Preference number: 3 (lower is better) Translates to: TSHVCCTTAAPWDLCEMKCRSEV*ADRCPK Trigger: CTTGGGACATCTATCAGCCAAAACTTCACTTCTGCA...TTTCATCTCACAAAGGTCCCATGGAGCTGCAGTTGTACAGCACACGTGAGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR GCA 72 bp | ACACGTCGAAACGGATCAGTTTCTGAAGACACTGCTTaGGTCCCTGGTTCCACCTTTTGGATAAACTTGCTA | + |
Preference number: 3 (lower is better) Translates to: TRRNGSVSEDTA*VPGSTFWINLL Trigger: TAGCAAGTTTATCCAAAAGGTGGAACCAGGGACGCAAGCAGTGTCTTCAGAAACTGATCCGTTTCGACGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CCA 72 bp | AAGCAGGAAAACCTAATTAAACCAAGCATCCATTCCTaGGTCAACTTCGTCTCCAAGCTGTGCCCATCGATC | + |
Preference number: 3 (lower is better) Translates to: KQENLIKPSIHS*VNFVSKLCPSI Trigger: GATCGATGGGCACAGCTTGGAGACGAAGTTGACCCAGGAATGGATGCTTGGTTTAATTAGGTTTTCCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR CCA 72 bp | GACCCCACCACTGATGCCAAATTTCACAACATAAATTaGTTCAGAAGGGTGCGAAGTGGGGAGGAGAAATCA | + |
Preference number: 3 (lower is better) Translates to: DPTTDAKFHNIN*FRRVRSGEEKS Trigger: TGATTTCTCCTCCCCACTTCGCACCCTTCTGAACCAATTTATGTTGTGAAATTTGGCATCAGTGGTGGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CCA 72 bp | GAGACTATACTGAGGGAGGGACAACTCAGCAACTCCTaGGATTCTGTTGTTCGCCAAGTTCTATACTTAAAC | + |
Preference number: 3 (lower is better) Translates to: ETILREGQLSNS*DSVVRQVLYLN Trigger: GTTTAAGTATAGAACTTGGCGAACAACAGAATCCCAGGAGTTGCTGAGTTGTCCCTCCCTCAGTATAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR TCA 72 bp | AAGGCACACACTTCCATGTTAGTCATCTATGTGAACTaGCCTTGGCACACTACTGGCATCGTGTCCTATAAA | + |
Preference number: 3 (lower is better) Translates to: KAHTSMLVIYVN*PWHTTGIVSYK Trigger: TTTATAGGACACGATGCCAGTAGTGTGCCAAGGTCAGTTCACATAGATGACTAACATGGAAGTGTGTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR CAA 90 bp | GCTTTACATGCTAATTACCAATGGCAGGTTCCTGTATTTAAAATCGACAGTTACTCTGCTCCAGGAGCTTaGCTTCTACTGCGCCTTTCT | + |
Preference number: 3 (lower is better) Translates to: ALHANYQWQVPVFKIDSYSAPGA*LLLRLS Trigger: AGAAAGGCGCAGTAGAAGCAAAGCTCCTGGAGCAGA...GTAACTGTCGATTTTAAATACAGGAACCTGCCATTGGTAATTAGCATGTAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
||
3UTR TCA 72 bp | TACGTAGATGTTCAGACAGCAGGGAAGCGAGAGGTATaGGTACTGAGGAGAGTGACAAGTAAAAATGTGTTT | + |
Preference number: 3 (lower is better) Translates to: YVDVQTAGKREV*VLRRVTSKNVF Trigger: AAACACATTTTTACTTGTCACTCTCCTCAGTACTCATACCTCTCGCTTCCCTGCTGTCTGAACATCTACGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
||
3UTR TCA 72 bp | AGAATACAAATGACCACCAGGCAAGAGCTCATCTACTaGAAGGCACACACTTCCATGTTAGTCATCTATGTG | + |
Preference number: 3 (lower is better) Translates to: RIQMTTRQELIY*KAHTSMLVIYV Trigger: CACATAGATGACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGCCTGGTGGTCATTTGTATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
||
3UTR CCA 72 bp | ATCATGCACCAAAGGAAGATAACAGAAGGGCAAAGGTaGGCTTCCAGGAGGAAGAATATAAACCAGAATAAT | + |
Preference number: 3 (lower is better) Translates to: IMHQRKITEGQR*ASRRKNINQNN Trigger: ATTATTCTGGTTTATATTCTTCCTCCTGGAAGCCCACCTTTGCCCTTCTGTTATCTTCCTTTGGTGCATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR-3UTR CAA 90 bp | TTTTACTCAGTTGTCCATATACCAATGTCGCTGACTAGTAAGCAAAGCAAGCAAACCCAAGTCTTTAAGTaGCATTTAACAAGCAGGAAA | + |
Preference number: 3 (lower is better) Translates to: FYSVVHIPMSLTSKQSKQTQVFK*HLTSRK Trigger: TTTCCTGCTTGTTAAATGCAACTTAAAGACTTGGGT...TTGCTTGCTTTGCTTACTAGTCAGCGACATTGGTATATGGACAACTGAGTAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
||
3UTR GCA 72 bp | TTTACATTTAGTTGGTGTGAATTTACCCATCCTAAATaGTTCTGTGCCTGGAATACAACTTTTGAAAGCGCT | + |
Preference number: 3 (lower is better) Translates to: FTFSWCEFTHPK*FCAWNTTFESA Trigger: AGCGCTTTCAAAAGTTGTATTCCAGGCACAGAAGCATTTAGGATGGGTAAATTCACACCAACTAAATGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR GCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACGGCTGGGCCTGTGGCTaGTGCTGTCCGGCTGCAGGC | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHGWACG*CCPAAG Trigger: GCCTGCAGCCGGACAGCAGCAGCCACAGGCCCAGCC...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
