Pregenerated sensors for GSTM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058135Ensembl transcript IDs: ENSMUST00000004140.11, ENSMUST00000126593.3, ENSMUST00000153314.8
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGCTGTGTGGACTTGACTGGGAAGAGGGTGAGGAGATGGGGCTaGCCAAGCTGCAGAAGGGAGCGGGAAGGAGAGAGAACCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: EGCVDLTGKRVRRWG*PSCRREREGERTRS Trigger: GCTCCTGGTTCTCTCTCCTTCCCGCTCCCTTCTGCAGCTTGGTCAGCCCCATCTCCTCACCCTCTTCCCAGTCAAGTCCACACAGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004140.11 ENSMUST00000153314.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGACCTGGGGAGGCTACTCCACCAGGAACAGGCTGGCACTCAAGTATTGACCGTGAGGAGATGGGGCTaGCCAAGCTGCAGAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TDLGRLLHQEQAGTQVLTVRRWG*PSCRRE Trigger: CTCCCTTCTGCAGCTTGGTCAGCCCCATCTCCTCAC...GGTCAATACTTGAGTGCCAGCCTGTTCCTGGTGGAGTAGCCTCCCCAGGTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| 3UTR-3UTR GCA 90 bp | GACTTTATTGTAGACGAGACAGACCTGGGGAGGCTACTCCACCAGGAACAGGCTTGCAGAAGGCCAGGGTaGTGTCCCCACCCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: DFIVDETDLGRLLHQEQACRRPG*CPHPGP Trigger: AGGCCCTGGGTGGGGACAGCACCCTGGCCTTCTGCA...AGCCTGTTCCTGGTGGAGTAGCCTCCCCAGGTCTGTCTCGTCTACAATAAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| 3UTR-3UTR CCA 90 bp | TCGCAGAAACGGGCTGTGAGGTTGGGTCAGGGAGCCAATGAAGAAGGGGCCATGGCAGGATCCCCAGTGTaGACAGGTCCTCCTAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SQKRAVRLGQGANEEGAMAGSPV*TGPPSE Trigger: CTCACTAGGAGGACCTGTCCACACTGGGGATCCTGC...CATGGCCCCTTCTTCATTGGCTCCCTGACCCAACCTCACAGCCCGTTTCTGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004140.11 ENSMUST00000153314.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTCAGACTTTATTGTAGACGAGACAGACCTGGGGAGGCTACTCCACCAGGAATCCCCACCCAGGGCCTaGAGGATCCCCAGTGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: VSDFIVDETDLGRLLHQESPPRA*RIPSVD Trigger: GTCCACACTGGGGATCCTGCAGGCCCTGGGTGGGGA...TTCCTGGTGGAGTAGCCTCCCCAGGTCTGTCTCGTCTACAATAAAGTCTGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| 3UTR-3UTR TCA 90 bp | GACTTTATTGTAGACGAGACAGACCTGGGGAGGCTACTCCACCAGGAACAGGCTAGAAACTGGGGAGAATaGAGGCTGTGTGGACTTGAC | + |
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Preference number: 2 (lower is better) Translates to: DFIVDETDLGRLLHQEQARNWGE*RLCGLD Trigger: GTCAAGTCCACACAGCCTTCATTCTCCCCAGTTTCT...AGCCTGTTCCTGGTGGAGTAGCCTCCCCAGGTCTGTCTCGTCTACAATAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| 3UTR CCA 72 bp | TGCTGTCCCCACCCAGGGCCTGCAGGATCCCCAGTGTaGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: CCPHPGPAGSPV*TGPPSECPCSK Trigger: CTTGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCCCTGGGTGGGGACAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004140.11 ENSMUST00000153314.8 |
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| 3UTR-3UTR CAA 90 bp | TCGCAGAAACGGGCTGTGAGGTTGGGTCAGGGAGCCAATGAAGAAGGGGCCATGGAAGGCTGTGTGGACTaGACTGGGAAGAGGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: SQKRAVRLGQGANEEGAMEGCVD*TGKRVR Trigger: CCTCACCCTCTTCCCAGTCAAGTCCACACAGCCTTC...CATGGCCCCTTCTTCATTGGCTCCCTGACCCAACCTCACAGCCCGTTTCTGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004140.11 ENSMUST00000153314.8 |
