Pregenerated sensors for GSTA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025934Ensembl transcript IDs: ENSMUST00000027067.15, ENSMUST00000121676.8, ENSMUST00000124990.3
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTATTTGGTCAGGAAGGGCACTCTCCATAAGGAAAGATTATTTTTaGATCAACCAGAATTTGACAGGAAGATTTCTCCGTTTGACAAGG | + |
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Preference number: 1 (lower is better) Translates to: CIWSGRALSIRKDYF*INQNLTGRFLRLTR Trigger: CCTTGTCAAACGGAGAAATCTTCCTGTCAAATTCTGGTTGATGCAAAAATAATCTTTCCTTATGGAGAGTGCCCTTCCTGACCAAATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR TCA 90 bp | GACAGGAAGATTTCTCCGTTTGACAAGGATATGACAGCTATTGAATaGCAATGTTCGAATACTCCAGAGTCTAAGAAGCTTGTTTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: DRKISPFDKDMTAIE*QCSNTPESKKLVLF Trigger: AAACAAAACAAGCTTCTTAGACTCTGGAGTATTCGAACATTGTCATTCAATAGCTGTCATATCCTTGTCAAACGGAGAAATCTTCCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGTATCCATCATTCATGCAGCCCCAGGGAAATCAATTGCTCTATATTGAAGCATCAACCAGAATTTaGCAGGAAGATTTCTCCGTT | + |
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Preference number: 2 (lower is better) Translates to: LLYPSFMQPQGNQLLYIEASTRI*QEDFSV Trigger: AACGGAGAAATCTTCCTGTCAAATTCTGGTTGATGC...TTCAATATAGAGCAATTGATTTCCCTGGGGCTGCATGAATGATGGATACAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR-3UTR TCA 90 bp | TTATTACAGAAATTCAAGATTCTGTGGCTGGGTAATTTGATTGTCCCTGCTGTAGAGTTCCTCACAGTTTaGGTGTGCACACATCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LLQKFKILWLGNLIVPAVEFLTV*VCTHLC Trigger: ACACAGATGTGTGCACACTCAAACTGTGAGGAACTC...TACAGCAGGGACAATCAAATTACCCAGCCACAGAATCTTGAATTTCTGTAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR-3UTR CCA 90 bp | CTGTATCCATCATTCATGCAGCCCCAGGGAAATCAATTGCTCTATATTGAACATAGAAGGTTGGCTTTGTaGGGGCTATGTACTTATAGT | + |
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Preference number: 2 (lower is better) Translates to: LYPSFMQPQGNQLLYIEHRRLAL*GLCTYS Trigger: ACTATAAGTACATAGCCCCCACAAAGCCAACCTTCT...ATGTTCAATATAGAGCAATTGATTTCCCTGGGGCTGCATGAATGATGGATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGTATCCATCATTCATGCAGCCCCAGGGAAATCAATTGCTCTATATTGAACGTTTGACAAGGATATaGCAGCTATTGAATGACAAT | + |
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Preference number: 2 (lower is better) Translates to: LLYPSFMQPQGNQLLYIERLTRI*QLLNDN Trigger: ATTGTCATTCAATAGCTGTCATATCCTTGTCAAACG...TTCAATATAGAGCAATTGATTTCCCTGGGGCTGCATGAATGATGGATACAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR CAA 90 bp | TTAATACTTTTATTACAGAAATTCAAGATTCTGTGGCTGGGTAATTaGATTGTCCCTGCTGTATCCATCATTCATGCAGCCCCAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LILLLQKFKILWLGN*IVPAVSIIHAAPGK Trigger: TTTCCCTGGGGCTGCATGAATGATGGATACAGCAGGGACAATCAAATTACCCAGCCACAGAATCTTGAATTTCTGTAATAAAAGTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR-3UTR TCA 90 bp | TTATTACAGAAATTCAAGATTCTGTGGCTGGGTAATTTGATTGTCCCTGCTGTACATGTCTACCTGAATTaGCACAGACGCCTTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LLQKFKILWLGNLIVPAVHVYLN*HRRLRK Trigger: TTTTCTAAGGCGTCTGTGTCAATTCAGGTAGACATG...TACAGCAGGGACAATCAAATTACCCAGCCACAGAATCTTGAATTTCTGTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR-3UTR TCA 90 bp | TTATTACAGAAATTCAAGATTCTGTGGCTGGGTAATTTGATTGTCCCTGCTGTAATGACAGCTATTGAATaGCAATGTTCGAATACTCCA | + |
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Preference number: 2 (lower is better) Translates to: LLQKFKILWLGNLIVPAVMTAIE*QCSNTP Trigger: TGGAGTATTCGAACATTGTCATTCAATAGCTGTCAT...TACAGCAGGGACAATCAAATTACCCAGCCACAGAATCTTGAATTTCTGTAATAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR-3UTR CAA 90 bp | CTGCTGTATCCATCATTCATGCAGCCCCAGGGAAATCAATTGCTCTATATTGAACACATCTGTGTGTATTaGGTCAGGAAGGGCACTCTC | + |
