Pregenerated sensors for GSS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027610Ensembl transcript IDs: ENSMUST00000079691.13, ENSMUST00000126322.8, ENSMUST00000130881.8, ENSMUST00000155347.2, ENSMUST00000175993.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACGGCTGGAAGGCTGCTaGGGGAAGATACCCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: YEPLPQSSFHSHTPKIWGRLEGC*GKIPWV Trigger: AACCCAGGGTATCTTCCCTCAGCAGCCTTCCAGCCG...TCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGAGACAAGCTCCCCCCCTCAGAAGAGGAGTaGCAAGTACAGGGGATAGAA | + |
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Preference number: 2 (lower is better) Translates to: LGFPFPEALEVYGRDKLPPSEEE*QVQGIE Trigger: TTCTATCCCCTGTACTTGGCACTCCTCTTCTGAGGG...GGGGAGCTTGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| 3UTR-3UTR TCA 90 bp | TATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGAGGGTTTTCCCTTCCCTaGAGCTTTGGAGGTCTATGG | + |
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Preference number: 2 (lower is better) Translates to: YEPLPQSSFHSHTPKIWGGFSLP*SFGGLW Trigger: CCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCC...TCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGCCTTCCCTGAAGCTTTaGAGGTCTATGGAAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: LCLKAASIPTLQRSGDLQPSLKL*RSMEET Trigger: TGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGG...CTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTGGAAGGCTGCTGAGCCCTCAGAAGAGGAGTaGCAAGTACAGGGGATAGAA | + |
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Preference number: 2 (lower is better) Translates to: KSSNGIIAFLVLGWKAAEPSEEE*QVQGIE Trigger: TTCTATCCCCTGTACTTGGCACTCCTCTTCTGAGGG...CTCAGCAGCCTTCCAGCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| 3UTR-3UTR CCA 90 bp | TATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTTCCCTGAAGCTTTaGAGGTCTATGGAAGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: YEPLPQSSFHSHTPKIWGPSLKL*RSMEET Trigger: TGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGG...TCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| 3UTR TCA 72 bp | GCTGCTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTaGAGCTTTGGAGGTCTATGGAAGAGACAAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AAEGRYPGFSLP*SFGGLWKRQAP Trigger: GGGAGCTTGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAAGTCCCTTCCCTGAAGCTTaGGAGGTCTATGGAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ASKQLPFPHSKDLGTSRSPFPEA*EVYGRD Trigger: GTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGG...ACTTCTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGCCCTTCCCTGAAGCTTaGGAGGTCTATGGAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FMSLCLKAASIPTLQRSGPFPEA*EVYGRD Trigger: GTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGG...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| 3UTR CCA 72 bp | GGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTaGAGGTCTATGGAAGAGACAAGCTCCCCTAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: GKIPWVFPSLKL*RSMEETSSPKI Trigger: TATCTTAGGGGAGCTTGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTAGAGCTCCCAGGCTTTaGCGATCCCCAGGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHSVLPQVKALEPAGKAGRAPRL*RSPGPV Trigger: GACTGGCCCTGGGGATCGCCAAAGCCTGGGAGCTCT...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGTGTCGGTGCACAGCTaGAGTCCGGGAGGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLREDTLGFPFPEALEVYVSVHS*SPGGQA Trigger: GGCCTGGCCTCCCGGACTCCAGCTGTGCACCGACAC...ATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGAGACAAGCTCCCCAGAGGCCAGCAAAGGTaGCTCGGAGGCGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LGFPFPEALEVYGRDKLPRGQQR*LGGGPQ Trigger: CTGTGGCCCGCCTCCGAGCCACCTTTGCTGGCCTCT...GGGGAGCTTGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | GCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCCCACTTGGGCAGGGCTaGCAGGCCGTAGCAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFASKQLPFPHSKDLGTSPLGQG*QAVASN Trigger: ATTGCTTGCTACGGCCTGGCAGCCCTGCCCAAGTGG...GGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | CTGCTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATCAGGACTGCCACTCCTaGCGCCACACCTCCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLREDTLGFPFPEALEVYQDCHS*RHTSVC Trigger: GCAGACGGAGGTGTGGCGGCAGGAGTGGCAGTCCTG...ATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTAGCTGCTTCTCATCCTaGAAGATGCTGCCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSVLPQVKALEPAGKAGSCFSS*KMLPQL Trigger: CAGCTGGGGCAGCATCTTGCAGGATGAGAAGCAGCT...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079691.13 |
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| CDS-3UTR GCA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTCTGCTCAGTTCCTGCTaGACCTTCTTAGTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSVLPQVKALEPAGKAGLLSSC*TFLVPA Trigger: GGCTGGGACTAAGAAGGTGCAGCAGGAACTGAGCAG...