RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSTT3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000001665

Ensembl transcript IDs: ENSMUST00000001715.10, ENSMUST00000133869.2, ENSMUST00000173537.2, ENSMUST00000174187.2

Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGGACATACCAAGCAACTTCCACTCCCACAAAGGAACCAGCCCTaGACCCCACCTATGGCAGGAAGCAAAGACGCAGAGGACAAAGGT +
Preference number: 1 (lower is better)
Translates to: SGHTKQLPLPQRNQP*TPPMAGSKDAEDKG
Trigger: ACCTTTGTCCTCTGCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTTGTGGGAGTGGAAGTTGCTTGGTATGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR GCA 90 bp CAATCCCCGTCTCTTGCATGTATTCAACTGAGAGATCATAGATCCTaGATGCCAAAACTGAGGAAGGGAGGCACCAGGGTTGAGGAGCAC +
Preference number: 1 (lower is better)
Translates to: QSPSLACIQLRDHRS*MPKLRKGGTRVEEH
Trigger: GTGCTCCTCAACCCTGGTGCCTCCCTTCCTCAGTTTTGGCATGCAGGATCTATGATCTCTCAGTTGAATACATGCAAGAGACGGGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR CCA 90 bp CTCTCCAGAAGTCAGATAAGAACTGATGTTACAGCACAAGCCAGGTaGGGACACAGAGGGAACACAGGTGATGCAGAGAGGAAATTGCGG +
Preference number: 1 (lower is better)
Translates to: LSRSQIRTDVTAQAR*GHRGNTGDAERKLR
Trigger: CCGCAATTTCCTCTCTGCATCACCTGTGTTCCCTCTGTGTCCCCACCTGGCTTGTGCTGTAACATCAGTTCTTATCTGACTTCTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR TCA 90 bp TCCCAAGTATTTTCCTGGAGCTCTCTCCAGAAGTCAGATAAGAACTaGTGTTACAGCACAAGCCAGGTGGGGACACAGAGGGAACACAGG +
Preference number: 1 (lower is better)
Translates to: SQVFSWSSLQKSDKN*CYSTSQVGTQREHR
Trigger: CCTGTGTTCCCTCTGTGTCCCCACCTGGCTTGTGCTGTAACATCAGTTCTTATCTGACTTCTGGAGAGAGCTCCAGGAAAATACTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR CCA 90 bp CCCTCTCTGAGGATGATGGTTAGGAGGAAGGGACGATTTCTTCAATaGCCACTTGGTAAGGTGTCCATGCTCCTGAAAACAAATCCTCAC +
Preference number: 1 (lower is better)
Translates to: PSLRMMVRRKGRFLQ*PLGKVSMLLKTNPH
Trigger: GTGAGGATTTGTTTTCAGGAGCATGGACACCTTACCAAGTGGCCATTGAAGAAATCGTCCCTTCCTCCTAACCATCATCCTCAGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
3UTR CCA 90 bp TACATGTATATACAAATATGGCTTGGAGGATGGGGGAAGGTTCAATaGTTTGTAAAGTTTCAAAGAAAAGGAATATGGCCAGATACGTTT +
Preference number: 1 (lower is better)
Translates to: YMYIQIWLGGWGKVQ*FVKFQRKGIWPDTF
Trigger: AAACGTATCTGGCCATATTCCTTTTCTTTGAAACTTTACAAACCATTGAACCTTCCCCCATCCTCCAAGCCATATTTGTATATACATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR-3UTR TCA 90 bp AACCAGCCCTGCACCCCACCTATGGCAGGAAGCAAAGACGCAGAGGACAAAGGTCCTGCATGCCAAAACTaGGGAAGGGAGGCACCAGGG +
Preference number: 2 (lower is better)
Translates to: NQPCTPPMAGSKDAEDKGPACQN*GREAPG
