Pregenerated sensors for GSKIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044715Ensembl transcript IDs: ENSMUST00000051934.7, ENSMUST00000222284.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTGCACACTGCAGGCAACCAGACATCACACCAGAAAGAGAGCCTaGGGCCGGGCTTCTCTGTGCACCCCACAGGCAACCAGAAATCAC | + |
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Preference number: 1 (lower is better) Translates to: LCTLQATRHHTRKRA*GRASLCTPQATRNH Trigger: GTGATTTCTGGTTGCCTGTGGGGTGCACAGAGAAGCCCGGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTTGCCTGCAGTGTGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 90 bp | GCACACTGCAGGCATCACACCAGACATCACACCAGAAAGAGAGCCTaGGGCTGGGCTTCACTGTGCACACTGCAGGCAACCAGACATCAC | + |
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Preference number: 1 (lower is better) Translates to: AHCRHHTRHHTRKRA*GWASLCTLQATRHH Trigger: GTGATGTCTGGTTGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTGTGATGCCTGCAGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 90 bp | CTGTGCACACTGCAGGCAACCAGAAATCACACCAGAAAGAGAGCCTaGGGCCGGACTTCACTGTGCACACCGCAGGCAACCAGACATCAC | + |
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Preference number: 1 (lower is better) Translates to: LCTLQATRNHTRKRA*GRTSLCTPQATRHH Trigger: GTGATGTCTGGTTGCCTGCGGTGTGCACAGTGAAGTCCGGCCTCAGGCTCTCTTTCTGGTGTGATTTCTGGTTGCCTGCAGTGTGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 90 bp | CTGTGCACACCGCAGGCAACCAGACATCACACCAGAAAGAGAGCCTaGGGCCGGACTTCACTGTGCACACTGCAGGCAACCAGAAATCAC | + |
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Preference number: 1 (lower is better) Translates to: LCTPQATRHHTRKRA*GRTSLCTLQATRNH Trigger: GTGATTTCTGGTTGCCTGCAGTGTGCACAGTGAAGTCCGGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTTGCCTGCGGTGTGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 90 bp | CTGTGCACACTGCAGGCAACCAGACATCACACCAGAAAGAGAGCCTaGGGCAGGGCTTCACTGTGCACACTGCAGGCATCACACCAGACA | + |
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Preference number: 1 (lower is better) Translates to: LCTLQATRHHTRKRA*GRASLCTLQASHQT Trigger: TGTCTGGTGTGATGCCTGCAGTGTGCACAGTGAAGCCCTGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTTGCCTGCAGTGTGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 90 bp | CTGTGCACCCCACAGGCAACCAGAAATCACACCAGAAAGAGAGCCTaGGGCTGGGCTTCACTGTGCACACTGCAGGCATCACACCAGACA | + |
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Preference number: 1 (lower is better) Translates to: LCTPQATRNHTRKRA*GWASLCTLQASHQT Trigger: TGTCTGGTGTGATGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTCTGGTGTGATTTCTGGTTGCCTGTGGGGTGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 90 bp | CTGTGCATACTGCAGGCAACCAGAAATCACACCAGAAAGAGAGCCTaGGGCTGGGCTTCACTGTGCACACTGCAGGCATCACACCAGACA | + |
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Preference number: 1 (lower is better) Translates to: LCILQATRNHTRKRA*GWASLCTLQASHQT Trigger: TGTCTGGTGTGATGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTCTGGTGTGATTTCTGGTTGCCTGCAGTATGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR GCA 90 bp | ACATTCATTTGCGAATGGTCTGTCCGCTCTAGGCTGGCTGGCTGTTaGAAACAAGGAATGGAGAACGATTTCTGTCCCTGCCTTCCATTT | + |
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Preference number: 1 (lower is better) Translates to: TFICEWSVRSRLAGC*KQGMENDFCPCLPF Trigger: AAATGGAAGGCAGGGACAGAAATCGTTCTCCATTCCTTGTTTGCAACAGCCAGCCAGCCTAGAGCGGACAGACCATTCGCAAATGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR CCA 90 bp | CTTACCCACGACAGGCAAGGGCTCTACCCTTCACCTTTCCTCCCATaGTCTTCAGAGGCTAAAAATGCCCTTTGCAAACTAACGACAAAA | + |