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| 3UTR CCA 72 bp | GACAGACCTGGGGAGGCTACTCCACCAGGAACAGGCTaGCACTCAAGTATTGACCTTCGGGGTAACTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: DRPGEATPPGTG*HSSIDLRGNSR Trigger: CCTAGAGTTACCCCGAAGGTCAATACTTGAGTGCCAGCCTGTTCCTGGTGGAGTAGCCTCCCCAGGTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| 3UTR-3UTR CAA 90 bp | GTTTCAGACTTTATTGTAGACGAGACAGACCTGGGGAGGCTACTCCACCAGGAAGAAGGCTGTGTGGACTaGACTGGGAAGAGGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: VSDFIVDETDLGRLLHQEEGCVD*TGKRVR Trigger: CCTCACCCTCTTCCCAGTCAAGTCCACACAGCCTTC...TTCCTGGTGGAGTAGCCTCCCCAGGTCTGTCTCGTCTACAATAAAGTCTGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| 3UTR-3UTR CAA 90 bp | GTTTCAGACTTTATTGTAGACGAGACAGACCTGGGGAGGCTACTCCACCAGGAAAAACGGGCTGTGAGGTaGGGTCAGGGAGCCAATGAA | + |
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Preference number: 3 (lower is better) Translates to: VSDFIVDETDLGRLLHQEKRAVR*GQGANE Trigger: TTCATTGGCTCCCTGACCCAACCTCACAGCCCGTTT...TTCCTGGTGGAGTAGCCTCCCCAGGTCTGTCTCGTCTACAATAAAGTCTGAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| CDS-3UTR TCA 90 bp | GGGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCGGAAATCCACATAGGTaGCCTTGTCCCCTGCAAACC | + |
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Preference number: 4 (lower is better) Translates to: GPAGSPVWTGPPSECPCSGNPHR*PCPLQT Trigger: GGTTTGCAGGGGACAAGGTCACCTATGTGGATTTCC...GCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR GCA 90 bp | GGGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCTGTATTCCAGGAGCATaGGGATCGGGTGTGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: GPAGSPVWTGPPSECPCSCIPGA*GSGVSV Trigger: GACTGACACACCCGATCCGCATGCTCCTGGAATACA...GCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 |
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| CDS-3UTR CCA 90 bp | GGGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCCGGGTGTCCATGACCTaGTTCTCCACAATGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GPAGSPVWTGPPSECPCSRVSMT*FSTMSA Trigger: TGCAGACATTGTGGAGAACCAGGTCATGGACACCCG...GCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGGAAATCCACATAGGTaGCCTTGTCCCCTGCAAACC | + |
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Preference number: 4 (lower is better) Translates to: QGLQDPQCGQVLLVSARVGNPHR*PCPLQT Trigger: GGTTTGCAGGGGACAAGGTCACCTATGTGGATTTCC...TACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTACGGGTGTCCATGACCTaGTTCTCCACAATGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QGLQDPQCGQVLLVSARVRVSMT*FSTMSA Trigger: TGCAGACATTGTGGAGAACCAGGTCATGGACACCCG...TACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR CCA 90 bp | GGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCAGAGGCAGAGAACAGCTaGCTGTCACCACCTTTAGAC | + |
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Preference number: 4 (lower is better) Translates to: GLQDPQCGQVLLVSARVAEAENS*LSPPLD Trigger: GTCTAAAGGTGGTGACAGCCAGCTGTTCTCTGCCTC...TGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR TCA 90 bp | CCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCAAGGGAAATCCACATAGGTaGCCTTGTCCCCTGCAAACC | + |