Trigger: CCCTGGTGCCTCCCTTCCTCAGTTTTGGCATGCAGG...ACCTTTGTCCTCTGCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR-3UTR TCA 90 bp ACATACCAAGCAACTTCCACTCCCACAAAGGAACCAGCCCTGCACCCCACCTATCAGAGGGAACACAGGTaGTGCAGAGAGGAAATTGCG +
Preference number: 2 (lower is better)
Translates to: TYQATSTPTKEPALHPTYQREHR*CREEIA
Trigger: CGCAATTTCCTCTCTGCATCACCTGTGTTCCCTCTG...ATAGGTGGGGTGCAGGGCTGGTTCCTTTGTGGGAGTGGAAGTTGCTTGGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR-3UTR CCA 90 bp CACTCCCACAAAGGAACCAGCCCTGCACCCCACCTATGGCAGGAAGCAAAGACGTATACAAATATGGCTTaGAGGATGGGGGAAGGTTCA +
Preference number: 2 (lower is better)
Translates to: HSHKGTSPAPHLWQEAKTYTNMA*RMGEGS
Trigger: TGAACCTTCCCCCATCCTCCAAGCCATATTTGTATA...CGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTTGTGGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR-3UTR CCA 90 bp CCTGCACCCCACCTATGGCAGGAAGCAAAGACGCAGAGGACAAAGGTCTTTCACATGTATATACAAATATaGCTTGGAGGATGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: PAPHLWQEAKTQRTKVFHMYIQI*LGGWGK
Trigger: CTTCCCCCATCCTCCAAGCCATATTTGTATATACAT...GTGAAAGACCTTTGTCCTCTGCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR GCA 72 bp ACCAAGCAACTTCCACTCCCACAAAGGAACCAGCCCTaGACCCCACCTATGGCAGGAAGCAAAGACGCAGAG +
Preference number: 3 (lower is better)
Translates to: TKQLPLPQRNQP*TPPMAGSKDAE
Trigger: CTCTGCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTTGTGGGAGTGGAAGTTGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR TCA 72 bp CTGCATGCCAAAACTGAGGAAGGGAGGCACCAGGGTTaGGGAGCACAGAGGGTCACGTGGTACCAGATATCA +
Preference number: 3 (lower is better)
Translates to: LHAKTEEGRHQG*GAQRVTWYQIS
Trigger: TGATATCTGGTACCACGTGACCCTCTGTGCTCCTCAACCCTGGTGCCTCCCTTCCTCAGTTTTGGCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR CCA 72 bp CACTCCCACAAAGGAACCAGCCCTGCACCCCACCTATaGCAGGAAGCAAAGACGCAGAGGACAAAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: HSHKGTSPAPHL*QEAKTQRTKVF
Trigger: AAAGACCTTTGTCCTCTGCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTTGTGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR-3UTR CAA 90 bp CCAAAACTGAGGAAGGGAGGCACCAGGGTTGAGGAGCACAGAGGGTCACGTGGTATATACAAATATGGCTaGGAGGATGGGGGAAGGTTC +
Preference number: 3 (lower is better)
Translates to: PKLRKGGTRVEEHRGSRGIYKYG*EDGGRF
Trigger: GAACCTTCCCCCATCCTCCAAGCCATATTTGTATAT...ACCACGTGACCCTCTGTGCTCCTCAACCCTGGTGCCTCCCTTCCTCAGTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR GCA 72 bp GACACAGAGGGAACACAGGTGATGCAGAGAGGAAATTaGGGACCAGAGACCCTATGTCCTAGTGACAGCCAA +
Preference number: 3 (lower is better)
Translates to: DTEGTQVMQRGN*GPETLCPSDSQ
Trigger: TTGGCTGTCACTAGGACATAGGGTCTCTGGTCCGCAATTTCCTCTCTGCATCACCTGTGTTCCCTCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR TCA 72 bp TTTTCCTGGAGCTCTCTCCAGAAGTCAGATAAGAACTaGTGTTACAGCACAAGCCAGGTGGGGACACAGAGG +