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Preference number: 3 (lower is better) Translates to: LLYPSFMQPQGNQLLYIEHICVY*VRKGTL Trigger: GAGAGTGCCCTTCCTGACCAAATACACACAGATGTG...TTCAATATAGAGCAATTGATTTCCCTGGGGCTGCATGAATGATGGATACAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR TCA 72 bp | TATTACAGAAATTCAAGATTCTGTGGCTGGGTAATTTaGTTGTCCCTGCTGTATCCATCATTCATGCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: YYRNSRFCGWVI*LSLLYPSFMQP Trigger: GGGCTGCATGAATGATGGATACAGCAGGGACAATCAAATTACCCAGCCACAGAATCTTGAATTTCTGTAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR GCA 72 bp | TCAGGAAGGGCACTCTCCATAAGGAAAGATTATTTTTaGATCAACCAGAATTTGACAGGAAGATTTCTCCGT | + |
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Preference number: 3 (lower is better) Translates to: SGRALSIRKDYF*INQNLTGRFLR Trigger: ACGGAGAAATCTTCCTGTCAAATTCTGGTTGATGCAAAAATAATCTTTCCTTATGGAGAGTGCCCTTCCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR TCA 72 bp | ATTTCTCCGTTTGACAAGGATATGACAGCTATTGAATaGCAATGTTCGAATACTCCAGAGTCTAAGAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: ISPFDKDMTAIE*QCSNTPESKKL Trigger: AAGCTTCTTAGACTCTGGAGTATTCGAACATTGTCATTCAATAGCTGTCATATCCTTGTCAAACGGAGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR TCA 72 bp | AATTTGACAGGAAGATTTCTCCGTTTGACAAGGATATaGCAGCTATTGAATGACAATGTTCGAATACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: NLTGRFLRLTRI*QLLNDNVRILQ Trigger: CTGGAGTATTCGAACATTGTCATTCAATAGCTGTCATATCCTTGTCAAACGGAGAAATCTTCCTGTCAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR-3UTR CAA 90 bp | TATAGAAACCTTAGGAATGGGACACACAGAATGTCCAGTTCTGTATTAGGAATACCCCAGGGAAATCAATaGCTCTATATTGAACATAAA | + |
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Preference number: 3 (lower is better) Translates to: YRNLRNGTHRMSSSVLGIPQGNQ*LYIEHK Trigger: TTTATGTTCAATATAGAGCAATTGATTTCCCTGGGG...TATTCCTAATACAGAACTGGACATTCTGTGTGTCCCATTCCTAAGGTTTCTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS-3UTR TCA 90 bp | ACATCTGTGTGTATTTGGTCAGGAAGGGCACTCTCCATAAGGAAAGATTATTTTCTGTGGGGAGGTTGCTaGCTCTGCTTCTCAGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: TSVCIWSGRALSIRKDYFLWGGC*LCFSAL Trigger: AAGCGCTGAGAAGCAGAGTCAGCAACCTCCCCACAG...AAAATAATCTTTCCTTATGGAGAGTGCCCTTCCTGACCAAATACACACAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS-3UTR GCA 90 bp | CTGTATCCATCATTCATGCAGCCCCAGGGAAATCAATTGCTCTATATTGAACATGATCTTGGCAAGGCTTaGCTCTTTCTCCTCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LYPSFMQPQGNQLLYIEHDLGKA*LFLLRG Trigger: CCCCCTGAGGAGAAAGAGGCAAGCCTTGCCAAGATC...ATGTTCAATATAGAGCAATTGATTTCCCTGGGGCTGCATGAATGATGGATACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS-3UTR GCA 90 bp | ACATCTGTGTGTATTTGGTCAGGAAGGGCACTCTCCATAAGGAAAGATTATTTTTCTACCATGGGCACTTaGTGGAACATCAGACTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TSVCIWSGRALSIRKDYFSTMGT*WNIRLP Trigger: TGGGAGTCTGATGTTCCAGCAAGTGCCCATGGTAGA...AAAATAATCTTTCCTTATGGAGAGTGCCCTTCCTGACCAAATACACACAGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS-3UTR TCA 90 bp | TTATTACAGAAATTCAAGATTCTGTGGCTGGGTAATTTGATTGTCCCTGCTGTATCCTGGTTTGTTCCTTaGTCTTGGCAAGGCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LLQKFKILWLGNLIVPAVSWFVP*SWQGLP Trigger: AGGCAAGCCTTGCCAAGATCAAGGAACAAACCAGGA...TACAGCAGGGACAATCAAATTACCCAGCCACAGAATCTTGAATTTCTGTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR CAA 72 bp | GTCAGGAAGGGCACTCTCCATAAGGAAAGATTATTTTaGCATCAACCAGAATTTGACAGGAAGATTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: VRKGTLHKERLF*HQPEFDRKISP Trigger: CGGAGAAATCTTCCTGTCAAATTCTGGTTGATGCAAAAATAATCTTTCCTTATGGAGAGTGCCCTTCCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS-3UTR TCA 90 bp | TTCAAGATTCTGTGGCTGGGTAATTTGATTGTCCCTGCTGTATCCATCATTCATGAAAATCTTCTTTGCTaGCTCAACACATTTTGCGTC | + |
