Pregenerated sensors for GSTZ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021033Ensembl transcript IDs: ENSMUST00000063117.10, ENSMUST00000220574.2, ENSMUST00000222222.2, ENSMUST00000222885.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTCTGGGCCCCAGGATCCTCTGCCTAGGGAATGGTGCCATCCATaGTGGGTGCCATCCCACCTCAATGGTACCAATATAACCCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: SSGPQDPLPREWCHP*WVPSHLNGTNITPN Trigger: GTTGGGGGTTATATTGGTACCATTGAGGTGGGATGGCACCCAGCATGGATGGCACCATTCCCTAGGCAGAGGATCCTGGGGCCCAGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR TCA 90 bp | AGGTGTGGCCTTCTTGGAGGACGTTGTGTCTCTGGGGGTGGGCTTTaGGGTTTCAGATTGCTCACAGCAGGCCCAGTGTCACTCTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: RCGLLGGRCVSGGGL*GFRLLTAGPVSLFL Trigger: CAAGAAGAGTGACACTGGGCCTGCTGTGAGCAATCTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAAGAAGGCCACACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR GCA 90 bp | TTGGAGGACGTTGTGTCTCTGGGGGTGGGCTTTGAGGTTTCAGATTaGTCACAGCAGGCCCAGTGTCACTCTTCTTGCTGCCTTTGGATC | + |
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Preference number: 1 (lower is better) Translates to: LEDVVSLGVGFEVSD*SQQAQCHSSCCLWI Trigger: GATCCAAAGGCAGCAAGAAGAGTGACACTGGGCCTGCTGTGAGCAATCTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR CCA 90 bp | AAGTCAAGACATCAGCGTGAGCAGCTGATCATAATGCACGTGTGGTaGTTGCTCCACTCCTTCTCTACTCTTCTGGGCCCCAGGATCCTC | + |
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Preference number: 1 (lower is better) Translates to: KSRHQREQLIIMHVW*LLHSFSTLLGPRIL Trigger: GAGGATCCTGGGGCCCAGAAGAGTAGAGAAGGAGTGGAGCAACCACCACACGTGCATTATGATCAGCTGCTCACGCTGATGTCTTGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR TCA 90 bp | TTTCAGGGTATAGTCCATAATGGCAGGGAAGTCAAGACATCAGCGTaGGCAGCTGATCATAATGCACGTGTGGTGGTTGCTCCACTCCTT | + |
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Preference number: 1 (lower is better) Translates to: FQGIVHNGREVKTSA*AADHNARVVVAPLL Trigger: AAGGAGTGGAGCAACCACCACACGTGCATTATGATCAGCTGCTCACGCTGATGTCTTGACTTCCCTGCCATTATGGACTATACCCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR CCA 90 bp | TGTAAGCTAATTGAACGTCTTTCTTTGTCAGAGTTGCCATGGTCATaGTGTCTCTTCACAGCAGTAGAACACCCAGCATCTGGGCCTACT | + |
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Preference number: 1 (lower is better) Translates to: CKLIERLSLSELPWS*CLFTAVEHPASGPT Trigger: AGTAGGCCCAGATGCTGGGTGTTCTACTGCTGTGAAGAGACACCATGACCATGGCAACTCTGACAAAGAAAGACGTTCAATTAGCTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR TCA 90 bp | TTTATAAAGGCCCTTCTCCCTGGTGATTCTAGCTTTATTTCAAGTTaGCAATTAACATTAGCCGGTGAGAGCTGGTCATGTCTCTGCCTA | + |
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Preference number: 1 (lower is better) Translates to: FIKALLPGDSSFISS*QLTLAGESWSCLCL Trigger: TAGGCAGAGACATGACCAGCTCTCACCGGCTAATGTTAATTGTCAACTTGAAATAAAGCTAGAATCACCAGGGAGAAGGGCCTTTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR CAA 90 bp | GAGGTGTGGCCTTCTTGGAGGACGTTGTGTCTCTGGGGGTGGGCTTaGAGGTTTCAGATTGCTCACAGCAGGCCCAGTGTCACTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: EVWPSWRTLCLWGWA*RFQIAHSRPSVTLL Trigger: AAGAAGAGTGACACTGGGCCTGCTGTGAGCAATCTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAAGAAGGCCACACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR CAA 90 bp | TCAAGACATCAGCGTGAGCAGCTGATCATAATGCACGTGTGGTGGTaGCTCCACTCCTTCTCTACTCTTCTGGGCCCCAGGATCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SRHQREQLIIMHVWW*LHSFSTLLGPRILC Trigger: GCAGAGGATCCTGGGGCCCAGAAGAGTAGAGAAGGAGTGGAGCAACCACCACACGTGCATTATGATCAGCTGCTCACGCTGATGTCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR-3UTR GCA 90 bp | GTGTGGCCTTCTTGGAGGACGTTGTGTCTCTGGGGGTGGGCTTTGAGGTTTCAGCAGTGTCACTCTTCTTaGTGCCTTTGGATCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: VWPSWRTLCLWGWALRFQQCHSS*CLWIQM Trigger: CATCTGGATCCAAAGGCAGCAAGAAGAGTGACACTG...CTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAAGAAGGCCACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR-3UTR GCA 90 bp | CGGGGACCTGGAAGAAATAGCCTGGACTCCATGAATCTGCTGCTTCCTGAGGAACTCCAGCACCATGACTaGCTTACATGTGCCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: RGPGRNSLDSMNLLLPEELQHHD*LTCALL Trigger: AAGCAAGGCACATGTAAGGCAGTCATGGTGCTGGAG...TTCCTCAGGAAGCAGCAGATTCATGGAGTCCAGGCTATTTCTTCCAGGTCCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGCCCAGTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTTTGTCAGAGTTGCCATaGTCATGGTGTCTCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: SRPSVTLLAAFGSRCEFSLSELP*SWCLFT Trigger: TGTGAAGAGACACCATGACCATGGCAACTCTGACAA...AGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACACTGGGCCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR-3UTR CCA 90 bp | TTAATACGGGGACCTGGAAGAAATAGCCTGGACTCCATGAATCTGCTGCTTCCTTTGTGTCTCTGGGGGTaGGCTTTGAGGTTTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: LIRGPGRNSLDSMNLLLPLCLWG*ALRFQI Trigger: AATCTGAAACCTCAAAGCCCACCCCCAGAGACACAA...AGGAAGCAGCAGATTCATGGAGTCCAGGCTATTTCTTCCAGGTCCCCGTATTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| 3UTR-3UTR TCA 90 bp | TTAACATTAGCCGGTGAGAGCTGGTCATGTCTCTGCCTACCCCCTCCTAACACGATCATGATAATGGACTaGATCTCTGAAACTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: LTLAGESWSCLCLPPPNTIMIMD*ISETVS Trigger: GCTTACAGTTTCAGAGATTCAGTCCATTATCATGAT...CGTGTTAGGAGGGGGTAGGCAGAGACATGACCAGCTCTCACCGGCTAATGTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR-3UTR CCA 90 bp | TTAATACGGGGACCTGGAAGAAATAGCCTGGACTCCATGAATCTGCTGCTTCCTTTGTCAGAGTTGCCATaGTCATGGTGTCTCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: LIRGPGRNSLDSMNLLLPLSELP*SWCLFT Trigger: TGTGAAGAGACACCATGACCATGGCAACTCTGACAA...AGGAAGCAGCAGATTCATGGAGTCCAGGCTATTTCTTCCAGGTCCCCGTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATTCATTTCTGGGCCTGTTCTGGTTTGAATAAAAAGGCATATAGGGAGTTGAGGACGTTGTGTCTCTaGGGGTGGGCTTTGAGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CIHFWACSGLNKKAYRELRTLCL*GWALRF Trigger: AAACCTCAAAGCCCACCCCCAGAGACACAACGTCCT...CAACTCCCTATATGCCTTTTTATTCAAACCAGAACAGGCCCAGAAATGAATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGCTACCTCTCATCATGATAATGGACTaGATCTCTGAAACTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: VSLFLLPLDPDVNSLLPLIMIMD*ISETVS Trigger: GCTTACAGTTTCAGAGATTCAGTCCATTATCATGAT...GAGAGGTAGCAGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR GCA 72 bp | TCTTCTGGGCCCCAGGATCCTCTGCCTAGGGAATGGTaGCATCCATGCTGGGTGCCATCCCACCTCAATGGT | + |
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Preference number: 3 (lower is better) Translates to: SSGPQDPLPREW*HPCWVPSHLNG Trigger: ACCATTGAGGTGGGATGGCACCCAGCATGGATGGCACCATTCCCTAGGCAGAGGATCCTGGGGCCCAGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR CCA 72 bp | GTGTGGCCTTCTTGGAGGACGTTGTGTCTCTGGGGGTaGGCTTTGAGGTTTCAGATTGCTCACAGCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VWPSWRTLCLWG*ALRFQIAHSRP Trigger: GGGCCTGCTGTGAGCAATCTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAAGAAGGCCACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR GCA 72 bp | GTTGTGTCTCTGGGGGTGGGCTTTGAGGTTTCAGATTaGTCACAGCAGGCCCAGTGTCACTCTTCTTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: VVSLGVGFEVSD*SQQAQCHSSCC Trigger: GCAGCAAGAAGAGTGACACTGGGCCTGCTGTGAGCAATCTGAAACCTCAAAGCCCACCCCCAGAGACACAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR CCA 72 bp | ATGGTGTCTCTTCACAGCAGTAGAACACCCAGCATCTaGGCCTACTCCCTTCCCTGTACCAATGGGCATGGT | + |
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Preference number: 3 (lower is better) Translates to: MVSLHSSRTPSI*AYSLPCTNGHG Trigger: ACCATGCCCATTGGTACAGGGAAGGGAGTAGGCCCAGATGCTGGGTGTTCTACTGCTGTGAAGAGACACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR-3UTR CAA 90 bp | GAATGGTGCCATCCATGCTGGGTGCCATCCCACCTCAATGGTACCAATATAACCCTCTGGGGGTGGGCTTaGAGGTTTCAGATTGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: EWCHPCWVPSHLNGTNITLWGWA*RFQIAH Trigger: GTGAGCAATCTGAAACCTCAAAGCCCACCCCCAGAG...GGTTATATTGGTACCATTGAGGTGGGATGGCACCCAGCATGGATGGCACCATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR-3UTR CAA 90 bp | CGGGGACCTGGAAGAAATAGCCTGGACTCCATGAATCTGCTGCTTCCTGAGGAATGCCTTACATGTGCCTaGCTTTCTACCATCATGATA | + |