||
CDS-3UTR CCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACGGCAGGCTGGGCCTGTaGCTGCTGCTGTCCGGCTGC | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHGRLGL*LLLSGC Trigger: GCAGCCGGACAGCAGCAGCCACAGGCCCAGCCTGCC...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
||
CDS-3UTR GCA 90 bp | CACACGCAGCCCAGAAGGAAAACCTCCACATCTCACGTGTGCTGTACAACTGCAGGCTGGGCCTGTGGCTaGTGCTGTCCGGCTGCAGGC | + |
Preference number: 4 (lower is better) Translates to: HTQPRRKTSTSHVCCTTAGWACG*CCPAAG Trigger: GCCTGCAGCCGGACAGCAGCAGCCACAGGCCCAGCC...TGCAGTTGTACAGCACACGTGAGATGTGGAGGTTTTCCTTCTGGGCTGCGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
||
CDS-3UTR GCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACAGCACCAACGGAGCTTaGTGTTGGGCAGGCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHSTNGA*CWAGWA Trigger: GGCCCAGCCTGCCCAACAGCAAGCTCCGTTGGTGCT...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | CACAGACTGTCATCCCAGGGCTCACACAGACTCGGGCACAGTAAGCACACACGCCACTCCTGCAGGCAGTaGCAAGGTAGCAGCTGTAGC | + |
Preference number: 4 (lower is better) Translates to: HRLSSQGSHRLGHSKHTRHSCRQ*QGSSCS Trigger: GCTACAGCTGCTACCTTGGCACTGCCTGCAGGAGTG...GCGTGTGTGCTTACTGTGCCCGAGTCTGTGTGAGCCCTGGGATGACAGTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACCTGGGCACCATTGGCTaGTCTGACCACCTGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHLGTIG*SDHLKQ Trigger: CTGCTTCAGGTGGTCAGAGCAGCCAATGGTGCCCAG...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | CACACGCAGCCCAGAAGGAAAACCTCCACATCTCACGTGTGCTGTACAACTGCAAGCACCAACGGAGCTTaGTGTTGGGCAGGCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: HTQPRRKTSTSHVCCTTASTNGA*CWAGWA Trigger: GGCCCAGCCTGCCCAACAGCAAGCTCCGTTGGTGCT...TGCAGTTGTACAGCACACGTGAGATGTGGAGGTTTTCCTTCTGGGCTGCGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | CAACAGCAGTCGACAATAGTAGCTCCGAACAGCTATGGCCGGCCCCTCCCACCCGGCTCTTCTTCCACCTaGCCATCTTCAGCTCCATCT | + |
Preference number: 4 (lower is better) Translates to: QQQSTIVAPNSYGRPLPPGSSST*PSSAPS Trigger: AGATGGAGCTGAAGATGGGCAGGTGGAAGAAGAGCC...GGGTGGGAGGGGCCGGCCATAGCTGTTCGGAGCTACTATTGTCGACTGCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR TCA 90 bp | TGCAGGTCCCAGGAGGCTGCCTCTTTGTTCTGTGGAGCCCCTTACAGGAACAGAGCTGCTCTGACCACCTaGAGCAGCTGGCCTGAATTT | + |
Preference number: 4 (lower is better) Translates to: CRSQEAASLFCGAPYRNRAALTT*SSWPEF Trigger: AAATTCAGGCCAGCTGCTTCAGGTGGTCAGAGCAGC...TCTGTTCCTGTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTGGGACCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR GCA 90 bp | CACAGACTGTCATCCCAGGGCTCACACAGACTCGGGCACAGTAAGCACACACGCGTGTCAAAGAGTTCCTaGCCTTCCTCGTCACTGACG | + |
Preference number: 4 (lower is better) Translates to: HRLSSQGSHRLGHSKHTRVSKSS*PSSSLT Trigger: CGTCAGTGACGAGGAAGGGCAGGAACTCTTTGACAC...GCGTGTGTGCTTACTGTGCCCGAGTCTGTGTGAGCCCTGGGATGACAGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACTGTGGTGCTGTAGCTTaGTGGGATGCAGGAATGAGG | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHCGAVA*WDAGMR Trigger: CCTCATTCCTGCATCCCAGCAAGCTACAGCACCACA...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACAGTGGGGCTAAGACCTaGTGGATAACAGGAGCTTGG | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHSGAKT*WITGAW Trigger: CCAAGCTCCTGTTATCCAGCAGGTCTTAGCCCCACT...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACGTGTCAAAGAGTTCCTaGCCTTCCTCGTCACTGACG | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHVSKSS*PSSSLT Trigger: CGTCAGTGACGAGGAAGGGCAGGAACTCTTTGACAC...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CCA 90 bp | GCAAGAGCTCATCTACTGAAAGGCACACACTTCCATGTTAGTCATCTATGTGAAGGCAGGCTGGGCCTGTaGCTGCTGCTGTCCGGCTGC | + |