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Preference number: 4 (lower is better) Translates to: FKILWLGNLIVPAVSIIHENLLC*LNTFCV Trigger: GACGCAAAATGTGTTGAGTCAGCAAAGAAGATTTTC...ATGAATGATGGATACAGCAGGGACAATCAAATTACCCAGCCACAGAATCTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS-3UTR GCA 90 bp | TTATTACAGAAATTCAAGATTCTGTGGCTGGGTAATTTGATTGTCCCTGCTGTAGCTCCATTCTTCCCCTaGCATCAAAGTAATGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLQKFKILWLGNLIVPAVAPFFP*HQSNEG Trigger: TCCTTCATTACTTTGATGGCAGGGGAAGAATGGAGC...TACAGCAGGGACAATCAAATTACCCAGCCACAGAATCTTGAATTTCTGTAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| 3UTR CAA 72 bp | TTATTACAGAAATTCAAGATTCTGTGGCTGGGTAATTaGATTGTCCCTGCTGTATCCATCATTCATGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLQKFKILWLGN*IVPAVSIIHAA Trigger: GGCTGCATGAATGATGGATACAGCAGGGACAATCAAATTACCCAGCCACAGAATCTTGAATTTCTGTAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS GCA 90 bp | AGGGAAGTAACGGTTCCTGGTTTGTTCCTTGATCTTGGCAAGGCTTaGCTCTTTCTCCTCAGGGGGCATGTGGGGGTAATAGAGAATCAT | + |
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Preference number: 5 (lower is better) Translates to: REVTVPGLFLDLGKA*LFLLRGHVGVIENH Trigger: ATGATTCTCTATTACCCCCACATGCCCCCTGAGGAGAAAGAGGCAAGCCTTGCCAAGATCAAGGAACAAACCAGGAACCGTTACTTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027067.15 ENSMUST00000121676.8 ENSMUST00000124990.3 |
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| CDS-3UTR CAA 90 bp | CTGTATCCATCATTCATGCAGCCCCAGGGAAATCAATTGCTCTATATTGAACATCATCACTTCGTAACCTaGCCAGGTCATCCCGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: LYPSFMQPQGNQLLYIEHHHFVT*PGHPEF Trigger: AAACTCGGGATGACCTGGCAAGGTTACGAAGTGATG...ATGTTCAATATAGAGCAATTGATTTCCCTGGGGCTGCATGAATGATGGATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS-3UTR CAA 90 bp | CTGCTGTATCCATCATTCATGCAGCCCCAGGGAAATCAATTGCTCTATATTGAAGTTTGTTCCTTGATCTaGGCAAGGCTTGCCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LLYPSFMQPQGNQLLYIEVCSLI*ARLASF Trigger: GAAAGAGGCAAGCCTTGCCAAGATCAAGGAACAAAC...TTCAATATAGAGCAATTGATTTCCCTGGGGCTGCATGAATGATGGATACAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS-3UTR CAA 90 bp | CTGTATCCATCATTCATGCAGCCCCAGGGAAATCAATTGCTCTATATTGAACATTTCCTGGTTTGTTCCTaGATCTTGGCAAGGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LYPSFMQPQGNQLLYIEHFLVCS*ILARLA Trigger: GGCAAGCCTTGCCAAGATCAAGGAACAAACCAGGAA...ATGTTCAATATAGAGCAATTGATTTCCCTGGGGCTGCATGAATGATGGATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027067.15 |
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| CDS CAA 72 bp | CTGACTCTGCTTCTCAGCGCTTTCAGGAGAGGGAAGTaGTCCACAACGCCCGGGTCCAGCTCTTCCACATGG | + |
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Preference number: 6 (lower is better) Translates to: LTLLLSAFRRGK*STTPGSSSSTW Trigger: CCATGTGGAAGAGCTGGACCCGGGCGTTGTGGACAACTTCCCTCTCCTGAAAGCGCTGAGAAGCAGAGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027067.15 ENSMUST00000121676.8 |
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| CDS GCA 72 bp | CATGGTAGAGGAGTTCAACCAGGGCAATATCAGCCCTaGTCAGCCTGTTGCCAACGAGATAATCTTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: HGRGVQPGQYQP*SACCQRDNLVH Trigger: ATGGACAAGATTATCTCGTTGGCAACAGGCTGAGCAGGGCTGATATTGCCCTGGTTGAACTCCTCTACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027067.15 ENSMUST00000121676.8 ENSMUST00000124990.3 |
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| CDS CAA 72 bp | CTTGCTGGAACATCAGACTCCCATCACTTCGTAACCTaGCCAGGTCATCCCGAGTTTTCAGAAATTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LAGTSDSHHFVT*PGHPEFSEIFL Trigger: AAGAAAAATTTCTGAAAACTCGGGATGACCTGGCAAGGTTACGAAGTGATGGGAGTCTGATGTTCCAGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027067.15 ENSMUST00000121676.8 |
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