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Preference number: 3 (lower is better) Translates to: RGPGRNSLDSMNLLLPEECLTCA*LSTIMI Trigger: TATCATGATGGTAGAAAGCAAGGCACATGTAAGGCA...TTCCTCAGGAAGCAGCAGATTCATGGAGTCCAGGCTATTTCTTCCAGGTCCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGTGACTATAGTGCAAGCAGAAGGAAGATATATCGAACTGGCTTCATGTTGCGGAGGTGTGGCCTTCTaGGAGGACGTTGTGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: VVTIVQAEGRYIELASCCGGVAF*EDVVSL Trigger: CAGAGACACAACGTCCTCCAAGAAGGCCACACCTCC...GCAACATGAAGCCAGTTCGATATATCTTCCTTCTGCTTGCACTATAGTCACTAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR TCA 72 bp | ATAGTCCATAATGGCAGGGAAGTCAAGACATCAGCGTaGGCAGCTGATCATAATGCACGTGTGGTGGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: IVHNGREVKTSA*AADHNARVVVA Trigger: AGCAACCACCACACGTGCATTATGATCAGCTGCTCACGCTGATGTCTTGACTTCCCTGCCATTATGGACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCCCAGTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGTGCCTTACATGTGCCTaGCTTTCTACCATCATGATA | + |
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Preference number: 3 (lower is better) Translates to: AGPVSLFLLPLDPDVNSLCLTCA*LSTIMI Trigger: TATCATGATGGTAGAAAGCAAGGCACATGTAAGGCA...CAGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACACTGGGCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATTCATTTCTGGGCCTGTTCTGGTTTGAATAAAAAGGCATATAGGGAGTTGGGAGGTGTGGCCTTCTaGGAGGACGTTGTGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: CIHFWACSGLNKKAYRELGGVAF*EDVVSL Trigger: CAGAGACACAACGTCCTCCAAGAAGGCCACACCTCC...CAACTCCCTATATGCCTTTTTATTCAAACCAGAACAGGCCCAGAAATGAATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| 3UTR TCA 72 bp | TCCAGATGTGAATTCTCTGCTACCTCTCCAGCACCATaGCTGCCTTACATGTGCCTTGCTTTCTACCATCAT | + |
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Preference number: 3 (lower is better) Translates to: SRCEFSATSPAP*LPYMCLAFYHH Trigger: ATGATGGTAGAAAGCAAGGCACATGTAAGGCAGTCATGGTGCTGGAGAGGTAGCAGAGAATTCACATCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR TCA 72 bp | AGCTGGTCATGTCTCTGCCTACCCCCTCCTAACACGTaGCAGATAAGAGAATTAATGCAGACTGTAGTGACT | + |
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Preference number: 3 (lower is better) Translates to: SWSCLCLPPPNT*QIRELMQTVVT Trigger: AGTCACTACAGTCTGCATTAATTCTCTTATCTGTCACGTGTTAGGAGGGGGTAGGCAGAGACATGACCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR-3UTR CAA 90 bp | GTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGCTACCTCTCCAATTGAACGTCTTTCTTaGTCAGAGTTGCCATGGTCA | + |
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Preference number: 3 (lower is better) Translates to: VTLLAAFGSRCEFSATSPIERLS*SELPWS Trigger: TGACCATGGCAACTCTGACAAAGAAAGACGTTCAAT...TGGAGAGGTAGCAGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGCTACCTCTCATTGAACGTCTTTCTTaGTCAGAGTTGCCATGGTCA | + |
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Preference number: 3 (lower is better) Translates to: VSLFLLPLDPDVNSLLPLIERLS*SELPWS Trigger: TGACCATGGCAACTCTGACAAAGAAAGACGTTCAAT...GAGAGGTAGCAGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR-3UTR CAA 90 bp | GACTCCATGAATCTGCTGCTTCCTGAGGAAAGAGCTCAAGTTCAAATCCTCTGCTGCCTTACATGTGCCTaGCTTTCTACCATCATGATA | + |
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Preference number: 3 (lower is better) Translates to: DSMNLLLPEERAQVQILCCLTCA*LSTIMI Trigger: TATCATGATGGTAGAAAGCAAGGCACATGTAAGGCA...GCAGAGGATTTGAACTTGAGCTCTTTCCTCAGGAAGCAGCAGATTCATGGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| 3UTR GCA 72 bp | GATGTGAATTCTCTGCTACCTCTCCAGCACCATGACTaGCTTACATGTGCCTTGCTTTCTACCATCATGATA | + |
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Preference number: 3 (lower is better) Translates to: DVNSLLPLQHHD*LTCALLSTIMI Trigger: TATCATGATGGTAGAAAGCAAGGCACATGTAAGGCAGTCATGGTGCTGGAGAGGTAGCAGAGAATTCACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR CCA 72 bp | ATTGAACGTCTTTCTTTGTCAGAGTTGCCATGGTCATaGTGTCTCTTCACAGCAGTAGAACACCCAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: IERLSLSELPWS*CLFTAVEHPAS Trigger: AGATGCTGGGTGTTCTACTGCTGTGAAGAGACACCATGACCATGGCAACTCTGACAAAGAAAGACGTTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR GCA 72 bp | CTGCTTCCTGAGGAAAGAGCTCAAGTTCAAATCCTCTaGTATAATGCATTCATTTCTGGGCCTGTTCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: LLPEERAQVQIL*YNAFISGPVLV Trigger: AACCAGAACAGGCCCAGAAATGAATGCATTATAGCAGAGGATTTGAACTTGAGCTCTTTCCTCAGGAAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| 3UTR CCA 72 bp | AAGCTAATTGAACGTCTTTCTTTGTCAGAGTTGCCATaGTCATGGTGTCTCTTCACAGCAGTAGAACACCCA | + |