Preference number: 4 (lower is better) Translates to: ARAHLLKGTHFHVSHLCEGRLGL*LLLSGC Trigger: GCAGCCGGACAGCAGCAGCCACAGGCCCAGCCTGCC...TTCACATAGATGACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR TCA 90 bp | ACATCTCACGTGTGCTGTACAACTGCAGCTCCATGGGACCTTTGTGAGATGAAACGTCATCCTCGCTGTTaGGCGGCTCTTCTTCCACCT | + |
Preference number: 4 (lower is better) Translates to: TSHVCCTTAAPWDLCEMKRHPRC*AALLPP Trigger: AGGTGGAAGAAGAGCCGCTCAACAGCGAGGATGACG...TTTCATCTCACAAAGGTCCCATGGAGCTGCAGTTGTACAGCACACGTGAGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CCA 90 bp | TGCAGGTCCCAGGAGGCTGCCTCTTTGTTCTGTGGAGCCCCTTACAGGAACAGAAGGAACAATAACTTGTaGTGCTGTAGCTTGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: CRSQEAASLFCGAPYRNRRNNNL*CCSLLG Trigger: TCCCAGCAAGCTACAGCACCACAAGTTATTGTTCCT...TCTGTTCCTGTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTGGGACCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR TCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACAAGCTGCTGTTCTTCTaGATGAAATCCATCTACTGC | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHKLLFF*MKSIYC Trigger: GCAGTAGATGGATTTCATTCAGAAGAACAGCAGCTT...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR TCA 90 bp | AATGACCACCAGGCAAGAGCTCATCTACTGAAAGGCACACACTTCCATGTTAGTGACGCCTGTCTGTGGTaGAATCCCTCCAGGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: NDHQARAHLLKGTHFHVSDACLW*NPSRKW Trigger: CCACTTCCTGGAGGGATTTCACCACAGACAGGCGTC...ACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGCCTGGTGGTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR GCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACCCTGTAAATAAGATTTaGTGTGGCTGGATGATGACG | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHPVNKI*CGWMMT Trigger: CGTCATCATCCAGCCACAGCAAATCTTATTTACAGG...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | ACATCTCACGTGTGCTGTACAACTGCAGCTCCATGGGACCTTTGTGAGATGAAATGTAGCTTGCTGGGATaGAGGAATGAGGACCTGCTG | + |
Preference number: 4 (lower is better) Translates to: TSHVCCTTAAPWDLCEMKCSLLG*RNEDLL Trigger: CAGCAGGTCCTCATTCCTGCATCCCAGCAAGCTACA...TTTCATCTCACAAAGGTCCCATGGAGCTGCAGTTGTACAGCACACGTGAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | CCAGGAGGCTGCCTCTTTGTTCTGTGGAGCCCCTTACAGGAACAGAGCTACACACCTGTAAATAAGATTTaGTGTGGCTGGATGATGACG | + |
Preference number: 4 (lower is better) Translates to: PGGCLFVLWSPLQEQSYTPVNKI*CGWMMT Trigger: CGTCATCATCCAGCCACAGCAAATCTTATTTACAGG...TGTGTAGCTCTGTTCCTGTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR GCA 90 bp | TGTTTAATAAAAATCCAGTCCTCATCCGTTGCCCTTATGCTTAGACCAACGCACCTGGGCACCATTGGCTaGTCTGACCACCTGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: CLIKIQSSSVALMLRPTHLGTIG*SDHLKQ Trigger: CTGCTTCAGGTGGTCAGAGCAGCCAATGGTGCCCAG...GTGCGTTGGTCTAAGCATAAGGGCAACGGATGAGGACTGGATTTTTATTAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CCA 90 bp | CACACAGACTCGGGCACAGTAAGCACACACGCAGCCCAGAAGGAAAACCTCCACTGTATCTTATCATACTaGCAGACGACAACATTCTCA | + |
Preference number: 4 (lower is better) Translates to: HTDSGTVSTHAAQKENLHCILSY*QTTTFS Trigger: TGAGAATGTTGTCGTCTGCCAGTATGATAAGATACA...GTGGAGGTTTTCCTTCTGGGCTGCGTGTGTGCTTACTGTGCCCGAGTCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | TGTTTAATAAAAATCCAGTCCTCATCCGTTGCCCTTATGCTTAGACCAACGCACGACCTGCTGGGTCTGTaGTTGCTGAGGTACCGTTTG | + |
Preference number: 4 (lower is better) Translates to: CLIKIQSSSVALMLRPTHDLLGL*LLRYRL Trigger: CAAACGGTACCTCAGCAAGCACAGACCCAGCAGGTC...GTGCGTTGGTCTAAGCATAAGGGCAACGGATGAGGACTGGATTTTTATTAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR TCA 90 bp | GTTTCCTCTTATAGAGTGGGACTGAGCAGTTTTTCTGTACAGAAATTAAGCTGTCGTCATCCTCGCTGTTaGGCGGCTCTTCTTCCACCT | + |
Preference number: 4 (lower is better) Translates to: VSSYRVGLSSFSVQKLSCRHPRC*AALLPP Trigger: AGGTGGAAGAAGAGCCGCTCAACAGCGAGGATGACG...ACAGCTTAATTTCTGTACAGAAAAACTGCTCAGTCCCACTCTATAAGAGGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | TGTTTAATAAAAATCCAGTCCTCATCCGTTGCCCTTATGCTTAGACCAACGCACGGCTCTTCTTCCACCTaGCCATCTTCAGCTCCATCT | + |