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | GGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGTGTCGGTGCACAGCTaGAGTCCGGGAGGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFMSLCLKAASIPTLQRSVSVHS*SPGGQA Trigger: GGCCTGGCCTCCCGGACTCCAGCTGTGCACCGACAC...AGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGAGCTCCCAGGCTTTaGCGATCCCCAGGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LREDTLGFPFPEALEVYGRAPRL*RSPGPV Trigger: GACTGGCCCTGGGGATCGCCAAAGCCTGGGAGCTCT...TCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | TATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGAAGAGGCCAGCAAAGGTaGCTCGGAGGCGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YEPLPQSSFHSHTPKIWGRGQQR*LGGGPQ Trigger: CTGTGGCCCGCCTCCGAGCCACCTTTGCTGGCCTCT...TCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | GCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCCAAGGGCCTCAGCAATaGCCTGGTCCCCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFASKQLPFPHSKDLGTSQGPQQ*PGPLLH Trigger: GTGAAGAAGGGGACCAGGCCATTGCTGAGGCCCTTG...GGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | GCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAAGTATACACTGGACCACTTaGGCAGGGCTGCCAGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: ASKQLPFPHSKDLGTSRSIHWTT*AGLPGR Trigger: ACGGCCTGGCAGCCCTGCCCAAGTGGTCCAGTGTAT...ACTTCTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | GCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAAGTCCAGGGCCAGTCCCTTaGTGGGGTTATTGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: ASKQLPFPHSKDLGTSRSPGPVP*WGYWTG Trigger: TCCTGTCCAATAACCCCAGCAAGGGACTGGCCCTGG...ACTTCTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | GCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCCTGCTCAGTTCCTGCTaGACCTTCTTAGTCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: AFASKQLPFPHSKDLGTSLLSSC*TFLVPA Trigger: GGCTGGGACTAAGAAGGTGCAGCAGGAACTGAGCAG...GGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | GACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTGGAAGGGGGTTGTCCAGGACTaGCACTCCTGCCGCCACACC | + |
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Preference number: 4 (lower is better) Translates to: DLQKSSNGIIAFLVLGWKGVVQD*HSCRHT Trigger: GGTGTGGCGGCAGGAGTGGCAGTCCTGGACAACCCC...CTTCCAGCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGGGGTTGTCCAGGACTaGCACTCCTGCCGCCACACC | + |
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Preference number: 4 (lower is better) Translates to: FMSLCLKAASIPTLQRSGGVVQD*HSCRHT Trigger: GGTGTGGCGGCAGGAGTGGCAGTCCTGGACAACCCC...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGGCCTCAGCAATGGCCTaGTCCCCTTCTTCACCCATG | + |
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Preference number: 4 (lower is better) Translates to: LCLKAASIPTLQRSGDLQASAMA*SPSSPM Trigger: CATGGGTGAAGAAGGGGACCAGGCCATTGCTGAGGC...CTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | TCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCCCAGCAGACCCACCCTaGTCAGTTCCTGCTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: SGDLQKSSNGIIAFLVLGPADPP*SVPAAP Trigger: AGGTGCAGCAGGAACTGAGCAGGGTGGGTCTGCTGG...GCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTTTGGTTCGAAGCAGGTaGCCCACATGCTTGTTCATC | + |
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Preference number: 4 (lower is better) Translates to: LHSVLPQVKALEPAGKAGLVRSR*PTCLFI Trigger: GATGAACAAGCATGTGGGGCACCTGCTTCGAACCAA...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | AAGACCATGAAGACTTGCAGGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATCAGGACTGCCACTCCTaGCGCCACACCTCCGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KTMKTCRVYEPLPQSSFHQDCHS*RHTSVC Trigger: GCAGACGGAGGTGTGGCGGCAGGAGTGGCAGTCCTG...ATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCCTGCAAGTCTTCATGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAGGAAGGCTGGGTTCTaGCTGACAGCATCCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: LCLKAASIPTLQRSGDLQRKAGF*LTASTS Trigger: ACTGGTGGATGCTGTCAGCCAGAACCCAGCCTTCCT...CTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | GCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAAGTGGGCCAGTCCCTTGCTaGGGTTATTGGACAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: ASKQLPFPHSKDLGTSRSGPVPC*GYWTGS Trigger: AGATCCTGTCCAATAACCCCAGCAAGGGACTGGCCC...ACTTCTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGAGACAAGCTCCCCGGGCCAGTCCCTTGCTaGGGTTATTGGACAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: LGFPFPEALEVYGRDKLPGPVPC*GYWTGS Trigger: AGATCCTGTCCAATAACCCCAGCAAGGGACTGGCCC...GGGGAGCTTGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTCTGTATGGCAATGTCTaGACACTTGGCAGCACGAGA | + |
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Preference number: 4 (lower is better) Translates to: LHSVLPQVKALEPAGKAGLYGNV*TLGSTR Trigger: TCTCGTGCTGCCAAGTGTCCAGACATTGCCATACAG...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGAGCTGGGATGCTGTaGGGACCTCAGCAACACGCC | + |
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Preference number: 4 (lower is better) Translates to: RSGDLQKSSNGIIAFLVLGAGML*GPQQHA Trigger: GGCGTGTTGCTGAGGTCCGCACAGCATCCCAGCTCC...GAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079691.13 |
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| CDS-3UTR GCA 90 bp | GCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAAGTACCCTGCTCAGTTCCTaGTGCACCTTCTTAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ASKQLPFPHSKDLGTSRSTLLSS*CTFLVP Trigger: TGGGACTAAGAAGGTGCAGCAGGAACTGAGCAGGGT...ACTTCTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGCCAGCAGACCCACCCTaGTCAGTTCCTGCTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: FMSLCLKAASIPTLQRSGPADPP*SVPAAP Trigger: AGGTGCAGCAGGAACTGAGCAGGGTGGGTCTGCTGG...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | GACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTGGAAGCCACTTGGGCAGGGCTaGCAGGCCGTAGCAAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: DLQKSSNGIIAFLVLGWKPLGQG*QAVASN Trigger: ATTGCTTGCTACGGCCTGGCAGCCCTGCCCAAGTGG...CTTCCAGCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR GCA 90 bp | CTGCTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATACACCTCCGTCTGCATaGTCCACGGCTTTGGTTCGA | + |
