Pregenerated sensors for GSTCD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028018Ensembl transcript IDs: ENSMUST00000029651.11, ENSMUST00000080583.6
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTaGCCACTGAGAACGACTCTGGCGGCTAAGGCTTCGGGGAATCCC | + |
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Preference number: 1 (lower is better) Translates to: TSSGKWEEMDLWRES*PLRTTLAAKASGNP Trigger: GGGATTCCCCGAAGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| 3UTR TCA 90 bp | AGCTGGCTGCTGGAAAGAAAACATAGGCAGCCAGCACTGTCCAAATaGGCTTTTCAGAGTCTGCACACTTCACACCCAAACAGAAGGCTA | + |
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Preference number: 1 (lower is better) Translates to: SWLLERKHRQPALSK*AFQSLHTSHPNRRL Trigger: TAGCCTTCTGTTTGGGTGTGAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTATGTTTTCTTTCCAGCAGCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| 3UTR-3UTR CCA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTTCCTCACGAAGCCAATaGCAGAGCATCACGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: MDLWRESWPLRTTLAAKASSRSQ*QSITFE Trigger: CTCAAACGTGATGCTCTGCCATTGGCTTCGTGAGGA...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| 3UTR-3UTR TCA 90 bp | ATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAGTCTGCACACTTCACACCACAGAAGGCTACACATaGTGGCATGATTATAGAATG | + |
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Preference number: 2 (lower is better) Translates to: IGSQHCPNELFRVCTLHTTEGYT*WHDYRM Trigger: CATTCTATAATCATGCCATCATGTGTAGCCTTCTGT...GGTGTGAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| 3UTR-3UTR CCA 90 bp | ACACGTAATTTAAAAAGCTGGCTGCTGGAAAGAAAACATAGGCAGCCAGCACTGACATCATCAGGGAAGTaGGAGGAAATGGATCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: TRNLKSWLLERKHRQPALTSSGK*EEMDLW Trigger: CCACAGATCCATTTCCTCCCACTTCCCTGATGATGT...CAGTGCTGGCTGCCTATGTTTTCTTTCCAGCAGCCAGCTTTTTAAATTACGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| 3UTR CAA 90 bp | GATCTCCCTTGGAGGGCAAAACAATGTACCTCATGTAATTCATTCTaGCATTTTCAGAGAAAGCAAGGCCAGGGTTTGGAGAACAATAGA | + |
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Preference number: 2 (lower is better) Translates to: DLPWRAKQCTSCNSF*HFQRKQGQGLENNR Trigger: TCTATTGTTCTCCAAACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACATTGTTTTGCCCTCCAAGGGAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| 3UTR CCA 72 bp | CTCAGTGCTGCTTCCAGGAGCACAGCAAAGGCTCCCTaGACGGCCCCGGGCTCTCCTCACGAAGCCAATGGC | + |
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Preference number: 3 (lower is better) Translates to: LSAASRSTAKAP*TAPGSPHEANG Trigger: GCCATTGGCTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAGCAGCACTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| 3UTR TCA 72 bp | GGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTaGGAACGACTCTGGCGGCTAAGGCTTCGGGGAATC | + |
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Preference number: 3 (lower is better) Translates to: GRKWICGGNLGH*ERLWRLRLRGI Trigger: GATTCCCCGAAGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| 3UTR CCA 72 bp | GGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTaGCCACTGAGAACGACTCTGGCGGCTAAGGCTTCG | + |
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Preference number: 3 (lower is better) Translates to: GKWEEMDLWRES*PLRTTLAAKAS Trigger: CGAAGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| 3UTR-3UTR CAA 90 bp | GGCTGCTGGAAAGAAAACATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGATCTGTGGAGGGAATCTaGGCCACTGAGAACGACTCT | + |
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Preference number: 3 (lower is better) Translates to: GCWKENIGSQHCPNELFRSVEGI*ATENDS Trigger: AGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGA...TCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTATGTTTTCTTTCCAGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| 3UTR CCA 72 bp | CAGCCGATAGTTGTCTGTACACGTAATTTAAAAAGCTaGCTGCTGGAAAGAAAACATAGGCAGCCAGCACTG | + |
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Preference number: 3 (lower is better) Translates to: QPIVVCTRNLKS*LLERKHRQPAL Trigger: CAGTGCTGGCTGCCTATGTTTTCTTTCCAGCAGCCAGCTTTTTAAATTACGTGTACAGACAACTATCGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| 3UTR CCA 72 bp | CCCAAGTCTTCTCTTTTAGATCTAGAAGATCTCCCTTaGAGGGCAAAACAATGTACCTCATGTAATTCATTC | + |
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Preference number: 3 (lower is better) Translates to: PKSSLLDLEDLP*RAKQCTSCNSF Trigger: GAATGAATTACATGAGGTACATTGTTTTGCCCTCCAAGGGAGATCTTCTAGATCTAAAAGAGAAGACTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS-3UTR TCA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGCAGCCAAAGGGATGGTaGGTTCACATAGCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LPGAQQRLPGRPRALLTKQPKGW*VHIAWS Trigger: GGACCAGGCTATGTGAACTCACCATCCCTTTGGCTG...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR TCA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGAGCTGGACAGCTGTCTaGTCGGCAAATCTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LPGAQQRLPGRPRALLTKSWTAV*SANLQR Trigger: CCTCTGCAGATTTGCCGATCAGACAGCTGTCCAGCT...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGGCCACTCCACAAGCGTaGAAGGCCACCCCAATGTTA | + |
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Preference number: 4 (lower is better) Translates to: LPGAQQRLPGRPRALLTKATPQA*KATPML Trigger: TAACATTGGGGTGGCCTTGCACGCTTGTGGAGTGGC...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR TCA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGTGGATGTGTTCTGAATaGACCCGTAACAGCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LPGAQQRLPGRPRALLTKWMCSE*TRNSRG Trigger: GCCCCTGCTGTTACGGGTTCATTCAGAACACATCCA...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGCCAGCAGCCTTCTGTTaGTTCAGCTTCTGTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LPGAQQRLPGRPRALLTKPAAFC*FSFCLR Trigger: CCGAAGACAGAAGCTGAAGCAACAGAAGGCTGCTGG...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGGAGGTCGGCGGCTTTTaGTTTCCTGATGTGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LPGAQQRLPGRPRALLTKEVGGF*FPDVRR Trigger: CCTTCTCACATCAGGAAAGCAAAAGCCGCCGACCTC...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CCA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGAAGGAAGCCCGTGTTTaGATGCAGTGCTCGATCACC | + |
