Pregenerated sensors for GSTK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029864Ensembl transcript IDs: ENSMUST00000031897.8, ENSMUST00000204088.3
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGACCCAAATAACATGTAGGTTTTACCATCCACATGGGCAACAGTaGTGGGTAGCCCAAAGGCCCCATATTTGCAGGCTGCATCCGTGT | + |
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Preference number: 1 (lower is better) Translates to: QTQITCRFYHPHGQQ*WVAQRPHICRLHPC Trigger: ACACGGATGCAGCCTGCAAATATGGGGCCTTTGGGCTACCCACCACTGTTGCCCATGTGGATGGTAAAACCTACATGTTATTTGGGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CCA 90 bp | AGCTTGTTCTTCACCTGTTGTGTGGAGATCTTCTCCAGAAAGTGTTaGGCTTGCGCTGTGGACATTCCAGCCTTCACTGCTGCTTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: SLFFTCCVEIFSRKC*ACAVDIPAFTAAFS Trigger: TGAGAAAGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAGGTGAAGAACAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CCA 90 bp | ACCCAAATAACATGTAGGTTTTACCATCCACATGGGCAACAGTGGTaGGTAGCCCAAAGGCCCCATATTTGCAGGCTGCATCCGTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: TQITCRFYHPHGQQW*VAQRPHICRLHPCS Trigger: AGAACACGGATGCAGCCTGCAAATATGGGGCCTTTGGGCTACCCACCACTGTTGCCCATGTGGATGGTAAAACCTACATGTTATTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR TCA 90 bp | GTAGCCCAAAGGCCCCATATTTGCAGGCTGCATCCGTGTTCTCAATaGGCTTGTTCTTCACCTGTTGTGTGGAGATCTTCTCCAGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: VAQRPHICRLHPCSQ*ACSSPVVWRSSPES Trigger: ACTTTCTGGAGAAGATCTCCACACAACAGGTGAAGAACAAGCTCATTGAGAACACGGATGCAGCCTGCAAATATGGGGCCTTTGGGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CCA 90 bp | CAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGATaGAGAAATCAAAGATTACTCTGTAAGGCAGTCTTAAAGTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: QLKVDSCSSSQGHIR*RNQRLLCKAVLKSG Trigger: GCCAGACTTTAAGACTGCCTTACAGAGTAATCTTTGATTTCTCCATCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGACCACATGGGCAACAGTaGTGGGTAGCCCAAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: RQAQLKVDSCSSSQGHIRPHGQQ*WVAQRP Trigger: GGGCCTTTGGGCTACCCACCACTGTTGCCCATGTGG...TCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CAA 90 bp | GAGCTTGTTCTTCACCTGTTGTGTGGAGATCTTCTCCAGAAAGTGTaGGGCTTGCGCTGTGGACATTCCAGCCTTCACTGCTGCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: ELVLHLLCGDLLQKV*GLRCGHSSLHCCFL Trigger: GAGAAAGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAGGTGAAGAACAAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CAA 90 bp | GTTCTTCACCTGTTGTGTGGAGATCTTCTCCAGAAAGTGTTGGGCTaGCGCTGTGGACATTCCAGCCTTCACTGCTGCTTTCTCAATCGT | + |
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Preference number: 2 (lower is better) Translates to: VLHLLCGDLLQKVLG*RCGHSSLHCCFLNR Trigger: ACGATTGAGAAAGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAGGTGAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CAA 90 bp | TTTGCAGGCTGCATCCGTGTTCTCAATGAGCTTGTTCTTCACCTGTaGTGTGGAGATCTTCTCCAGAAAGTGTTGGGCTTGCGCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FAGCIRVLNELVLHL*CGDLLQKVLGLRCG Trigger: TCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAGGTGAAGAACAAGCTCATTGAGAACACGGATGCAGCCTGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR-3UTR CCA 90 bp | GGCACAGAAGTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCACAGGGCCACATCAGATaGAGAAATCAAAGATTACTC | + |