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Preference number: 4 (lower is better) Translates to: LLREDTLGFPFPEALEVYTPPSA*STALVR Trigger: TCGAACCAAAGCCGTGGAGCATGCAGACGGAGGTGT...ATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | TCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTCTGTTTCAGGGCTTTaGAGCCGTCTGCGCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: SGDLQKSSNGIIAFLVLGSVSGL*SRLRRT Trigger: AGTGCGGCGCAGACGGCTCCAAAGCCCTGAAACAGA...GCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | GCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCCTTCCACGGATGACATaGATCTTCCTGTCTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFASKQLPFPHSKDLGTSLPRMT*IFLSSS Trigger: GCTGCTAGACAGGAAGATCCATGTCATCCGTGGAAG...GGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTCAATGTCTGGACACTTaGCAGCACGAGATCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LHSVLPQVKALEPAGKAGQCLDT*QHEISL Trigger: TAGAGAGATCTCGTGCTGCCAAGTGTCCAGACATTG...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGAGACAAGCTCCCCTCCCAGCCAGCTGTATaGCAATGTCTGGACACTTGG | + |
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Preference number: 4 (lower is better) Translates to: LGFPFPEALEVYGRDKLPSQPAV*QCLDTW Trigger: CCAAGTGTCCAGACATTGCCATACAGCTGGCTGGGA...GGGGAGCTTGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGAGCCTCAGCAATGGCCTaGTCCCCTTCTTCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: REDTLGFPFPEALEVYGRASAMA*SPSSPM Trigger: CATGGGTGAAGAAGGGGACCAGGCCATTGCTGAGGC...TCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTGGAAGGCTGCTGAGATACACTGGACCACTTaGGCAGGGCTGCCAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSNGIIAFLVLGWKAAEIHWTT*AGLPGR Trigger: ACGGCCTGGCAGCCCTGCCCAAGTGGTCCAGTGTAT...CTCAGCAGCCTTCCAGCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | TATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGAAGCTCCGAGATACACTaGACCACTTGGGCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YEPLPQSSFHSHTPKIWGSSEIH*TTWAGL Trigger: CAGCCCTGCCCAAGTGGTCCAGTGTATCTCGGAGCT...TCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCAGGCTGGGTTCTGGCTaGCAGCATCCACCAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SGDLQKSSNGIIAFLVLGRLGSG*QHPPVC Trigger: ACATACTGGTGGATGCTGTCAGCCAGAACCCAGCCT...GCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGAGACAAGCTCCCCCTGGAACATGTAATCTaGGCGATTCAGGCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGFPFPEALEVYGRDKLPLEHVI*AIQAQE Trigger: TTCCTGGGCCTGAATCGCTCAGATTACATGTTCCAG...GGGGAGCTTGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCGCCCTGTCTATGGCCTaGTTTGCCAGTTCTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGDLQKSSNGIIAFLVLGALSMA*FASSSS Trigger: GCTCGAAGAACTGGCAAAGCAGGCCATAGACAGGGC...GCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079691.13 |
||
| CDS-3UTR GCA 90 bp | CTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGAGACAAGCTCCCCTTGGTTCGAAGCAGGTaGCCCACATGCTTGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LGFPFPEALEVYGRDKLPLVRSR*PTCLFI Trigger: GATGAACAAGCATGTGGGGCACCTGCTTCGAACCAA...GGGGAGCTTGTCTCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | TATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGATTGCTCCAGGAAGGCTaGGTTCTGGCTGACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: YEPLPQSSFHSHTPKIWGLLQEG*VLADSI Trigger: GATGCTGTCAGCCAGAACCCAGCCTTCCTGGAGCAA...TCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGAGGCTGGGTTCTGGCTaGCAGCATCCACCAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: FMSLCLKAASIPTLQRSGRLGSG*QHPPVC Trigger: ACATACTGGTGGATGCTGTCAGCCAGAACCCAGCCT...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGAACCCTGCTCAGTTCCTaGTGCACCTTCTTAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: REDTLGFPFPEALEVYGRTLLSS*CTFLVP Trigger: TGGGACTAAGAAGGTGCAGCAGGAACTGAGCAGGGT...TCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGCAGGTGCCCCACATaGTTGTTCATCACCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LREDTLGFPFPEALEVYGSRCPT*LFITSV Trigger: AACACTGGTGATGAACAAGCATGTGGGGCACCTGCT...TCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGAGGAAGGCTGGGTTCTaGCTGACAGCATCCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FMSLCLKAASIPTLQRSGRKAGF*LTASTS Trigger: ACTGGTGGATGCTGTCAGCCAGAACCCAGCCTTCCT...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAAGTCCTTGCTGGGGTTATTaGACAGGATCTTGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASKQLPFPHSKDLGTSRSPCWGY*TGSWKL Trigger: AAGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGG...ACTTCTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAAGTAACAGCCTTCGGTTTTaGTCCAGAGAACCCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASKQLPFPHSKDLGTSRSNSLRF*SREPLS Trigger: TGAAAGGGGTTCTCTGGACCAAAACCGAAGGCTGTT...ACTTCTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCACCACAGCAACTTCCTaGTCATCCATAAACAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AFASKQLPFPHSKDLGTSTTATS*SSINSL Trigger: AAGGCTGTTTATGGATGACCAGGAAGTTGCTGTGGT...GGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGATCCCAGCCAGCTGTATaGCAATGTCTGGACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: REDTLGFPFPEALEVYGRSQPAV*QCLDTW Trigger: CCAAGTGTCCAGACATTGCCATACAGCTGGCTGGGA...TCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCAGCTCCGAGATACACTaGACCACTTGGGCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSGDLQKSSNGIIAFLVLSSEIH*TTWAGL Trigger: CAGCCCTGCCCAAGTGGTCCAGTGTATCTCGGAGCT...GAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | TATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACTGGAACATGTAATCTaGGCGATTCAGGCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YEPLPQSSFHSHTPKIWGLEHVI*AIQAQE Trigger: TTCCTGGGCCTGAATCGCTCAGATTACATGTTCCAG...TCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR GCA 90 bp | AAGACCATGAAGACTTGCAGGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATACACCTCCGTCTGCATaGTCCACGGCTTTGGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KTMKTCRVYEPLPQSSFHTPPSA*STALVR Trigger: TCGAACCAAAGCCGTGGAGCATGCAGACGGAGGTGT...ATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCCTGCAAGTCTTCATGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCCCAGGGCCCTGTCTATaGCCTGCTTTGCCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSGDLQKSSNGIIAFLVLPGPCL*PALPVL Trigger: AAGAACTGGCAAAGCAGGCCATAGACAGGGCCCTGG...GAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079691.13 |
