Pregenerated sensors for GSTM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004032Ensembl transcript IDs: ENSMUST00000004134.11, ENSMUST00000167523.8, ENSMUST00000169365.2, ENSMUST00000170058.8
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGGCTCAGCAGCAGCGAGCTCTGGCTCAGCATAAGCACTTGTTACCCCACTTGGTGTTCTTCCCGTCCATaGGGTAGGGCAGCTAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: WLSSSELWLSISTCYPTWCSSRP*GRAARR Trigger: CCTTCTAGCTGCCCTACCTCATGGACGGGAAGAACA...CCAAGTGGGGTAACAAGTGCTTATGCTGAGCCAGAGCTCGCTGCTGCTGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167523.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGGCCCCTGGAGCCTTGAGTTTCTaGAAAGATGGGCCTGAACAG | + |
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Preference number: 2 (lower is better) Translates to: ALRTGWNKTDSELRVWAPGALSF*KDGPEQ Trigger: CTGTTCAGGCCCATCTTTGCAGAAACTCAAGGCTCC...AGGGGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170058.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCAGCAGCGAGCTCTGGCTCAGCATAAGCACTTGTTACCCCACTTGGCCACTCCTGCAAACCATGTaGATTTCCCCAGGAACAATG | + |
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Preference number: 2 (lower is better) Translates to: LSSSELWLSISTCYPTWPLLQTM*ISPGTM Trigger: CATTGTTCCTGGGGAAATTCACATGGTTTGCAGGAG...TGGCCAAGTGGGGTAACAAGTGCTTATGCTGAGCCAGAGCTCGCTGCTGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGCTCAGCAGCAGCGAGCTCTGGCTCAGCATAAGCACTTGTTACCCCACTTGCATGTTGTGCTTGCGTaGGATGTATCTCAGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: MAQQQRALAQHKHLLPHLHVVLA*DVSQDG Trigger: GCCATCCTGAGATACATCGCACGCAAGCACAACATG...CAAGTGGGGTAACAAGTGCTTATGCTGAGCCAGAGCTCGCTGCTGCTGAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTCAGCAGCAGCGAGCTCTGGCTCAGCATAAGCACTTGTTACCCCACTTGGTCACCACACATGTTGTaGTTGCGTGCGATGTATCTC | + |
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Preference number: 2 (lower is better) Translates to: WLSSSELWLSISTCYPTWSPHML*LRAMYL Trigger: GAGATACATCGCACGCAAGCACAACATGTGTGGTGA...CCAAGTGGGGTAACAAGTGCTTATGCTGAGCCAGAGCTCGCTGCTGCTGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGCGAGCTCTGGCTCAGCATAAGCACTTGTTACCCCACTTGGCCATCTTGCTCCTGCAAACCATGTaGATTTCCCCAGGAACAATG | + |
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Preference number: 2 (lower is better) Translates to: QQRALAQHKHLLPHLAILLLQTM*ISPGTM Trigger: CATTGTTCCTGGGGAAATTCACATGGTTTGCAGGAG...CAAGATGGCCAAGTGGGGTAACAAGTGCTTATGCTGAGCCAGAGCTCGCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGCTCAGCAGCAGCGAGCTCTGGCTCAGCATAAGCACTTGTTACCCCACTTGCACACATGTTGTGCTTaGGTGCGATGTATCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: MAQQQRALAQHKHLLPHLHTCCA*VRCISG Trigger: TCCTGAGATACATCGCACGCAAGCACAACATGTGTG...CAAGTGGGGTAACAAGTGCTTATGCTGAGCCAGAGCTCGCTGCTGCTGAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGGCCCCTGGTCAGCTTTTCTCCTaGAAACCATGTGAATTTCCC | + |
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Preference number: 2 (lower is better) Translates to: ALRTGWNKTDSELRVWAPGQLFS*KPCEFP Trigger: GGGAAATTCACATGGTTTGCAGGAGAAAAGCTGACC...AGGGGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170058.8 |