Preference number: 3 (lower is better)
Translates to: FSWSSLQKSDKN*CYSTSQVGTQR
Trigger: CCTCTGTGTCCCCACCTGGCTTGTGCTGTAACATCAGTTCTTATCTGACTTCTGGAGAGAGCTCCAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR GCA 72 bp CCGGAGACAGGTAGAAGGCAGCAGTCAGGGTTAGAATaGTTGGGACAAGAATTTGGAAAGTCAGGACATACC +
Preference number: 3 (lower is better)
Translates to: PETGRRQQSGLE*LGQEFGKSGHT
Trigger: GGTATGTCCTGACTTTCCAAATTCTTGTCCCAAGCATTCTAACCCTGACTGCTGCCTTCTACCTGTCTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR CCA 72 bp ACGTCTTATGGCACAAGATTAAGTAGCTTGACAGTTTaGAGCCGGAGACAGGTAGAAGGCAGCAGTCAGGGT +
Preference number: 3 (lower is better)
Translates to: TSYGTRLSSLTV*SRRQVEGSSQG
Trigger: ACCCTGACTGCTGCCTTCTACCTGTCTCCGGCTCCAAACTGTCAAGCTACTTAATCTTGTGCCATAAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR GCA 72 bp TCTCTTGCATGTATTCAACTGAGAGATCATAGATCCTaGATGCCAAAACTGAGGAAGGGAGGCACCAGGGTT +
Preference number: 3 (lower is better)
Translates to: SLACIQLRDHRS*MPKLRKGGTRV
Trigger: AACCCTGGTGCCTCCCTTCCTCAGTTTTGGCATGCAGGATCTATGATCTCTCAGTTGAATACATGCAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
3UTR TCA 72 bp TTCTTCAATGGCCACTTGGTAAGGTGTCCATGCTCCTaGAAACAAATCCTCACCCATTGTCCTGTAAGACAC +
Preference number: 3 (lower is better)
Translates to: FFNGHLVRCPCS*KQILTHCPVRH
Trigger: GTGTCTTACAGGACAATGGGTGAGGATTTGTTTTCAGGAGCATGGACACCTTACCAAGTGGCCATTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
3UTR CCA 72 bp TGTATATACATGTATATACAAATATGGCTTGGAGGATaGGGGAAGGTTCAATGGTTTGTAAAGTTTCAAAGA +
Preference number: 3 (lower is better)
Translates to: CIYMYIQIWLGG*GKVQWFVKFQR
Trigger: TCTTTGAAACTTTACAAACCATTGAACCTTCCCCCATCCTCCAAGCCATATTTGTATATACATGTATATACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR GCA 90 bp CTCATCTCTTCGCTTGCACGGCCCCGAGTTTCCCTTGACCGTCTGTCTCCCAGTCTCCGCAGGGCTGTGTaGTGCCATGCCAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: LISSLARPRVSLDRLSPSLRRAV*CHARYS
Trigger: CGAGTACCTGGCATGGCAGCACACAGCCCTGCGGAG...ACTGGGAGACAGACGGTCAAGGGAAACTCGGGGCCGTGCAAGCGAAGAGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR GCA 90 bp CCAAAACTGAGGAAGGGAGGCACCAGGGTTGAGGAGCACAGAGGGTCACGTGGTGGCTGTGTGCTGCCATaGCAGGTACTCGTCTACACG +
Preference number: 4 (lower is better)
Translates to: PKLRKGGTRVEEHRGSRGGCVLP*QVLVYT
Trigger: CGTGTAGACGAGTACCTGGCATGGCAGCACACAGCC...ACCACGTGACCCTCTGTGCTCCTCAACCCTGGTGCCTCCCTTCCTCAGTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR GCA 90 bp GCCATGCCAGGTACTCGTCTACACGAGCTCGAGTCTGCAGATCCTGAGGGTACCCTCCGTACAGAAGGCTaGACACTTCCCAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: AMPGTRLHELESADPEGTLRTEG*TLPSLP