||
| CDS-3UTR CCA 90 bp | AGATCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCTTGCTCCAGGAAGGCTaGGTTCTGGCTGACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RSGDLQKSSNGIIAFLVLLLQEG*VLADSI Trigger: GATGCTGTCAGCCAGAACCCAGCCTTCCTGGAGCAA...GAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGACTTCCACGGATGACATaGATCTTCCTGTCTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: REDTLGFPFPEALEVYGRLPRMT*IFLSSS Trigger: GCTGCTAGACAGGAAGATCCATGTCATCCGTGGAAG...TCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | TATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGATTCCTTTCCTTCTCTTaGGCAATCAGTAGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: YEPLPQSSFHSHTPKIWGFLSFS*AISSTT Trigger: GGTGGTGCTACTGATTGCTCAAGAGAAGGAAAGGAA...TCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGACAAATCTTCCACGGATaGCATGGATCTTCCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LREDTLGFPFPEALEVYGQIFHG*HGSSCL Trigger: TAGACAGGAAGATCCATGTCATCCGTGGAAGATTTG...TCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGTCTATGGCCTGCTTTaGCAGTTCTTCGAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFMSLCLKAASIPTLQRSVYGLL*QFFELL Trigger: AAGCAGCTCGAAGAACTGGCAAAGCAGGCCATAGAC...AGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079691.13 |
||
| CDS-3UTR CCA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTTATTGGACAGGATCTTaGAAGCTTCTTTGGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHSVLPQVKALEPAGKAGYWTGS*KLLWSY Trigger: ATAAGACCAAAGAAGCTTCCAAGATCCTGTCCAATA...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGACCTTGCTGGGGTTATTaGACAGGATCTTGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: REDTLGFPFPEALEVYGRPCWGY*TGSWKL Trigger: AAGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGG...TCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATTTCTCTACGGCACGCTaGTCAAATATGTTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLREDTLGFPFPEALEVYFSTAR*SNMFLS Trigger: GGAAAGGAACATATTTGACCAGCGTGCCGTAGAGAA...ATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGTGAATTATACTGACTaGGCATGTAGCCATCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLREDTLGFPFPEALEVYVNYTD*ACSHLG Trigger: TCCGAGATGGCTACATGCCCAGTCAGTATAATTCAC...ATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| 3UTR CAA 72 bp | GAGAAGACCATGAAGACTTGCAGGGTTTATGAGCCTTaGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKTMKTCRVYEP*PQSSFHSHTPK Trigger: CTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCCTGCAAGTCTTCATGGTCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTCATCCACCAGTATGTTaGAGTCCATCTGCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFMSLCLKAASIPTLQRSHPPVC*SPSAQH Trigger: ATGCTGTGCAGATGGACTTCAACATACTGGTGGATG...AGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079691.13 |
||
| CDS-3UTR TCA 90 bp | GACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTGGAAGTTCCTTTCCTTCTCTTaGGCAATCAGTAGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: DLQKSSNGIIAFLVLGWKFLSFS*AISSTT Trigger: GGTGGTGCTACTGATTGCTCAAGAGAAGGAAAGGAA...CTTCCAGCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCCAAATCTTCCACGGATaGCATGGATCTTCCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SGDLQKSSNGIIAFLVLGQIFHG*HGSSCL Trigger: TAGACAGGAAGATCCATGTCATCCGTGGAAGATTTG...GCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGAACAGCCTTCGGTTTTaGTCCAGAGAACCCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FMSLCLKAASIPTLQRSGNSLRF*SREPLS Trigger: TGAAAGGGGTTCTCTGGACCAAAACCGAAGGCTGTT...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTCAATGTCTGGACACTTaGCAGCACGAGATCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GFMSLCLKAASIPTLQRSQCLDT*QHEISL Trigger: TAGAGAGATCTCGTGCTGCCAAGTGTCCAGACATTG...AGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCCTGTATGGCAATGTCTaGACACTTGGCAGCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSGDLQKSSNGIIAFLVLLYGNV*TLGSTR Trigger: TCTCGTGCTGCCAAGTGTCCAGACATTGCCATACAG...GAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCGTGTTGTTCCCTGTCTaGCATAGACTCCAAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SGDLQKSSNGIIAFLVLGVLFPV*HRLQKY Trigger: GTATTTTTGGAGTCTATGTCAGACAGGGAACAACAC...GCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAAGTTATTGGACAGGATCTTaGAAGCTTCTTTGGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASKQLPFPHSKDLGTSRSYWTGS*KLLWSY Trigger: ATAAGACCAAAGAAGCTTCCAAGATCCTGTCCAATA...ACTTCTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | GACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTGGAAGACCACAGCAACTTCCTaGTCATCCATAAACAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLQKSSNGIIAFLVLGWKTTATS*SSINSL Trigger: AAGGCTGTTTATGGATGACCAGGAAGTTGCTGTGGT...CTTCCAGCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | GACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTGGAAGGTGAATTATACTGACTaGGCATGTAGCCATCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLQKSSNGIIAFLVLGWKVNYTD*ACSHLG Trigger: TCCGAGATGGCTACATGCCCAGTCAGTATAATTCAC...CTTCCAGCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTGGAAGGTGTTGTTCCCTGTCTaGCATAGACTCCAAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: DLQKSSNGIIAFLVLGWKVLFPV*HRLQKY Trigger: GTATTTTTGGAGTCTATGTCAGACAGGGAACAACAC...CTTCCAGCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CCA 90 bp | AAGACCATGAAGACTTGCAGGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTTCTCTACGGCACGCTaGTCAAATATGTTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTMKTCRVYEPLPQSSFHFSTAR*SNMFLS Trigger: GGAAAGGAACATATTTGACCAGCGTGCCGTAGAGAA...ATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCCTGCAAGTCTTCATGGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS GCA 90 bp | AAAAGCGTGAATGGGGCATACGTCACCACGTCGGAGGAGCTGGGATaGTGTGCGGACCTCAGCAACACGCCCTCGGCCAGGGCCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KSVNGAYVTTSEELG*CADLSNTPSARALS Trigger: AGACAGGGCCCTGGCCGAGGGCGTGTTGCTGAGGTCCGCACAGCATCCCAGCTCCTCCGACGTGGTGACGTATGCCCCATTCACGCTTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000155347.2 |
||
| CDS GCA 90 bp | GCGGACCTCAGCAACACGCCCTCGGCCAGGGCCCTGTCTATGGCCTaGTTTGCCAGTTCTTCGAGCTGCTTCTCATCCTGCAAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ADLSNTPSARALSMA*FASSSSCFSSCKML Trigger: CAGCATCTTGCAGGATGAGAAGCAGCTCGAAGAACTGGCAAAGCAGGCCATAGACAGGGCCCTGGCCGAGGGCGTGTTGCTGAGGTCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000155347.2 |
||
| CDS GCA 90 bp | TGGCCCGGGAGCAGCGCTTCCAGCAGACCCACCCTGCTCAGTTCCTaGTGCACCTTCTTAGTCCCAGCCAGCTGTATGGCAATGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WPGSSASSRPTLLSS*CTFLVPASCMAMSG Trigger: TCCAGACATTGCCATACAGCTGGCTGGGACTAAGAAGGTGCAGCAGGAACTGAGCAGGGTGGGTCTGCTGGAAGCGCTGCTCCCGGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS CCA 90 bp | GCTGTGCGGACCTCAGCAACACGCCCTCGGCCAGGGCCCTGTCTATaGCCTGCTTTGCCAGTTCTTCGAGCTGCTTCTCATCCTGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVRTSATRPRPGPCL*PALPVLRAASHPAR Trigger: TCTTGCAGGATGAGAAGCAGCTCGAAGAACTGGCAAAGCAGGCCATAGACAGGGCCCTGGCCGAGGGCGTGTTGCTGAGGTCCGCACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000155347.2 |
||
| CDS-3UTR CAA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTGATACACTGGACCACTaGGGCAGGGCTGCCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LHSVLPQVKALEPAGKAGDTLDH*GRAARP Trigger: CGGCCTGGCAGCCCTGCCCAAGTGGTCCAGTGTATC...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS CCA 90 bp | CTGCCACTCCTGCCGCCACACCTCCGTCTGCATGCTCCACGGCTTTaGTTCGAAGCAGGTGCCCCACATGCTTGTTCATCACCAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPLLPPHLRLHAPRL*FEAGAPHACSSPVL Trigger: CAACACTGGTGATGAACAAGCATGTGGGGCACCTGCTTCGAACCAAAGCCGTGGAGCATGCAGACGGAGGTGTGGCGGCAGGAGTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS TCA 90 bp | TTTCAGGGCTTTGGAGCCGTCTGCGCCGCACTGGAACATGTAATCTaGGCGATTCAGGCCCAGGAACACGGTCTGGGCAATGCCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FQGFGAVCAALEHVI*AIQAQEHGLGNALF Trigger: AAAGAGGGCATTGCCCAGACCGTGTTCCTGGGCCTGAATCGCTCAGATTACATGTTCCAGTGCGGCGCAGACGGCTCCAAAGCCCTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 ENSMUST00000155347.2 |
||
| CDS GCA 90 bp | GCCACACCTCCGTCTGCATGCTCCACGGCTTTGGTTCGAAGCAGGTaGCCCACATGCTTGTTCATCACCAGTGTTGTTCCCTGTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ATPPSACSTALVRSR*PTCLFITSVVPCLT Trigger: TGTCAGACAGGGAACAACACTGGTGATGAACAAGCATGTGGGGCACCTGCTTCGAACCAAAGCCGTGGAGCATGCAGACGGAGGTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGACCCAGGGCCAGTCCCTaGCTGGGGTTATTGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LREDTLGFPFPEALEVYGPRASP*LGLLDR Trigger: CCTGTCCAATAACCCCAGCAAGGGACTGGCCCTGGG...TCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS CCA 90 bp | TATAAGTTGTTACCTCCACCCTCTCTCTGGGGCTTCAGCACAAAGTaGCTAGGAGCAGCAAGGGCCTCAGCAATGGCCTGGTCCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YKLLPPPSLWGFSTK*LGAARASAMAWSPS Trigger: AGAAGGGGACCAGGCCATTGCTGAGGCCCTTGCTGCTCCTAGCCACTTTGTGCTGAAGCCCCAGAGAGAGGGTGGAGGTAACAACTTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS-3UTR CAA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGATACACTGGACCACTaGGGCAGGGCTGCCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FMSLCLKAASIPTLQRSGDTLDH*GRAARP Trigger: CGGCCTGGCAGCCCTGCCCAAGTGGTCCAGTGTATC...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS GCA 90 bp | AGCCATAGAGCTCCCAGGCTTTGGCGATCCCCAGGGCCAGTCCCTTaGTGGGGTTATTGGACAGGATCTTGGAAGCTTCTTTGGTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SHRAPRLWRSPGPVP*WGYWTGSWKLLWSY Trigger: ATAAGACCAAAGAAGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGGGACTGGCCCTGGGGATCGCCAAAGCCTGGGAGCTCTATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGCCCAGGGCCAGTCCCTaGCTGGGGTTATTGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: FMSLCLKAASIPTLQRSGPRASP*LGLLDR Trigger: CCTGTCCAATAACCCCAGCAAGGGACTGGCCCTGGG...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGGACCTCCAGAAGTCAGCTGCTCCAGAGCTaGTACCATTTCCTCCCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASKQLPFPHSKDLGTSRSQLLQS*YHFLPV Trigger: TACGGGGAGGAAATGGTACAAGCTCTGGAGCAGCTG...ACTTCTGGAGGTCCCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS CCA 90 bp | CATAGAGCTCCCAGGCTTTGGCGATCCCCAGGGCCAGTCCCTTGCTaGGGTTATTGGACAGGATCTTGGAAGCTTCTTTGGTCTTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRAPRLWRSPGPVPC*GYWTGSWKLLWSYS Trigger: TGAATAAGACCAAAGAAGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGGGACTGGCCCTGGGGATCGCCAAAGCCTGGGAGCTCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGATCTGTTTCAGGGCTTaGGAGCCGTCTGCGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FMSLCLKAASIPTLQRSGICFRA*EPSAPH Trigger: GTGCGGCGCAGACGGCTCCAAAGCCCTGAAACAGAT...