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| 3UTR-3UTR CCA 90 bp | GTTATTGATTGGCATCTTGAAGAAGCGGTCAGACTGCAGGAATGCAGCAATCTTGCAGAGGAGACAGAGTaGGGGCCCTCAGGACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: VIDWHLEEAVRLQECSNLAEETE*GPSGQD Trigger: ATCCTGTCCTGAGGGCCCCCACTCTGTCTCCTCTGC...AAGATTGCTGCATTCCTGCAGTCTGACCGCTTCTTCAAGATGCCAATCAATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170058.8 |
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| 3UTR CAA 90 bp | CGAGCTCTGGCTCAGCATAAGCACTTGTTACCCCACTTGGCCATCTaGTTATTGATTGGCATCTTGAAGAAGCGGTCAGACTGCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RALAQHKHLLPHLAI*LLIGILKKRSDCRN Trigger: ATTCCTGCAGTCTGACCGCTTCTTCAAGATGCCAATCAATAACAAGATGGCCAAGTGGGGTAACAAGTGCTTATGCTGAGCCAGAGCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR-3UTR GCA 90 bp | GTTATTGATTGGCATCTTGAAGAAGCGGTCAGACTGCAGGAATGCAGCAATCTTCATGTTGTGCTTGCGTaGGATGTATCTCAGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: VIDWHLEEAVRLQECSNLHVVLA*DVSQDG Trigger: GCCATCCTGAGATACATCGCACGCAAGCACAACATG...AAGATTGCTGCATTCCTGCAGTCTGACCGCTTCTTCAAGATGCCAATCAATAAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGGCATCTTGAAGAAGCGGTCAGACTGCAGGAATGCAGCAATCTTCTCCAAATTTCCCCAGGAACAATaGGAATTGTTTCAGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: IGILKKRSDCRNAAIFSKFPQEQ*ELFQLC Trigger: GCACAGCTGAAACAATTCTCATTGTTCCTGGGGAAA...TTTGGAGAAGATTGCTGCATTCCTGCAGTCTGACCGCTTCTTCAAGATGCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR CCA 72 bp | AGCAGAGGAGACAGAGTGGGGGCCCTCAGGACAGGATaGAACAAGACTGACAGTGAGCTAAGAGTGTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: SRGDRVGALRTG*NKTDSELRVWA Trigger: GGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCACTCTGTCTCCTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 ENSMUST00000170058.8 |
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| 3UTR CCA 72 bp | ACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTaGGCCCCTCAGGGCAAGATGGCTCAGCAGCAGCGA | + |
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Preference number: 3 (lower is better) Translates to: TGWNKTDSELRV*APQGKMAQQQR Trigger: TCGCTGCTGCTGAGCCATCTTGCCCTGAGGGGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 ENSMUST00000170058.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCTCAGCAGCAGCGAGCTCTGGCTCAGCATAAGCACTTGTTACCCCACTTGGGTGTCACCACACATGTaGTGCTTGCGTGCGATGTAT | + |
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Preference number: 3 (lower is better) Translates to: WLSSSELWLSISTCYPTWVSPHM*CLRAMY Trigger: ATACATCGCACGCAAGCACAACATGTGTGGTGACAC...CCAAGTGGGGTAACAAGTGCTTATGCTGAGCCAGAGCTCGCTGCTGCTGAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGGCCCCTTTTCACGTCCAGCCATaGGCTTCTATCATAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: ALRTGWNKTDSELRVWAPFHVQP*ASIIVR Trigger: CCTGACTATGATAGAAGCCAATGGCTGGACGTGAAA...AGGGGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170058.8 |
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| 3UTR TCA 72 bp | ATAGTCAGGAGCCTTGAGTTTCTGCAAAGATGGGCCTaGACAGCAAGAGATAACTCTATGGGCCTCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: IVRSLEFLQRWA*TARDNSMGLSW Trigger: CCAAGAGAGGCCCATAGAGTTATCTCTTGCTGTTCAGGCCCATCTTTGCAGAAACTCAAGGCTCCTGACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170058.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAGAAAATCCACAAAGGTCAGCTTTTCTCCTGCAAACCATGTGAATTTCCCCCCACACATGTTGTGCTaGCGTGCGATGTATCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: VRKSTKVSFSPANHVNFPPHMLC*RAMYLR Trigger: CCTGAGATACATCGCACGCAAGCACAACATGTGTGG...GGGGAAATTCACATGGTTTGCAGGAGAAAAGCTGACCTTTGTGGATTTTCTCAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| CDS-3UTR TCA 90 bp | GTGGGGGCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGAGCATGCGGATAGCATaGGCCAGCCCGCGGATATCC | + |