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Preference number: 2 (lower is better) Translates to: GTEVKAGTAKGGLLLQLPQGHIR*RNQRLL Trigger: GAGTAATCTTTGATTTCTCCATCTGATGTGGCCCTG...TGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTACTTCTGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| 3UTR CAA 90 bp | CCAAAGGCCCCATATTTGCAGGCTGCATCCGTGTTCTCAATGAGCTaGTTCTTCACCTGTTGTGTGGAGATCTTCTCCAGAAAGTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: PKAPYLQAASVFSMS*FFTCCVEIFSRKCW Trigger: CCAACACTTTCTGGAGAAGATCTCCACACAACAGGTGAAGAACAAGCTCATTGAGAACACGGATGCAGCCTGCAAATATGGGGCCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR-3UTR CAA 90 bp | AGGTTTTACCATCCACATGGGCAACAGTGGTGGGTAGCCCAAAGGCCCCATATTGCTAAAGGTGGACTCTaGCTCCAGCTCCCAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: RFYHPHGQQWWVAQRPHIAKGGL*LQLPGP Trigger: TGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGC...AATATGGGGCCTTTGGGCTACCCACCACTGTTGCCCATGTGGATGGTAAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR GCA 72 bp | TGTTGTGTGGAGATCTTCTCCAGAAAGTGTTGGGCTTaGGCTGTGGACATTCCAGCCTTCACTGCTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: CCVEIFSRKCWA*AVDIPAFTAAF Trigger: GAAAGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CCA 72 bp | TGGAGATCTTCTCCAGAAAGTGTTGGGCTTGCGCTGTaGACATTCCAGCCTTCACTGCTGCTTTCTCAATCG | + |
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Preference number: 3 (lower is better) Translates to: WRSSPESVGLAL*TFQPSLLLSQS Trigger: CGATTGAGAAAGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CCA 72 bp | TTCACCTGTTGTGTGGAGATCTTCTCCAGAAAGTGTTaGGCTTGCGCTGTGGACATTCCAGCCTTCACTGCT | + |
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Preference number: 3 (lower is better) Translates to: FTCCVEIFSRKC*ACAVDIPAFTA Trigger: AGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CCA 72 bp | ACATGTAGGTTTTACCATCCACATGGGCAACAGTGGTaGGTAGCCCAAAGGCCCCATATTTGCAGGCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: TCRFYHPHGQQW*VAQRPHICRLH Trigger: ATGCAGCCTGCAAATATGGGGCCTTTGGGCTACCCACCACTGTTGCCCATGTGGATGGTAAAACCTACATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CCA 72 bp | ATAACATGTAGGTTTTACCATCCACATGGGCAACAGTaGTGGGTAGCCCAAAGGCCCCATATTTGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ITCRFYHPHGQQ*WVAQRPHICRL Trigger: CAGCCTGCAAATATGGGGCCTTTGGGCTACCCACCACTGTTGCCCATGTGGATGGTAAAACCTACATGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR TCA 72 bp | AGGCCCCATATTTGCAGGCTGCATCCGTGTTCTCAATaGGCTTGTTCTTCACCTGTTGTGTGGAGATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: RPHICRLHPCSQ*ACSSPVVWRSS Trigger: AGAAGATCTCCACACAACAGGTGAAGAACAAGCTCATTGAGAACACGGATGCAGCCTGCAAATATGGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| CDS-3UTR CCA 90 bp | AAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGCATGGGCAACAGTGGTaGGTAGCCCAAAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: KAGTAKGGLLLQLPGPHQHGQQW*VAQRPH Trigger: ATGGGGCCTTTGGGCTACCCACCACTGTTGCCCATG...CTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS-3UTR CCA 90 bp | GAAGTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACCACATGGGCAACAGTaGTGGGTAGCCCAAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: EVKAGTAKGGLLLQLPGPPHGQQ*WVAQRP Trigger: GGGCCTTTGGGCTACCCACCACTGTTGCCCATGTGG...TGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS-3UTR CCA 90 bp | GCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGATGGAGATCTGGCATTCGCAGTTaGGGGTACAGGGCCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: AQLKVDSCSSSQGHIRWRSGIRS*GYRAHP Trigger: TGGATGGGCCCTGTACCCCCAACTGCGAATGCCAGA...TCTCCATCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS-3UTR GCA 90 bp | AAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGAGAAAGTGTTGGGCTTaGGCTGTGGACATTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KAGTAKGGLLLQLPGPHQRKCWA*AVDIPA Trigger: GGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCT...CTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS-3UTR GCA 90 bp | GTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCATTCCAGCCTTCACTaGTGCAGCCAGAATGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VKAGTAKGGLLLQLPGPHHSSLH*CSQNAL Trigger: CAGAGCATTCTGGCTGCAGCAGTGAAGGCTGGAATG...ATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS-3UTR TCA 90 bp | AGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGAGCAGCCAGAATGCTCTaGTACTCCGTGATATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RQAQLKVDSCSSSQGHIRAARML*YSVISS Trigger: TGAAGATATCACGGAGTATCAGAGCATTCTGGCTGC...TCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS-3UTR GCA 90 bp | AAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGAAAGTGGGCCGCAACTaGAGCTTTATATTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: KAGTAKGGLLLQLPGPHQKVGRN*SFIFQR Trigger: CCTCTGGAATATAAAGCTGCAGTTGCGGCCCACTTT...CTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR GCA 90 bp | GAAGTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCAAAAGTGGGCCGCAACTaGAGCTTTATATTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: EVKAGTAKGGLLLQLPGPKVGRN*SFIFQR Trigger: CCTCTGGAATATAAAGCTGCAGTTGCGGCCCACTTT...TGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR GCA 90 bp | GGCACAGAAGTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCATCCAGCATCTCTGGTTaGTCCATGCTTACAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GTEVKAGTAKGGLLLQLPSSISG*SMLTVV Trigger: CACCACTGTAAGCATGGAGCAACCAGAGATGCTGGA...TGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTACTTCTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR CCA 90 bp | GTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATGCATCCATATCTCTCTaGACACCTTCTCCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: VKAGTAKGGLLLQLPGPHASISL*TPSPAS Trigger: AGATGCTGGAGAAGGTGTCCAGAGAGATATGGATGC...ATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR CCA 90 bp | GGCACAGAAGTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGTTTTACCATCCACATaGGCAACAGTGGTGGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GTEVKAGTAKGGLLLQLPVLPST*ATVVGS Trigger: GCTACCCACCACTGTTGCCCATGTGGATGGTAAAAC...TGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTACTTCTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| 3UTR CAA 72 bp | ACAGAAGTAAAGGCAGGCACAGCTAAAGGTGGACTCTaGCTCCAGCTCCCAGGGCCACATCAGATGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TEVKAGTAKGGL*LQLPGPHQMEK Trigger: TTTCTCCATCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTACTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR TCA 90 bp | GTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATGGAGAGGAATCTCTTTaGAGATGTACTGGCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: VKAGTAKGGLLLQLPGPHGEESL*RCTGLF Trigger: GAAAAGGCCAGTACATCTTCAAAGAGATTCCTCTCC...ATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR GCA 90 bp | TGTTGGGCTTGCGCTGTGGACATTCCAGCCTTCACTGCTGCTTTCTCAATCGTTTCCAGCATCTCTGGTTaGTCCATGCTTACAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: CWACAVDIPAFTAAFSIVSSISG*SMLTVV Trigger: CACCACTGTAAGCATGGAGCAACCAGAGATGCTGGA...AACGATTGAGAAAGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| CDS-3UTR CCA 90 bp | GTGTTGGGCTTGCGCTGTGGACATTCCAGCCTTCACTGCTGCTTTCTCAATCGTATGTTGAGGGGAACCTaGAAGAACTGCTTCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VLGLRCGHSSLHCCFLNRMLRGT*KNCFRR Trigger: TCTCCTGAAGCAGTTCTTCCAGGTTCCCCTCAACAT...ACGATTGAGAAAGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| 3UTR CAA 72 bp | CTGTTGTGTGGAGATCTTCTCCAGAAAGTGTTGGGCTaGCGCTGTGGACATTCCAGCCTTCACTGCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LLCGDLLQKVLG*RCGHSSLHCCF Trigger: AAAGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| CDS-3UTR TCA 90 bp | CTTAAAGTCTGGCATTCGCAGTTGGGGGTACAGGGCCCATCCACTTCTCTCCTAGGAGAGGAATCTCTTTaGAGATGTACTGGCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LKVWHSQLGVQGPSTSLLGEESL*RCTGLF Trigger: GAAAAGGCCAGTACATCTTCAAAGAGATTCCTCTCC...TAGGAGAGAAGTGGATGGGCCCTGTACCCCCAACTGCGAATGCCAGACTTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| CDS-3UTR GCA 90 bp | CTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGATGGAGAAATCAAAGAGGTGTTGGTATCTaGATAGGACCTCAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LKVDSCSSSQGHIRWRNQRGVGI*IGPQSP Trigger: TGGGCTTTGAGGTCCTATGCAGATACCAACACCTCT...TTGATTTCTCCATCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR CCA 90 bp | ACAGAAGTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGATATTCCAGAGGTGTTaGTATCTGCATAGGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: TEVKAGTAKGGLLLQLPGIFQRC*YLHRTS Trigger: TGAGGTCCTATGCAGATACCAACACCTCTGGAATAT...CCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTACTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR CCA 90 bp | CTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGATGGAGAAATCAAATGTTGAGGGGAACCTaGAAGAACTGCTTCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LKVDSCSSSQGHIRWRNQMLRGT*KNCFRR Trigger: TCTCCTGAAGCAGTTCTTCCAGGTTCCCCTCAACAT...TTGATTTCTCCATCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR CCA 90 bp | CTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGATGGAGAAATCAACTTCTCCAGCATCTCTaGTTGCTCCATGCTTACAGT | + |
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Preference number: 4 (lower is better) Translates to: LKVDSCSSSQGHIRWRNQLLQHL*LLHAYS Trigger: ACTGTAAGCATGGAGCAACCAGAGATGCTGGAGAAG...TTGATTTCTCCATCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR CCA 90 bp | AGGTTTTACCATCCACATGGGCAACAGTGGTGGGTAGCCCAAAGGCCCCATATTGCATCCATATCTCTCTaGACACCTTCTCCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: RFYHPHGQQWWVAQRPHIASISL*TPSPAS Trigger: AGATGCTGGAGAAGGTGTCCAGAGAGATATGGATGC...AATATGGGGCCTTTGGGCTACCCACCACTGTTGCCCATGTGGATGGTAAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| CDS-3UTR GCA 90 bp | CCAAGCGGTCAGACCCAAATAACATGTAGGTTTTACCATCCACATGGGCAACAGAGAGGTGTTGGTATCTaGATAGGACCTCAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PSGQTQITCRFYHPHGQQRGVGI*IGPQSP Trigger: TGGGCTTTGAGGTCCTATGCAGATACCAACACCTCT...CTGTTGCCCATGTGGATGGTAAAACCTACATGTTATTTGGGTCTGACCGCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| CDS-3UTR GCA 90 bp | CTTGCTCCAGCTCCCAGGGCCACATCAGATGGAGAAATCAAAGATTACTCTGTAGGAACCTGGAAGAACTaGTTCAGGAGAGGAATCTCT | + |
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Preference number: 4 (lower is better) Translates to: LAPAPRATSDGEIKDYSVGTWKN*FRRGIS Trigger: AGAGATTCCTCTCCTGAAGCAGTTCTTCCAGGTTCC...TACAGAGTAATCTTTGATTTCTCCATCTGATGTGGCCCTGGGAGCTGGAGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS-3UTR CCA 90 bp | AGATTACTCTGTAAGGCAGTCTTAAAGTCTGGCATTCGCAGTTGGGGGTACAGGATATTCCAGAGGTGTTaGTATCTGCATAGGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: RLLCKAVLKSGIRSWGYRIFQRC*YLHRTS Trigger: TGAGGTCCTATGCAGATACCAACACCTCTGGAATAT...CCTGTACCCCCAACTGCGAATGCCAGACTTTAAGACTGCCTTACAGAGTAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204088.3 |