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTCTGGCAGAGATAGTGTaGATCTCGATCTGTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHSVLPQVKALEPAGKAGLAEIV*ISICFR Trigger: CCTGAAACAGATCGAGATCAACACTATCTCTGCCAG...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | AAGACCATGAAGACTTGCAGGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATATCTGTTTCAGGGCTTaGGAGCCGTCTGCGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KTMKTCRVYEPLPQSSFHICFRA*EPSAPH Trigger: GTGCGGCGCAGACGGCTCCAAAGCCCTGAAACAGAT...ATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCCTGCAAGTCTTCATGGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGACCCTTGCTGGGGTTATaGGACAGGATCTTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LREDTLGFPFPEALEVYGPLLGL*DRILEA Trigger: AGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGGG...TCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS TCA 90 bp | GGTCCAGAGAACCCCTTTCAGAGACATCTTCAAATCTTCCACGGATaGCATGGATCTTCCTGTCTAGCAGCTCGTTCTCTACGGCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPENPFQRHLQIFHG*HGSSCLAARSLRHA Trigger: AGCGTGCCGTAGAGAACGAGCTGCTAGACAGGAAGATCCATGTCATCCGTGGAAGATTTGAAGATGTCTCTGAAAGGGGTTCTCTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS TCA 90 bp | GCAGGTGCCCCACATGCTTGTTCATCACCAGTGTTGTTCCCTGTCTaGCATAGACTCCAAAAATACCCAGCTCCGAGATACACTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: AGAPHACSSPVLFPV*HRLQKYPAPRYTGP Trigger: TGGTCCAGTGTATCTCGGAGCTGGGTATTTTTGGAGTCTATGTCAGACAGGGAACAACACTGGTGATGAACAAGCATGTGGGGCACCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS-3UTR CAA 90 bp | AAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCTGGAAGGCTGCTGAGCAGCTGCTCCAGAGCTaGTACCATTTCCTCCCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: KSSNGIIAFLVLGWKAAEQLLQS*YHFLPV Trigger: TACGGGGAGGAAATGGTACAAGCTCTGGAGCAGCTG...CTCAGCAGCCTTCCAGCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS CCA 90 bp | AGAGAACCCCTTTCAGAGACATCTTCAAATCTTCCACGGATGACATaGATCTTCCTGTCTAGCAGCTCGTTCTCTACGGCACGCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: REPLSETSSNLPRMT*IFLSSSSFSTARWS Trigger: TGACCAGCGTGCCGTAGAGAACGAGCTGCTAGACAGGAAGATCCATGTCATCCGTGGAAGATTTGAAGATGTCTCTGAAAGGGGTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS CCA 90 bp | TCTCTAGCATCAGGCGTGCTTCCCAGTTCTGTGAATTATACTGACTaGGCATGTAGCCATCTCGGAAGTACACCACAGCAACTTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLASGVLPSSVNYTD*ACSHLGSTPQQLPG Trigger: ACCAGGAAGTTGCTGTGGTGTACTTCCGAGATGGCTACATGCCCAGTCAGTATAATTCACAGAACTGGGAAGCACGCCTGATGCTAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS-3UTR CAA 90 bp | CTTCACTCGGTCCTACCCCAGGTCAAGGCACTAGAACCTGCTGGAAAGGCTGGTATCTTGGAAGCTTCTTaGGTCTTATTCAGGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: LHSVLPQVKALEPAGKAGILEAS*VLFRTL Trigger: CAATGTCCTGAATAAGACCAAAGAAGCTTCCAAGAT...ACCAGCCTTTCCAGCAGGTTCTAGTGCCTTGACCTGGGGTAGGACCGAGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGCAATGTCTGGACACTaGGCAGCACGAGATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GFMSLCLKAASIPTLQRSAMSGH*AARDLS Trigger: AGAGAGATCTCGTGCTGCCAAGTGTCCAGACATTGC...AGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGCATCCACCAGTATGTaGAAGTCCATCTGCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFMSLCLKAASIPTLQRSASTSM*KSICTA Trigger: TGCTGTGCAGATGGACTTCAACATACTGGTGGATGC...AGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079691.13 |
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| CDS-3UTR CAA 90 bp | AGATCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCCCCTTGCTGGGGTTATaGGACAGGATCTTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSGDLQKSSNGIIAFLVLPLLGL*DRILEA Trigger: AGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGGG...GAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTGGGAAACAGCCTTCGGTTTaGGTCCAGAGAACCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FMSLCLKAASIPTLQRSGKQPSV*VQRTPF Trigger: GAAAGGGGTTCTCTGGACCAAAACCGAAGGCTGTTT...CCCAGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | AAGACCATGAAGACTTGCAGGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATGCAATGTCTGGACACTaGGCAGCACGAGATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KTMKTCRVYEPLPQSSFHAMSGH*AARDLS Trigger: AGAGAGATCTCGTGCTGCCAAGTGTCCAGACATTGC...ATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCCTGCAAGTCTTCATGGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS CCA 90 bp | TACACCACAGCAACTTCCTGGTCATCCATAAACAGCCTTCGGTTTTaGTCCAGAGAACCCCTTTCAGAGACATCTTCAAATCTTCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: YTTATSWSSINSLRF*SREPLSETSSNLPR Trigger: CCGTGGAAGATTTGAAGATGTCTCTGAAAGGGGTTCTCTGGACCAAAACCGAAGGCTGTTTATGGATGACCAGGAAGTTGCTGTGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTTATGAGCCTTTGCCTCAAAGCAGCTTCCATTCCCACACTCCAAAGATCTCTGGCAGAGATAGTGTaGATCTCGATCTGTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GFMSLCLKAASIPTLQRSLAEIV*ISICFR Trigger: CCTGAAACAGATCGAGATCAACACTATCTCTGCCAG...AGATCTTTGGAGTGTGGGAATGGAAGCTGCTTTGAGGCAAAGGCTCATAAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | AGATCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCAAACAGCCTTCGGTTTaGGTCCAGAGAACCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSGDLQKSSNGIIAFLVLKQPSV*VQRTPF Trigger: GAAAGGGGTTCTCTGGACCAAAACCGAAGGCTGTTT...GAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGACCTCCAGAAGTCTTCTAATGGAATCATAGCTTTTCTGGTCCTCGGCATCTTGGAAGCTTCTTaGGTCTTATTCAGGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: SGDLQKSSNGIIAFLVLGILEAS*VLFRTL Trigger: CAATGTCCTGAATAAGACCAAAGAAGCTTCCAAGAT...GCCGAGGACCAGAAAAGCTATGATTCCATTAGAAGACTTCTGGAGGTCCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGATACCCTGGGTTTTCCCTTCCCTGAAGCTTTGGAGGTCTATGGAAGATTATTGGACAGGATCTaGGAAGCTTCTTTGGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: REDTLGFPFPEALEVYGRLLDRI*EASLVL Trigger: TAAGACCAAAGAAGCTTCCAAGATCCTGTCCAATAA...TCTTCCATAGACCTCCAAAGCTTCAGGGAAGGGAAAACCCAGGGTATCTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS GCA 72 bp | GGCATACGTCACCACGTCGGAGGAGCTGGGATGCTGTaGGGACCTCAGCAACACGCCCTCGGCCAGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GIRHHVGGAGML*GPQQHALGQGP Trigger: AGGGCCCTGGCCGAGGGCGTGTTGCTGAGGTCCGCACAGCATCCCAGCTCCTCCGACGTGGTGACGTATGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000155347.2 |
||
| CDS CCA 72 bp | CTTCACCCATGTCCAGTGAATAGAGGCCAGCAAAGGTaGCTCGGAGGCGGGCCACAGCCTCAGGCTGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LHPCPVNRGQQR*LGGGPQPQAGP Trigger: CGGGCCAGCCTGAGGCTGTGGCCCGCCTCCGAGCCACCTTTGCTGGCCTCTATTCACTGGACATGGGTGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
||
| CDS GCA 72 bp | AGGACTGCCACTCCTGCCGCCACACCTCCGTCTGCATaGTCCACGGCTTTGGTTCGAAGCAGGTGCCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RTATPAATPPSA*STALVRSRCPT Trigger: TGTGGGGCACCTGCTTCGAACCAAAGCCGTGGAGCATGCAGACGGAGGTGTGGCGGCAGGAGTGGCAGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS GCA 72 bp | AGCAACACGCCCTCGGCCAGGGCCCTGTCTATGGCCTaGTTTGCCAGTTCTTCGAGCTGCTTCTCATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SNTPSARALSMA*FASSSSCFSSC Trigger: GCAGGATGAGAAGCAGCTCGAAGAACTGGCAAAGCAGGCCATAGACAGGGCCCTGGCCGAGGGCGTGTTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000155347.2 |
||
| CDS CAA 72 bp | CCTGCCGCCACACCTCCGTCTGCATGCTCCACGGCTTaGGTTCGAAGCAGGTGCCCCACATGCTTGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PAATPPSACSTA*VRSRCPTCLFI Trigger: GATGAACAAGCATGTGGGGCACCTGCTTCGAACCAAAGCCGTGGAGCATGCAGACGGAGGTGTGGCGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS CCA 72 bp | TTACCTCCACCCTCTCTCTGGGGCTTCAGCACAAAGTaGCTAGGAGCAGCAAGGGCCTCAGCAATGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPPPSLWGFSTK*LGAARASAMAW Trigger: CCAGGCCATTGCTGAGGCCCTTGCTGCTCCTAGCCACTTTGTGCTGAAGCCCCAGAGAGAGGGTGGAGGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS CCA 72 bp | CTGCCGCCACACCTCCGTCTGCATGCTCCACGGCTTTaGTTCGAAGCAGGTGCCCCACATGCTTGTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LPPHLRLHAPRL*FEAGAPHACSS Trigger: TGATGAACAAGCATGTGGGGCACCTGCTTCGAACCAAAGCCGTGGAGCATGCAGACGGAGGTGTGGCGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS CAA 90 bp | ACTGCCACTCCTGCCGCCACACCTCCGTCTGCATGCTCCACGGCTTaGGTTCGAAGCAGGTGCCCCACATGCTTGTTCATCACCAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TATPAATPPSACSTA*VRSRCPTCLFITSV Trigger: AACACTGGTGATGAACAAGCATGTGGGGCACCTGCTTCGAACCAAAGCCGTGGAGCATGCAGACGGAGGTGTGGCGGCAGGAGTGGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
||
| CDS GCA 72 bp | GCTCCCAGGCTTTGGCGATCCCCAGGGCCAGTCCCTTaGTGGGGTTATTGGACAGGATCTTGGAAGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: APRLWRSPGPVP*WGYWTGSWKLL Trigger: AAGAAGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGGGACTGGCCCTGGGGATCGCCAAAGCCTGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 |
||
| CDS GCA 72 bp | ATGGCCTGGTCCCCTTCTTCACCCCTGCTCAGTTCCTaGTGCACCTTCTTAGTCCCAGCCAGCTGTATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: MAWSPSSPLLSS*CTFLVPASCMA Trigger: TGCCATACAGCTGGCTGGGACTAAGAAGGTGCAGCAGGAACTGAGCAGGGGTGAAGAAGGGGACCAGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175993.2 |
||
| CDS CCA 72 bp | CCCAGGCTTTGGCGATCCCCAGGGCCAGTCCCTTGCTaGGGTTATTGGACAGGATCTTGGAAGCTTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRLWRSPGPVPC*GYWTGSWKLLW Trigger: CCAAAGAAGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGGGACTGGCCCTGGGGATCGCCAAAGCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 |
||
| CDS CAA 72 bp | AGCTCCCAGGCTTTGGCGATCCCCAGGGCCAGTCCCTaGCTGGGGTTATTGGACAGGATCTTGGAAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSQALAIPRASP*LGLLDRILEAS Trigger: AGAAGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGGGACTGGCCCTGGGGATCGCCAAAGCCTGGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 |
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| CDS TCA 72 bp | TTTGGAGCCGTCTGCGCCGCACTGGAACATGTAATCTaGGCGATTCAGGCCCAGGAACACGGTCTGGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: FGAVCAALEHVI*AIQAQEHGLGN Trigger: ATTGCCCAGACCGTGTTCCTGGGCCTGAATCGCTCAGATTACATGTTCCAGTGCGGCGCAGACGGCTCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 ENSMUST00000155347.2 |
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| CDS GCA 72 bp | GCCCTGTCTATGGCCTGCTTTGCCAGTTCTTCGAGCTaGTTCTCATCCTGCAAGATGCTGCCCCAGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: ALSMACFASSSS*FSSCKMLPQLV Trigger: TACCAGCTGGGGCAGCATCTTGCAGGATGAGAAGCAGCTCGAAGAACTGGCAAAGCAGGCCATAGACAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000155347.2 |
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| CDS GCA 72 bp | CCGTCTGCATGCTCCACGGCTTTGGTTCGAAGCAGGTaGCCCACATGCTTGTTCATCACCAGTGTTGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PSACSTALVRSR*PTCLFITSVVP Trigger: GGGAACAACACTGGTGATGAACAAGCATGTGGGGCACCTGCTTCGAACCAAAGCCGTGGAGCATGCAGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS CCA 72 bp | CCAAAAATACCCAGCTCCGAGATACACTGGACCACTTaGGCAGGGCTGCCAGGCCGTAGCAAGCAATTCCTA | + |