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Preference number: 1 (lower is better) Translates to: LTHDRQGLYPSPFLP*SSEAKNALCKLTTK Trigger: TTTTGTCGTTAGTTTGCAAAGGGCATTTTTAGCCTCTGAAGACCATGGGAGGAAAGGTGAAGGGTAGAGCCCTTGCCTGTCGTGGGTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 90 bp | AGAGTGCTGGCAGCATTGAAGCCCTGTAACAGGAGAATGAAGAGCTaGCTAGGGATTGAAATGCAGAGTGCTGGGTGTGAAACTCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: RVLAALKPCNRRMKS*LGIEMQSAGCETQN Trigger: ATTCTGAGTTTCACACCCAGCACTCTGCATTTCAATCCCTAGTCAGCTCTTCATTCTCCTGTTACAGGGCTTCAATGCTGCCAGCACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 90 bp | AGGAAACCAGGATCTTCTTCCTTTGAAGAGATCCACACTGGAGGATaGGGTGGGCCTGTTCCTCTATTTGCTCATGTGCTTAGACATCAT | + |
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Preference number: 1 (lower is better) Translates to: RKPGSSSFEEIHTGG*GGPVPLFAHVLRHH Trigger: ATGATGTCTAAGCACATGAGCAAATAGAGGAACAGGCCCACCTCATCCTCCAGTGTGGATCTCTTCAAAGGAAGAAGATCCTGGTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR GCA 90 bp | TCCACACTGGAGGATGAGGTGGGCCTGTTCCTCTATTTGCTCATGTaGTTAGACATCATGGAGATGAGTAATTGTTACATTCATTTGCGA | + |
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Preference number: 1 (lower is better) Translates to: STLEDEVGLFLYLLM*LDIMEMSNCYIHLR Trigger: TCGCAAATGAATGTAACAATTACTCATCTCCATGATGTCTAAGCACATGAGCAAATAGAGGAACAGGCCCACCTCATCCTCCAGTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 90 bp | TTAAGCAGAGCAGTACATTTCAGAATTTGTGCAGGGGAAACTAGTTaGCAGTTTGTTTCCAATAAGGCCAGGTACAAAATAACCACTACA | + |
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Preference number: 1 (lower is better) Translates to: LSRAVHFRICAGETS*QFVSNKARYKITTT Trigger: TGTAGTGGTTATTTTGTACCTGGCCTTATTGGAAACAAACTGTCAACTAGTTTCCCCTGCACAAATTCTGAAATGTACTGCTCTGCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTGGGTGCTTACCCACGACAGGCAAGGGCTCTACCCTTCACCTTTCCTCAGAGCACTGTCCAACTaGTGGGGAAGAAGGGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: QGWVLTHDRQGLYPSPFLRALSN*WGRRAL Trigger: CAGCGCCCTTCTTCCCCAGCAGTTGGACAGTGCTCT...GAGGAAAGGTGAAGGGTAGAGCCCTTGCCTGTCGTGGGTAAGCACCCAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | GAGCCTGAGGCCGGGCTTCTCTGTGCACCCCACAGGCAACCAGAAATCACACCAGGCTGGGCTTCACTGTaGACACTGCAGGCAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: EPEAGLLCAPHRQPEITPGWASL*TLQATR Trigger: TCTGGTTGCCTGCAGTGTGCACAGTGAAGCCCAGCC...TGGTGTGATTTCTGGTTGCCTGTGGGGTGCACAGAGAAGCCCGGCCTCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | TCACACCAGAAAGAGAGCCTGAGGCTGGGCTTCACTGTGCACACTGCAGGCATCGGCCGGGCTTCACTGTaGACACCGCAGGCAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: SHQKESLRLGFTVHTAGIGRASL*TPQATR Trigger: TCTGGTTGCCTGCGGTGTGCACAGTGAAGCCCGGCC...GATGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTCTGGTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR TCA 90 bp | CAGACATCACACCAGAAAGAGAGCCTGAGGCCGGGCTTCTCTGTGCACCCCACAACCAGAAAGAGAGCCTaGGGCTGGGCTTCACTGTGC | + |
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Preference number: 2 (lower is better) Translates to: QTSHQKESLRPGFSVHPTTRKRA*GWASLC Trigger: GCACAGTGAAGCCCAGCCTCAGGCTCTCTTTCTGGT...TGTGGGGTGCACAGAGAAGCCCGGCCTCAGGCTCTCTTTCTGGTGTGATGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGTGCTTACCCACGACAGGCAAGGGCTCTACCCTTCACCTTTCCTCCCAGAGTGCTGGCAGCATTaGAGCCCTGTAACAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GWVLTHDRQGLYPSPFLPECWQH*SPVTGE Trigger: TTCTCCTGTTACAGGGCTTCAATGCTGCCAGCACTC...TGGGAGGAAAGGTGAAGGGTAGAGCCCTTGCCTGTCGTGGGTAAGCACCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTTCACTGTGCACACTGCAGGCATCACACCAGACATCACACCAGAAAGAGCCCAGATGCAGACGGTaGCAGCTGAGGCAGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: WASLCTLQASHQTSHQKEPRCRR*QLRQLW Trigger: CCAGAGCTGCCTCAGCTGCCACCGTCTGCATCTGGG...CTCTTTCTGGTGTGATGTCTGGTGTGATGCCTGCAGTGTGCACAGTGAAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTGAGGCCGGGCTTCTCTGTGCACCCCACAGGCAACCAGAAATCACACCAATGCGCTTTCTACAGTaGCTGTACGCAAGGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: EPEAGLLCAPHRQPEITPMRFLQ*LYARVS Trigger: TGACACCCTTGCGTACAGTCACTGTAGAAAGCGCAT...TGGTGTGATTTCTGGTTGCCTGTGGGGTGCACAGAGAAGCCCGGCCTCAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | TCACACCAGAAAGAGAGCCTGAGGCCGGGCTTCTCTGTGCACCCCACAGGCAACCTTCACTGTGCACACTaGAGGCAACCAGACATCACA | + |
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Preference number: 2 (lower is better) Translates to: SHQKESLRPGFSVHPTGNLHCAH*RQPDIT Trigger: TGTGATGTCTGGTTGCCTGCAGTGTGCACAGTGAAG...GTTGCCTGTGGGGTGCACAGAGAAGCCCGGCCTCAGGCTCTCTTTCTGGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR TCA 90 bp | TGTGCACACTGCAGGCAACCAGAAATCACACCAGAAAGAGAGCCTGAGGCCGGAATCCACACTGGAGGATaGGGTGGGCCTGTTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: CAHCRQPEITPEREPEAGIHTGG*GGPVPL Trigger: TAGAGGAACAGGCCCACCTCATCCTCCAGTGTGGAT...TCCGGCCTCAGGCTCTCTTTCTGGTGTGATTTCTGGTTGCCTGCAGTGTGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTCACTGTGCACACTGCAGGCATCACACCAGACATCACACCAGAAAGAGAGGCAGGGCTTCACTGTaGACACTGCAGGCATCACAC | + |
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Preference number: 2 (lower is better) Translates to: GLHCAHCRHHTRHHTRKRGRASL*TLQASH Trigger: GTGTGATGCCTGCAGTGTGCACAGTGAAGCCCTGCC...TCTCTTTCTGGTGTGATGTCTGGTGTGATGCCTGCAGTGTGCACAGTGAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCTGGGTGCTTACCCACGACAGGCAAGGGCTCTACCCTTCACCTTTCCTCACATTCATTTGCGAATaGTCTGTCCGCTCTAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QGWVLTHDRQGLYPSPFLTFICE*SVRSRL Trigger: CAGCCTAGAGCGGACAGACCATTCGCAAATGAATGT...GAGGAAAGGTGAAGGGTAGAGCCCTTGCCTGTCGTGGGTAAGCACCCAGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR CCA 90 bp | TCACACCAGAAAGAGAGCCTGAGGCCGGGCTTCTCTGTGCACCCCACAGGCAACTCACCTTTCCTCCCATaGTCTTCAGAGGCTAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SHQKESLRPGFSVHPTGNSPFLP*SSEAKN Trigger: ATTTTTAGCCTCTGAAGACCATGGGAGGAAAGGTGA...GTTGCCTGTGGGGTGCACAGAGAAGCCCGGCCTCAGGCTCTCTTTCTGGTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | TCACACCAGAAAGAGAGCCTGAGGCCGGGCTTCTCTGTGCACCCCACAGGCAACATTGTTACATTCATTTaGGAATGGTCTGTCCGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SHQKESLRPGFSVHPTGNIVTFI*EWSVRS Trigger: AGAGCGGACAGACCATTCGCAAATGAATGTAACAAT...GTTGCCTGTGGGGTGCACAGAGAAGCCCGGCCTCAGGCTCTCTTTCTGGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGTGCTTACCCACGACAGGCAAGGGCTCTACCCTTCACCTTTCCTCCCAAACGATTTCTGTCCCTaGCTTCCATTTTATCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: GWVLTHDRQGLYPSPFLPNDFCP*LPFYLS Trigger: ACTAAGATAAAATGGAAGGCAGGGACAGAAATCGTT...TGGGAGGAAAGGTGAAGGGTAGAGCCCTTGCCTGTCGTGGGTAAGCACCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR TCA 90 bp | ATCACACCAGACATCACACCAGAAAGAGAGCCTGAGGCCGGGCTTCACTGTGCAGCAGGGGAAACTAGTTaGCAGTTTGTTTCCAATAAG | + |
