Pregenerated sensors for GSPT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062203Ensembl transcript IDs: ENSMUST00000080030.14, ENSMUST00000167571.8
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGTCATCCTTCGAGCTGAAACCACCACACCACAATGCTGCACGTaGTTCATCCAAATCATGGTTAGCAAATTCCAGCTTACAGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: KVILRAETTTPQCCT*FIQIMVSKFQLTVK Trigger: CTTAACTGTAAGCTGGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGGTGGTTTCAGCTCGAAGGATGACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR GCA 90 bp | GGCACAACCTTAGCCCTGTCCTTGAGACACCAACTCATTCATCTTTaGAGTTGGCATTGCATTGTATTTTGGTTTATGACTGGAAATACA | + |
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Preference number: 1 (lower is better) Translates to: GTTLALSLRHQLIHL*SWHCIVFWFMTGNT Trigger: TGTATTTCCAGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAGGGCTAAGGTTGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR CCA 90 bp | CAGTTGGCATTGCATTGTATTTTGGTTTATGACTGGAAATACAGTTaGCTTTTCTTTCTGGAGAACAAGATTACAGGGACGGACCAGACC | + |
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Preference number: 1 (lower is better) Translates to: QLALHCILVYDWKYS*LFFLENKITGTDQT Trigger: GGTCTGGTCCGTCCCTGTAATCTTGTTCTCCAGAAAGAAAAGCCAACTGTATTTCCAGTCATAAACCAAAATACAATGCAATGCCAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR CCA 90 bp | AGACACCAACTCATTCATCTTTGCAGTTGGCATTGCATTGTATTTTaGTTTATGACTGGAAATACAGTTGGCTTTTCTTTCTGGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: RHQLIHLCSWHCIVF*FMTGNTVGFSFWRT Trigger: TGTTCTCCAGAAAGAAAAGCCAACTGTATTTCCAGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCACACCACAATGCTGCACGTGGTTCATCCAAATCATGGTTAGCAAATTCCAGAAATCAAAGGGTTTaGCAGTCTCCCATGCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: PPHHNAARGSSKSWLANSRNQRV*QSPMLY Trigger: GTAAAGCATGGGAGACTGGCAAACCCTTTGATTTCT...GGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR CAA 90 bp | AGGCACAACCTTAGCCCTGTCCTTGAGACACCAACTCATTCATCTTaGCAGTTGGCATTGCATTGTATTTTGGTTTATGACTGGAAATAC | + |
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Preference number: 2 (lower is better) Translates to: RHNLSPVLETPTHSS*QLALHCILVYDWKY Trigger: GTATTTCCAGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAGGGCTAAGGTTGTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR-3UTR GCA 90 bp | CACAATGCTGCACGTGGTTCATCCAAATCATGGTTAGCAAATTCCAGCTTACAGTGTGAAGTAGGCTTTTaGAGTCAATTTTCCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: HNAARGSSKSWLANSSLQCEVGF*SQFSSQ Trigger: CTGTGAGGAAAATTGACTGCAAAAGCCTACTTCACA...CTGTAAGCTGGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR-3UTR CCA 90 bp | GCACATTCCATACAAAGGAGGCCTCTGACAAACCTCTTCTACTTCCCATTCATTTCAGAATCATCTGCCTaGGGGAAAAAGACTAACTAT | + |
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Preference number: 2 (lower is better) Translates to: AHSIQRRPLTNLFYFPFISESSA*GKKTNY Trigger: ATAGTTAGTCTTTTTCCCCCAGGCAGATGATTCTGA...AATGAATGGGAAGTAGAAGAGGTTTGTCAGAGGCCTCCTTTGTATGGAATGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR CAA 90 bp | AACCTTAGCCCTGTCCTTGAGACACCAACTCATTCATCTTTGCAGTaGGCATTGCATTGTATTTTGGTTTATGACTGGAAATACAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: NLSPVLETPTHSSLQ*ALHCILVYDWKYSW Trigger: CCAACTGTATTTCCAGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAGGGCTAAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR-3UTR GCA 90 bp | TGCATTGTATTTTGGTTTATGACTGGAAATACAGTTGGCTTTTCTTTCTGGAGAACCACCACACCACAATaGTGCACGTGGTTCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: CIVFWFMTGNTVGFSFWRTTTPQ*CTWFIQ Trigger: TTGGATGAACCACGTGCAGCATTGTGGTGTGGTGGT...TCTCCAGAAAGAAAAGCCAACTGTATTTCCAGTCATAAACCAAAATACAATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR CAA 90 bp | GAGACACCAACTCATTCATCTTTGCAGTTGGCATTGCATTGTATTTaGGTTTATGACTGGAAATACAGTTGGCTTTTCTTTCTGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: ETPTHSSLQLALHCI*VYDWKYSWLFFLEN Trigger: GTTCTCCAGAAAGAAAAGCCAACTGTATTTCCAGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTGTCTTTTTAACATGTaGAGACACACTCCCACACTC | + |
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Preference number: 2 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWCLFNM*RHTPTL Trigger: GAGTGTGGGAGTGTGTCTGCACATGTTAAAAAGACA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTTGAGACACCAACTCATTCATCTTTGCAGTTGGCATTGCATTGTATTTGGTTCATCCAAATCATaGTTAGCAAATTCCAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LSLRHQLIHLCSWHCIVFGSSKS*LANSSL Trigger: TAAGCTGGAATTTGCTAACCATGATTTGGATGAACC...AAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTGTGAAGTAGGCTTTTaGAGTCAATTTTCCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWCEVGF*SQFSSQ Trigger: CTGTGAGGAAAATTGACTGCAAAAGCCTACTTCACA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| 3UTR-3UTR GCA 90 bp | GTATTTTGGTTTATGACTGGAAATACAGTTGGCTTTTCTTTCTGGAGAACAAGATGTCTTTTTAACATGTaGAGACACACTCCCACACTC | + |
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Preference number: 2 (lower is better) Translates to: VFWFMTGNTVGFSFWRTRCLFNM*RHTPTL Trigger: GAGTGTGGGAGTGTGTCTGCACATGTTAAAAAGACA...TCTTGTTCTCCAGAAAGAAAAGCCAACTGTATTTCCAGTCATAAACCAAAATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR-3UTR GCA 90 bp | CAACTCATTCATCTTTGCAGTTGGCATTGCATTGTATTTTGGTTTATGACTGGAAGCAGTGTTTGTAAATaGTCCATTCAAAGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: QLIHLCSWHCIVFWFMTGSSVCK*SIQSEW Trigger: CCACTCACTTTGAATGGAGCATTTACAAACACTGCT...TCCAGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTCAGAATCATCTGCCTaGGGGAAAAAGACTAACTAT | + |
|
Preference number: 2 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWSESSA*GKKTNY Trigger: ATAGTTAGTCTTTTTCCCCCAGGCAGATGATTCTGA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| 3UTR-3UTR GCA 90 bp | CAACTCATTCATCTTTGCAGTTGGCATTGCATTGTATTTTGGTTTATGACTGGATTCATACTAGATGCATaGAGCTCTGAGAGAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: QLIHLCSWHCIVFWFMTGFILDA*SSERNQ Trigger: TTGATTTCTCTCAGAGCTGCATGCATCTAGTATGAA...TCCAGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR TCA 72 bp | GAACTGACAGGGTTTCATACTAGATGCATGCAGCTCTaGGAGAAATCAAAGGGTTTGCCAGTCTCCCATGCT | + |
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Preference number: 3 (lower is better) Translates to: ELTGFHTRCMQL*EKSKGLPVSHA Trigger: AGCATGGGAGACTGGCAAACCCTTTGATTTCTCTCAGAGCTGCATGCATCTAGTATGAAACCCTGTCAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR GCA 72 bp | GTCATCCTTCGAGCTGAAACCACCACACCACAATGCTaGACGTGGTTCATCCAAATCATGGTTAGCAAATTC | + |