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Preference number: 4 (lower is better) Translates to: PAGSPVWTGPPSECPCSKGNPHR*PCPLQT Trigger: GGTTTGCAGGGGACAAGGTCACCTATGTGGATTTCC...CTTGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR GCA 90 bp | CTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCAAGGTGTATTCCAGGAGCATaGGGATCGGGTGTGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LQDPQCGQVLLVSARVARCIPGA*GSGVSV Trigger: GACTGACACACCCGATCCGCATGCTCCTGGAATACA...CCTTGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 |
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| CDS-3UTR CCA 90 bp | GGGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCCAAAGGGTTTGGCAATaGAACAGCCACAAAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPAGSPVWTGPPSECPCSQRVWQ*NSHKVR Trigger: CCTGACTTTGTGGCTGTTCCATTGCCAAACCCTTTG...GCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126593.3 |
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| CDS-3UTR CCA 90 bp | CTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCAAGGGAGGCAGAGAACAGCTaGCTGTCACCACCTTTAGAC | + |
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Preference number: 4 (lower is better) Translates to: LQDPQCGQVLLVSARVAREAENS*LSPPLD Trigger: GTCTAAAGGTGGTGACAGCCAGCTGTTCTCTGCCTC...CCTTGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR CCA 90 bp | CTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCAAGGGGTCTTCAAGAACTCTaGCTTCTGCTTCTCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LQDPQCGQVLLVSARVARGLQEL*LLLLLR Trigger: CCTCAGGAGAAGCAGAAGCCAGAGTTCTTGAAGACC...CCTTGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR CCA 90 bp | GGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCACAAAGGGTTTGGCAATaGAACAGCCACCTTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GLQDPQCGQVLLVSARVAQRVWQ*NSHLSK Trigger: CTTGGAAAGGTGGCTGTTCCATTGCCAAACCCTTTG...TGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153314.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAAAGAACTCTGGCTTCTaGTTCTCAAAGTCAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: QGLQDPQCGQVLLVSARVKNSGF*FSKSGL Trigger: CAACCCTGACTTTGAGAAGCAGAAGCCAGAGTTCTT...TACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| CDS-3UTR CCA 90 bp | TCGCAGAAACGGGCTGTGAGGTTGGGTCAGGGAGCCAATGAAGAAGGGGCCATGGGTCTTCAAGAACTCTaGCTTCTGCTTCTCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SQKRAVRLGQGANEEGAMGLQEL*LLLLLR Trigger: CCTCAGGAGAAGCAGAAGCCAGAGTTCTTGAAGACC...CATGGCCCCTTCTTCATTGGCTCCCTGACCCAACCTCACAGCCCGTTTCTGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153314.8 |
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| CDS-3UTR CCA 90 bp | TTTATTGTAGACGAGACAGACCTGGGGAGGCTACTCCACCAGGAACAGGCTGGCCGGGTGTCCATGACCTaGTTCTCCACAATGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FIVDETDLGRLLHQEQAGRVSMT*FSTMSA Trigger: TGCAGACATTGTGGAGAACCAGGTCATGGACACCCG...GCCAGCCTGTTCCTGGTGGAGTAGCCTCCCCAGGTCTGTCTCGTCTACAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| CDS-3UTR CCA 90 bp | CTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCAAGGGGTCTTCAAGAACTCTaGCTTCTGCTTCTCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LQDPQCGQVLLVSARVARGLQEL*LLLLKV Trigger: GACTTTGAGAAGCAGAAGCCAGAGTTCTTGAAGACC...CCTTGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| CDS-3UTR CCA 90 bp | TTTATTGTAGACGAGACAGACCTGGGGAGGCTACTCCACCAGGAACAGGCTGGCTACTTGTTACTCCAGTaGGCCATCTTTGAAAATATA | + |