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Preference number: 3 (lower is better) Translates to: KLIERLSLSELP*SWCLFTAVEHP Trigger: TGGGTGTTCTACTGCTGTGAAGAGACACCATGACCATGGCAACTCTGACAAAGAAAGACGTTCAATTAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| CDS-3UTR TCA 90 bp | CCCCAGGATCCTCTGCCTAGGGAATGGTGCCATCCATGCTGGGTGCCATCCCACCTTTTCTGTGGGTCCTaGGGCAGGAGCCGTGGGATA | + |
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Preference number: 4 (lower is better) Translates to: PQDPLPREWCHPCWVPSHLFCGS*GRSRGI Trigger: TATCCCACGGCTCCTGCCTCAGGACCCACAGAAAAG...GTGGGATGGCACCCAGCATGGATGGCACCATTCCCTAGGCAGAGGATCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| CDS-3UTR TCA 90 bp | GTGTGGCCTTCTTGGAGGACGTTGTGTCTCTGGGGGTGGGCTTTGAGGTTTCAGGGCTGTCGACGGGGGTaGGACACTTGGAAAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: VWPSWRTLCLWGWALRFQGCRRG*DTWKTS Trigger: AGAGGTTTTCCAAGTGTCTCACCCCCGTCGACAGCC...CTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAAGAAGGCCACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| CDS-3UTR TCA 90 bp | GTGTGGCCTTCTTGGAGGACGTTGTGTCTCTGGGGGTGGGCTTTGAGGTTTCAGAGGACAGACAGGTTCTaGAGGGGCTGGATGCCACTA | + |
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Preference number: 4 (lower is better) Translates to: VWPSWRTLCLWGWALRFQRTDRF*RGWMPL Trigger: TAGTGGCATCCAGCCCCTTCAGAACCTGTCTGTCCT...CTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAAGAAGGCCACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| 3UTR CAA 72 bp | CAGCGTGAGCAGCTGATCATAATGCACGTGTGGTGGTaGCTCCACTCCTTCTCTACTCTTCTGGGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QREQLIIMHVWW*LHSFSTLLGPR Trigger: CCTGGGGCCCAGAAGAGTAGAGAAGGAGTGGAGCAACCACCACACGTGCATTATGATCAGCTGCTCACGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| CDS-3UTR TCA 90 bp | GTGTGGCCTTCTTGGAGGACGTTGTGTCTCTGGGGGTGGGCTTTGAGGTTTCAGCTTCCAGGTACTCCATaGTGGCCAGTGACTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: VWPSWRTLCLWGWALRFQLPGTP*WPVTGQ Trigger: TTGTCCAGTCACTGGCCATCATGGAGTACCTGGAAG...CTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAAGAAGGCCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| CDS-3UTR CCA 90 bp | GGGAAGTCAAGACATCAGCGTGAGCAGCTGATCATAATGCACGTGTGGTGGTTGGATGGCTCTTTTCTGTaGGTCCTGAGGCAGGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: GKSRHQREQLIIMHVWWLDGSFL*VLRQEP Trigger: CGGCTCCTGCCTCAGGACCCACAGAAAAGAGCCATC...CAACCACCACACGTGCATTATGATCAGCTGCTCACGCTGATGTCTTGACTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| CDS-3UTR TCA 90 bp | AGCAGGCCCAGTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGGCTGTCGACGGGGGTaGGACACTTGGAAAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: SRPSVTLLAAFGSRCEFSGCRRG*DTWKTS Trigger: AGAGGTTTTCCAAGTGTCTCACCCCCGTCGACAGCC...AGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACACTGGGCCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| CDS-3UTR GCA 90 bp | CGGGGACCTGGAAGAAATAGCCTGGACTCCATGAATCTGCTGCTTCCTGAGGAATTCCCTGCTGTGCTCTaGAGAATCTTCTCCAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: RGPGRNSLDSMNLLLPEEFPAVL*RIFSRA Trigger: CGCTCTGGAGAAGATTCTGCAGAGCACAGCAGGGAA...TTCCTCAGGAAGCAGCAGATTCATGGAGTCCAGGCTATTTCTTCCAGGTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| CDS-3UTR TCA 90 bp | GTGTGGCCTTCTTGGAGGACGTTGTGTCTCTGGGGGTGGGCTTTGAGGTTTCAGGTGACTGGACAATGGTaGTTCCATCAATTTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VWPSWRTLCLWGWALRFQVTGQW*FHQFSA Trigger: CGCTGAAAATTGATGGAATCACCATTGTCCAGTCAC...CTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAAGAAGGCCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGACATCAGCGTGAGCAGCTGATCATAATGCACGTGTGGTGGTTGCTCCACCTCCATGATGGCCAGTaGCTGGACAATGGTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRHQREQLIIMHVWWLLHLHDGQ*LDNGDS Trigger: GGAATCACCATTGTCCAGTCACTGGCCATCATGGAG...GTGGAGCAACCACCACACGTGCATTATGATCAGCTGCTCACGCTGATGTCTTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