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Preference number: 4 (lower is better) Translates to: VGALRTGWNKTDSELRVWSMRIA*ASPRIS Trigger: GGATATCCGCGGGCTGGCTCATGCTATCCGCATGCT...CCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000170058.8 |
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| CDS-3UTR GCA 90 bp | GCTAAGAGTGTGGGCCCCTCAGGGCAAGATGGCTCAGCAGCAGCGAGCTCTGGCTCACCACACATGTTGTaGTTGCGTGCGATGTATCTC | + |
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Preference number: 4 (lower is better) Translates to: AKSVGPSGQDGSAAASSGSPHML*LRAMYL Trigger: GAGATACATCGCACGCAAGCACAACATGTGTGGTGA...GCCAGAGCTCGCTGCTGCTGAGCCATCTTGCCCTGAGGGGCCCACACTCTTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR CCA 90 bp | AAGAGCAGAGGAGACAGAGTGGGGGCCCTCAGGACAGGATGGAACAAGACTGACGGTCCCACACCATCTTaGTGTGGTACAACCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSRGDRVGALRTGWNKTDGPTPS*CGTTLW Trigger: CCAGAGGGTTGTACCACACCAAGATGGTGTGGGACC...GTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCACTCTGTCTCCTCTGCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170058.8 |
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| CDS-3UTR GCA 90 bp | GTGGGGGCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGCATGTTGTGCTTGCGTaGGATGTATCTCAGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: VGALRTGWNKTDSELRVWHVVLA*DVSQDG Trigger: GCCATCCTGAGATACATCGCACGCAAGCACAACATG...CCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR GCA 90 bp | GACAGTGAGCTAAGAGTGTGGGCCCCTCAGGGCAAGATGGCTCAGCAGCAGCGAGGTCAGCTTTTCTCCTaGAAACCATGTGAATTTCCC | + |
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Preference number: 4 (lower is better) Translates to: DSELRVWAPQGKMAQQQRGQLFS*KPCEFP Trigger: GGGAAATTCACATGGTTTGCAGGAGAAAAGCTGACC...TCGCTGCTGCTGAGCCATCTTGCCCTGAGGGGCCCACACTCTTAGCTCACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR CCA 90 bp | ACTGACAGTGAGCTAAGAGTGTGGGCCCCTCAGGGCAAGATGGCTCAGCAGCAGCACACCATCTTGGTGTaGTACAACCCTCTGGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: TDSELRVWAPQGKMAQQQHTILV*YNPLGK Trigger: TTTACCCAGAGGGTTGTACCACACCAAGATGGTGTG...CTGCTGCTGAGCCATCTTGCCCTGAGGGGCCCACACTCTTAGCTCACTGTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170058.8 |
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| CDS-3UTR TCA 90 bp | ACTGACAGTGAGCTAAGAGTGTGGGCCCCTCAGGGCAAGATGGCTCAGCAGCAGTTTCCCCAGGAACAATaGGAATTGTTTCAGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: TDSELRVWAPQGKMAQQQFPQEQ*ELFQLC Trigger: GCACAGCTGAAACAATTCTCATTGTTCCTGGGGAAA...CTGCTGCTGAGCCATCTTGCCCTGAGGGGCCCACACTCTTAGCTCACTGTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGACAGAGTGGGGGCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTTTCCCCAGGAACAATaGGAATTGTTTCAGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: EETEWGPSGQDGTRLTVSFPQEQ*ELFQLC Trigger: GCACAGCTGAAACAATTCTCATTGTTCCTGGGGAAA...GCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCACTCTGTCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR TCA 90 bp | GCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGGCCCCTCTCCTGCAAACCATGTaGATTTCCCCAGGAACAATG | + |