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Preference number: 3 (lower is better) Translates to: VILRAETTTPQC*TWFIQIMVSKF Trigger: GAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGGTGGTTTCAGCTCGAAGGATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR CCA 72 bp | CTTCGAGCTGAAACCACCACACCACAATGCTGCACGTaGTTCATCCAAATCATGGTTAGCAAATTCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: LRAETTTPQCCT*FIQIMVSKFQL Trigger: AAGCTGGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGGTGGTTTCAGCTCGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR GCA 72 bp | AAAGTCATCCTTCGAGCTGAAACCACCACACCACAATaGTGCACGTGGTTCATCCAAATCATGGTTAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: KVILRAETTTPQ*CTWFIQIMVSK Trigger: TTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGGTGGTTTCAGCTCGAAGGATGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR-3UTR CAA 90 bp | GCACATTCCATACAAAGGAGGCCTCTGACAAACCTCTTCTACTTCCCATTCATTTATTTAGTCTTTGGATaGAGAAATGGCCCGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: AHSIQRRPLTNLFYFPFIYLVFG*RNGPKQ Trigger: CTGCTTCGGGCCATTTCTCAATCCAAAGACTAAATA...AATGAATGGGAAGTAGAAGAGGTTTGTCAGAGGCCTCCTTTGTATGGAATGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR CCA 72 bp | TGTACGCAGTTTGTGATGACTAAAATATTTAGTCTTTaGATTGAGAAATGGCCCGAAGCAGCAAGGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: CTQFVMTKIFSL*IEKWPEAARLF Trigger: GAAGAGCCTTGCTGCTTCGGGCCATTTCTCAATCCAAAGACTAAATATTTTAGTCATCACAAACTGCGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR GCA 72 bp | TTAGCCCTGTCCTTGAGACACCAACTCATTCATCTTTaGAGTTGGCATTGCATTGTATTTTGGTTTATGACT | + |
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Preference number: 3 (lower is better) Translates to: LALSLRHQLIHL*SWHCIVFWFMT Trigger: AGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAGGGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR CCA 72 bp | CCACACCACAATGCTGCACGTGGTTCATCCAAATCATaGTTAGCAAATTCCAGCTTACAGTTAAGAAATAAT | + |
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Preference number: 3 (lower is better) Translates to: PHHNAARGSSKS*LANSSLQLRNN Trigger: ATTATTTCTTAACTGTAAGCTGGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR TCA 90 bp | CCACCACACCACAATGCTGCACGTGGTTCATCCAAATCATGGTTAGCAAATTCCTGGCCTTCCATCTCCTaGGGAACCACCCCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PPHHNAARGSSKSWLANSWPSIS*GTTPWL Trigger: GAGCCAGGGGGTGGTTCCTCAGGAGATGGAAGGCCA...GGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGGCGCAGAGTCGCTGCTaGTGCTGCTCCCGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWAQSRC*CCSRRR Trigger: GCGGCGGCGGGAGCAGCAGCAGCAGCGACTCTGCGC...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCGGGCGCAGAGTCGCTaGTGCTGCTGCTCCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWRAQSR*CCCSRR Trigger: GCGGCGGGAGCAGCAGCAGCAGCGACTCTGCGCCCG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | TGCATTGTATTTTGGTTTATGACTGGAAATACAGTTGGCTTTTCTTTCTGGAGAGCGCAGAGTCGCTGCTaGTGCTGCTCCCGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: CIVFWFMTGNTVGFSFWRAQSRC*CCSRRR Trigger: GCGGCGGCGGGAGCAGCAGCAGCAGCGACTCTGCGC...TCTCCAGAAAGAAAAGCCAACTGTATTTCCAGTCATAAACCAAAATACAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | TGCATTGTATTTTGGTTTATGACTGGAAATACAGTTGGCTTTTCTTTCTGGAGACGGGCGCAGAGTCGCTaGTGCTGCTGCTCCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: CIVFWFMTGNTVGFSFWRRAQSR*CCCSRR Trigger: GCGGCGGGAGCAGCAGCAGCAGCGACTCTGCGCCCG...TCTCCAGAAAGAAAAGCCAACTGTATTTCCAGTCATAAACCAAAATACAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TATTTAGTCTTTGGATTGAGAAATGGCCCGAAGCAGCAAGGCTCTTCATCCTTTGCCTCCATATCCGTCTaGTCCCAGCAGTCGGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: YLVFGLRNGPKQQGSSSFASISV*SQQSGA Trigger: TGCGCCCGACTGCTGGGACCAGACGGATATGGAGGC...AAAGGATGAAGAGCCTTGCTGCTTCGGGCCATTTCTCAATCCAAAGACTAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCTGAGGTTCTCACGCTaGGCCTCGGCCACCGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWLRFSR*ASATAA Trigger: GGCCGCGGTGGCCGAGGCCCAGCGTGAGAACCTCAG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | CAACTCATTCATCTTTGCAGTTGGCATTGCATTGTATTTTGGTTTATGACTGGACTGAGGTTCTCACGCTaGGCCTCGGCCACCGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: QLIHLCSWHCIVFWFMTGLRFSR*ASATAA Trigger: GGCCGCGGTGGCCGAGGCCCAGCGTGAGAACCTCAG...TCCAGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTGGCCTTCCATCTCCTaGGGAACCACCCCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWWPSIS*GTTPWL Trigger: GAGCCAGGGGGTGGTTCCTCAGGAGATGGAAGGCCA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGGCCTCCATATCCGTCTaGTCCCAGCAGTCGGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWASISV*SQQSGA Trigger: TGCGCCCGACTGCTGGGACCAGACGGATATGGAGGC...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCAGCGGCGTGGACGTTaGGGACGAAAGGCTTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWQRRGR*GRKAWR Trigger: ACGCCAAGCCTTTCGTCCCCAACGTCCACGCCGCTG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | CCACCACACCACAATGCTGCACGTGGTTCATCCAAATCATGGTTAGCAAATTCCTTTGAGGTTTTCACCTaGAGCTACAGAGTCCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PPHHNAARGSSKSWLANSFEVFT*SYRVRF Trigger: GAAACGGACTCTGTAGCTCCAGGTGAAAACCTCAAA...GGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | CCACCACACCACAATGCTGCACGTGGTTCATCCAAATCATGGTTAGCAAATTCCCTTCATATCTCTCGTTaGTCCAGTTTACCGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: PPHHNAARGSSKSWLANSLHISR*SSLPLD Trigger: ATCCAACGGTAAACTGGAGCAACGAGAGATATGAAG...GGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| 3UTR CAA 72 bp | TTCAAAGAAGCTGTAGGCACAACCTTAGCCCTGTCCTaGAGACACCAACTCATTCATCTTTGCAGTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FKEAVGTTLALS*RHQLIHLCSWH Trigger: ATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAGGGCTAAGGTTGTGCCTACAGCTTCTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR TCA 90 bp | CCACCACACCACAATGCTGCACGTGGTTCATCCAAATCATGGTTAGCAAATTCCCCAAGGACAGAAATCTaGTTGTTCTTTAAGATTCGC | + |
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Preference number: 4 (lower is better) Translates to: PPHHNAARGSSKSWLANSPRTEI*LFFKIR Trigger: GCGAATCTTAAAGAACAATCAGATTTCTGTCCTTGG...GGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTGGTGTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR TCA 90 bp | CTGTCCTTGAGACACCAACTCATTCATCTTTGCAGTTGGCATTGCATTGTATTTTTGTCCTCCAATGGTTaGCTTGCCTGCATCAACATG | + |
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Preference number: 4 (lower is better) Translates to: LSLRHQLIHLCSWHCIVFLSSNG*LACINM Trigger: CATGTTGATGCAGGCAAGTCAACCATTGGAGGACAA...AAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | ATCTTAGGAATCATAATGGACAATCACAATGAGGCCATTCTCACAAATGGAAGCTTACATGTTCCTTCTTaGGAGCACCTGGTGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ILGIIMDNHNEAILTNGSLHVPS*EHLVVP Trigger: TGGCACCACCAGGTGCTCCCAAGAAGGAACATGTAA...GCTTCCATTTGTGAGAATGGCCTCATTGTGATTGTCCATTATGATTCCTAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCGCTCCTGTCAGTCCTaGGCACGGCATAAAATGAAT | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWRSCQS*ARHKMN Trigger: ATTCATTTTATGCCGTGCTCAGGACTGACAGGAGCG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCCATCATTTCTTGGGTaGTTTCCTCTGGTGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWPSFLG*FPLVAF