||
| CDS-3UTR TCA 90 bp | GAATGGTGCCATCCATGCTGGGTGCCATCCCACCTCAATGGTACCAATATAACCCTTCCAGGTACTCCATaGTGGCCAGTGACTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: EWCHPCWVPSHLNGTNITLPGTP*WPVTGQ Trigger: TTGTCCAGTCACTGGCCATCATGGAGTACCTGGAAG...GGTTATATTGGTACCATTGAGGTGGGATGGCACCCAGCATGGATGGCACCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCCCAGTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTAGGACAGACAGGTTCTaGAGGGGCTGGATGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SRPSVTLLAAFGSRCEFSRTDRF*RGWMPL Trigger: TAGTGGCATCCAGCCCCTTCAGAACCTGTCTGTCCT...AGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACACTGGGCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCCAGTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGACCTTTTGGGCCCATTaGATCTGGTTCTCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPVSLFLLPLDPDVNSLTFWAH*IWFSCP Trigger: GGGACAGGAGAACCAGATGCAATGGGCCCAAAAGGT...CAGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACACTGGGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGCCTTCTTGGAGGACGTTGTGTCTCTGGGGGTGGGCTTTGAGGTTTCAGTCAGCATTTGCCACTTaGGGTACTAAGCACACATCA | + |
|
Preference number: 4 (lower is better) Translates to: VWPSWRTLCLWGWALRFQSAFAT*GTKHTS Trigger: TGATGTGTGCTTAGTACCCCAAGTGGCAAATGCTGA...CTGAAACCTCAAAGCCCACCCCCAGAGACACAACGTCCTCCAAGAAGGCCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCCCAGTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTCTTCCAGGTACTCCATaGTGGCCAGTGACTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SRPSVTLLAAFGSRCEFSLPGTP*WPVTGQ Trigger: TTGTCCAGTCACTGGCCATCATGGAGTACCTGGAAG...AGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACACTGGGCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR TCA 90 bp | CGTCTTTCTTTGTCAGAGTTGCCATGGTCATGGTGTCTCTTCACAGCAGTAGAACTTTTCTGTGGGTCCTaGGGCAGGAGCCGTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLSELPWSWCLFTAVELFCGS*GRSRGI Trigger: TATCCCACGGCTCCTGCCTCAGGACCCACAGAAAAG...TTCTACTGCTGTGAAGAGACACCATGACCATGGCAACTCTGACAAAGAAAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR TCA 90 bp | TCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGCTACCTCTCCAGAGGACAGACAGGTTCTaGAGGGGCTGGATGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SLFLLPLDPDVNSLLPLQRTDRF*RGWMPL Trigger: TAGTGGCATCCAGCCCCTTCAGAACCTGTCTGTCCT...CTGGAGAGGTAGCAGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR GCA 90 bp | GAATGGTGCCATCCATGCTGGGTGCCATCCCACCTCAATGGTACCAATATAACCTCCTCAGTGAACTGTTaGCCGCCATCCTTTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EWCHPCWVPSHLNGTNITSSVNC*PPSFMR Trigger: CCTCATAAAGGATGGCGGGCAACAGTTCACTGAGGA...GGTTATATTGGTACCATTGAGGTGGGATGGCACCCAGCATGGATGGCACCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
||
| CDS-3UTR GCA 90 bp | GATGTGAATTCTCTGCTACCTCTCCAGCACCATGACTGCCTTACATGTGCCTTGACCTTTTGGGCCCATTaGATCTGGTTCTCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DVNSLLPLQHHDCLTCALTFWAH*IWFSCP Trigger: GGGACAGGAGAACCAGATGCAATGGGCCCAAAAGGT...CAAGGCACATGTAAGGCAGTCATGGTGCTGGAGAGGTAGCAGAGAATTCACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR TCA 90 bp | GTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGCTACCTCTCCACTCCATGATGGCCAGTaGCTGGACAATGGTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTLLAAFGSRCEFSATSPLHDGQ*LDNGDS Trigger: GGAATCACCATTGTCCAGTCACTGGCCATCATGGAG...TGGAGAGGTAGCAGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTCTTTGTCAGAGTTGCCATGGTCATGGTGTCTCTTCACAGCAGTAGAACACTTTTCTGTGGGTCCTaGGGCAGGAGCCGTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SFFVRVAMVMVSLHSSRTLFCGS*GRSRGI Trigger: TATCCCACGGCTCCTGCCTCAGGACCCACAGAAAAG...TGTTCTACTGCTGTGAAGAGACACCATGACCATGGCAACTCTGACAAAGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR GCA 90 bp | GACTCCATGAATCTGCTGCTTCCTGAGGAAAGAGCTCAAGTTCAAATCCTCTGCACCTTTTGGGCCCATTaGATCTGGTTCTCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSMNLLLPEERAQVQILCTFWAH*IWFSCP Trigger: GGGACAGGAGAACCAGATGCAATGGGCCCAAAAGGT...GCAGAGGATTTGAACTTGAGCTCTTTCCTCAGGAAGCAGCAGATTCATGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTTCACAGCAGTAGAACACCCAGCATCTGGGCCTACTCCCTTCCCTGTATCAGCATTTGCCACTTaGGGTACTAAGCACACATCA | + |
