Pregenerated sensors for GSTM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004038Ensembl transcript IDs: ENSMUST00000004136.10
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGGCTGCATGGGCTTGACTGGGGTGAGGATGAGGAGATGGGGCTaGCCAAGCTGCAGAAGGGAGCGGGAAGGAGAGAGAACCGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: KGCMGLTGVRMRRWG*PSCRREREGERTGS Trigger: GCTCCCGGTTCTCTCTCCTTCCCGCTCCCTTCTGCAGCTTGGTCAGCCCCATCTCCTCATCCTCACCCCAGTCAAGCCCATGCAGCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR-3UTR GCA 90 bp | ATAGTGTTGACCATTGGGGTAACTCTAGGGAGCCTGAGTTCAGGACAGACCTCATGCAGAAGGCCAGGGTaGTGTCCCCACCCAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: IVLTIGVTLGSLSSGQTSCRRPG*CPHPEP Trigger: AGGCTCTGGGTGGGGACAGCACCCTGGCCTTCTGCA...TGAGGTCTGTCCTGAACTCAGGCTCCCTAGAGTTACCCCAATGGTCAACACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR-3UTR GCA 90 bp | GTTTCAAGTGTGTTTCAGGCTTTATTGTACATGAGACAGGCCTGGGGCAGCTCCAACCGGGAGCCACAGTaGAGAAGGCCAGGGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: VSSVFQALLYMRQAWGSSNREPQ*RRPGCC Trigger: ACAGCACCCTGGCCTTCTGCACTGTGGCTCCCGGTT...GGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCCTGAAACACACTTGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR-3UTR TCA 90 bp | CATTGGGGTAACTCTAGGGAGCCTGAGTTCAGGACAGACCTCAGATTGCAGAAAATGAGGAGATGGGGCTaGCCAAGCTGCAGAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HWGNSREPEFRTDLRLQKMRRWG*PSCRRE Trigger: CTCCCTTCTGCAGCTTGGTCAGCCCCATCTCCTCAT...TTTCTGCAATCTGAGGTCTGTCCTGAACTCAGGCTCCCTAGAGTTACCCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR-3UTR GCA 90 bp | TCAAGTGTGTTTCAGGCTTTATTGTACATGAGACAGGCCTGGGGCAGCTCCTTATCCCCACCCAGAGCCTaGAGGATCCGCAGTATGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSVFQALLYMRQAWGSSLSPPRA*RIRSMD Trigger: GTCCATACTGCGGATCCTGCAGGCTCTGGGTGGGGA...TAAGGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCCTGAAACACACTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR CAA 90 bp | CATTGGGGTAACTCTAGGGAGCCTGAGTTCAGGACAGACCTCAGATaGCAGAAAAGGGCTGTGAGGTTGGGTCTGGGCACCAATGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: HWGNSREPEFRTDLR*QKRAVRLGLGTNEE Trigger: TTCTTCATTGGTGCCCAGACCCAACCTCACAGCCCTTTTCTGCAATCTGAGGTCTGTCCTGAACTCAGGCTCCCTAGAGTTACCCCAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR-3UTR CCA 90 bp | ATAGTATTGACCATCAGGGTATCTCTAGGGAGGGCTGGCACTAAGATAGTGTTGCTGCATGGGCTTGACTaGGGTGAGGATGAGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: IVLTIRVSLGRAGTKIVLLHGLD*GEDEEM Trigger: CATCTCCTCATCCTCACCCCAGTCAAGCCCATGCAG...CAACACTATCTTAGTGCCAGCCCTCCCTAGAGATACCCTGATGGTCAATACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR CAA 90 bp | CAAGTGTTCAGTGTTTATTGTGTTTCAAGTGTGTTTCAGGCTTTATaGTACATGAGACAGGCCTGGGGCAGCTCCTTAAACAGGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: QVFSVYCVSSVFQAL*YMRQAWGSSLNRNR Trigger: CCTGTTCCTGTTTAAGGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCCTGAAACACACTTGAAACACAATAAACACTGAACACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR GCA 72 bp | AGAGAGAACCGGGAGCCACAGTGCAGAAGGCCAGGGTaGTGTCCCCACCCAGAGCCTGCAGGATCCGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: RENREPQCRRPG*CPHPEPAGSAV Trigger: TACTGCGGATCCTGCAGGCTCTGGGTGGGGACAGCACCCTGGCCTTCTGCACTGTGGCTCCCGGTTCTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR TCA 72 bp | AGTTCAGGACAGACCTCAGATTGCAGAAAAGGGCTGTaGGGTTGGGTCTGGGCACCAATGAAGAAGGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: SSGQTSDCRKGL*GWVWAPMKKGP Trigger: TGGCCCCTTCTTCATTGGTGCCCAGACCCAACCTCACAGCCCTTTTCTGCAATCTGAGGTCTGTCCTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR-3UTR CAA 90 bp | TTGACCATTGGGGTAACTCTAGGGAGCCTGAGTTCAGGACAGACCTCAGATTGCAAAAGGGCTGTGAGGTaGGGTCTGGGCACCAATGAA | + |
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Preference number: 3 (lower is better) Translates to: LTIGVTLGSLSSGQTSDCKRAVR*GLGTNE Trigger: TTCATTGGTGCCCAGACCCAACCTCACAGCCCTTTT...GCAATCTGAGGTCTGTCCTGAACTCAGGCTCCCTAGAGTTACCCCAATGGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR CCA 72 bp | AGTGTGTTTCAGGCTTTATTGTACATGAGACAGGCCTaGGGCAGCTCCTTAAACAGGAACAGGCTGGCACTC | + |