Preference number: 4 (lower is better) Translates to: CLIKIQSSSVALMLRPTHGSSST*PSSAPS Trigger: AGATGGAGCTGAAGATGGGCAGGTGGAAGAAGAGCC...GTGCGTTGGTCTAAGCATAAGGGCAACGGATGAGGACTGGATTTTTATTAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR TCA 90 bp | AGTTCAGTCTATCAAAAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGGACGCCTGTCTGTGGTaGAATCCCTCCAGGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: SSVYQKGNSSGHSNKYLLDACLW*NPSRKW Trigger: CCACTTCCTGGAGGGATTTCACCACAGACAGGCGTC...CAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTTTTGATAGACTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | AGTTCAGTCTATCAAAAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGGACCTGCTGGGTCTGTaGTTGCTGAGGTACCGTTTG | + |
Preference number: 4 (lower is better) Translates to: SSVYQKGNSSGHSNKYLLDLLGL*LLRYRL Trigger: CAAACGGTACCTCAGCAAGCACAGACCCAGCAGGTC...CAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTTTTGATAGACTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CCA 90 bp | TTTTACTCAGTTGTCCATATACCAATGTCGCTGACTAGTAAGCAAAGCAAGCAAGGCTGCAAGATATACTaGGCACCATTGGCTGCTCTG | + |
Preference number: 4 (lower is better) Translates to: FYSVVHIPMSLTSKQSKQGCKIY*APLAAL Trigger: CAGAGCAGCCAATGGTGCCCAGTATATCTTGCAGCC...TTGCTTGCTTTGCTTACTAGTCAGCGACATTGGTATATGGACAACTGAGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR CCA 90 bp | TTTTACTCAGTTGTCCATATACCAATGTCGCTGACTAGTAAGCAAAGCAAGCAAGGGGCTAAGACCTGCTaGATAACAGGAGCTTGGACT | + |
Preference number: 4 (lower is better) Translates to: FYSVVHIPMSLTSKQSKQGAKTC*ITGAWT Trigger: AGTCCAAGCTCCTGTTATCCAGCAGGTCTTAGCCCC...TTGCTTGCTTTGCTTACTAGTCAGCGACATTGGTATATGGACAACTGAGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR TCA 90 bp | TATTCAATGGTGGTTTGTTCTCCCCGCAAACGGGAGGAAACTTTTATTCTTCAATTTGTTAGTAGCTGTTaGACCGGAGTCACTCCTGCA | + |
Preference number: 4 (lower is better) Translates to: YSMVVCSPRKREETFILQFVSSC*TGVTPA Trigger: TGCAGGAGTGACTCCGGTTCAACAGCTACTAACAAA...TTGAAGAATAAAAGTTTCCTCCCGTTTGCGGGGAGAACAAACCACCATTGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR GCA 90 bp | GTGAAGTTTTGGCTGATAGATGTCCCAAGTTTCAAACCGTCCATTTTAACTTTTTGTGGTGCTGTAGCTTaGTGGGATGCAGGAATGAGG | + |
Preference number: 4 (lower is better) Translates to: VKFWLIDVPSFKPSILTFCGAVA*WDAGMR Trigger: CCTCATTCCTGCATCCCAGCAAGCTACAGCACCACA...AAAAGTTAAAATGGACGGTTTGAAACTTGGGACATCTATCAGCCAAAACTTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | GTGAAGTTTTGGCTGATAGATGTCCCAAGTTTCAAACCGTCCATTTTAACTTTTAGTGGGGCTAAGACCTaGTGGATAACAGGAGCTTGG | + |
Preference number: 4 (lower is better) Translates to: VKFWLIDVPSFKPSILTFSGAKT*WITGAW Trigger: CCAAGCTCCTGTTATCCAGCAGGTCTTAGCCCCACT...AAAAGTTAAAATGGACGGTTTGAAACTTGGGACATCTATCAGCCAAAACTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CCA 90 bp | AGTTCAGTCTATCAAAAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGGGCTGCAAGATATACTaGGCACCATTGGCTGCTCTG | + |
Preference number: 4 (lower is better) Translates to: SSVYQKGNSSGHSNKYLLGCKIY*APLAAL Trigger: CAGAGCAGCCAATGGTGCCCAGTATATCTTGCAGCC...CAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTTTTGATAGACTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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3UTR CAA 72 bp | ATAAATGGTCAGTTCCTGCTTCAAGACAAGCCCCCTTaGTGTCACTCTGAAAGAAGTGGTTGTTCATGTTTG | + |
Preference number: 4 (lower is better) Translates to: INGQFLLQDKPP*CHSERSGCSCL Trigger: CAAACATGAACAACCACTTCTTTCAGAGTGACACAAAGGGGGCTTGTCTTGAAGCAGGAACTGACCATTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CAA 72 bp | ACAAACGCCTCATATAAATATCCCCTCCTATCCTGTTaGACTCTAGAAACTGCACGGGACAAAGTTGTGTCA | + |
Preference number: 4 (lower is better) Translates to: TNASYKYPLLSC*TLETARDKVVS Trigger: TGACACAACTTTGTCCCGTGCAGTTTCTAGAGTCAAACAGGATAGGAGGGGATATTTATATGAGGCGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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3UTR CAA 72 bp | AAGTCAAATCTCTGTATTTTCTTTCCAATGTGCAAATaGGAGCCCAAGTCTACATCACCAATGGCCTGGAAG | + |