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Preference number: 4 (lower is better) Translates to: LPGAQQRLPGRPRALLTKKEARV*MQCSIT Trigger: GGTGATCGAGCACTGCATCCAAACACGGGCTTCCTT...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CCA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGTCAGAGCTCGGTCAGTaGACATTTTACCTTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LPGAQQRLPGRPRALLTKSELGQ*TFYLPS Trigger: CGAAGGAAGGTAAAATGTCCACTGACCGAGCTCTGA...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTCCTTCTGCAAACACGTaGTCCAGAGGCGGGAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: MDLWRESWPLRTTLAAKAPSANT*SRGGRS Trigger: CGACCTCCCGCCTCTGGAGCACGTGTTTGCAGAAGG...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CCA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGAAAGTTACAGACGTGTaGAGAGGAAAGATGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LPGAQQRLPGRPRALLTKKVTDV*RGKMQP Trigger: AGGCTGCATCTTTCCTCTCCACACGTCTGTAACTTT...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CCA 90 bp | AGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACGAGTCTCCTCTCGGGTaGGAGCTGGACAGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: REVGGNGSVEGILATENDESPLG*ELDSCL Trigger: CAGACAGCTGTCCAGCTCCCACCCGAGAGGAGACTC...GTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | AGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACGTGTTCTCCTGCTGCTaGTGCTCGGTCCAGATCCAC | + |
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Preference number: 4 (lower is better) Translates to: REVGGNGSVEGILATENDVFSCC*CSVQIH Trigger: GTGGATCTGGACCGAGCAGCAGCAGCAGGAGAACAC...GTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CCA 90 bp | GAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTGGCAAACAGCAATTCTaGACAATCGGAGGGAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: EEMDLWRESWPLRTTLAAGKQQF*TIGGSA Trigger: GGCGCTCCCTCCGATTGTCCAGAATTGCTGTTTGCC...AGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR TCA 90 bp | GGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCAGCCAAAGGGATGGTaGGTTCACATAGCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GKWEEMDLWRESWPLRTTQPKGW*VHIAWS Trigger: GGACCAGGCTATGTGAACTCACCATCCCTTTGGCTG...AGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR TCA 90 bp | GGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTAGCTGGACAGCTGTCTaGTCGGCAAATCTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GKWEEMDLWRESWPLRTTSWTAV*SANLQR Trigger: CCTCTGCAGATTTGCCGATCAGACAGCTGTCCAGCT...AGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR TCA 90 bp | GAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTTGCACTGCTTCCCTATaGGTCTCCTCTCGGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: EVGGNGSVEGILATENDSCTASL*VSSRVG Trigger: TCCCACCCGAGAGGAGACTCATAGGGAAGCAGTGCA...AGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | GAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTGACAACAGCAAGGCCTaGCCTACAGAAAACGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: EEMDLWRESWPLRTTLAADNSKA*PTENVR Trigger: CCTGACGTTTTCTGTAGGGCAGGCCTTGCTGTTGTC...AGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTGACAACAGCAAGGCCTaGCCTACAGAAAACGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: MDLWRESWPLRTTLAAKADNSKA*PTENVR Trigger: CCTGACGTTTTCTGTAGGGCAGGCCTTGCTGTTGTC...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | GGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTACTTGCCTTGCTCTTTaGTTTCCCCTTCCCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GKWEEMDLWRESWPLRTTTCLAL*FPLPGG Trigger: CCCTCCGGGAAGGGGAAAGCAAAGAGCAAGGCAAGT...AGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | GGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTACCAGGCCCATGCACTaGTTCCCTATGAGTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GKWEEMDLWRESWPLRTTTRPMH*FPMSLL Trigger: GAGGAGACTCATAGGGAAGCAGTGCATGGGCCTGGT...AGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | ATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAGTCTGCACACTTCACACCGCCGTGTTCTCCTGCTaGTGCTGCTCGGTCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: IGSQHCPNELFRVCTLHTAVFSC*CCSVQI Trigger: GATCTGGACCGAGCAGCAGCAGCAGGAGAACACGGC...GGTGTGAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS-3UTR GCA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTGAAGTACAGTCCTTCTaGAAACACGTGCTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: MDLWRESWPLRTTLAAKAEVQSF*KHVLQR Trigger: CCTCTGGAGCACGTGTTTGCAGAAGGACTGTACTTC...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | AGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACCATGGCCCCCGCCACTaGAGAAATCCACAATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: REVGGNGSVEGILATENDHGPRH*RNPQFC Trigger: ACAGAATTGTGGATTTCTGCAGTGGCGGGGGCCATG...GTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | TATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCGCCGTGTTCTCCTGCTaGTGCTGCTCGGTCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: YSTDIIREVGGNGSVEGIAVFSC*CCSVQI Trigger: GATCTGGACCGAGCAGCAGCAGCAGGAGAACACGGC...GATTCCCTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR TCA 90 bp | GAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTCGGCTTTTGCTTTCCTaGTGTGAGAAGGCTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: EVGGNGSVEGILATENDSRLLLS*CEKAPC Trigger: ACAGGGAGCCTTCTCACATCAGGAAAGCAAAAGCCG...AGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | GGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTGATCACCATGTCTGTTaGCACTCCACAAGCGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: GKWEEMDLWRESWPLRTTDHHVC*HSTSVQ Trigger: TTGCACGCTTGTGGAGTGGCAACAGACATGGTGATC...AGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTCGTGTTTGGATGCAGTaGTCGATCACCATGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: MDLWRESWPLRTTLAAKARVWMQ*SITMSV Trigger: AACAGACATGGTGATCGAGCACTGCATCCAAACACG...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR GCA 90 bp | ATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAGTCTGCACACTTCACACCACCAGGCCCATGCACTaGTTCCCTATGAGTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: IGSQHCPNELFRVCTLHTTRPMH*FPMSLL Trigger: GAGGAGACTCATAGGGAAGCAGTGCATGGGCCTGGT...GGTGTGAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS-3UTR GCA 90 bp | TATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTCTCCTGCTGCTGCTaGTCGGTCCAGATCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: YSTDIIREVGGNGSVEGIFSCCC*SVQIHQ Trigger: CTGGTGGATCTGGACCGAGCAGCAGCAGCAGGAGAA...GATTCCCTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CCA 90 bp | AGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCAGTTCCAGACTCTTaGAGGGAGCAGCCAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: REVGGNGSVEGILATENDSVPDS*REQPSL Trigger: AAGACTTGGCTGCTCCCTCCAAGAGTCTGGAACTGA...GTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR TCA 90 bp | GAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTCAGCCTTCTGTTTGGTaGGAGTACTCCAGGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: EVGGNGSVEGILATENDSQPSVW*EYSRYR Trigger: TCTGTACCTGGAGTACTCTCACCAAACAGAAGGCTG...AGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR TCA 90 bp | AGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTTTGCTTTCCTGATGTaGGAAGGCTCCCTGTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: REVGGNGSVEGILATENDFAFLM*EGSLLL Trigger: TAGCAACAGGGAGCCTTCTCACATCAGGAAAGCAAA...GTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR TCA 90 bp | GTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGTGCACTGCTTCCCTATaGGTCTCCTCTCGGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VEYSTDIIREVGGNGSVECTASL*VSSRVG Trigger: TCCCACCCGAGAGGAGACTCATAGGGAAGCAGTGCA...CTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | GAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTATCGGAGGGAGCGCCTaGTTTGAAATAACCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: EEMDLWRESWPLRTTLAAIGGSA*FEITCI Trigger: AATACAGGTTATTTCAAAGCAGGCGCTCCCTCCGAT...AGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | GAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAGGTTGATCTACCACTaGAGGCAAACAGCAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEMDLWRESWPLRTTLAARLIYH*RQTAIL Trigger: CAGAATTGCTGTTTGCCTGCAGTGGTAGATCAACCT...AGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTGGAAAGAAAACATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAGGCAAACAGCAATTCTaGACAATCGGAGGGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCWKENIGSQHCPNELFRGKQQF*TIGGSA Trigger: GGCGCTCCCTCCGATTGTCCAGAATTGCTGTTTGCC...TCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTATGTTTTCTTTCCAGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR CCA 90 bp | GAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTTCAGTTCCAGACTCTTaGAGGGAGCAGCCAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVGGNGSVEGILATENDSSVPDS*REQPSL Trigger: AAGACTTGGCTGCTCCCTCCAAGAGTCTGGAACTGA...AGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CCA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTGGTGCGGAGAAAACATaGCTTCAATGCCTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MDLWRESWPLRTTLAAKAGAEKT*LQCLFP Trigger: TGGAAAAAGGCATTGAAGCCATGTTTTCTCCGCACC...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CCA 90 bp | ACACGTAATTTAAAAAGCTGGCTGCTGGAAAGAAAACATAGGCAGCCAGCACTGGAGTCTCCTCTCGGGTaGGAGCTGGACAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRNLKSWLLERKHRQPALESPLG*ELDSCL Trigger: CAGACAGCTGTCCAGCTCCCACCCGAGAGGAGACTC...CAGTGCTGGCTGCCTATGTTTTCTTTCCAGCAGCCAGCTTTTTAAATTACGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR TCA 90 bp | ATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAGTCTGCACACTTCACACCTTGCACTGTGAGCTTTaGGAACGCCACCTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IGSQHCPNELFRVCTLHTLHCEL*ERHLQF Trigger: GAACTGAAGGTGGCGTTCTCAAAGCTCACAGTGCAA...GGTGTGAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR TCA 90 bp | ATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAGTCTGCACACTTCACACCCATCTTCTTGCACTGTaGGCTTTGAGAACGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IGSQHCPNELFRVCTLHTHLLAL*ALRTPP Trigger: AGGTGGCGTTCTCAAAGCTCACAGTGCAAGAAGATG...GGTGTGAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR TCA 90 bp | TATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTGGATGTGTTCTGAATaGACCCGTAACAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSTDIIREVGGNGSVEGIWMCSE*TRNSRG Trigger: GCCCCTGCTGTTACGGGTTCATTCAGAACACATCCA...GATTCCCTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | GAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTTGTGGAGAGGAAAGATaGAGCCTTCTGTTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVGGNGSVEGILATENDSCGEER*SLLFGE Trigger: CTCACCAAACAGAAGGCTGCATCTTTCCTCTCCACA...AGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACCAAAAGCACGATGTCTaGCAAAGTGAAGTACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: REVGGNGSVEGILATENDQKHDV*QSEVQS Trigger: GGACTGTACTTCACTTTGGCAGACATCGTGCTTTTG...GTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | GTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGCCACTCCACAAGCGTaGAAGGCCACCCCAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VEYSTDIIREVGGNGSVEATPQA*KATPML Trigger: TAACATTGGGGTGGCCTTGCACGCTTGTGGAGTGGC...CTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CCA 90 bp | GGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTAAAGTTACAGACGTGTaGAGAGGAAAGATGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKWEEMDLWRESWPLRTTKVTDV*RGKMQP Trigger: AGGCTGCATCTTTCCTCTCCACACGTCTGTAACTTT...AGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACGGTGCGGAGAAAACATaGCTTCAATGCCTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: REVGGNGSVEGILATENDGAEKT*LQCLFP Trigger: TGGAAAAAGGCATTGAAGCCATGTTTTCTCCGCACC...GTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CCA 90 bp | TATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCGGGAGAGCAGCTCTCTaGCTCCATAGAGATCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSTDIIREVGGNGSVEGIGRAAL*LHRDHL Trigger: CAAGTGATCTCTATGGAGCCAGAGAGCTGCTCTCCC...GATTCCCTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACATTACCAAAAAGTGGTaGATACAGGGCAAAAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: REVGGNGSVEGILATENDITKKW*IQGKST Trigger: CGTGCTTTTGCCCTGTATTCACCACTTTTTGGTAAT...GTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR TCA 90 bp | GAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTTGGAAGCTGCTGTTTTaGCTTTTGGCACTTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVGGNGSVEGILATENDSWKLLF*LLALPE Trigger: TTCAGGAAGTGCCAAAAGTCAAAACAGCAGCTTCCA...AGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | CAATGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTCCTTCTGCAAACACGTaGTCCAGAGGCGGGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QCTSCNSFLHFQRKQGQGPSANT*SRGGRS Trigger: CGACCTCCCGCCTCTGGAGCACGTGTTTGCAGAAGG...ACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | TATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCGAAGTACAGTCCTTCTaGAAACACGTGCTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSTDIIREVGGNGSVEGIEVQSF*KHVLQR Trigger: CCTCTGGAGCACGTGTTTGCAGAAGGACTGTACTTC...GATTCCCTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTGGAAAGAAAACATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAAAGCCCGTGTTTGGATaGAGTGCTCGATCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GCWKENIGSQHCPNELFRKPVFG*SARSPC Trigger: ACATGGTGATCGAGCACTGCATCCAAACACGGGCTT...TCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTATGTTTTCTTTCCAGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR CCA 90 bp | AGGTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAAGGAAGCCCGTGTTTaGATGCAGTGCTCGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: RLNIPLTSSGKWEEMDLWKEARV*MQCSIT Trigger: GGTGATCGAGCACTGCATCCAAACACGGGCTTCCTT...CCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR TCA 90 bp | AGGTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGCATCTTCTTGCACTGTaGGCTTTGAGAACGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RLNIPLTSSGKWEEMDLWHLLAL*ALRTPP Trigger: AGGTGGCGTTCTCAAAGCTCACAGTGCAAGAAGATG...CCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | TATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTGTGGAGAGGAAAGATaGAGCCTTCTGTTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSTDIIREVGGNGSVEGICGEER*SLLFGE Trigger: CTCACCAAACAGAAGGCTGCATCTTTCCTCTCCACA...GATTCCCTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTAAAACATGGCTTCAATaGCTTTTTCCATCAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MDLWRESWPLRTTLAAKAKTWLQ*LFPSTW Trigger: CCAAGTTGATGGAAAAAGGCATTGAAGCCATGTTTT...