Trigger: TGGCAGGCTGGGAAGTGTGCAGCCTTCTGTACGGAG...GGTACCCTCAGGATCTGCAGACTCGAGCTCGTGTAGACGAGTACCTGGCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS-3UTR CCA 90 bp CCACTCCCACAAAGGAACCAGCCCTGCACCCCACCTATGGCAGGAAGCAAAGACACTTCATGGGCCTCCTaGAAGAGGCTCTCCCCCACT +
Preference number: 4 (lower is better)
Translates to: PLPQRNQPCTPPMAGSKDTSWAS*KRLSPT
Trigger: AGTGGGGGAGAGCCTCTTCCAGGAGGCCCATGAAGT...GTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTTGTGGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR GCA 90 bp ACCAGTGGTCGGGGGCCTTGTACTTTCTACTCAGATACAACAAGATGGCCACACCAGTCACCCACCCGCTaGAGAGGTGGGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TSGRGPCTFYSDTTRWPHQSPTR*RGGRCS
Trigger: GGAGCACCTCCCACCTCTGCAGCGGGTGGGTGACTG...GTGTGGCCATCTTGTTGTATCTGAGTAGAAAGTACAAGGCCCCCGACCACTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS-3UTR TCA 90 bp ACTCCCACAAAGGAACCAGCCCTGCACCCCACCTATGGCAGGAAGCAAAGACGCTTTTGCAGCCAGCACTaGCAGGATGCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TPTKEPALHPTYGRKQRRFCSQH*QDASAL
Trigger: CAGAGCTGATGCATCCTGTCAGTGCTGGCTGCAAAA...GCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTTGTGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR GCA 90 bp CACTCCCACAAAGGAACCAGCCCTGCACCCCACCTATGGCAGGAAGCAAAGACGGGGAACATCATCTTCTaGCACATGGCCCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: HSHKGTSPAPHLWQEAKTGNIIF*HMALVQ
Trigger: TTGCACCAGGGCCATGTGGCAGAAGATGATGTTCCC...CGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTTGTGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR GCA 90 bp AAAGGAACCAGCCCTGCACCCCACCTATGGCAGGAAGCAAAGACGCAGAGGACACCAGCACTGACAGGATaGATCAGCTCTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: KGTSPAPHLWQEAKTQRTPALTG*ISSVMA
Trigger: GGCCATCACAGAGCTGATGCATCCTGTCAGTGCTGG...TGTCCTCTGCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR CCA 90 bp CCCTGCACCCCACCTATGGCAGGAAGCAAAGACGCAGAGGACAAAGGTCTTTCACCAGTTCAGCCAAGGTaGATGCCAGCATCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PCTPPMAGSKDAEDKGLSPVQPR*MPASQE
Trigger: CTCCTGAGATGCTGGCATCCACCTTGGCTGAACTGG...TGAAAGACCTTTGTCCTCTGCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR TCA 90 bp CCTCACCCATTGTCCTGTAAGACACACACACAAAGAGACACAGACACAGACACAGCGCCAAGGGAGGAGTaGCTTATCCAGGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PHPLSCKTHTQRDTDTDTAPREE*LIQGPR
Trigger: TCTGGGGCCCTGGATAAGTCACTCCTCCCTTGGCGC...TGTGTCTGTGTCTGTGTCTCTTTGTGTGTGTGTCTTACAGGACAATGGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
CDS-3UTR CCA 90 bp ATTGCGGACCAGAGACCCTATGTCCTAGTGACAGCCAAAGAGCCAGACAGCCTCTCATCTTCTGCCACATaGCCCTGGTGCAACAACTCC +