Preference number: 4 (lower is better) Translates to: KSNLCIFFPMCK*EPKSTSPMAWK Trigger: CTTCCAGGCCATTGGTGATGTAGACTTGGGCTCCAATTTGCACATTGGAAAGAAAATACAGAGATTTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR TCA 90 bp | AGTTCAGTCTATCAAAAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGTTTGTTAGTAGCTGTTaGACCGGAGTCACTCCTGCA | + |
Preference number: 4 (lower is better) Translates to: SSVYQKGNSSGHSNKYLLFVSSC*TGVTPA Trigger: TGCAGGAGTGACTCCGGTTCAACAGCTACTAACAAA...CAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTTTTGATAGACTGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | TATTCAATGGTGGTTTGTTCTCCCCGCAAACGGGAGGAAACTTTTATTCTTCAATCTACTGCCCTAGACTaGATTAGTTTATTCTCCCAC | + |
Preference number: 4 (lower is better) Translates to: YSMVVCSPRKREETFILQSTALD*ISLFSH Trigger: GTGGGAGAATAAACTAATGCAGTCTAGGGCAGTAGA...TTGAAGAATAAAAGTTTCCTCCCGTTTGCGGGGAGAACAAACCACCATTGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR CCA 90 bp | GCTTTACATGCTAATTACCAATGGCAGGTTCCTGTATTTAAAATCGACAGTTACAAGATTTGCTGTGGCTaGATGATGACGCCTGTCTGT | + |
Preference number: 4 (lower is better) Translates to: ALHANYQWQVPVFKIDSYKICCG*MMTPVC Trigger: ACAGACAGGCGTCATCATCCAGCCACAGCAAATCTT...GTAACTGTCGATTTTAAATACAGGAACCTGCCATTGGTAATTAGCATGTAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CCA 90 bp | GTGAAGTTTTGGCTGATAGATGTCCCAAGTTTCAAACCGTCCATTTTAACTTTTAAGATTTGCTGTGGCTaGATGATGACGCCTGTCTGT | + |
Preference number: 4 (lower is better) Translates to: VKFWLIDVPSFKPSILTFKICCG*MMTPVC Trigger: ACAGACAGGCGTCATCATCCAGCCACAGCAAATCTT...AAAAGTTAAAATGGACGGTTTGAAACTTGGGACATCTATCAGCCAAAACTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR TCA 90 bp | TGTTTAATAAAAATCCAGTCCTCATCCGTTGCCCTTATGCTTAGACCAACGCACGTTGTAGGAATGACCTaGGTCTTATTTCCTGTAAAT | + |
Preference number: 4 (lower is better) Translates to: CLIKIQSSSVALMLRPTHVVGMT*VLFPVN Trigger: ATTTACAGGAAATAAGACTCAGGTCATTCCTACAAC...GTGCGTTGGTCTAAGCATAAGGGCAACGGATGAGGACTGGATTTTTATTAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CCA 90 bp | GCTTTACATGCTAATTACCAATGGCAGGTTCCTGTATTTAAAATCGACAGTTACAGGAACAATAACTTGTaGTGCTGTAGCTTGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: ALHANYQWQVPVFKIDSYRNNNL*CCSLLG Trigger: TCCCAGCAAGCTACAGCACCACAAGTTATTGTTCCT...GTAACTGTCGATTTTAAATACAGGAACCTGCCATTGGTAATTAGCATGTAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR TCA 90 bp | TCTTATAGAGTGGGACTGAGCAGTTTTTCTGTACAGAAATTAAGCTGTCACTTTAAGCTGCTGTTCTTCTaGATGAAATCCATCTACTGC | + |
Preference number: 4 (lower is better) Translates to: SYRVGLSSFSVQKLSCHFKLLFF*MKSIYC Trigger: GCAGTAGATGGATTTCATTCAGAAGAACAGCAGCTT...AAAGTGACAGCTTAATTTCTGTACAGAAAAACTGCTCAGTCCCACTCTATAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR GCA 90 bp | GCTTTACATGCTAATTACCAATGGCAGGTTCCTGTATTTAAAATCGACAGTTACTCTACTGCCCTAGACTaGATTAGTTTATTCTCCCAC | + |
Preference number: 4 (lower is better) Translates to: ALHANYQWQVPVFKIDSYSTALD*ISLFSH Trigger: GTGGGAGAATAAACTAATGCAGTCTAGGGCAGTAGA...GTAACTGTCGATTTTAAATACAGGAACCTGCCATTGGTAATTAGCATGTAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CCA 90 bp | GTTTCCTCTTATAGAGTGGGACTGAGCAGTTTTTCTGTACAGAAATTAAGCTGTTGTATCTTATCATACTaGCAGACGACAACATTCTCA | + |
Preference number: 4 (lower is better) Translates to: VSSYRVGLSSFSVQKLSCCILSY*QTTTFS Trigger: TGAGAATGTTGTCGTCTGCCAGTATGATAAGATACA...ACAGCTTAATTTCTGTACAGAAAAACTGCTCAGTCCCACTCTATAAGAGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR TCA 90 bp | GTGAAGTTTTGGCTGATAGATGTCCCAAGTTTCAAACCGTCCATTTTAACTTTTGTTGTAGGAATGACCTaGGTCTTATTTCCTGTAAAT | + |
Preference number: 4 (lower is better) Translates to: VKFWLIDVPSFKPSILTFVVGMT*VLFPVN Trigger: ATTTACAGGAAATAAGACTCAGGTCATTCCTACAAC...AAAAGTTAAAATGGACGGTTTGAAACTTGGGACATCTATCAGCCAAAACTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS GCA 90 bp | TGCAGCACCAACGGAGCTTGCTGTTGGGCAGGCTGGGCCTGTGGCTaGTGCTGTCCGGCTGCAGGCATCGGCGCTTGTGCCGGGGCGGGT | + |