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | GTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGAAGCCCGTGTTTGGATaGAGTGCTCGATCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VEYSTDIIREVGGNGSVEKPVFG*SARSPC Trigger: ACATGGTGATCGAGCACTGCATCCAAACACGGGCTT...CTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTCTCTTTTAGATCTAGAAGATCTCCCTTGGAGGGCAAAACAATGTACCTTCTCCTGCTGCTGCTaGTCGGTCCAGATCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLDLEDLPWRAKQCTFSCCC*SVQIHQ Trigger: CTGGTGGATCTGGACCGAGCAGCAGCAGCAGGAGAA...GGTACATTGTTTTGCCCTCCAAGGGAGATCTTCTAGATCTAAAAGAGAAGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | ATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTTTGGAGAACAATAGACGTGTTCTCCTGCTGCTaGTGCTCGGTCCAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IHSCIFRESKARVWRTIDVFSCC*CSVQIH Trigger: GTGGATCTGGACCGAGCAGCAGCAGCAGGAGAACAC...GTCTATTGTTCTCCAAACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | ATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTTTGGAGAACAATAGACACTTGCCTTGCTCTTTaGTTTCCCCTTCCCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHSCIFRESKARVWRTIDTCLAL*FPLPGG Trigger: CCCTCCGGGAAGGGGAAAGCAAAGAGCAAGGCAAGT...GTCTATTGTTCTCCAAACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR CCA 90 bp | AGGTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGTCAGAGCTCGGTCAGTaGACATTTTACCTTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLNIPLTSSGKWEEMDLWSELGQ*TFYLPS Trigger: CGAAGGAAGGTAAAATGTCCACTGACCGAGCTCTGA...CCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR TCA 90 bp | CAATGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTCGGCTTTTGCTTTCCTaGTGTGAGAAGGCTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCTSCNSFLHFQRKQGQGRLLLS*CEKAPC Trigger: ACAGGGAGCCTTCTCACATCAGGAAAGCAAAAGCCG...ACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR TCA 90 bp | GAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTCTGTTCCAGCTTCTCTaGAAATTTCTTGCAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: EVGGNGSVEGILATENDSLFQLL*KFLADN Trigger: ATTATCTGCAAGAAATTTTCAGAGAAGCTGGAACAG...AGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTCTCTTTTAGATCTAGAAGATCTCCCTTGGAGGGCAAAACAATGTACCCCAGCAGCCTTCTGTTaGTTCAGCTTCTGTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLDLEDLPWRAKQCTPAAFC*FSFCLR Trigger: CCGAAGACAGAAGCTGAAGCAACAGAAGGCTGCTGG...GGTACATTGTTTTGCCCTCCAAGGGAGATCTTCTAGATCTAAAAGAGAAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTCTCTTTTAGATCTAGAAGATCTCCCTTGGAGGGCAAAACAATGTACCGAGGTCGGCGGCTTTTaGTTTCCTGATGTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLDLEDLPWRAKQCTEVGGF*FPDVRR Trigger: CCTTCTCACATCAGGAAAGCAAAAGCCGCCGACCTC...GGTACATTGTTTTGCCCTCCAAGGGAGATCTTCTAGATCTAAAAGAGAAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | TATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCACAAGGTTGTTTAACTaGTGCTGTTTCCTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSTDIIREVGGNGSVEGITRLFN*CCFLRA Trigger: AGCTCTGAGGAAACAGCAGCAGTTAAACAACCTTGT...GATTCCCTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CCA 90 bp | TGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTTTGGGGAGAGCAGCTCTCTaGCTCCATAGAGATCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTSCNSFLHFQRKQGQGLGRAAL*LHRDHL Trigger: CAAGTGATCTCTATGGAGCCAGAGAGCTGCTCTCCC...CAAACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR TCA 90 bp | CAATGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTCAGCCTTCTGTTTGGTaGGAGTACTCCAGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCTSCNSFLHFQRKQGQGQPSVW*EYSRYR Trigger: TCTGTACCTGGAGTACTCTCACCAAACAGAAGGCTG...ACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | CAATGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTGATCACCATGTCTGTTaGCACTCCACAAGCGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QCTSCNSFLHFQRKQGQGDHHVC*HSTSVQ Trigger: TTGCACGCTTGTGGAGTGGCAACAGACATGGTGATC...ACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR TCA 90 bp | CAATGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTTTTGCTTTCCTGATGTaGGAAGGCTCCCTGTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QCTSCNSFLHFQRKQGQGFAFLM*EGSLLL Trigger: TAGCAACAGGGAGCCTTCTCACATCAGGAAAGCAAA...ACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | AGGTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAATAAAGGGTCACTTTaGTCATCTACAGCTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: RLNIPLTSSGKWEEMDLWNKGSL*SSTAAT Trigger: AGTAGCAGCTGTAGATGAGCAAAGTGACCCTTTATT...CCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR GCA 90 bp | CAATGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTCGTGTTTGGATGCAGTaGTCGATCACCATGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QCTSCNSFLHFQRKQGQGRVWMQ*SITMSV Trigger: AACAGACATGGTGATCGAGCACTGCATCCAAACACG...ACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | ATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTTTGGAGAACAATAGACATCGGAGGGAGCGCCTaGTTTGAAATAACCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: IHSCIFRESKARVWRTIDIGGSA*FEITCI Trigger: AATACAGGTTATTTCAAAGCAGGCGCTCCCTCCGAT...GTCTATTGTTCTCCAAACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | ATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTTTGGAGAACAATAGACCAAAAGCACGATGTCTaGCAAAGTGAAGTACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IHSCIFRESKARVWRTIDQKHDV*QSEVQS Trigger: GGACTGTACTTCACTTTGGCAGACATCGTGCTTTTG...GTCTATTGTTCTCCAAACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR GCA 90 bp | AGGTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAAAACATGGCTTCAATaGCTTTTTCCATCAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLNIPLTSSGKWEEMDLWKTWLQ*LFPSTW Trigger: CCAAGTTGATGGAAAAAGGCATTGAAGCCATGTTTT...CCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CCA 90 bp | TGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTTTGTGCTCAGAGGACTCTTaGAGAAAATTCTCAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTSCNSFLHFQRKQGQGLCSEDS*RKFSTA Trigger: GGCTGTTGAGAATTTTCTCCAAGAGTCCTCTGAGCA...CAAACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS-3UTR TCA 90 bp | AAGTCTTCTCTTTTAGATCTAGAAGATCTCCCTTGGAGGGCAAAACAATGTACCATTACCAAAAAGTGGTaGATACAGGGCAAAAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLDLEDLPWRAKQCTITKKW*IQGKST Trigger: CGTGCTTTTGCCCTGTATTCACCACTTTTTGGTAAT...GGTACATTGTTTTGCCCTCCAAGGGAGATCTTCTAGATCTAAAAGAGAAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS-3UTR TCA 90 bp | ACACGTAATTTAAAAAGCTGGCTGCTGGAAAGAAAACATAGGCAGCCAGCACTGCTGTTCCAGCTTCTCTaGAAATTTCTTGCAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRNLKSWLLERKHRQPALLFQLL*KFLADN Trigger: ATTATCTGCAAGAAATTTTCAGAGAAGCTGGAACAG...CAGTGCTGGCTGCCTATGTTTTCTTTCCAGCAGCCAGCTTTTTAAATTACGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS-3UTR GCA 90 bp | CAATGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTACAAGGTTGTTTAACTaGTGCTGTTTCCTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QCTSCNSFLHFQRKQGQGTRLFN*CCFLRA Trigger: AGCTCTGAGGAAACAGCAGCAGTTAAACAACCTTGT...ACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS TCA 90 bp | ACGTGCTCCAGAGGCGGGAGGTCGGCGGCTTTTGCTTTCCTGATGTaGGAAGGCTCCCTGTTGCTAGCAGCTGCATCTTCTTGCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TCSRGGRSAAFAFLM*EGSLLLAAASSCTV Trigger: CACAGTGCAAGAAGATGCAGCTGCTAGCAACAGGGAGCCTTCTCACATCAGGAAAGCAAAAGCCGCCGACCTCCCGCCTCTGGAGCACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | TGGCTCCATAGAGATCACTTGAACAGAGTAGCCGTGTTCTCCTGCTaGTGCTGCTCGGTCCAGATCCACCAGGCCCATGCACTGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WLHRDHLNRVAVFSC*CCSVQIHQAHALLP Trigger: GGGAAGCAGTGCATGGGCCTGGTGGATCTGGACCGAGCAGCAGCAGCAGGAGAACACGGCTACTCTGTTCAAGTGATCTCTATGGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CAA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGCCAAAATTTCCTTTCTaGAGGGCTCAGCTTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGAQQRLPGRPRALLTKPKFPF*RAQLHR Trigger: CCTATGAAGCTGAGCCCTCAAGAAAGGAAATTTTGG...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 90 bp | GTTTCCTCAGAGCTCGGTCAGTGGACATTTTACCTTCCTTCGGGCTaGCGGCAGCAGGAAGACTGCTCCAGTCAAGGGTCCAAGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSSELGQWTFYLPSG*RQQEDCSSQGSKQD Trigger: GTCCTGCTTGGACCCTTGACTGGAGCAGTCTTCCTGCTGCCGTCAGCCCGAAGGAAGGTAAAATGTCCACTGACCGAGCTCTGAGGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | CTCTGGCTCCATAGAGATCACTTGAACAGAGTAGCCGTGTTCTCCTaGTGCTGCTGCTCGGTCCAGATCCACCAGGCCCATGCACTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWLHRDHLNRVAVFS*CCCSVQIHQAHALL Trigger: AAGCAGTGCATGGGCCTGGTGGATCTGGACCGAGCAGCAGCAGCAGGAGAACACGGCTACTCTGTTCAAGTGATCTCTATGGAGCCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGGAGCACAGCAAAGGCTCCCTGGACGGCCCCGGGCTCTCCTCACGAAGTTCTGTCTTCGGAGTTaGTCATCATTGTGTACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPGAQQRLPGRPRALLTKFCLRS*SSLCTL Trigger: CAGAGTACACAATGATGACAAACTCCGAAGACAGAA...CTTCGTGAGGAGAGCCCGGGGCCGTCCAGGGAGCCTTTGCTGTGCTCCTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CAA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTCGATCACCATGTCTGTaGCCACTCCACAAGCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MDLWRESWPLRTTLAAKARSPCL*PLHKRA Trigger: TGCACGCTTGTGGAGTGGCAACAGACATGGTGATCG...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | GCTTTCCCCTTCCCGGAGGGAGGCTCACTGCCAGCAGCCTTCTGTTaGTTCAGCTTCTGTCTTCGGAGTTTGTCATCATTGTGTACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AFPFPEGGSLPAAFC*FSFCLRSLSSLCTL Trigger: CAGAGTACACAATGATGACAAACTCCGAAGACAGAAGCTGAAGCAACAGAAGGCTGCTGGCAGTGAGCCTCCCTCCGGGAAGGGGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | ACAGGGCAAAAGCACGATGTCTGCCAAAGTGAAGTACAGTCCTTCTaGAAACACGTGCTCCAGAGGCGGGAGGTCGGCGGCTTTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TGQKHDVCQSEVQSF*KHVLQRREVGGFCF Trigger: AAAGCAAAAGCCGCCGACCTCCCGCCTCTGGAGCACGTGTTTGCAGAAGGACTGTACTTCACTTTGGCAGACATCGTGCTTTTGCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACGAAGGAAGCCCGTGTTaGGATGCAGTGCTCGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: REVGGNGSVEGILATENDEGSPC*DAVLDH Trigger: GTGATCGAGCACTGCATCCAAACACGGGCTTCCTTC...GTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCATTTCCTCCCACTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | ACCACTGCAGGCAAACAGCAATTCTGGACAATCGGAGGGAGCGCCTaGTTTGAAATAACCTGTATTTCCAGGTCCTGGGGCAGTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TTAGKQQFWTIGGSA*FEITCISRSWGSAS Trigger: AGAGGCACTGCCCCAGGACCTGGAAATACAGGTTATTTCAAAGCAGGCGCTCCCTCCGATTGTCCAGAATTGCTGTTTGCCTGCAGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | AACAGCAAGGCCTGCCCTACAGAAAACGTCAGGTTGATCTACCACTaGAGGCAAACAGCAATTCTGGACAATCGGAGGGAGCGCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NSKACPTENVRLIYH*RQTAILDNRRERLL Trigger: AAGCAGGCGCTCCCTCCGATTGTCCAGAATTGCTGTTTGCCTGCAGTGGTAGATCAACCTGACGTTTTCTGTAGGGCAGGCCTTGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | GAAGGAAGCCCGTGTTTGGATGCAGTGCTCGATCACCATGTCTGTTaGCACTCCACAAGCGTGCAAGGCCACCCCAATGTTAAACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGSPCLDAVLDHHVC*HSTSVQGHPNVKHS Trigger: GGAATGTTTAACATTGGGGTGGCCTTGCACGCTTGTGGAGTGGCAACAGACATGGTGATCGAGCACTGCATCCAAACACGGGCTTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CAA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTTTCTGTGCACTTGCCTaGCTCTTTGCTTTCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MDLWRESWPLRTTLAAKAFCALA*LFAFPF Trigger: GAAGGGGAAAGCAAAGAGCAAGGCAAGTGCACAGAA...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CAA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTGTGTCTTCTGTGCACTaGCCTTGCTCTTTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MDLWRESWPLRTTLAAKAVSSVH*PCSLLS Trigger: GGAAAGCAAAGAGCAAGGCAAGTGCACAGAAGACAC...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 90 bp | TGTCTCAGGACAACAGCAAGGCCTGCCCTACAGAAAACGTCAGGTTaGTCTACCACTGCAGGCAAACAGCAATTCTGGACAATCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CLRTTARPALQKTSG*STTAGKQQFWTIGG Trigger: CCCTCCGATTGTCCAGAATTGCTGTTTGCCTGCAGTGGTAGATCAACCTGACGTTTTCTGTAGGGCAGGCCTTGCTGTTGTCCTGAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | GCAGCAGGAAGACTGCTCCAGTCAAGGGTCCAAGCAGGACAAGGGTaGGGAGAAAACATGGCTTCAATGCCTTTTTCCATCAACTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AAGRLLQSRVQAGQG*GENMASMPFSINLV Trigger: GACCAAGTTGATGGAAAAAGGCATTGAAGCCATGTTTTCTCCGCACCCTTGTCCTGCTTGGACCCTTGACTGGAGCAGTCTTCCTGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CCA 90 bp | CATGGCCCCCGCCACTGCAGAAATCCACAATTCTGTCCCCAGGTTTaGCTTGATTCAGCACCAGGTAGACAAGGTTGTTTAACTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HGPRHCRNPQFCPQV*LDSAPGRQGCLTAA Trigger: AGCAGCAGTTAAACAACCTTGTCTACCTGGTGCTGAATCAAGCCAAACCTGGGGACAGAATTGTGGATTTCTGCAGTGGCGGGGGCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CAA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTTCACAGGCTGTTTCCTaGCAGAGTTCAGCAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MDLWRESWPLRTTLAAKASQAVS*QSSAIL Trigger: CAGAATTGCTGAACTCTGCAAGGAAACAGCCTGTGA...