|
Preference number: 4 (lower is better) Translates to: CLFTAVEHPASGPTPFPVSAFAT*GTKHTS Trigger: TGATGTGTGCTTAGTACCCCAAGTGGCAAATGCTGA...TACAGGGAAGGGAGTAGGCCCAGATGCTGGGTGTTCTACTGCTGTGAAGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATATAGGGAGTTGCACTAATAGGAGGTGTGGCCTTCTTGGAGGACGTTGTCTGGCACTTGCTTCATaGGGTTCAGGGTCTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: RHIGSCTNRRCGLLGGRCLALAS*GSGSEI Trigger: AATTTCAGACCCTGAACCCCATGAAGCAAGTGCCAG...ACAACGTCCTCCAAGAAGGCCACACCTCCTATTAGTGCAACTCCCTATATGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
||
| CDS-3UTR CCA 90 bp | TCAAGACATCAGCGTGAGCAGCTGATCATAATGCACGTGTGGTGGTTGCTCCACATGATGGCCAGTGACTaGACAATGGTGATTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SRHQREQLIIMHVWWLLHMMASD*TMVIPS Trigger: TGATGGAATCACCATTGTCCAGTCACTGGCCATCAT...GTGGAGCAACCACCACACGTGCATTATGATCAGCTGCTCACGCTGATGTCTTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGCCCAGTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGATGATGGCCAGTGACTaGACAATGGTGATTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AGPVSLFLLPLDPDVNSLMMASD*TMVIPS Trigger: TGATGGAATCACCATTGTCCAGTCACTGGCCATCAT...CAGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACACTGGGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR TCA 90 bp | GATGTGAATTCTCTGCTACCTCTCCAGCACCATGACTGCCTTACATGTGCCTTGGTGACTGGACAATGGTaGTTCCATCAATTTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DVNSLLPLQHHDCLTCALVTGQW*FHQFSA Trigger: CGCTGAAAATTGATGGAATCACCATTGTCCAGTCAC...CAAGGCACATGTAAGGCAGTCATGGTGCTGGAGAGGTAGCAGAGAATTCACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR TCA 90 bp | TGCATTCATTTCTGGGCCTGTTCTGGTTTGAATAAAAAGGCATATAGGGAGTTGGGCTGTCGACGGGGGTaGGACACTTGGAAAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CIHFWACSGLNKKAYRELGCRRG*DTWKTS Trigger: AGAGGTTTTCCAAGTGTCTCACCCCCGTCGACAGCC...CAACTCCCTATATGCCTTTTTATTCAAACCAGAACAGGCCCAGAAATGAATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTTTCTTTGTCAGAGTTGCCATGGTCATGGTGTCTCTTCACAGCAGTAGAATCAGCATTTGCCACTTaGGGTACTAAGCACACATCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLSELPWSWCLFTAVESAFAT*GTKHTS Trigger: TGATGTGTGCTTAGTACCCCAAGTGGCAAATGCTGA...TTCTACTGCTGTGAAGAGACACCATGACCATGGCAACTCTGACAAAGAAAGACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| CDS-3UTR TCA 90 bp | CGTCTTTCTTTGTCAGAGTTGCCATGGTCATGGTGTCTCTTCACAGCAGTAGAAAATTCGAACTCTCCATaGACAGGAGCTTCGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLSELPWSWCLFTAVENSNSP*TGASEI Trigger: TATTTCCGAAGCTCCTGTTCATGGAGAGTTCGAATT...TTCTACTGCTGTGAAGAGACACCATGACCATGGCAACTCTGACAAAGAAAGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
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| 3UTR CAA 72 bp | GCAAGCAGAAGGAAGATATATCGAACTGGCTTCATGTaGCTAGAGAAAACTTTAATACGGGGACCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASRRKIYRTGFM*LEKTLIRGPGR Trigger: TCTTCCAGGTCCCCGTATTAAAGTTTTCTCTAGCAACATGAAGCCAGTTCGATATATCTTCCTTCTGCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
||
| CDS-3UTR CCA 90 bp | TGCATTCATTTCTGGGCCTGTTCTGGTTTGAATAAAAAGGCATATAGGGAGTTGATGATGGCCAGTGACTaGACAATGGTGATTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CIHFWACSGLNKKAYRELMMASD*TMVIPS Trigger: TGATGGAATCACCATTGTCCAGTCACTGGCCATCAT...CAACTCCCTATATGCCTTTTTATTCAAACCAGAACAGGCCCAGAAATGAATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222885.2 |
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| CDS TCA 90 bp | ATGAGGTCAGAAATCATGCGCACGATGGCTCTTTTCTGTGGGTCCTaGGGCAGGAGCCGTGGGATAGGCCGAGTCTCTTCCAGGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: MRSEIMRTMALFCGS*GRSRGIGRVSSRYS Trigger: GGAGTACCTGGAAGAGACTCGGCCTATCCCACGGCTCCTGCCTCAGGACCCACAGAAAAGAGCCATCGTGCGCATGATTTCTGACCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