Trigger: GAAGGCCACCAGAGGAAAGCACCCAAGAAATGATGG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTTACATGTTCCTTCTTaGGAGCACCTGGTGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWLHVPS*EHLVVP Trigger: TGGCACCACCAGGTGCTCCCAAGAAGGAACATGTAA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | CACAATGCTGCACGTGGTTCATCCAAATCATGGTTAGCAAATTCCAGCTTACAGACAAAGGATGAATCCTaGAAGAATCTCTTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HNAARGSSKSWLANSSLQTKDES*KNLFLF Trigger: GAAGAGGAAGAGATTCTTCCAGGATTCATCCTTTGT...CTGTAAGCTGGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTTGTCCTCCAATGGTTaGCTTGCCTGCATCAACATG | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWLSSNG*LACINM Trigger: CATGTTGATGCAGGCAAGTCAACCATTGGAGGACAA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | TATTTAGTCTTTGGATTGAGAAATGGCCCGAAGCAGCAAGGCTCTTCATCCTTTTCTGAGCATCAAATGTaGGTCCAGAATGACAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: YLVFGLRNGPKQQGSSSFSEHQM*VQNDKD Trigger: ATCTTTGTCATTCTGGACGCACATTTGATGCTCAGA...AAAGGATGAAGAGCCTTGCTGCTTCGGGCCATTTCTCAATCCAAAGACTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTTTGAGGTTTTCACCTaGAGCTACAGAGTCCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWFEVFT*SYRVRF Trigger: GAAACGGACTCTGTAGCTCCAGGTGAAAACCTCAAA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| 3UTR CAA 72 bp | CCTGTCCTTGAGACACCAACTCATTCATCTTTGCAGTaGGCATTGCATTGTATTTTGGTTTATGACTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PVLETPTHSSLQ*ALHCILVYDWK Trigger: TTTCCAGTCATAAACCAAAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCTTCATATCTCTCGTTaGTCCAGTTTACCGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWLHISR*SSLPLD Trigger: ATCCAACGGTAAACTGGAGCAACGAGAGATATGAAG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCTTGAGACACCAACTCATTCATCTTTGCAGTTGGCATTGCATTGTATTTAGAACTTCCACGTTGTaGTTATTTGGCATCATTACA | + |
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Preference number: 4 (lower is better) Translates to: LSLRHQLIHLCSWHCIVFRTSTL*LFGIIT Trigger: TGTAATGATGCCAAATAAGCACAACGTGGAAGTTCT...AAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCACGTTGTGCTTATTTaGCATCATTACAAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWHVVLI*HHYKLL Trigger: CAGCAGCTTGTAATGATGCCAAATAAGCACAACGTG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | CTGTCCTTGAGACACCAACTCATTCATCTTTGCAGTTGGCATTGCATTGTATTTCTTTTCCAATTGCAATaGTCTTACCCTCATCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LSLRHQLIHLCSWHCIVFLFQLQ*SYPHLL Trigger: TAAGAGATGAGGGTAAGACCATTGCAATTGGAAAAG...AAATACAATGCAATGCCAACTGCAAAGATGAATGAGTTGGTGTCTCAAGGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCCAAGGACAGAAATCTaGTTGTTCTTTAAGATTCGC | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWPRTEI*LFFKIR Trigger: GCGAATCTTAAAGAACAATCAGATTTCTGTCCTTGG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTCTGAGCATCAAATGTaGGTCCAGAATGACAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWSEHQM*VQNDKD Trigger: ATCTTTGTCATTCTGGACGCACATTTGATGCTCAGA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TGCATTGTATTTTGGTTTATGACTGGAAATACAGTTGGCTTTTCTTTCTGGAGACACGTTGTGCTTATTTaGCATCATTACAAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CIVFWFMTGNTVGFSFWRHVVLI*HHYKLL Trigger: CAGCAGCTTGTAATGATGCCAAATAAGCACAACGTG...TCTCCAGAAAGAAAAGCCAACTGTATTTCCAGTCATAAACCAAAATACAATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGACAAAGGATGAATCCTaGAAGAATCTCTTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWTKDES*KNLFLF Trigger: GAAGAGGAAGAGATTCTTCCAGGATTCATCCTTTGT...