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 90 bp | CCAAAAAGTGGTGAATACAGGGCAAAAGCACGATGTCTGCCAAAGTaGAGTACAGTCCTTCTGCAAACACGTGCTCCAGAGGCGGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PKSGEYRAKARCLPK*STVLLQTRAPEAGG Trigger: ACCTCCCGCCTCTGGAGCACGTGTTTGCAGAAGGACTGTACTTCACTTTGGCAGACATCGTGCTTTTGCCCTGTATTCACCACTTTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 90 bp | TGCTTCCCTATGAGTCTCCTCTCGGGTGGGAGCTGGACAGCTGTCTaGTCGGCAAATCTGCAGAGGAGCATGTGTTCCTTGTATGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: CFPMSLLSGGSWTAV*SANLQRSMCSLYDK Trigger: TTTATCATACAAGGAACACATGCTCCTCTGCAGATTTGCCGATCAGACAGCTGTCCAGCTCCCACCCGAGAGGAGACTCATAGGGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CAA 90 bp | ATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAGTCTGCACACTTCACACCTTCAGTTCCAGACTCTaGGAGGGAGCAGCCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IGSQHCPNELFRVCTLHTFSSRL*EGAAKS Trigger: AGACTTGGCTGCTCCCTCCAAGAGTCTGGAACTGAA...GGTGTGAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS-3UTR CAA 90 bp | ATGGATCTGTGGAGGGAATCTTGGCCACTGAGAACGACTCTGGCGGCTAAGGCTTTCTGTCTTCGGAGTTaGTCATCATTGTGTACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MDLWRESWPLRTTLAAKAFCLRS*SSLCTL Trigger: CAGAGTACACAATGATGACAAACTCCGAAGACAGAA...AGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACAGATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CAA 90 bp | ATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAGTCTGCACACTTCACACCTTCTGTGCACTTGCCTaGCTCTTTGCTTTCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IGSQHCPNELFRVCTLHTFCALA*LFAFPF Trigger: GAAGGGGAAAGCAAAGAGCAAGGCAAGTGCACAGAA...GGTGTGAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS-3UTR CAA 90 bp | TATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGGAATCTTCAGTTCCAGACTCTaGGAGGGAGCAGCCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YSTDIIREVGGNGSVEGIFSSRL*EGAAKS Trigger: AGACTTGGCTGCTCCCTCCAAGAGTCTGGAACTGAA...GATTCCCTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CAA 90 bp | GTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGGAAGGAAGCCCGTGTTaGGATGCAGTGCTCGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VEYSTDIIREVGGNGSVEEGSPC*DAVLDH Trigger: GTGATCGAGCACTGCATCCAAACACGGGCTTCCTTC...CTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | AGCTTCCTCTCGAGCTCTAGGATTTCTTCAGGGATAGTTGGGGGATaGTCAGAGGACTCTTGGAGAAAATTCTCAACAGCCAAAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SFLSSSRISSGIVGG*SEDSWRKFSTAKGM Trigger: CATCCCTTTGGCTGTTGAGAATTTTCTCCAAGAGTCCTCTGAGCATCCCCCAACTATCCCTGAAGAAATCCTAGAGCTCGAGAGGAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 90 bp | TGGATGCAGTGCTCGATCACCATGTCTGTTGCCACTCCACAAGCGTaGAAGGCCACCCCAATGTTAAACATTCCTGTGAAATACTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: WMQCSITMSVATPQA*KATPMLNIPVKYSI Trigger: TATGGAGTATTTCACAGGAATGTTTAACATTGGGGTGGCCTTGCACGCTTGTGGAGTGGCAACAGACATGGTGATCGAGCACTGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CCA 90 bp | ATCGGAGGGAGCGCCTGCTTTGAAATAACCTGTATTTCCAGGTCCTaGGGCAGTGCCTCTTTTAGGAACGAAGTGTCTGAAGTATCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IGGSACFEITCISRS*GSASFRNEVSEVSV Trigger: TACAGATACTTCAGACACTTCGTTCCTAAAAGAGGCACTGCCCCAGGACCTGGAAATACAGGTTATTTCAAAGCAGGCGCTCCCTCCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS-3UTR CAA 90 bp | ACACGTAATTTAAAAAGCTGGCTGCTGGAAAGAAAACATAGGCAGCCAGCACTGCGATCACCATGTCTGTaGCCACTCCACAAGCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRNLKSWLLERKHRQPALRSPCL*PLHKRA Trigger: TGCACGCTTGTGGAGTGGCAACAGACATGGTGATCG...CAGTGCTGGCTGCCTATGTTTTCTTTCCAGCAGCCAGCTTTTTAAATTACGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS-3UTR CAA 90 bp | ATAGGCAGCCAGCACTGTCCAAATGAGCTTTTCAGAGTCTGCACACTTCACACCCCAAAATTTCCTTTCTaGAGGGCTCAGCTTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: IGSQHCPNELFRVCTLHTPKFPF*RAQLHR Trigger: CCTATGAAGCTGAGCCCTCAAGAAAGGAAATTTTGG...GGTGTGAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR CAA 90 bp | CAATGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTCACTTGCCTTGCTCTTaGCTTTCCCCTTCCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QCTSCNSFLHFQRKQGQGHLPCS*LSPSRR Trigger: CCTCCGGGAAGGGGAAAGCAAAGAGCAAGGCAAGTG...ACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS-3UTR CAA 90 bp | AGGTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGGTGTCTTCTGTGCACTaGCCTTGCTCTTTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLNIPLTSSGKWEEMDLWVSSVH*PCSLLS Trigger: GGAAAGCAAAGAGCAAGGCAAGTGCACAGAAGACAC...CCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS CCA 90 bp | TCTAGGATTTCTTCAGGGATAGTTGGGGGATGCTCAGAGGACTCTTaGAGAAAATTCTCAACAGCCAAAGGGATGGTGAGTTCACATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRISSGIVGGCSEDS*RKFSTAKGMVSSHS Trigger: GCTATGTGAACTCACCATCCCTTTGGCTGTTGAGAATTTTCTCCAAGAGTCCTCTGAGCATCCCCCAACTATCCCTGAAGAAATCCTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS TCA 90 bp | AAAGTTACAGACGTGTGGAGAGGAAAGATGCAGCCTTCTGTTTGGTaGGAGTACTCCAGGTACAGAGATTCCTCCGTAGGACTTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KVTDVWRGKMQPSVW*EYSRYRDSSVGLFL Trigger: TAAGAAAAGTCCTACGGAGGAATCTCTGTACCTGGAGTACTCTCACCAAACAGAAGGCTGCATCTTTCCTCTCCACACGTCTGTAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS GCA 90 bp | GATAATTACCAAAAAGTGGTGAATACAGGGCAAAAGCACGATGTCTaGCAAAGTGAAGTACAGTCCTTCTGCAAACACGTGCTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DNYQKVVNTGQKHDV*QSEVQSFCKHVLQR Trigger: CCTCTGGAGCACGTGTTTGCAGAAGGACTGTACTTCACTTTGGCAGACATCGTGCTTTTGCCCTGTATTCACCACTTTTTGGTAATTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CAA 90 bp | TGTACCTCATGTAATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTTTGTCACAGGCTGTTTCCTaGCAGAGTTCAGCAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTSCNSFLHFQRKQGQGLSQAVS*QSSAIL Trigger: CAGAATTGCTGAACTCTGCAAGGAAACAGCCTGTGA...CAAACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAATTACATGAGGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
||
| CDS GCA 90 bp | AGTATGATAGTAAAAACAAAGTTACAGACGTGTGGAGAGGAAAGATaGAGCCTTCTGTTTGGTGAGAGTACTCCAGGTACAGAGATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SMIVKTKLQTCGEER*SLLFGESTPGTEIP Trigger: AGGAATCTCTGTACCTGGAGTACTCTCACCAAACAGAAGGCTGCATCTTTCCTCTCCACACGTCTGTAACTTTGTTTTTACTATCATACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CAA 90 bp | GTTGAATATTCCACTGACATCATCAGGGAAGTGGGAGGAAATGGATCTGTGGAGAGGAGCATGTGTTCCTaGTATGATAAAGTTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VEYSTDIIREVGGNGSVERSMCS*YDKVFL Trigger: CAAGAAAACTTTATCATACAAGGAACACATGCTCCT...CTCCACAGATCCATTTCCTCCCACTTCCCTGATGATGTCAGTGGAATATTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