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| CDS CCA 90 bp | ACTAGCGATGAGGTCAGAAATCATGCGCACGATGGCTCTTTTCTGTaGGTCCTGAGGCAGGAGCCGTGGGATAGGCCGAGTCTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSDEVRNHAHDGSFL*VLRQEPWDRPSLFQ Trigger: CTGGAAGAGACTCGGCCTATCCCACGGCTCCTGCCTCAGGACCCACAGAAAAGAGCCATCGTGCGCATGATTTCTGACCTCATCGCTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
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| CDS TCA 90 bp | CCGTGGGATAGGCCGAGTCTCTTCCAGGTACTCCATGATGGCCAGTaGCTGGACAATGGTGATTCCATCAATTTTCAGCGCTGGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PWDRPSLFQVLHDGQ*LDNGDSINFQRWHL Trigger: CAAGTGCCAGCGCTGAAAATTGATGGAATCACCATTGTCCAGTCACTGGCCATCATGGAGTACCTGGAAGAGACTCGGCCTATCCCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
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| CDS GCA 90 bp | GCACACATCAGCCATGGATACCTCATCTCCTACGCAGTACTTCCCTaGTGTGCTCTGCAGAATCTTCTCCAGAGCGTTAAAGCCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AHISHGYLISYAVLP*CALQNLLQSVKAGS Trigger: ACTTCCGGCTTTAACGCTCTGGAGAAGATTCTGCAGAGCACAGCAGGGAAGTACTGCGTAGGAGATGAGGTATCCATGGCTGATGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
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| CDS CCA 90 bp | GGGATAGGCCGAGTCTCTTCCAGGTACTCCATGATGGCCAGTGACTaGACAATGGTGATTCCATCAATTTTCAGCGCTGGCACTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GIGRVSSRYSMMASD*TMVIPSIFSAGTCF Trigger: GAAGCAAGTGCCAGCGCTGAAAATTGATGGAATCACCATTGTCCAGTCACTGGCCATCATGGAGTACCTGGAAGAGACTCGGCCTATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
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| CDS-3UTR CAA 90 bp | TGTCTCTTCACAGCAGTAGAACACCCAGCATCTGGGCCTACTCCCTTCCCTGTAGGGCTTAGATCCACCTaGAACCTTTCAGCATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CLFTAVEHPASGPTPFPVGLRST*NLSAFA Trigger: GGCAAATGCTGAAAGGTTCAAGGTGGATCTAAGCCC...TACAGGGAAGGGAGTAGGCCCAGATGCTGGGTGTTCTACTGCTGTGAAGAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
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| CDS TCA 90 bp | CCATCAATTTTCAGCGCTGGCACTTGCTTCATGGGGTTCAGGGTCTaGAATTCCTCAGTGAACTGTTGCCCGCCATCCTTTATGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSIFSAGTCFMGFRV*NSSVNCCPPSFMRL Trigger: CAACCTCATAAAGGATGGCGGGCAACAGTTCACTGAGGAATTTCAGACCCTGAACCCCATGAAGCAAGTGCCAGCGCTGAAAATTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222222.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCCCAGTGTCACTCTTCTTGCTGCCTTTGGATCCAGATGTGAATTCTCTGGGCTTAGATCCACCTaGAACCTTTCAGCATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRPSVTLLAAFGSRCEFSGLRST*NLSAFA Trigger: GGCAAATGCTGAAAGGTTCAAGGTGGATCTAAGCCC...AGAGAATTCACATCTGGATCCAAAGGCAGCAAGAAGAGTGACACTGGGCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222885.2 |
||
| CDS-3UTR CAA 90 bp | TGCATTCATTTCTGGGCCTGTTCTGGTTTGAATAAAAAGGCATATAGGGAGTTGTTTCAGCGCTGGCACTaGCTTCATGGGGTTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CIHFWACSGLNKKAYRELFQRWH*LHGVQG Trigger: ACCCTGAACCCCATGAAGCAAGTGCCAGCGCTGAAA...CAACTCCCTATATGCCTTTTTATTCAAACCAGAACAGGCCCAGAAATGAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
||
| CDS-3UTR CAA 90 bp | GTAGTGACTATAGTGCAAGCAGAAGGAAGATATATCGAACTGGCTTCATGTTGCGGGCTTAGATCCACCTaGAACCTTTCAGCATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VVTIVQAEGRYIELASCCGLRST*NLSAFA Trigger: GGCAAATGCTGAAAGGTTCAAGGTGGATCTAAGCCC...GCAACATGAAGCCAGTTCGATATATCTTCCTTCTGCTTGCACTATAGTCACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063117.10 |
||
| CDS TCA 72 bp | GAAATCATGCGCACGATGGCTCTTTTCTGTGGGTCCTaGGGCAGGAGCCGTGGGATAGGCCGAGTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EIMRTMALFCGS*GRSRGIGRVSS Trigger: GGAAGAGACTCGGCCTATCCCACGGCTCCTGCCTCAGGACCCACAGAAAAGAGCCATCGTGCGCATGATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
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| CDS CCA 72 bp | GAGGTCAGAAATCATGCGCACGATGGCTCTTTTCTGTaGGTCCTGAGGCAGGAGCCGTGGGATAGGCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: EVRNHAHDGSFL*VLRQEPWDRPS Trigger: ACTCGGCCTATCCCACGGCTCCTGCCTCAGGACCCACAGAAAAGAGCCATCGTGCGCATGATTTCTGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