Preference number: 4 (lower is better)
Translates to: IADQRPYVLVTAKEPDSLSSSAT*PWCNNS
Trigger: GGAGTTGTTGCACCAGGGCCATGTGGCAGAAGATGA...GAGGCTGTCTGGCTCTTTGGCTGTCACTAGGACATAGGGTCTCTGGTCCGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR TCA 90 bp CCACTCCCACAAAGGAACCAGCCCTGCACCCCACCTATGGCAGGAAGCAAAGACGAATCTGTGTACTGCTaGCCTTTAAGCAGCTCTATG +
Preference number: 4 (lower is better)
Translates to: PLPQRNQPCTPPMAGSKDESVYC*PLSSSM
Trigger: CATAGAGCTGCTTAAAGGTCAGCAGTACACAGATTC...GTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTTGTGGGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR GCA 90 bp ACCAGTGGTCGGGGGCCTTGTACTTTCTACTCAGATACAACAAGATGGCCACACGCACACTTCCCAGCCTaGCAACTGAGCCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: TSGRGPCTFYSDTTRWPHAHFPA*QLSPPL
Trigger: TAAAGGTGGGCTCAGTTGGCAGGCTGGGAAGTGTGC...GTGTGGCCATCTTGTTGTATCTGAGTAGAAAGTACAAGGCCCCCGACCACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS-3UTR TCA 90 bp CCCTCTCTGAGGATGATGGTTAGGAGGAAGGGACGATTTCTTCAATGGCCACTTCATGCATCAGCTCTGTaGTGGCCACCAAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSLRMMVRRKGRFLQWPLHASAL*WPPSQP
Trigger: TGGCTGACTTGGTGGCCATCACAGAGCTGATGCATG...AAGTGGCCATTGAAGAAATCGTCCCTTCCTCCTAACCATCATCCTCAGAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
CDS-3UTR GCA 90 bp AAAGGAACCAGCCCTGCACCCCACCTATGGCAGGAAGCAAAGACGCAGAGGACACAGTGTAACAAACACTaGACAGAGAGCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KGTSPAPHLWQEAKTQRTQCNKH*TESFSF
Trigger: GAAGCTGAAGCTCTCTGTGCAGTGTTTGTTACACTG...TGTCCTCTGCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGGCTGGTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR GCA 90 bp ATCCTCACCCATTGTCCTGTAAGACACACACACAAAGAGACACAGACACAGACAGGCTGTGTGCTGCCATaGCAGGTACTCGTCTACACG +
Preference number: 4 (lower is better)
Translates to: ILTHCPVRHTHKETQTQTGCVLP*QVLVYT
Trigger: CGTGTAGACGAGTACCTGGCATGGCAGCACACAGCC...TGTCTGTGTCTGTGTCTCTTTGTGTGTGTGTCTTACAGGACAATGGGTGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
CDS-3UTR GCA 90 bp CTGAAAACAAATCCTCACCCATTGTCCTGTAAGACACACACACAAAGAGACACACTCCGCAGGGCTGTGTaGTGCCATGCCAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: LKTNPHPLSCKTHTQRDTLRRAV*CHARYS
Trigger: CGAGTACCTGGCATGGCAGCACACAGCCCTGCGGAG...TGTGTCTCTTTGTGTGTGTGTCTTACAGGACAATGGGTGAGGATTTGTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
CDS-3UTR CCA 90 bp CTGAGGATGATGGTTAGGAGGAAGGGACGATTTCTTCAATGGCCACTTGGTAAGCCAGTTCAGCCAAGGTaGATGCCAGCATCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LRMMVRRKGRFLQWPLGKPVQPR*MPASQE
Trigger: CTCCTGAGATGCTGGCATCCACCTTGGCTGAACTGG...CTTACCAAGTGGCCATTGAAGAAATCGTCCCTTCCTCCTAACCATCATCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