Preference number: 5 (lower is better) Translates to: CSTNGACCWAGWACG*CCPAAGIGACAGAG Trigger: ACCCGCCCCGGCACAAGCGCCGATGCCTGCAGCCGGACAGCAGCAGCCACAGGCCCAGCCTGCCCAACAGCAAGCTCCGTTGGTGCTGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | CAACAGCAGTCGACAATAGTAGCTCCGAACAGCTATGGCCGGCCCCTCCCACCCTTGCTGAGGTTGCGCTaGCTGGTGCTGGTGGTGGTG | + |
Preference number: 5 (lower is better) Translates to: QQQSTIVAPNSYGRPLPPLLRLR*LVLVVV Trigger: CACCACCACCAGCACCAGCAAGCGCAACCTCAGCAA...GGGTGGGAGGGGCCGGCCATAGCTGTTCGGAGCTACTATTGTCGACTGCTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR CAA 90 bp | CACAGACTGTCATCCCAGGGCTCACACAGACTCGGGCACAGTAAGCACACACGCTTGCTGAGGTTGCGCTaGCTGGTGCTGGTGGTGGTG | + |
Preference number: 5 (lower is better) Translates to: HRLSSQGSHRLGHSKHTRLLRLR*LVLVVV Trigger: CACCACCACCAGCACCAGCAAGCGCAACCTCAGCAA...GCGTGTGTGCTTACTGTGCCCGAGTCTGTGTGAGCCCTGGGATGACAGTCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | CAACAGCAGTCGACAATAGTAGCTCCGAACAGCTATGGCCGGCCCCTCCCACCCTACCGTTTGCTGAGGTaGCGCTTGCTGGTGCTGGTG | + |
Preference number: 5 (lower is better) Translates to: QQQSTIVAPNSYGRPLPPYRLLR*RLLVLV Trigger: CACCAGCACCAGCAAGCGCAACCTCAGCAAACGGTA...GGGTGGGAGGGGCCGGCCATAGCTGTTCGGAGCTACTATTGTCGACTGCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS GCA 90 bp | TGCTGTAGCTTGCTGGGATGCAGGAATGAGGACCTGCTGGGTCTGTaGTTGCTGAGGTACCGTTTGCTGAGGTTGCGCTTGCTGGTGCTG | + |
Preference number: 5 (lower is better) Translates to: CCSLLGCRNEDLLGL*LLRYRLLRLRLLVL Trigger: CAGCACCAGCAAGCGCAACCTCAGCAAACGGTACCTCAGCAAGCACAGACCCAGCAGGTCCTCATTCCTGCATCCCAGCAAGCTACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | TGCAGGTCCCAGGAGGCTGCCTCTTTGTTCTGTGGAGCCCCTTACAGGAACAGACTGCTGGGTCTGTGCTaGCTGAGGTACCGTTTGCTG | + |
Preference number: 5 (lower is better) Translates to: CRSQEAASLFCGAPYRNRLLGLC*LRYRLL Trigger: CAGCAAACGGTACCTCAGCAAGCACAGACCCAGCAG...TCTGTTCCTGTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTGGGACCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS GCA 90 bp | TCATCTTCATCTTCCTCAGAAGATGTATCCCCTGTTCCATCAACTTaGAGCACCAACGGAGCTTGCTGTTGGGCAGGCTGGGCCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: SSSSSSEDVSPVPST*STNGACCWAGWACG Trigger: GCCACAGGCCCAGCCTGCCCAACAGCAAGCTCCGTTGGTGCTGCAAGTTGATGGAACAGGGGATACATCTTCTGAGGAAGATGAAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS TCA 90 bp | GGCGCTTGTGCCGGGGCGGGTGCTGCCACTGTTGTAGGAATGACCTaGGTCTTATTTCCTGTAAATAAGATTTGCTGTGGCTGGATGATG | + |
Preference number: 5 (lower is better) Translates to: GACAGAGAATVVGMT*VLFPVNKICCGWMM Trigger: CATCATCCAGCCACAGCAAATCTTATTTACAGGAAATAAGACTCAGGTCATTCCTACAACAGTGGCAGCACCCGCCCCGGCACAAGCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | TGCAGGTCCCAGGAGGCTGCCTCTTTGTTCTGTGGAGCCCCTTACAGGAACAGAATCAGGAACAATAACTaGTGGTGCTGTAGCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: CRSQEAASLFCGAPYRNRIRNNN*WCCSLL Trigger: CAGCAAGCTACAGCACCACAAGTTATTGTTCCTGAT...TCTGTTCCTGTAAGGGGCTCCACAGAACAAAGAGGCAGCCTCCTGGGACCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS TCA 90 bp | CTGACTGCTGAGGCTGCAAGATATACTGGGCACCATTGGCTGCTCTaGCCACCTGAAGCAGCTGGCCTGAATTTGTTAGTAGCTGTTGAA | + |
Preference number: 5 (lower is better) Translates to: LTAEAARYTGHHWLL*PPEAAGLNLLVAVE Trigger: TTCAACAGCTACTAACAAATTCAGGCCAGCTGCTTCAGGTGGTCAGAGCAGCCAATGGTGCCCAGTATATCTTGCAGCCTCAGCAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | AAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGATTGAGCCCAACTTGCAACGGAGCTTGCTGTaGGGCAGGCTGGGCCTGTGG | + |
Preference number: 5 (lower is better) Translates to: KGNSSGHSNKYLLIEPNLQRSLL*GRLGLW Trigger: CCACAGGCCCAGCCTGCCCAACAGCAAGCTCCGTTG...CAAGTTGGGCTCAATCAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | CACACGCAGCCCAGAAGGAAAACCTCCACATCTCACGTGTGCTGTACAACTGCATCCACCAGGCTGCATTaGTGGTATAACTTGTTGTTG | + |