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGAGAACTTCCACGTTGTaGTTATTTGGCATCATTACA | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWRTSTL*LFGIIT Trigger: TGTAATGATGCCAAATAAGCACAACGTGGAAGTTCT...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCTTTTCCAATTGCAATaGTCTTACCCTCATCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWLFQLQ*SYPHLL Trigger: TAAGAGATGAGGGTAAGACCATTGCAATTGGAAAAG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS GCA 90 bp | GGTCTTGAGAGGACTCTACAGGTTCCGAAGGGCCTCCCGCGCCGCTaGCTGCTCCGTGGTCGCCTCCGGCTGCGCCAGCTGGGGATAGCG | + |
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Preference number: 5 (lower is better) Translates to: GLERTLQVPKGLPRR*LLRGRLRLRQLGIA Trigger: CGCTATCCCCAGCTGGCGCAGCCGGAGGCGACCACGGAGCAGGCAGCGGCGCGGGAGGCCCTTCGGAACCTGTAGAGTCCTCTCAAGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS TCA 90 bp | AGTTCCATGCTAACAGTAGAATTTGAACCTTCACACGACTGGTCTTaGGAGGACTCTACAGGTTCCGAAGGGCCTCCCGCGCCGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: SSMLTVEFEPSHDWS*EDSTGSEGPPAPLP Trigger: AGGCAGCGGCGCGGGAGGCCCTTCGGAACCTGTAGAGTCCTCTCAAGACCAGTCGTGTGAAGGTTCAAATTCTACTGTTAGCATGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TATTTAGTCTTTGGATTGAGAAATGGCCCGAAGCAGCAAGGCTCTTCATCCTTTTCAGCGGCGTGGACGTaGGGGACGAAAGGCTTGGCG | + |
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Preference number: 5 (lower is better) Translates to: YLVFGLRNGPKQQGSSSFSAAWT*GTKGLA Trigger: CGCCAAGCCTTTCGTCCCCAACGTCCACGCCGCTGA...AAAGGATGAAGAGCCTTGCTGCTTCGGGCCATTTCTCAATCCAAAGACTAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | CACAATGCTGCACGTGGTTCATCCAAATCATGGTTAGCAAATTCCAGCTTACAGACGAAAGGCTTGGCGTaGACGTTGAGTTGCCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HNAARGSSKSWLANSSLQTKGLA*TLSCRL Trigger: CAGCCGGCAACTCAACGTCAACGCCAAGCCTTTCGT...CTGTAAGCTGGAATTTGCTAACCATGATTTGGATGAACCACGTGCAGCATTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTCAGCGGCGTGGACGTaGGGGACGAAAGGCTTGGCG | + |
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Preference number: 5 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWSAAWT*GTKGLA Trigger: CGCCAAGCCTTTCGTCCCCAACGTCCACGCCGCTGA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TATTTAGTCTTTGGATTGAGAAATGGCCCGAAGCAGCAAGGCTCTTCATCCTTTCTCCTCCATCATTTCTaGGGTGCTTTCCTCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: YLVFGLRNGPKQQGSSSFLLHHF*GAFLWW Trigger: CCACCAGAGGAAAGCACCCAAGAAATGATGGAGGAG...AAAGGATGAAGAGCCTTGCTGCTTCGGGCCATTTCTCAATCCAAAGACTAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGACGAAAGGCTTGGCGTaGACGTTGAGTTGCCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWTKGLA*TLSCRL Trigger: CAGCCGGCAACTCAACGTCAACGCCAAGCCTTTCGT...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | GCACATTCCATACAAAGGAGGCCTCTGACAAACCTCTTCTACTTCCCATTCATTCCACGTTGTGCTTATTaGGCATCATTACAAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: AHSIQRRPLTNLFYFPFIPRCAY*ASLQAA Trigger: AGCAGCTTGTAATGATGCCAAATAAGCACAACGTGG...AATGAATGGGAAGTAGAAGAGGTTTGTCAGAGGCCTCCTTTGTATGGAATGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCTCCTCCATCATTTCTaGGGTGCTTTCCTCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWLLHHF*GAFLWW Trigger: CCACCAGAGGAAAGCACCCAAGAAATGATGGAGGAG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCCTCCAATGGTTGACTaGCCTGCATCAACATGTCCG | + |