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Preference number: 3 (lower is better) Translates to: SVFQALLYMRQA*GSSLNRNRLAL Trigger: GAGTGCCAGCCTGTTCCTGTTTAAGGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCCTGAAACACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR-3UTR CAA 90 bp | ATAGTATTGACCATCAGGGTATCTCTAGGGAGGGCTGGCACTAAGATAGTGTTGAGGACAGACCTCAGATaGCAGAAAAGGGCTGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: IVLTIRVSLGRAGTKIVLRTDLR*QKRAVR Trigger: CCTCACAGCCCTTTTCTGCAATCTGAGGTCTGTCCT...CAACACTATCTTAGTGCCAGCCCTCCCTAGAGATACCCTGATGGTCAATACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| CDS-3UTR TCA 90 bp | GGCTTTATTGTACATGAGACAGGCCTGGGGCAGCTCCTTAAACAGGAACAGGCTTGGGGGCATCCCCCATaGCATATCTCTTCTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: GFIVHETGLGQLLKQEQAWGHPP*HISSPH Trigger: ATGAGGAGAAGAGATATGTCATGGGGGATGCCCCCA...AGCCTGTTCCTGTTTAAGGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| 3UTR CAA 72 bp | AGGGTATCTCTAGGGAGGGCTGGCACTAAGATAGTGTaGACCATTGGGGTAACTCTAGGGAGCCTGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RVSLGRAGTKIV*TIGVTLGSLSS Trigger: TGAACTCAGGCTCCCTAGAGTTACCCCAATGGTCAACACTATCTTAGTGCCAGCCCTCCCTAGAGATACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| CDS-3UTR CCA 90 bp | TCAAGTGTGTTTCAGGCTTTATTGTACATGAGACAGGCCTGGGGCAGCTCCTTAAGGCGTCCAGGCACTTaGGCTCAAACATACGATACT | + |
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Preference number: 4 (lower is better) Translates to: SSVFQALLYMRQAWGSSLRRPGT*AQTYDT Trigger: AGTATCGTATGTTTGAGCCCAAGTGCCTGGACGCCT...TAAGGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCCTGAAACACACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| CDS-3UTR CCA 90 bp | GTTTCAAGTGTGTTTCAGGCTTTATTGTACATGAGACAGGCCTGGGGCAGCTCCCGGGTGTCCATAACTTaGTTCTCCAAAGTATCCACA | + |
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Preference number: 4 (lower is better) Translates to: VSSVFQALLYMRQAWGSSRVSIT*FSKVST Trigger: TGTGGATACTTTGGAGAACCAAGTTATGGACACCCG...GGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCCTGAAACACACTTGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| CDS-3UTR CCA 90 bp | ATAGTGTTGACCATTGGGGTAACTCTAGGGAGCCTGAGTTCAGGACAGACCTCAGGCCTTCAAGAACTCTaGCTTCTGCTTCTCAAAATC | + |
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Preference number: 4 (lower is better) Translates to: IVLTIGVTLGSLSSGQTSGLQEL*LLLLKI Trigger: GATTTTGAGAAGCAGAAGCCAGAGTTCTTGAAGGCC...TGAGGTCTGTCCTGAACTCAGGCTCCCTAGAGTTACCCCAATGGTCAACACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| CDS-3UTR GCA 90 bp | GTTTCAGGCTTTATTGTACATGAGACAGGCCTGGGGCAGCTCCTTAAACAGGAAAAGAACTCTGGCTTCTaGTTCTCAAAATCGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: VSGFIVHETGLGQLLKQEKNSGF*FSKSGL Trigger: CAGTCCCGATTTTGAGAAGCAGAAGCCAGAGTTCTT...TTCCTGTTTAAGGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCCTGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| CDS-3UTR CAA 90 bp | CATTGGGGTAACTCTAGGGAGCCTGAGTTCAGGACAGACCTCAGATTGCAGAAAGCGGGTGTCCATAACTaGGTTCTCCAAAGTATCCAC | + |
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Preference number: 5 (lower is better) Translates to: HWGNSREPEFRTDLRLQKAGVHN*VLQSIH Trigger: GTGGATACTTTGGAGAACCAAGTTATGGACACCCGC...TTTCTGCAATCTGAGGTCTGTCCTGAACTCAGGCTCCCTAGAGTTACCCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| CDS-3UTR CAA 90 bp | TCAAGTGTGTTTCAGGCTTTATTGTACATGAGACAGGCCTGGGGCAGCTCCTTAAAGGCGTCCAGGCACTaGGGCTCAAACATACGATAC | + |
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Preference number: 5 (lower is better) Translates to: SSVFQALLYMRQAWGSSLKASRH*GSNIRY Trigger: GTATCGTATGTTTGAGCCCAAGTGCCTGGACGCCTT...TAAGGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCCTGAAACACACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| CDS-3UTR CAA 90 bp | GGCTTTATTGTACATGAGACAGGCCTGGGGCAGCTCCTTAAACAGGAACAGGCTAAATCCAGGCCAAGATaGAATTTCTCACTCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: GFIVHETGLGQLLKQEQAKSRPR*NFSLSH Trigger: GTGGCTGAGTGAGAAATTCAATCTTGGCCTGGATTT...AGCCTGTTCCTGTTTAAGGAGCTGCCCCAGGCCTGTCTCATGTACAATAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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| CDS CCA 72 bp | CAGACTATCATGAGCTGTATGCGGGTGTCCATAACTTaGTTCTCCAAAGTATCCACACGGATCCTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QTIMSCMRVSIT*FSKVSTRILSS Trigger: GGAGGAGAGGATCCGTGTGGATACTTTGGAGAACCAAGTTATGGACACCCGCATACAGCTCATGATAGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004136.10 |
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