Preference number: 5 (lower is better) Translates to: HTQPRRKTSTSHVCCTTASTRLH*WYNLLL Trigger: CAACAACAAGTTATACCACAAATGCAGCCTGGTGGA...TGCAGTTGTACAGCACACGTGAGATGTGGAGGTTTTCCTTCTGGGCTGCGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | AGTTCAGTCTATCAAAAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGCAACGGAGCTTGCTGTaGGGCAGGCTGGGCCTGTGG | + |
Preference number: 5 (lower is better) Translates to: SSVYQKGNSSGHSNKYLLQRSLL*GRLGLW Trigger: CCACAGGCCCAGCCTGCCCAACAGCAAGCTCCGTTG...CAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTTTTGATAGACTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | AAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGATTGAGCCCAACTTGCTGCTGGGTCTGTGCTaGCTGAGGTACCGTTTGCTG | + |
Preference number: 5 (lower is better) Translates to: KGNSSGHSNKYLLIEPNLLLGLC*LRYRLL Trigger: CAGCAAACGGTACCTCAGCAAGCACAGACCCAGCAG...CAAGTTGGGCTCAATCAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | AAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGATTGAGCCCAACTTGACGTCATCCTCGCTGTaGAGCGGCTCTTCTTCCACC | + |
Preference number: 5 (lower is better) Translates to: KGNSSGHSNKYLLIEPNLTSSSL*SGSSST Trigger: GGTGGAAGAAGAGCCGCTCAACAGCGAGGATGACGT...CAAGTTGGGCTCAATCAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | AATGACCACCAGGCAAGAGCTCATCTACTGAAAGGCACACACTTCCATGTTAGTATGCTGCTGCTGAACTaGCAACAAAAGCTGCTGTTC | + |
Preference number: 5 (lower is better) Translates to: NDHQARAHLLKGTHFHVSMLLLN*QQKLLF Trigger: GAACAGCAGCTTTTGTTGCAAGTTCAGCAGCAGCAT...ACTAACATGGAAGTGTGTGCCTTTCAGTAGATGAGCTCTTGCCTGGTGGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021345.14 |
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CDS-3UTR CAA 90 bp | ACATCTCACGTGTGCTGTACAACTGCAGCTCCATGGGACCTTTGTGAGATGAAATCCACCAGGCTGCATTaGTGGTATAACTTGTTGTTG | + |
Preference number: 5 (lower is better) Translates to: TSHVCCTTAAPWDLCEMKSTRLH*WYNLLL Trigger: CAACAACAAGTTATACCACAAATGCAGCCTGGTGGA...TTTCATCTCACAAAGGTCCCATGGAGCTGCAGTTGTACAGCACACGTGAGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | GTTTCCTCTTATAGAGTGGGACTGAGCAGTTTTTCTGTACAGAAATTAAGCTGTTTGCTGAGGTACCGTTaGCTGAGGTTGCGCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: VSSYRVGLSSFSVQKLSCLLRYR*LRLRLL Trigger: CAGCAAGCGCAACCTCAGCAAACGGTACCTCAGCAA...ACAGCTTAATTTCTGTACAGAAAAACTGCTCAGTCCCACTCTATAAGAGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | AAGGGTAATTCTTCGGGTCATTCCAACAAATATCTTCTGATTGAGCCCAACTTGTTGTGGTGCTGTAGCTaGCTGGGATGCAGGAATGAG | + |
Preference number: 5 (lower is better) Translates to: KGNSSGHSNKYLLIEPNLLWCCS*LGCRNE Trigger: CTCATTCCTGCATCCCAGCAAGCTACAGCACCACAA...CAAGTTGGGCTCAATCAGAAGATATTTGTTGGAATGACCCGAAGAATTACCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | TCTTATAGAGTGGGACTGAGCAGTTTTTCTGTACAGAAATTAAGCTGTCACTTTTTGCTGAGGTACCGTTaGCTGAGGTTGCGCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: SYRVGLSSFSVQKLSCHFLLRYR*LRLRLL Trigger: CAGCAAGCGCAACCTCAGCAAACGGTACCTCAGCAA...AAAGTGACAGCTTAATTTCTGTACAGAAAAACTGCTCAGTCCCACTCTATAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | GCTTTACATGCTAATTACCAATGGCAGGTTCCTGTATTTAAAATCGACAGTTACTTGTGGTGCTGTAGCTaGCTGGGATGCAGGAATGAG | + |
Preference number: 5 (lower is better) Translates to: ALHANYQWQVPVFKIDSYLWCCS*LGCRNE Trigger: CTCATTCCTGCATCCCAGCAAGCTACAGCACCACAA...GTAACTGTCGATTTTAAATACAGGAACCTGCCATTGGTAATTAGCATGTAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | GTTTCCTCTTATAGAGTGGGACTGAGCAGTTTTTCTGTACAGAAATTAAGCTGTATGCTGCTGCTGAACTaGCAACAAAAGCTGCTGTTC | + |
Preference number: 5 (lower is better) Translates to: VSSYRVGLSSFSVQKLSCMLLLN*QQKLLF Trigger: GAACAGCAGCTTTTGTTGCAAGTTCAGCAGCAGCAT...ACAGCTTAATTTCTGTACAGAAAAACTGCTCAGTCCCACTCTATAAGAGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS-3UTR CAA 90 bp | GTGAAGTTTTGGCTGATAGATGTCCCAAGTTTCAAACCGTCCATTTTAACTTTTATCAGGAACAATAACTaGTGGTGCTGTAGCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: VKFWLIDVPSFKPSILTFIRNNN*WCCSLL Trigger: CAGCAAGCTACAGCACCACAAGTTATTGTTCCTGAT...AAAAGTTAAAATGGACGGTTTGAAACTTGGGACATCTATCAGCCAAAACTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS CAA 72 bp | CTGTGGCTGCTGCTGTCCGGCTGCAGGCATCGGCGCTaGTGCCGGGGCGGGTGCTGCCACTGTTGTAGGAAT | + |