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Preference number: 5 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWPPMVD*PASTCP Trigger: CGGACATGTTGATGCAGGCAAGTCAACCATTGGAGG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTTCACACGACTGGTCTaGAGAGGACTCTACAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWFTRLV*RGLYRF Trigger: GAACCTGTAGAGTCCTCTCAAGACCAGTCGTGTGAA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | ATTCTGTACTTGATTCTATTCCTGTTTATGTTAGTGTACGCAGTTTGTGATGACCCTCCAATGGTTGACTaGCCTGCATCAACATGTCCG | + |
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Preference number: 5 (lower is better) Translates to: ILYLILFLFMLVYAVCDDPPMVD*PASTCP Trigger: CGGACATGTTGATGCAGGCAAGTCAACCATTGGAGG...GTCATCACAAACTGCGTACACTAACATAAACAGGAATAGAATCAAGTACAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | ACCTCTTCTACTTCCCATTCATTCTCACAAAAACTTTCAGGCATGATAGCTGTATTTGTCCTCCAATGGTaGACTTGCCTGCATCAACAT | + |
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Preference number: 5 (lower is better) Translates to: TSSTSHSFSQKLSGMIAVFVLQW*TCLHQH Trigger: ATGTTGATGCAGGCAAGTCAACCATTGGAGGACAAA...TACAGCTATCATGCCTGAAAGTTTTTGTGAGAATGAATGGGAAGTAGAAGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGTTTGTCCTCCAATGGTaGACTTGCCTGCATCAACAT | + |
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Preference number: 5 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWFVLQW*TCLHQH Trigger: ATGTTGATGCAGGCAAGTCAACCATTGGAGGACAAA...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCCACGTTGTGCTTATTaGGCATCATTACAAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWPRCAY*ASLQAA Trigger: AGCAGCTTGTAATGATGCCAAATAAGCACAACGTGG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | ACCTCTTCTACTTCCCATTCATTCTCACAAAAACTTTCAGGCATGATAGCTGTACCAAGAACTTCCACGTaGTGCTTATTTGGCATCATT | + |
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Preference number: 5 (lower is better) Translates to: TSSTSHSFSQKLSGMIAVPRTST*CLFGII Trigger: AATGATGCCAAATAAGCACAACGTGGAAGTTCTTGG...TACAGCTATCATGCCTGAAAGTTTTTGTGAGAATGAATGGGAAGTAGAAGAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167571.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTAATACAAACTTGAGCAGTGTTTGTAAATGCTCCATTCAAAGTGAGTGGCCAAGAACTTCCACGTaGTGCTTATTTGGCATCATT | + |
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Preference number: 5 (lower is better) Translates to: SFNTNLSSVCKCSIQSEWPRTST*CLFGII Trigger: AATGATGCCAAATAAGCACAACGTGGAAGTTCTTGG...CCACTCACTTTGAATGGAGCATTTACAAACACTGCTCAAGTTTGTATTAAAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS GCA 72 bp | CTCTACAGGTTCCGAAGGGCCTCCCGCGCCGCTGCCTaGTCCGTGGTCGCCTCCGGCTGCGCCAGCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LYRFRRASRAAA*SVVASGCASWG Trigger: TCCCCAGCTGGCGCAGCCGGAGGCGACCACGGAGCAGGCAGCGGCGCGGGAGGCCCTTCGGAACCTGTAGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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| CDS GCA 72 bp | AGGACTCTACAGGTTCCGAAGGGCCTCCCGCGCCGCTaGCTGCTCCGTGGTCGCCTCCGGCTGCGCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RTLQVPKGLPRR*LLRGRLRLRQL Trigger: CAGCTGGCGCAGCCGGAGGCGACCACGGAGCAGGCAGCGGCGCGGGAGGCCCTTCGGAACCTGTAGAGTCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080030.14 ENSMUST00000167571.8 |
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