CDS-3UTR GCA 90 bp AGGAAGCAAAGACGCAGAGGACAAAGGTCTTTCACTAGTCAATCCCCGTCTCTTTTCAGCCAAGGTGGATaGCAGCATCTCAGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: RKQRRRGQRSFTSQSPSLFSQGG*QHLRRY
Trigger: GTACCTCCTGAGATGCTGGCATCCACCTTGGCTGAA...AAGAGACGGGGATTGACTAGTGAAAGACCTTTGTCCTCTGCGTCTTTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR GCA 90 bp CTGAGGATGATGGTTAGGAGGAAGGGACGATTTCTTCAATGGCCACTTGGTAAGTTCAGCCAAGGTGGATaGCAGCATCTCAGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LRMMVRRKGRFLQWPLGKFSQGG*QHLRRY
Trigger: GTACCTCCTGAGATGCTGGCATCCACCTTGGCTGAA...CTTACCAAGTGGCCATTGAAGAAATCGTCCCTTCCTCCTAACCATCATCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
CDS-3UTR CCA 90 bp TCTCTGAGGATGATGGTTAGGAGGAAGGGACGATTTCTTCAATGGCCACTTGGTTCATCTTCTGCCACATaGCCCTGGTGCAACAACTCC +
Preference number: 4 (lower is better)
Translates to: SLRMMVRRKGRFLQWPLGSSSAT*PWCNNS
Trigger: GGAGTTGTTGCACCAGGGCCATGTGGCAGAAGATGA...ACCAAGTGGCCATTGAAGAAATCGTCCCTTCCTCCTAACCATCATCCTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
3UTR CAA 72 bp GAGACAGGTAGAAGGCAGCAGTCAGGGTTAGAATGCTaGGGACAAGAATTTGGAAAGTCAGGACATACCAAG +
Preference number: 4 (lower is better)
Translates to: ETGRRQQSGLEC*GQEFGKSGHTK
Trigger: CTTGGTATGTCCTGACTTTCCAAATTCTTGTCCCAAGCATTCTAACCCTGACTGCTGCCTTCTACCTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS-3UTR TCA 90 bp TACTTTCTACTCAGATACAACAAGATGGCCACACTCTCTGCCAAGACGAAGTCCATCCGGTATTGGGACTaGTGTTATTCACTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: YFLLRYNKMATLSAKTKSIRYWD*CYSLGK
Trigger: TTTTCCTAGTGAATAACATCAGTCCCAATACCGGAT...GGACTTCGTCTTGGCAGAGAGTGTGGCCATCTTGTTGTATCTGAGTAGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS-3UTR CCA 90 bp ATGGTTTGTAAAGTTTCAAAGAAAAGGAATATGGCCAGATACGTTTCTCCCAAGTTCAGGACAACTTCATaGGCCTCCTGGAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: MVCKVSKKRNMARYVSPKFRTTS*ASWKRL
Trigger: GAGCCTCTTCCAGGAGGCCCATGAAGTTGTCCTGAA...CTTGGGAGAAACGTATCTGGCCATATTCCTTTTCTTTGAAACTTTACAAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS GCA 90 bp CACACCTGGCCTGGCCAGTCACCCACCCGCTGCAGAGGTGGGAGGTaGTCCGTACAGAAGGCTGCACACTTCCCAGCCTGCCAACTGAGC +
Preference number: 5 (lower is better)
Translates to: HTWPGQSPTRCRGGR*SVQKAAHFPACQLS
Trigger: GCTCAGTTGGCAGGCTGGGAAGTGTGCAGCCTTCTGTACGGAGCACCTCCCACCTCTGCAGCGGGTGGGTGACTGGCCAGGCCAGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS GCA 90 bp CGGGAGCGGCTTTTGCACACCTGGCCTGGCCAGTCACCCACCCGCTaGAGAGGTGGGAGGTGCTCCGTACAGAAGGCTGCACACTTCCCA +
Preference number: 5 (lower is better)
Translates to: RERLLHTWPGQSPTR*RGGRCSVQKAAHFP