||
| CDS-3UTR CAA 90 bp | ATTCATTCTTGCATTTTCAGAGAAAGCAAGGCCAGGGTTTGGAGAACAATAGACAGGAGCATGTGTTCCTaGTATGATAAAGTTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IHSCIFRESKARVWRTIDRSMCS*YDKVFL Trigger: CAAGAAAACTTTATCATACAAGGAACACATGCTCCT...GTCTATTGTTCTCCAAACCCTGGCCTTGCTTTCTCTGAAAATGCAAGAATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029651.11 |
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| CDS TCA 90 bp | GCCACCCCAATGTTAAACATTCCTGTGAAATACTCCATATTTGCTTaGATGAACCAAATATTGCTTAAACCAAGTTCGTCACTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ATPMLNIPVKYSIFA*MNQILLKPSSSLLF Trigger: GAAGAGAAGTGACGAACTTGGTTTAAGCAATATTTGGTTCATTCAAGCAAATATGGAGTATTTCACAGGAATGTTTAACATTGGGGTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | GCTGCTGCTCGGTCCAGATCCACCAGGCCCATGCACTaGTTCCCTATGAGTCTCCTCTCGGGTGGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AAARSRSTRPMH*FPMSLLSGGSW Trigger: CCAGCTCCCACCCGAGAGGAGACTCATAGGGAAGCAGTGCATGGGCCTGGTGGATCTGGACCGAGCAGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 72 bp | GAGCTCGGTCAGTGGACATTTTACCTTCCTTCGGGCTaGCGGCAGCAGGAAGACTGCTCCAGTCAAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ELGQWTFYLPSG*RQQEDCSSQGS Trigger: GGACCCTTGACTGGAGCAGTCTTCCTGCTGCCGTCAGCCCGAAGGAAGGTAAAATGTCCACTGACCGAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | GTCTTTGGGTGTCTTCTGTGCACTTGCCTTGCTCTTTaGTTTCCCCTTCCCGGAGGGAGGCTCACTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VFGCLLCTCLAL*FPLPGGRLTAS Trigger: GCTGGCAGTGAGCCTCCCTCCGGGAAGGGGAAAGCAAAGAGCAAGGCAAGTGCACAGAAGACACCCAAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | AAGCACGATGTCTGCCAAAGTGAAGTACAGTCCTTCTaGAAACACGTGCTCCAGAGGCGGGAGGTCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: KHDVCQSEVQSF*KHVLQRREVGG Trigger: GCCGCCGACCTCCCGCCTCTGGAGCACGTGTTTGCAGAAGGACTGTACTTCACTTTGGCAGACATCGTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | CACTTGAACAGAGTAGCCGTGTTCTCCTGCTGCTGCTaGTCGGTCCAGATCCACCAGGCCCATGCACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: HLNRVAVFSCCC*SVQIHQAHALL Trigger: AAGCAGTGCATGGGCCTGGTGGATCTGGACCGAGCAGCAGCAGCAGGAGAACACGGCTACTCTGTTCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | GATCACTTGAACAGAGTAGCCGTGTTCTCCTGCTGCTaGTGCTCGGTCCAGATCCACCAGGCCCATGCACTG | + |
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Preference number: 6 (lower is better) Translates to: DHLNRVAVFSCC*CSVQIHQAHAL Trigger: CAGTGCATGGGCCTGGTGGATCTGGACCGAGCAGCAGCAGCAGGAGAACACGGCTACTCTGTTCAAGTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CCA 72 bp | GCCCATGCACTGCTTCCCTATGAGTCTCCTCTCGGGTaGGAGCTGGACAGCTGTCTGATCGGCAAATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AHALLPYESPLG*ELDSCLIGKSA Trigger: TGCAGATTTGCCGATCAGACAGCTGTCCAGCTCCCACCCGAGAGGAGACTCATAGGGAAGCAGTGCATGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | AGAGATCACTTGAACAGAGTAGCCGTGTTCTCCTGCTaGTGCTGCTCGGTCCAGATCCACCAGGCCCATGCA | + |
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Preference number: 6 (lower is better) Translates to: RDHLNRVAVFSC*CCSVQIHQAHA Trigger: TGCATGGGCCTGGTGGATCTGGACCGAGCAGCAGCAGCAGGAGAACACGGCTACTCTGTTCAAGTGATCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 72 bp | AGTCTTTGGGTGTCTTCTGTGCACTTGCCTTGCTCTTaGCTTTCCCCTTCCCGGAGGGAGGCTCACTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLWVSSVHLPCS*LSPSRREAHCQ Trigger: CTGGCAGTGAGCCTCCCTCCGGGAAGGGGAAAGCAAAGAGCAAGGCAAGTGCACAGAAGACACCCAAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 72 bp | CCCGTGTTTGGATGCAGTGCTCGATCACCATGTCTGTaGCCACTCCACAAGCGTGCAAGGCCACCCCAATGT | + |
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Preference number: 6 (lower is better) Translates to: PVFGCSARSPCL*PLHKRARPPQC Trigger: ACATTGGGGTGGCCTTGCACGCTTGTGGAGTGGCAACAGACATGGTGATCGAGCACTGCATCCAAACACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 72 bp | ATGAGTCTCCTCTCGGGTGGGAGCTGGACAGCTGTCTaGTCGGCAAATCTGCAGAGGAGCATGTGTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: MSLLSGGSWTAV*SANLQRSMCSL Trigger: CAAGGAACACATGCTCCTCTGCAGATTTGCCGATCAGACAGCTGTCCAGCTCCCACCCGAGAGGAGACTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | CTTGGAGGGAGCAGCCAAGTCTTTGGGTGTCTTCTGTaGACTTGCCTTGCTCTTTGCTTTCCCCTTCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LGGSSQVFGCLL*TCLALCFPLPG Trigger: TCCGGGAAGGGGAAAGCAAAGAGCAAGGCAAGTGCACAGAAGACACCCAAAGACTTGGCTGCTCCCTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | TCTGCCAAAGTGAAGTACAGTCCTTCTGCAAACACGTaGTCCAGAGGCGGGAGGTCGGCGGCTTTTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SAKVKYSPSANT*SRGGRSAAFAF Trigger: GAAAGCAAAAGCCGCCGACCTCCCGCCTCTGGAGCACGTGTTTGCAGAAGGACTGTACTTCACTTTGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | CCGTGTTTGGATGCAGTGCTCGATCACCATGTCTGTTaGCACTCCACAAGCGTGCAAGGCCACCCCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: PCLDAVLDHHVC*HSTSVQGHPNV Trigger: AACATTGGGGTGGCCTTGCACGCTTGTGGAGTGGCAACAGACATGGTGATCGAGCACTGCATCCAAACACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | GGGCATGTGATGAAGGAAGCCCGTGTTTGGATGCAGTaGTCGATCACCATGTCTGTTGCCACTCCACAAGCG | + |
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Preference number: 6 (lower is better) Translates to: GHVMKEARVWMQ*SITMSVATPQA Trigger: CGCTTGTGGAGTGGCAACAGACATGGTGATCGAGCACTGCATCCAAACACGGGCTTCCTTCATCACATGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 90 bp | CATGTTGTTCTTGGGAGAGCAGCTCTCTGGCTCCATAGAGATCACTaGAACAGAGTAGCCGTGTTCTCCTGCTGCTGCTGCTCGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HVVLGRAALWLHRDH*NRVAVFSCCCCSVQ Trigger: CTGGACCGAGCAGCAGCAGCAGGAGAACACGGCTACTCTGTTCAAGTGATCTCTATGGAGCCAGAGAGCTGCTCTCCCAAGAACAACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | TTCCCGGAGGGAGGCTCACTGCCAGCAGCCTTCTGTTaGTTCAGCTTCTGTCTTCGGAGTTTGTCATCATTG | + |