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| CDS-3UTR CAA 90 bp | AAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGCCACATCAGGTCTGGCATTCGCAGTaGGGGGTACAGGGCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: KAGTAKGGLLLQLPGPHQVWHSQ*GVQGPS Trigger: GGATGGGCCCTGTACCCCCAACTGCGAATGCCAGAC...CTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS CCA 90 bp | AGCTTGTTCTTCACCTGTTGTGTGGAGATCTTCTCCAGAAAGTGTTaGGCTTGCGCTGTGGACATTCCAGCCTTCACTGCTGCAGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: SLFFTCCVEIFSRKC*ACAVDIPAFTAAAR Trigger: TCTGGCTGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAGGTGAAGAACAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS-3UTR CAA 90 bp | ACAGAAGTAAAGGCAGGCACAGCTAAAGGTGGACTCTTGCTCCAGCTCCCAGGGGTGTTCTCAATGAGCTaGTTCTTCACCTGTTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: TEVKAGTAKGGLLLQLPGVFSMS*FFTCCV Trigger: CACACAACAGGTGAAGAACAAGCTCATTGAGAACAC...CCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCCTGCCTTTACTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS CCA 90 bp | CCATACACGCATCCATATCTCTCTGGACACCTTCTCCAGCATCTCTaGTTGCTCCATGCTTACAGTGGTGAGGAAGCGCATGGCATTTAT | + |
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Preference number: 5 (lower is better) Translates to: PYTHPYLSGHLLQHL*LLHAYSGEEAHGIY Trigger: ATAAATGCCATGCGCTTCCTCACCACTGTAAGCATGGAGCAACCAGAGATGCTGGAGAAGGTGTCCAGAGAGATATGGATGCGTGTATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS GCA 90 bp | ACACGCATCCATATCTCTCTGGACACCTTCTCCAGCATCTCTGGTTaGTCCATGCTTACAGTGGTGAGGAAGCGCATGGCATTTATACTT | + |
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Preference number: 5 (lower is better) Translates to: TRIHISLDTFSSISG*SMLTVVRKRMAFIL Trigger: AAGTATAAATGCCATGCGCTTCCTCACCACTGTAAGCATGGAGCAACCAGAGATGCTGGAGAAGGTGTCCAGAGAGATATGGATGCGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS GCA 90 bp | TCACCAAAGAAATCCTTGGGTATGTTGAGGGGAACCTGGAAGAACTaGTTCAGGAGAGGAATCTCTTTGAAGATGTACTGGCCTTTTCGG | + |
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Preference number: 5 (lower is better) Translates to: SPKKSLGMLRGTWKN*FRRGISLKMYWPFR Trigger: CCGAAAAGGCCAGTACATCTTCAAAGAGATTCCTCTCCTGAAGCAGTTCTTCCAGGTTCCCCTCAACATACCCAAGGATTTCTTTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS GCA 72 bp | TGTTGTGTGGAGATCTTCTCCAGAAAGTGTTGGGCTTaGGCTGTGGACATTCCAGCCTTCACTGCTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CCVEIFSRKCWA*AVDIPAFTAAA Trigger: GGCTGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS CCA 72 bp | GTGGGCCGCAACTGCAGCTTTATATTCCAGAGGTGTTaGTATCTGCATAGGACCTCAAAGCCCAGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VGRNCSFIFQRC*YLHRTSKPSQE Trigger: CTCCTGGCTGGGCTTTGAGGTCCTATGCAGATACCAACACCTCTGGAATATAAAGCTGCAGTTGCGGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS CCA 72 bp | TGGAGATCTTCTCCAGAAAGTGTTGGGCTTGCGCTGTaGACATTCCAGCCTTCACTGCTGCAGCCAGAATGC | + |
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Preference number: 6 (lower is better) Translates to: WRSSPESVGLAL*TFQPSLLQPEC Trigger: GCATTCTGGCTGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS CAA 72 bp | CCATATCTCTCTGGACACCTTCTCCAGCATCTCTGGTaGCTCCATGCTTACAGTGGTGAGGAAGCGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: PYLSGHLLQHLW*LHAYSGEEAHG Trigger: GCCATGCGCTTCCTCACCACTGTAAGCATGGAGCAACCAGAGATGCTGGAGAAGGTGTCCAGAGAGATATGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS CAA 72 bp | CTGTTGTGTGGAGATCTTCTCCAGAAAGTGTTGGGCTaGCGCTGTGGACATTCCAGCCTTCACTGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLCGDLLQKVLG*RCGHSSLHCCS Trigger: GCTGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS CAA 90 bp | GAGCTTGTTCTTCACCTGTTGTGTGGAGATCTTCTCCAGAAAGTGTaGGGCTTGCGCTGTGGACATTCCAGCCTTCACTGCTGCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: ELVLHLLCGDLLQKV*GLRCGHSSLHCCSQ Trigger: CTGGCTGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAGGTGAAGAACAAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS GCA 72 bp | GCAACTGCAGCTTTATATTCCAGAGGTGTTGGTATCTaGATAGGACCTCAAAGCCCAGCCAGGAGTACGGGG | + |