Trigger: TGGGAAGTGTGCAGCCTTCTGTACGGAGCACCTCCCACCTCTGCAGCGGGTGGGTGACTGGCCAGGCCAGGTGTGCAAAAGCCGCTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS CCA 90 bp GCTTTTGCACACCTGGCCTGGCCAGTCACCCACCCGCTGCAGAGGTaGGAGGTGCTCCGTACAGAAGGCTGCACACTTCCCAGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: AFAHLAWPVTHPLQR*EVLRTEGCTLPSLP
Trigger: TGGCAGGCTGGGAAGTGTGCAGCCTTCTGTACGGAGCACCTCCCACCTCTGCAGCGGGTGGGTGACTGGCCAGGCCAGGTGTGCAAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS GCA 90 bp GTCACCCACCCGCTGCAGAGGTGGGAGGTGCTCCGTACAGAAGGCTaGACACTTCCCAGCCTGCCAACTGAGCCCACCTTTAAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VTHPLQRWEVLRTEG*TLPSLPTEPTFKQL
Trigger: GAGCTGCTTAAAGGTGGGCTCAGTTGGCAGGCTGGGAAGTGTGCAGCCTTCTGTACGGAGCACCTCCCACCTCTGCAGCGGGTGGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS GCA 90 bp TCAGGAGGTACGGGCTGTCCCAGGAACACAGGGAACATCATCTTCTaGCACATGGCCCTGGTGCAACAACTCCGCAGGGCTGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SGGTGCPRNTGNIIF*HMALVQQLRRAVCC
Trigger: GCAGCACACAGCCCTGCGGAGTTGTTGCACCAGGGCCATGTGGCAGAAGATGATGTTCCCTGTGTTCCTGGGACAGCCCGTACCTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001715.10
ENSMUST00000133869.2
ENSMUST00000173537.2
CDS-3UTR CAA 90 bp CCCTGCACCCCACCTATGGCAGGAAGCAAAGACGCAGAGGACAAAGGTCTTTCACAGTGGTCGGGGGCCTaGTACTTTCTACTCAGATAC +
Preference number: 5 (lower is better)
Translates to: PCTPPMAGSKDAEDKGLSQWSGA*YFLLRY
Trigger: GTATCTGAGTAGAAAGTACAAGGCCCCCGACCACTG...TGAAAGACCTTTGTCCTCTGCGTCTTTGCTTCCTGCCATAGGTGGGGTGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS GCA 72 bp CCTGGCCAGTCACCCACCCGCTGCAGAGGTGGGAGGTaGTCCGTACAGAAGGCTGCACACTTCCCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: PGQSPTRCRGGR*SVQKAAHFPAC
Trigger: GCAGGCTGGGAAGTGTGCAGCCTTCTGTACGGAGCACCTCCCACCTCTGCAGCGGGTGGGTGACTGGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS CCA 72 bp TGCTTTCTCACGGGAGCGGCTTTTGCACACCTGGCCTaGCCAGTCACCCACCCGCTGCAGAGGTGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: CFLTGAAFAHLA*PVTHPLQRWEV
Trigger: CACCTCCCACCTCTGCAGCGGGTGGGTGACTGGCCAGGCCAGGTGTGCAAAAGCCGCTCCCGTGAGAAAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS CCA 72 bp ACAACTGCTTTCTCACGGGAGCGGCTTTTGCACACCTaGCCTGGCCAGTCACCCACCCGCTGCAGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: TTAFSRERLLHT*PGQSPTRCRGG
Trigger: CCCACCTCTGCAGCGGGTGGGTGACTGGCCAGGCCAGGTGTGCAAAAGCCGCTCCCGTGAGAAAGCAGTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS GCA 72 bp CCGCTGCAGAGGTGGGAGGTGCTCCGTACAGAAGGCTaGACACTTCCCAGCCTGCCAACTGAGCCCACCTTT +
Preference number: 6 (lower is better)
Translates to: PLQRWEVLRTEG*TLPSLPTEPTF