||
| CDS TCA 72 bp | TTCAGCGCTGGCACTTGCTTCATGGGGTTCAGGGTCTaGAATTCCTCAGTGAACTGTTGCCCGCCATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FSAGTCFMGFRV*NSSVNCCPPSF Trigger: AAAGGATGGCGGGCAACAGTTCACTGAGGAATTTCAGACCCTGAACCCCATGAAGCAAGTGCCAGCGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222222.2 |
||
| CDS CCA 72 bp | CATTTGCCACTTGGGGTACTAAGCACACATCAGCCATaGATACCTCATCTCCTACGCAGTACTTCCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLPLGVLSTHQP*IPHLLRSTSLL Trigger: CAGCAGGGAAGTACTGCGTAGGAGATGAGGTATCCATGGCTGATGTGTGCTTAGTACCCCAAGTGGCAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
||
| CDS CAA 90 bp | CTGCAGAATCTTCTCCAGAGCGTTAAAGCCGGAAGTAATAACCTTTaGGGCCCATTGCATCTGGTTCTCCTGTCCCACTTGCTTCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LQNLLQSVKAGSNNL*GPLHLVLLSHLLQD Trigger: GTCCTGAAGCAAGTGGGACAGGAGAACCAGATGCAATGGGCCCAAAAGGTTATTACTTCCGGCTTTAACGCTCTGGAGAAGATTCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
||
| CDS GCA 72 bp | GCGTTAAAGCCGGAAGTAATAACCTTTTGGGCCCATTaGATCTGGTTCTCCTGTCCCACTTGCTTCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ALKPEVITFWAH*IWFSCPTCFRT Trigger: TGTCCTGAAGCAAGTGGGACAGGAGAACCAGATGCAATGGGCCCAAAAGGTTATTACTTCCGGCTTTAACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
||
| CDS GCA 72 bp | AGCCATGGATACCTCATCTCCTACGCAGTACTTCCCTaGTGTGCTCTGCAGAATCTTCTCCAGAGCGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SHGYLISYAVLP*CALQNLLQSVK Trigger: TTTAACGCTCTGGAGAAGATTCTGCAGAGCACAGCAGGGAAGTACTGCGTAGGAGATGAGGTATCCATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
||
| CDS CAA 72 bp | CATGGGGTTCAGGGTCTGAAATTCCTCAGTGAACTGTaGCCCGCCATCCTTTATGAGGTTGATGGGCACTAT | + |
|
Preference number: 6 (lower is better) Translates to: HGVQGLKFLSEL*PAILYEVDGHY Trigger: ATAGTGCCCATCAACCTCATAAAGGATGGCGGGCAACAGTTCACTGAGGAATTTCAGACCCTGAACCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222222.2 |
||
| CDS CAA 72 bp | AGCGTTAAAGCCGGAAGTAATAACCTTTTGGGCCCATaGCATCTGGTTCTCCTGTCCCACTTGCTTCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVKAGSNNLLGP*HLVLLSHLLQD Trigger: GTCCTGAAGCAAGTGGGACAGGAGAACCAGATGCAATGGGCCCAAAAGGTTATTACTTCCGGCTTTAACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
||
| CDS CAA 72 bp | CTTCTCCAGAGCGTTAAAGCCGGAAGTAATAACCTTTaGGGCCCATTGCATCTGGTTCTCCTGTCCCACTTG | + |
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Preference number: 6 (lower is better) Translates to: LLQSVKAGSNNL*GPLHLVLLSHL Trigger: CAAGTGGGACAGGAGAACCAGATGCAATGGGCCCAAAAGGTTATTACTTCCGGCTTTAACGCTCTGGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
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| CDS CAA 90 bp | CACTTGCTTCATGGGGTTCAGGGTCTGAAATTCCTCAGTGAACTGTaGCCCGCCATCCTTTATGAGGTTGATGGGCACTATCTCATAGTC | + |
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Preference number: 6 (lower is better) Translates to: HLLHGVQGLKFLSEL*PAILYEVDGHYLIV Trigger: GACTATGAGATAGTGCCCATCAACCTCATAAAGGATGGCGGGCAACAGTTCACTGAGGAATTTCAGACCCTGAACCCCATGAAGCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222222.2 |
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| CDS CCA 72 bp | CTTAGATCCACCTTGAACCTTTCAGCATTTGCCACTTaGGGTACTAAGCACACATCAGCCATGGATACCTCA | + |
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Preference number: 6 (lower is better) Translates to: LRSTLNLSAFAT*GTKHTSAMDTS Trigger: TGAGGTATCCATGGCTGATGTGTGCTTAGTACCCCAAGTGGCAAATGCTGAAAGGTTCAAGGTGGATCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063117.10 ENSMUST00000220574.2 ENSMUST00000222222.2 ENSMUST00000222885.2 |
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| CDS CAA 72 bp | GACAATGGTGATTCCATCAATTTTCAGCGCTGGCACTaGCTTCATGGGGTTCAGGGTCTGAAATTCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: DNGDSINFQRWH*LHGVQGLKFLS Trigger: ACTGAGGAATTTCAGACCCTGAACCCCATGAAGCAAGTGCCAGCGCTGAAAATTGATGGAATCACCATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063117.10 ENSMUST00000222222.2 |
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