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Preference number: 6 (lower is better) Translates to: ATAALYSRGVGI*IGPQSPARSTG Trigger: CCCCGTACTCCTGGCTGGGCTTTGAGGTCCTATGCAGATACCAACACCTCTGGAATATAAAGCTGCAGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS GCA 72 bp | CATATCTCTCTGGACACCTTCTCCAGCATCTCTGGTTaGTCCATGCTTACAGTGGTGAGGAAGCGCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: HISLDTFSSISG*SMLTVVRKRMA Trigger: TGCCATGCGCTTCCTCACCACTGTAAGCATGGAGCAACCAGAGATGCTGGAGAAGGTGTCCAGAGAGATATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS GCA 72 bp | TTGGGCTTGCGCTGTGGACATTCCAGCCTTCACTGCTaGAGCCAGAATGCTCTGATACTCCGTGATATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LGLRCGHSSLHC*SQNALILRDIF Trigger: GAAGATATCACGGAGTATCAGAGCATTCTGGCTGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS CAA 90 bp | GTTCTTCACCTGTTGTGTGGAGATCTTCTCCAGAAAGTGTTGGGCTaGCGCTGTGGACATTCCAGCCTTCACTGCTGCAGCCAGAATGCT | + |
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Preference number: 6 (lower is better) Translates to: VLHLLCGDLLQKVLG*RCGHSSLHCCSQNA Trigger: AGCATTCTGGCTGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGAGAAGATCTCCACACAACAGGTGAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS CCA 72 bp | CATCCATATCTCTCTGGACACCTTCTCCAGCATCTCTaGTTGCTCCATGCTTACAGTGGTGAGGAAGCGCAT | + |
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Preference number: 6 (lower is better) Translates to: HPYLSGHLLQHL*LLHAYSGEEAH Trigger: ATGCGCTTCCTCACCACTGTAAGCATGGAGCAACCAGAGATGCTGGAGAAGGTGTCCAGAGAGATATGGATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS CCA 72 bp | CTTCATCTCGAGACCATACACGCATCCATATCTCTCTaGACACCTTCTCCAGCATCTCTGGTTGCTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: LHLETIHASISL*TPSPASLVAPC Trigger: GCATGGAGCAACCAGAGATGCTGGAGAAGGTGTCCAGAGAGATATGGATGCGTGTATGGTCTCGAGATGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS CAA 90 bp | TACACGCATCCATATCTCTCTGGACACCTTCTCCAGCATCTCTGGTaGCTCCATGCTTACAGTGGTGAGGAAGCGCATGGCATTTATACT | + |
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Preference number: 6 (lower is better) Translates to: YTHPYLSGHLLQHLW*LHAYSGEEAHGIYT Trigger: AGTATAAATGCCATGCGCTTCCTCACCACTGTAAGCATGGAGCAACCAGAGATGCTGGAGAAGGTGTCCAGAGAGATATGGATGCGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS TCA 72 bp | GACATTCCAGCCTTCACTGCTGCAGCCAGAATGCTCTaGTACTCCGTGATATCTTCATCTCGAGACCATACA | + |
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Preference number: 6 (lower is better) Translates to: DIPAFTAAARML*YSVISSSRDHT Trigger: TGTATGGTCTCGAGATGAAGATATCACGGAGTATCAGAGCATTCTGGCTGCAGCAGTGAAGGCTGGAATGTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031897.8 |
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| CDS CCA 72 bp | TCACCAAAGAAATCCTTGGGTATGTTGAGGGGAACCTaGAAGAACTGCTTCAGGAGAGGAATCTCTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SPKKSLGMLRGT*KNCFRRGISLK Trigger: CTTCAAAGAGATTCCTCTCCTGAAGCAGTTCTTCCAGGTTCCCCTCAACATACCCAAGGATTTCTTTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS CAA 90 bp | ATACTTCCTTTCTTCACAGTCTCACCAAAGAAATCCTTGGGTATGTaGAGGGGAACCTGGAAGAACTGCTTCAGGAGAGGAATCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ILPFFTVSPKKSLGM*RGTWKNCFRRGISL Trigger: CAAAGAGATTCCTCTCCTGAAGCAGTTCTTCCAGGTTCCCCTCAACATACCCAAGGATTTCTTTGGTGAGACTGTGAAGAAAGGAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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| CDS CAA 72 bp | ATACTTCCTTTCTTCACAGTCTCACCAAAGAAATCCTaGGGTATGTTGAGGGGAACCTGGAAGAACTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ILPFFTVSPKKS*GMLRGTWKNCF Trigger: GAAGCAGTTCTTCCAGGTTCCCCTCAACATACCCAAGGATTTCTTTGGTGAGACTGTGAAGAAAGGAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031897.8 ENSMUST00000204088.3 |
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