Pregenerated sensors for GSTA2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057933

Ensembl transcript IDs: ENSMUST00000034902.12, ENSMUST00000125479.8, ENSMUST00000129247.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR TCA 90 bp	GTATTTTATAATTGCAAACAATTAGAGGCCAGTATCTGTGGCTCCATCAATGCATTCTGCCCCGGGCATTaGAGTAGTGAAGCACGGGCT	+
Preference number: 4 (lower is better) Translates to: VFYNCKQLEASICGSINAFCPGH*SSEARA Trigger: AGCCCGTGCTTCACTACTTCAATGCCCGGGGCAGAA...TGCATTGATGGAGCCACAGATACTGGCCTCTAATTGTTTGCAATTATAAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034902.12
CDS-3UTR CCA 90 bp	TTTTATAATTGCAAACAATTAGAGGCCAGTATCTGTGGCTCCATCAATGCAGCCAAGGGGTCAGAAGGCTaGCATCAAGCTCTTCAACAT	+
Preference number: 4 (lower is better) Translates to: FYNCKQLEASICGSINAAKGSEG*HQALQH Trigger: ATGTTGAAGAGCTTGATGCCAGCCTTCTGACCCCTT...GGCTGCATTGATGGAGCCACAGATACTGGCCTCTAATTGTTTGCAATTATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034902.12
CDS-3UTR GCA 90 bp	TTTTATAATTGCAAACAATTAGAGGCCAGTATCTGTGGCTCCATCAATGCAGCCGGACATAATACCAATTaGCCAATCATTTCAGTCAGA	+
Preference number: 4 (lower is better) Translates to: FYNCKQLEASICGSINAAGHNTN*PIISVR Trigger: TCTGACTGAAATGATTGGGCAATTGGTATTATGTCC...GGCTGCATTGATGGAGCCACAGATACTGGCCTCTAATTGTTTGCAATTATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034902.12
CDS-3UTR GCA 90 bp	TTTTATAATTGCAAACAATTAGAGGCCAGTATCTGTGGCTCCATCAATGCAGCCCTTGAAAACCTTCCTTaGTTCTTCAATTTGTTTTGC	+
Preference number: 4 (lower is better) Translates to: FYNCKQLEASICGSINAALENLP*FFNLFC Trigger: GCAAAACAAATTGAAGAAGCAAGGAAGGTTTTCAAG...GGCTGCATTGATGGAGCCACAGATACTGGCCTCTAATTGTTTGCAATTATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034902.12
CDS-3UTR CAA 90 bp	TTTTATAATTGCAAACAATTAGAGGCCAGTATCTGTGGCTCCATCAATGCAGCCTTTGCCAAGGCAGTCTaGGCTTCTCTTTGGTCTGGG	+
Preference number: 5 (lower is better) Translates to: FYNCKQLEASICGSINAAFAKAV*ASLWSG Trigger: CCCAGACCAAAGAGAAGCCAAGACTGCCTTGGCAAA...GGCTGCATTGATGGAGCCACAGATACTGGCCTCTAATTGTTTGCAATTATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034902.12
CDS GCA 72 bp	AAAGGCAGGCAAGTAACGGTTTTTGGTCCTGTCTTTTaGCAAGGCAGTCTTGGCTTCTCTTTGGTCTGGGGG	+
Preference number: 6 (lower is better) Translates to: KGRQVTVFGPVF*QGSLGFSLVWG Trigger: CCCCCAGACCAAAGAGAAGCCAAGACTGCCTTGGCAAAAGACAGGACCAAAAACCGTTACTTGCCTGCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034902.12 ENSMUST00000125479.8 ENSMUST00000129247.2
CDS CCA 72 bp	GTCCTGTCTTTTGCCAAGGCAGTCTTGGCTTCTCTTTaGTCTGGGGGACATAATACCAATTGCCCAATCATT	+
Preference number: 6 (lower is better) Translates to: VLSFAKAVLASL*SGGHNTNCPII Trigger: AATGATTGGGCAATTGGTATTATGTCCCCCAGACCAAAGAGAAGCCAAGACTGCCTTGGCAAAAGACAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034902.12 ENSMUST00000125479.8 ENSMUST00000129247.2

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