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Preference number: 4 (lower is better) Translates to: ALRTGWNKTDSELRVWAPLLQTM*ISPGTM Trigger: CATTGTTCCTGGGGAAATTCACATGGTTTGCAGGAG...AGGGGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR TCA 90 bp | AGAGCAGAGGAGACAGAGTGGGGGCCCTCAGGACAGGATGGAACAAGACTGACACTCCTGCAAACCATGTaGATTTCCCCAGGAACAATG | + |
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Preference number: 4 (lower is better) Translates to: RAEETEWGPSGQDGTRLTLLQTM*ISPGTM Trigger: CATTGTTCCTGGGGAAATTCACATGGTTTGCAGGAG...TGTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCACTCTGTCTCCTCTGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR GCA 90 bp | CTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGGCCCCTCAGCATGTTGTGCTTGCGTaGGATGTATCTCAGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: LRTGWNKTDSELRVWAPQHVVLA*DVSQDG Trigger: GCCATCCTGAGATACATCGCACGCAAGCACAACATG...CTGAGGGGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR GCA 90 bp | GGAGACAGAGTGGGGGCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTACACACATGTTGTGCTTaGGTGCGATGTATCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GDRVGALRTGWNKTDSELHTCCA*VRCISG Trigger: TCCTGAGATACATCGCACGCAAGCACAACATGTGTG...TAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCACTCTGTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR GCA 90 bp | AAGAGCAGAGGAGACAGAGTGGGGGCCCTCAGGACAGGATGGAACAAGACTGACCACACATGTTGTGCTTaGGTGCGATGTATCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KSRGDRVGALRTGWNKTDHTCCA*VRCISG Trigger: TCCTGAGATACATCGCACGCAAGCACAACATGTGTG...GTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCACTCTGTCTCCTCTGCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR GCA 90 bp | GCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGGCCCCTGTCAGACTGCAGGAATaGAGCAATCTTCTCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ALRTGWNKTDSELRVWAPVRLQE*SNLLQS Trigger: GCTTTGGAGAAGATTGCTGCATTCCTGCAGTCTGAC...AGGGGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR GCA 90 bp | GGAGACAGAGTGGGGGCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAGTCAGACTGCAGGAATaGAGCAATCTTCTCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GDRVGALRTGWNKTDSELVRLQE*SNLLQS Trigger: GCTTTGGAGAAGATTGCTGCATTCCTGCAGTCTGAC...TAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCACTCTGTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR TCA 90 bp | ATCTTGTTATTGATTGGCATCTTGAAGAAGCGGTCAGACTGCAGGAATGCAGCAAGCATGCGGATAGCATaGGCCAGCCCGCGGATATCC | + |
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Preference number: 4 (lower is better) Translates to: ILLLIGILKKRSDCRNAASMRIA*ASPRIS Trigger: GGATATCCGCGGGCTGGCTCATGCTATCCGCATGCT...TGCTGCATTCCTGCAGTCTGACCGCTTCTTCAAGATGCCAATCAATAACAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| CDS-3UTR TCA 90 bp | GTGAGAAAATCCACAAAGGTCAGCTTTTCTCCTGCAAACCATGTGAATTTCCCCAGCATGCGGATAGCATaGGCCAGCCCGCGGATATCC | + |