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Preference number: 6 (lower is better) Translates to: PKIPSSEIHWTT*AGLPGRSKQFL Trigger: TAGGAATTGCTTGCTACGGCCTGGCAGCCCTGCCCAAGTGGTCCAGTGTATCTCGGAGCTGGGTATTTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS CAA 90 bp | TGCACCTTCTTAGTCCCAGCCAGCTGTATGGCAATGTCTGGACACTaGGCAGCACGAGATCTCTCTAGCATCAGGCGTGCTTCCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: CTFLVPASCMAMSGH*AARDLSSIRRASQF Trigger: GAACTGGGAAGCACGCCTGATGCTAGAGAGATCTCGTGCTGCCAAGTGTCCAGACATTGCCATACAGCTGGCTGGGACTAAGAAGGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS GCA 72 bp | TGCTCCACGGCTTTGGTTCGAAGCAGGTGCCCCACATaGTTGTTCATCACCAGTGTTGTTCCCTGTCTGACA | + |
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Preference number: 6 (lower is better) Translates to: CSTALVRSRCPT*LFITSVVPCLT Trigger: TGTCAGACAGGGAACAACACTGGTGATGAACAAGCATGTGGGGCACCTGCTTCGAACCAAAGCCGTGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS CAA 72 bp | TTAGTCCCAGCCAGCTGTATGGCAATGTCTGGACACTaGGCAGCACGAGATCTCTCTAGCATCAGGCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LVPASCMAMSGH*AARDLSSIRRA Trigger: AGCACGCCTGATGCTAGAGAGATCTCGTGCTGCCAAGTGTCCAGACATTGCCATACAGCTGGCTGGGACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS CAA 72 bp | TTGGCGATCCCCAGGGCCAGTCCCTTGCTGGGGTTATaGGACAGGATCTTGGAAGCTTCTTTGGTCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: LAIPRASPLLGL*DRILEASLVLF Trigger: GAATAAGACCAAAGAAGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGGGACTGGCCCTGGGGATCGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 |
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| CDS CAA 90 bp | GCCAGTCCCTTGCTGGGGTTATTGGACAGGATCTTGGAAGCTTCTTaGGTCTTATTCAGGACATTGAGAACGTGTCGGTGCACAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ASPLLGLLDRILEAS*VLFRTLRTCRCTAG Trigger: TCCAGCTGTGCACCGACACGTTCTCAATGTCCTGAATAAGACCAAAGAAGCTTCCAAGATCCTGTCCAATAACCCCAGCAAGGGACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 |
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| CDS CCA 72 bp | TCAGGCGTGCTTCCCAGTTCTGTGAATTATACTGACTaGGCATGTAGCCATCTCGGAAGTACACCACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SGVLPSSVNYTD*ACSHLGSTPQQ Trigger: TTGCTGTGGTGTACTTCCGAGATGGCTACATGCCCAGTCAGTATAATTCACAGAACTGGGAAGCACGCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS CAA 72 bp | CAGGAACACGGTCTGGGCAATGCCCTCTTTCAGGACTaGCTTGTAGATATCAAAGAGACGGGCAGTATAGTC | + |
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Preference number: 6 (lower is better) Translates to: QEHGLGNALFQD*LVDIKETGSIV Trigger: GACTATACTGCCCGTCTCTTTGATATCTACAAGCAAGTCCTGAAAGAGGGCATTGCCCAGACCGTGTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 ENSMUST00000155347.2 |
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| CDS CAA 90 bp | ATTCAGGCCCAGGAACACGGTCTGGGCAATGCCCTCTTTCAGGACTaGCTTGTAGATATCAAAGAGACGGGCAGTATAGTCGTCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: IQAQEHGLGNALFQD*LVDIKETGSIVVLF Trigger: AAAAAGGACGACTATACTGCCCGTCTCTTTGATATCTACAAGCAAGTCCTGAAAGAGGGCATTGCCCAGACCGTGTTCCTGGGCCTGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079691.13 ENSMUST00000126322.8 ENSMUST00000130881.8 ENSMUST00000155347.2 |
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| CDS CAA 90 bp | GTACACCACAGCAACTTCCTGGTCATCCATAAACAGCCTTCGGTTTaGGTCCAGAGAACCCCTTTCAGAGACATCTTCAAATCTTCCACG | + |
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Preference number: 6 (lower is better) Translates to: VHHSNFLVIHKQPSV*VQRTPFRDIFKSST Trigger: CGTGGAAGATTTGAAGATGTCTCTGAAAGGGGTTCTCTGGACCAAAACCGAAGGCTGTTTATGGATGACCAGGAAGTTGCTGTGGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS TCA 72 bp | CCACATGCTTGTTCATCACCAGTGTTGTTCCCTGTCTaGCATAGACTCCAAAAATACCCAGCTCCGAGATAC | + |
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Preference number: 6 (lower is better) Translates to: PHACSSPVLFPV*HRLQKYPAPRY Trigger: GTATCTCGGAGCTGGGTATTTTTGGAGTCTATGTCAGACAGGGAACAACACTGGTGATGAACAAGCATGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS CCA 72 bp | CTTTCAGAGACATCTTCAAATCTTCCACGGATGACATaGATCTTCCTGTCTAGCAGCTCGTTCTCTACGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSETSSNLPRMT*IFLSSSSFSTA Trigger: TGCCGTAGAGAACGAGCTGCTAGACAGGAAGATCCATGTCATCCGTGGAAGATTTGAAGATGTCTCTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS TCA 72 bp | AACCCCTTTCAGAGACATCTTCAAATCTTCCACGGATaGCATGGATCTTCCTGTCTAGCAGCTCGTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: NPFQRHLQIFHG*HGSSCLAARSL Trigger: TAGAGAACGAGCTGCTAGACAGGAAGATCCATGTCATCCGTGGAAGATTTGAAGATGTCTCTGAAAGGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 |
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| CDS CCA 72 bp | GCAACTTCCTGGTCATCCATAAACAGCCTTCGGTTTTaGTCCAGAGAACCCCTTTCAGAGACATCTTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: ATSWSSINSLRF*SREPLSETSSN Trigger: ATTTGAAGATGTCTCTGAAAGGGGTTCTCTGGACCAAAACCGAAGGCTGTTTATGGATGACCAGGAAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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| CDS CAA 72 bp | AGCAACTTCCTGGTCATCCATAAACAGCCTTCGGTTTaGGTCCAGAGAACCCCTTTCAGAGACATCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SNFLVIHKQPSV*VQRTPFRDIFK Trigger: TTTGAAGATGTCTCTGAAAGGGGTTCTCTGGACCAAAACCGAAGGCTGTTTATGGATGACCAGGAAGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079691.13 ENSMUST00000130881.8 ENSMUST00000175993.2 |
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