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Preference number: 6 (lower is better) Translates to: FPEGGSLPAAFC*FSFCLRSLSSL Trigger: CAATGATGACAAACTCCGAAGACAGAAGCTGAAGCAACAGAAGGCTGCTGGCAGTGAGCCTCCCTCCGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 72 bp | GTAACAGCAGGGGCATGTGATGAAGGAAGCCCGTGTTaGGATGCAGTGCTCGATCACCATGTCTGTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VTAGACDEGSPC*DAVLDHHVCCH Trigger: GTGGCAACAGACATGGTGATCGAGCACTGCATCCAAACACGGGCTTCCTTCATCACATGCCCCTGCTGTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 90 bp | AATGAACCCGTAACAGCAGGGGCATGTGATGAAGGAAGCCCGTGTTaGGATGCAGTGCTCGATCACCATGTCTGTTGCCACTCCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: NEPVTAGACDEGSPC*DAVLDHHVCCHSTS Trigger: GCTTGTGGAGTGGCAACAGACATGGTGATCGAGCACTGCATCCAAACACGGGCTTCCTTCATCACATGCCCCTGCTGTTACGGGTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 72 bp | GTTGCTAGCAGCTGCATCTTCTTGCACTGTGAGCTTTaGGAACGCCACCTTCAGTTCCAGACTCTTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: VASSCIFLHCEL*ERHLQFQTLGG Trigger: CCCTCCAAGAGTCTGGAACTGAAGGTGGCGTTCTCAAAGCTCACAGTGCAAGAAGATGCAGCTGCTAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | GGCAAACAGCAATTCTGGACAATCGGAGGGAGCGCCTaGTTTGAAATAACCTGTATTTCCAGGTCCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: GKQQFWTIGGSA*FEITCISRSWG Trigger: GCCCCAGGACCTGGAAATACAGGTTATTTCAAAGCAGGCGCTCCCTCCGATTGTCCAGAATTGCTGTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | GCCTGCCCTACAGAAAACGTCAGGTTGATCTACCACTaGAGGCAAACAGCAATTCTGGACAATCGGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ACPTENVRLIYH*RQTAILDNRRE Trigger: CTCCCTCCGATTGTCCAGAATTGCTGTTTGCCTGCAGTGGTAGATCAACCTGACGTTTTCTGTAGGGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 90 bp | GTGTCTCAGGACAACAGCAAGGCCTGCCCTACAGAAAACGTCAGGTaGATCTACCACTGCAGGCAAACAGCAATTCTGGACAATCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VSQDNSKACPTENVR*IYHCRQTAILDNRR Trigger: CCTCCGATTGTCCAGAATTGCTGTTTGCCTGCAGTGGTAGATCAACCTGACGTTTTCTGTAGGGCAGGCCTTGCTGTTGTCCTGAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 90 bp | GCAGCCTTCTGTTGCTTCAGCTTCTGTCTTCGGAGTTTGTCATCATaGTGTACTCTGACAGGCTCACTGAGCTTCCTCTCGAGCTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: AAFCCFSFCLRSLSS*CTLTGSLSFLSSSR Trigger: CCTAGAGCTCGAGAGGAAGCTCAGTGAGCCTGTCAGAGTACACAATGATGACAAACTCCGAAGACAGAAGCTGAAGCAACAGAAGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 72 bp | GACGTGTGGAGAGGAAAGATGCAGCCTTCTGTTTGGTaGGAGTACTCCAGGTACAGAGATTCCTCCGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: DVWRGKMQPSVW*EYSRYRDSSVG Trigger: TCCTACGGAGGAATCTCTGTACCTGGAGTACTCTCACCAAACAGAAGGCTGCATCTTTCCTCTCCACACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | AGACTGCTCCAGTCAAGGGTCCAAGCAGGACAAGGGTaGGGAGAAAACATGGCTTCAATGCCTTTTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: RLLQSRVQAGQG*GENMASMPFSI Trigger: GATGGAAAAAGGCATTGAAGCCATGTTTTCTCCGCACCCTTGTCCTGCTTGGACCCTTGACTGGAGCAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 72 bp | GACAACAGCAAGGCCTGCCCTACAGAAAACGTCAGGTaGATCTACCACTGCAGGCAAACAGCAATTCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: DNSKACPTENVR*IYHCRQTAILD Trigger: GTCCAGAATTGCTGTTTGCCTGCAGTGGTAGATCAACCTGACGTTTTCTGTAGGGCAGGCCTTGCTGTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 72 bp | TTCAGTTCCAGACTCTTGGAGGGAGCAGCCAAGTCTTaGGGTGTCTTCTGTGCACTTGCCTTGCTCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: FSSRLLEGAAKS*GVFCALALLFA Trigger: AGCAAAGAGCAAGGCAAGTGCACAGAAGACACCCAAAGACTTGGCTGCTCCCTCCAAGAGTCTGGAACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 72 bp | ACAACAGCAAGGCCTGCCCTACAGAAAACGTCAGGTTaGTCTACCACTGCAGGCAAACAGCAATTCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: TTARPALQKTSG*STTAGKQQFWT Trigger: TGTCCAGAATTGCTGTTTGCCTGCAGTGGTAGATCAACCTGACGTTTTCTGTAGGGCAGGCCTTGCTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS TCA 72 bp | GGTGAATACAGGGCAAAAGCACGATGTCTGCCAAAGTaGAGTACAGTCCTTCTGCAAACACGTGCTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GEYRAKARCLPK*STVLLQTRAPE Trigger: CTCTGGAGCACGTGTTTGCAGAAGGACTGTACTTCACTTTGGCAGACATCGTGCTTTTGCCCTGTATTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | TGCTCGATCACCATGTCTGTTGCCACTCCACAAGCGTaGAAGGCCACCCCAATGTTAAACATTCCTGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: CSITMSVATPQA*KATPMLNIPVK Trigger: TTTCACAGGAATGTTTAACATTGGGGTGGCCTTGCACGCTTGTGGAGTGGCAACAGACATGGTGATCGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS GCA 72 bp | CGGGTGGGAGCTGGACAGCTGTCTGATCGGCAAATCTaGAGAGGAGCATGTGTTCCTTGTATGATAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: RVGAGQLSDRQI*RGACVPCMIKF Trigger: AAACTTTATCATACAAGGAACACATGCTCCTCTGCAGATTTGCCGATCAGACAGCTGTCCAGCTCCCACCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CCA 72 bp | TCTTCAGGGATAGTTGGGGGATGCTCAGAGGACTCTTaGAGAAAATTCTCAACAGCCAAAGGGATGGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SSGIVGGCSEDS*RKFSTAKGMVS Trigger: ACTCACCATCCCTTTGGCTGTTGAGAATTTTCTCCAAGAGTCCTCTGAGCATCCCCCAACTATCCCTGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 72 bp | TTCTTCAGGGATAGTTGGGGGATGCTCAGAGGACTCTaGGAGAAAATTCTCAACAGCCAAAGGGATGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: FFRDSWGMLRGL*EKILNSQRDGE Trigger: CTCACCATCCCTTTGGCTGTTGAGAATTTTCTCCAAGAGTCCTCTGAGCATCCCCCAACTATCCCTGAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 72 bp | TGTTGCTTCAGCTTCTGTCTTCGGAGTTTGTCATCATaGTGTACTCTGACAGGCTCACTGAGCTTCCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: CCFSFCLRSLSS*CTLTGSLSFLS Trigger: CGAGAGGAAGCTCAGTGAGCCTGTCAGAGTACACAATGATGACAAACTCCGAAGACAGAAGCTGAAGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 90 bp | AAACAAAGTTACAGACGTGTGGAGAGGAAAGATGCAGCCTTCTGTTaGGTGAGAGTACTCCAGGTACAGAGATTCCTCCGTAGGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: KQSYRRVERKDAAFC*VRVLQVQRFLRRTF Trigger: AAAAGTCCTACGGAGGAATCTCTGTACCTGGAGTACTCTCACCAAACAGAAGGCTGCATCTTTCCTCTCCACACGTCTGTAACTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 90 bp | CCAAGTTCGTCACTTCTCTTCTTAGCACGGATTAATGATAATTCCTaGTTCTCTATTAACGTAACCTGGCACGAGGGCAGCATGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PSSSLLFLARINDNS*FSINVTWHEGSMWA Trigger: TGCCCACATGCTGCCCTCGTGCCAGGTTACGTTAATAGAGAACAAGGAATTATCATTAATCCGTGCTAAGAAGAGAAGTGACGAACTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 90 bp | GCTCATCTACAGCTGCTACTTCATCAGAATTCACAGGCTGTTTCCTaGCAGAGTTCAGCAATTCTGGTAAATACAGAAAGTAGATCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AHLQLLLHQNSQAVS*QSSAILVNTESRSH Trigger: GTGGGATCTACTTTCTGTATTTACCAGAATTGCTGAACTCTGCAAGGAAACAGCCTGTGAATTCTGATGAAGTAGCAGCTGTAGATGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 72 bp | CAGCTGCTACTTCATCAGAATTCACAGGCTGTTTCCTaGCAGAGTTCAGCAATTCTGGTAAATACAGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: QLLLHQNSQAVS*QSSAILVNTES Trigger: ACTTTCTGTATTTACCAGAATTGCTGAACTCTGCAAGGAAACAGCCTGTGAATTCTGATGAAGTAGCAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 90 bp | GTATCTGTACTTTCTTCAGTGAGGACTAAGCAAACGTTAAAGACCTaGCATTCACAGTATGATAGTAAAAACAAAGTTACAGACGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSVLSSVRTKQTLKT*HSQYDSKNKVTDVW Trigger: CCACACGTCTGTAACTTTGTTTTTACTATCATACTGTGAATGCAAGGTCTTTAACGTTTGCTTAGTCCTCACTGAAGAAAGTACAGATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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| CDS CAA 72 bp | CTTTCTTCAGTGAGGACTAAGCAAACGTTAAAGACCTaGCATTCACAGTATGATAGTAAAAACAAAGTTACA | + |
|
Preference number: 6 (lower is better) Translates to: LSSVRTKQTLKT*HSQYDSKNKVT Trigger: TGTAACTTTGTTTTTACTATCATACTGTGAATGCAAGGTCTTTAACGTTTGCTTAGTCCTCACTGAAGAAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029651.11 ENSMUST00000080583.6 |
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