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Preference number: 4 (lower is better) Translates to: VRKSTKVSFSPANHVNFPSMRIA*ASPRIS Trigger: GGATATCCGCGGGCTGGCTCATGCTATCCGCATGCT...GGGGAAATTCACATGGTTTGCAGGAGAAAAGCTGACCTTTGTGGATTTTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| 3UTR CAA 72 bp | GCTCAGCATAAGCACTTGTTACCCCACTTGGCCATCTaGTTATTGATTGGCATCTTGAAGAAGCGGTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: AQHKHLLPHLAI*LLIGILKKRSD Trigger: GTCTGACCGCTTCTTCAAGATGCCAATCAATAACAAGATGGCCAAGTGGGGTAACAAGTGCTTATGCTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167523.8 ENSMUST00000170058.8 |
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| CDS-3UTR CAA 90 bp | GACAGTGAGCTAAGAGTGTGGGCCCCTCAGGGCAAGATGGCTCAGCAGCAGCGATTTCACGTCCAGCCATaGGCTTCTATCATAGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: DSELRVWAPQGKMAQQQRFHVQP*ASIIVR Trigger: CCTGACTATGATAGAAGCCAATGGCTGGACGTGAAA...TCGCTGCTGCTGAGCCATCTTGCCCTGAGGGGCCCACACTCTTAGCTCACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004134.11 |
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| CDS-3UTR CAA 90 bp | GTGGGGGCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGCCACACATGTTGTGCTaGCGTGCGATGTATCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: VGALRTGWNKTDSELRVWPHMLC*RAMYLR Trigger: CCTGAGATACATCGCACGCAAGCACAACATGTGTGG...CCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGCCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR CAA 90 bp | ACTGACAGTGAGCTAAGAGTGTGGGCCCCTCAGGGCAAGATGGCTCAGCAGCAGGTGTCACCACACATGTaGTGCTTGCGTGCGATGTAT | + |
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Preference number: 5 (lower is better) Translates to: TDSELRVWAPQGKMAQQQVSPHM*CLRAMY Trigger: ATACATCGCACGCAAGCACAACATGTGTGGTGACAC...CTGCTGCTGAGCCATCTTGCCCTGAGGGGCCCACACTCTTAGCTCACTGTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR CAA 90 bp | GACAGTGAGCTAAGAGTGTGGGCCCCTCAGGGCAAGATGGCTCAGCAGCAGCGACCCCACTTGGCCATCTaGTTATTGATTGGCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: DSELRVWAPQGKMAQQQRPHLAI*LLIGIL Trigger: CAAGATGCCAATCAATAACAAGATGGCCAAGTGGGG...TCGCTGCTGCTGAGCCATCTTGCCCTGAGGGGCCCACACTCTTAGCTCACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGGCCCCTCAGCCACACATGTTGTGCTaGCGTGCGATGTATCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LRTGWNKTDSELRVWAPQPHMLC*RAMYLR Trigger: CCTGAGATACATCGCACGCAAGCACAACATGTGTGG...CTGAGGGGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR CAA 90 bp | GCCCTCAGGACAGGATGGAACAAGACTGACAGTGAGCTAAGAGTGTGGGCCCCTCCCCACTTGGCCATCTaGTTATTGATTGGCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: ALRTGWNKTDSELRVWAPPHLAI*LLIGIL Trigger: CAAGATGCCAATCAATAACAAGATGGCCAAGTGGGG...AGGGGCCCACACTCTTAGCTCACTGTCAGTCTTGTTCCATCCTGTCCTGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004134.11 ENSMUST00000169365.2 |
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| CDS-3UTR CAA 90 bp | TTCCAAGTACTGAGGCTTCAGGTTTTCGTGGTTAGAATTGTAGCAGAGGCGAACTTTCACGTCCAGCCATaGGCTTCTATCATAGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: FQVLRLQVFVVRIVAEANFHVQP*ASIIVR Trigger: CCTGACTATGATAGAAGCCAATGGCTGGACGTGAAA...GTTCGCCTCTGCTACAATTCTAACCACGAAAACCTGAAGCCTCAGTACTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167523.8 |
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