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Preference number: 4 (lower is better) Translates to: FIVDETDLGRLLHQEQAGYLLLQ*AIFENI Trigger: TATATTTTCAAAGATGGCCCACTGGAGTAACAAGTA...GCCAGCCTGTTCCTGGTGGAGTAGCCTCCCCAGGTCTGTCTCGTCTACAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004140.11 |
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| CDS-3UTR CAA 90 bp | CAGGGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAAAGGCGTCCAGGCACTaGGGCTCAAACATACGGTAC | + |
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Preference number: 5 (lower is better) Translates to: QGLQDPQCGQVLLVSARVKASRH*GSNIRY Trigger: GTACCGTATGTTTGAGCCCAAGTGCCTGGACGCCTT...TACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCAAGGAAGGCGTCCAGGCACTaGGGCTCAAACATACGGTAC | + |
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Preference number: 5 (lower is better) Translates to: LQDPQCGQVLLVSARVARKASRH*GSNIRY Trigger: GTACCGTATGTTTGAGCCCAAGTGCCTGGACGCCTT...CCTTGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS-3UTR CAA 90 bp | GGCCTGCAGGATCCCCAGTGTGGACAGGTCCTCCTAGTGAGTGCCCGTGTAGCATCCCCAGCAAAGGGTTaGGCAATGGAACAGCCACAA | + |
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Preference number: 5 (lower is better) Translates to: GLQDPQCGQVLLVSARVASPAKG*AMEQPQ Trigger: TTGTGGCTGTTCCATTGCCAAACCCTTTGCTGGGGA...TGCTACACGGGCACTCACTAGGAGGACCTGTCCACACTGGGGATCCTGCAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126593.3 |
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| CDS-3UTR CAA 90 bp | TCGCAGAAACGGGCTGTGAGGTTGGGTCAGGGAGCCAATGAAGAAGGGGCCATGAAGGCGTCCAGGCACTaGGGCTCAAACATACGGTAC | + |
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Preference number: 5 (lower is better) Translates to: SQKRAVRLGQGANEEGAMKASRH*GSNIRY Trigger: GTACCGTATGTTTGAGCCCAAGTGCCTGGACGCCTT...CATGGCCCCTTCTTCATTGGCTCCCTGACCCAACCTCACAGCCCGTTTCTGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004140.11 ENSMUST00000153314.8 |
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| CDS-3UTR CAA 90 bp | TCGCAGAAACGGGCTGTGAGGTTGGGTCAGGGAGCCAATGAAGAAGGGGCCATGTCCCCAGCAAAGGGTTaGGCAATGGAACAGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: SQKRAVRLGQGANEEGAMSPAKG*AMEQPP Trigger: AGGTGGCTGTTCCATTGCCAAACCCTTTGCTGGGGA...CATGGCCCCTTCTTCATTGGCTCCCTGACCCAACCTCACAGCCCGTTTCTGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153314.8 |
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| CDS CCA 72 bp | CAGAGCATGATGAGCTGCATGCGGGTGTCCATGACCTaGTTCTCCACAATGTCTGCACGGATCCTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QSMMSCMRVSMT*FSTMSARILSS Trigger: GGAGGAGAGGATCCGTGCAGACATTGTGGAGAACCAGGTCATGGACACCCGCATGCAGCTCATCATGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004140.11 ENSMUST00000126593.3 ENSMUST00000153314.8 |
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| CDS CAA 72 bp | TCACCACCTTTAGACTCAGGCTCCCCAGCAAAGGGTTaGGCAATGGAACAGCCACCTTTCCAAGAAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPPLDSGSPAKG*AMEQPPFQERA Trigger: GGCCCTTTCTTGGAAAGGTGGCTGTTCCATTGCCAAACCCTTTGCTGGGGAGCCTGAGTCTAAAGGTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153314.8 |
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