Preference number: 6 (lower is better) Translates to: LWLLLSGCRHRR*CRGGCCHCCRN Trigger: ATTCCTACAACAGTGGCAGCACCCGCCCCGGCACAAGCGCCGATGCCTGCAGCCGGACAGCAGCAGCCACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS CAA 90 bp | CTGCTGGGTCTGTGCTTGCTGAGGTACCGTTTGCTGAGGTTGCGCTaGCTGGTGCTGGTGGTGGTGGTGGTGATGCTGCTGCTGCTGGGG | + |
Preference number: 6 (lower is better) Translates to: LLGLCLLRYRLLRLR*LVLVVVVVMLLLLG Trigger: CCCCAGCAGCAGCAGCATCACCACCACCACCACCAGCACCAGCAAGCGCAACCTCAGCAAACGGTACCTCAGCAAGCACAGACCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS CAA 90 bp | GAGGACCTGCTGGGTCTGTGCTTGCTGAGGTACCGTTTGCTGAGGTaGCGCTTGCTGGTGCTGGTGGTGGTGGTGGTGATGCTGCTGCTG | + |
Preference number: 6 (lower is better) Translates to: EDLLGLCLLRYRLLR*RLLVLVVVVVMLLL Trigger: CAGCAGCAGCATCACCACCACCACCACCAGCACCAGCAAGCGCAACCTCAGCAAACGGTACCTCAGCAAGCACAGACCCAGCAGGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS GCA 72 bp | GGCTGCAGGCATCGGCGCTTGTGCCGGGGCGGGTGCTaGCACTGTTGTAGGAATGACCTGAGTCTTATTTCC | + |
Preference number: 6 (lower is better) Translates to: GCRHRRLCRGGC*HCCRNDLSLIS Trigger: GGAAATAAGACTCAGGTCATTCCTACAACAGTGGCAGCACCCGCCCCGGCACAAGCGCCGATGCCTGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS GCA 72 bp | TCCGGCTGCAGGCATCGGCGCTTGTGCCGGGGCGGGTaGTGCCACTGTTGTAGGAATGACCTGAGTCTTATT | + |
Preference number: 6 (lower is better) Translates to: SGCRHRRLCRGG*CHCCRNDLSLI Trigger: AATAAGACTCAGGTCATTCCTACAACAGTGGCAGCACCCGCCCCGGCACAAGCGCCGATGCCTGCAGCCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS CAA 72 bp | GAGGACCTGCTGGGTCTGTGCTTGCTGAGGTACCGTTaGCTGAGGTTGCGCTTGCTGGTGCTGGTGGTGGTG | + |
Preference number: 6 (lower is better) Translates to: EDLLGLCLLRYR*LRLRLLVLVVV Trigger: CACCACCACCAGCACCAGCAAGCGCAACCTCAGCAAACGGTACCTCAGCAAGCACAGACCCAGCAGGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS CAA 72 bp | CTGTGCTTGCTGAGGTACCGTTTGCTGAGGTTGCGCTaGCTGGTGCTGGTGGTGGTGGTGGTGATGCTGCTG | + |
Preference number: 6 (lower is better) Translates to: LCLLRYRLLRLR*LVLVVVVVMLL Trigger: CAGCAGCATCACCACCACCACCACCAGCACCAGCAAGCGCAACCTCAGCAAACGGTACCTCAGCAAGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS CAA 90 bp | TGTAGCTTGCTGGGATGCAGGAATGAGGACCTGCTGGGTCTGTGCTaGCTGAGGTACCGTTTGCTGAGGTTGCGCTTGCTGGTGCTGGTG | + |
Preference number: 6 (lower is better) Translates to: CSLLGCRNEDLLGLC*LRYRLLRLRLLVLV Trigger: CACCAGCACCAGCAAGCGCAACCTCAGCAAACGGTACCTCAGCAAGCACAGACCCAGCAGGTCCTCATTCCTGCATCCCAGCAAGCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS GCA 72 bp | TTGCTGGGATGCAGGAATGAGGACCTGCTGGGTCTGTaGTTGCTGAGGTACCGTTTGCTGAGGTTGCGCTTG | + |
Preference number: 6 (lower is better) Translates to: LLGCRNEDLLGL*LLRYRLLRLRL Trigger: CAAGCGCAACCTCAGCAAACGGTACCTCAGCAAGCACAGACCCAGCAGGTCCTCATTCCTGCATCCCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS GCA 72 bp | TGGCAGACGACAACATTCTCAGTGTCAAAGAGTTCCTaGCCTTCCTCGTCACTGACGTCATCCTCGCTGTTG | + |
Preference number: 6 (lower is better) Translates to: WQTTTFSVSKSS*PSSSLTSSSLL Trigger: CAACAGCGAGGATGACGTCAGTGACGAGGAAGGGCAGGAACTCTTTGACACTGAGAATGTTGTCGTCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS CAA 72 bp | ATCTTCCTCAGAAGATGTATCCCCTGTTCCATCAACTaGCAGCACCAACGGAGCTTGCTGTTGGGCAGGCTG | + |
Preference number: 6 (lower is better) Translates to: IFLRRCIPCSIN*QHQRSLLLGRL Trigger: CAGCCTGCCCAACAGCAAGCTCCGTTGGTGCTGCAAGTTGATGGAACAGGGGATACATCTTCTGAGGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |
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CDS TCA 72 bp | GCCGGGGCGGGTGCTGCCACTGTTGTAGGAATGACCTaGGTCTTATTTCCTGTAAATAAGATTTGCTGTGGC | + |
Preference number: 6 (lower is better) Translates to: AGAGAATVVGMT*VLFPVNKICCG Trigger: GCCACAGCAAATCTTATTTACAGGAAATAAGACTCAGGTCATTCCTACAACAGTGGCAGCACCCGCCCCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021345.14 ENSMUST00000063314.7 |