Trigger: AAAGGTGGGCTCAGTTGGCAGGCTGGGAAGTGTGCAGCCTTCTGTACGGAGCACCTCCCACCTCTGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS GCA 72 bp CACCTGCAGGCACCCATCCAGTTCAGCCAAGGTGGATaGCAGCATCTCAGGAGGTACGGGCTGTCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: HLQAPIQFSQGG*QHLRRYGLSQE
Trigger: TTCCTGGGACAGCCCGTACCTCCTGAGATGCTGGCATCCACCTTGGCTGAACTGGATGGGTGCCTGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001715.10
ENSMUST00000133869.2
ENSMUST00000173537.2
CDS CCA 72 bp CTAGCACCTGCAGGCACCCATCCAGTTCAGCCAAGGTaGATGCCAGCATCTCAGGAGGTACGGGCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: LAPAGTHPVQPR*MPASQEVRAVP
Trigger: TGGGACAGCCCGTACCTCCTGAGATGCTGGCATCCACCTTGGCTGAACTGGATGGGTGCCTGCAGGTGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001715.10
ENSMUST00000133869.2
ENSMUST00000173537.2
CDS GCA 72 bp ACGGGCTGTCCCAGGAACACAGGGAACATCATCTTCTaGCACATGGCCCTGGTGCAACAACTCCGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TGCPRNTGNIIF*HMALVQQLRRA
Trigger: AGCCCTGCGGAGTTGTTGCACCAGGGCCATGTGGCAGAAGATGATGTTCCCTGTGTTCCTGGGACAGCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001715.10
ENSMUST00000133869.2
ENSMUST00000173537.2
CDS CAA 72 bp ATAACTGATACAACTGCTTTCTCACGGGAGCGGCTTTaGCACACCTGGCCTGGCCAGTCACCCACCCGCTGC +
Preference number: 6 (lower is better)
Translates to: ITDTTAFSRERL*HTWPGQSPTRC
Trigger: GCAGCGGGTGGGTGACTGGCCAGGCCAGGTGTGCAAAAGCCGCTCCCGTGAGAAAGCAGTTGTATCAGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS TCA 72 bp TTAGAGATGAGGAAGGTGAAGGCGCCAAGGGAGGAGTaGCTTATCCAGGGCCCCAGAGCCAGAAAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LEMRKVKAPREE*LIQGPRARKGS
Trigger: GCTGCCTTTTCTGGCTCTGGGGCCCTGGATAAGTCACTCCTCCCTTGGCGCCTTCACCTTCCTCATCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133869.2
CDS GCA 72 bp AGGTGCTCCGTACAGAAGGCTGCACACTTCCCAGCCTaGCAACTGAGCCCACCTTTAAGCAGCTCTATGGTA +
Preference number: 6 (lower is better)
Translates to: RCSVQKAAHFPA*QLSPPLSSSMV
Trigger: TACCATAGAGCTGCTTAAAGGTGGGCTCAGTTGGCAGGCTGGGAAGTGTGCAGCCTTCTGTACGGAGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174187.2
CDS GCA 72 bp CGGCTCTCAAAGATTTTGCAGCCAGCACTGACAGGATaGATCAGCTCTGTGATGGCCACCAAGTCAGCCACA +
Preference number: 6 (lower is better)
Translates to: RLSKILQPALTG*ISSVMATKSAT
Trigger: TGTGGCTGACTTGGTGGCCATCACAGAGCTGATGCATCCTGTCAGTGCTGGCTGCAAAATCTTTGAGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001715.10
CDS CAA 72 bp GCTCTCAAAGATTTTGCAGCCAGCACTGACAGGCCATaGTCATGCATCAGCTCTGTGATGGCCACCAAGTCA +
Preference number: 6 (lower is better)
Translates to: ALKDFAASTDRP*SCISSVMATKS
Trigger: TGACTTGGTGGCCATCACAGAGCTGATGCATGACAATGGCCTGTCAGTGCTGGCTGCAAAATCTTTGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173537.2