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Preference number: 2 (lower is better) Translates to: ITPDITPEREPEAGLHCAAGETS*QFVSNK Trigger: CTTATTGGAAACAAACTGTCAACTAGTTTCCCCTGC...TGCACAGTGAAGCCCGGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR CAA 90 bp | CACAGGCCAAAATACCGTTTCCTAGGAAACCAGGATCTTCTTCCTTaGAAGAGATCCACACTGGAGGATGAGGTGGGCCTGTTCCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: HRPKYRFLGNQDLLP*KRSTLEDEVGLFLY Trigger: ATAGAGGAACAGGCCCACCTCATCCTCCAGTGTGGATCTCTTCAAAGGAAGAAGATCCTGGTTTCCTAGGAAACGGTATTTTGGCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR CCA 90 bp | AATGCAGAGGGAACTCTACCAAGCCTGGTCCCCAGAAGCATTTTAAGACTGTTTCAGCTGAGGCAGCTCTaGGTGACAACTAGAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: NAEGTLPSLVPRSILRLFQLRQL*VTTRTE Trigger: CTCTGTTCTAGTTGTCACCCAGAGCTGCCTCAGCTG...AAACAGTCTTAAAATGCTTCTGGGGACCAGGCTTGGTAGAGTTCCCTCTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR CAA 90 bp | AGGCAGCTCTGGGTGACAACTAGAACAGAGCCAGGTCCTTTCTGTTaGTCACATACTGGAAAACATGCAGCAGCACGGAGGACTTTATTA | + |
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Preference number: 2 (lower is better) Translates to: RQLWVTTRTEPGPFC*SHTGKHAAARRTLL Trigger: TAATAAAGTCCTCCGTGCTGCTGCATGTTTTCCAGTATGTGACAAACAGAAAGGACCTGGCTCTGTTCTAGTTGTCACCCAGAGCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR TCA 90 bp | CAACACAGGCCAAAATACCGTTTCCTAGGAAACCAGGATCTTCTTCCTTTGAAGGAGCTGACTAGGGATTaGAATGCAGAGTGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: QHRPKYRFLGNQDLLPLKELTRD*NAECWV Trigger: CACCCAGCACTCTGCATTTCAATCCCTAGTCAGCTC...CTTCAAAGGAAGAAGATCCTGGTTTCCTAGGAAACGGTATTTTGGCCTGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | ATCACACCAGACATCACACCAGAAAGAGAGCCTGAGGCCGGGCTTCACTGTGCATTTCGAACCATACAATaGACTCATGTTACACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: ITPDITPEREPEAGLHCAFRTIQ*THVTLF Trigger: GAACAGTGTAACATGAGTGCATTGTATGGTTCGAAA...TGCACAGTGAAGCCCGGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR TCA 90 bp | TTCGAACCATACAATGCACTCATGTTACACTGTTCATGTGGCAATGAGACAGAGGCAGAGTGCTGGGTGTaGAACTCAGAATGGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: FEPYNALMLHCSCGNETEAECWV*NSEWEC Trigger: ACACTCCCATTCTGAGTTTCACACCCAGCACTCTGC...CTCTGTCTCATTGCCACATGAACAGTGTAACATGAGTGCATTGTATGGTTCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTCACTGTGCACACTGCAGGCATCACACCAGACATCACACCAGAAAGAGAGCTAAAAATGCCCTTTaGAAACTAACGACAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: GLHCAHCRHHTRHHTRKRAKNAL*KLTTKT Trigger: TGTTTTTGTCGTTAGTTTGCAAAGGGCATTTTTAGC...TCTCTTTCTGGTGTGATGTCTGGTGTGATGCCTGCAGTGTGCACAGTGAAGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR CAA 90 bp | TTGAAGAGATCCACACTGGAGGATGAGGTGGGCCTGTTCCTCTATTaGCTCATGTGCTTAGACATCATGGAGATGAGTAATTGTTACATT | + |
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Preference number: 2 (lower is better) Translates to: LKRSTLEDEVGLFLY*LMCLDIMEMSNCYI Trigger: AATGTAACAATTACTCATCTCCATGATGTCTAAGCACATGAGCAAATAGAGGAACAGGCCCACCTCATCCTCCAGTGTGGATCTCTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR TCA 90 bp | TTCGAACCATACAATGCACTCATGTTACACTGTTCATGTGGCAATGAGACAGAGCTAGTAGTAAACCCCTaGTTTAGCAGGCTGAATCCA | + |
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Preference number: 2 (lower is better) Translates to: FEPYNALMLHCSCGNETELVVNP*FSRLNP Trigger: TGGATTCAGCCTGCTAAATCAGGGGTTTACTACTAG...CTCTGTCTCATTGCCACATGAACAGTGTAACATGAGTGCATTGTATGGTTCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCATTCATCCTTTGGTTTCGAACCATACAATGCACTCATGTTACACTGTTAGGCTGGCTGGCTGTTaGAAACAAGGAATGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: CFIHPLVSNHTMHSCYTVRLAGC*KQGMEN Trigger: GTTCTCCATTCCTTGTTTGCAACAGCCAGCCAGCCT...AACAGTGTAACATGAGTGCATTGTATGGTTCGAAACCAAAGGATGAATGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR CCA 90 bp | CAACACAGGCCAAAATACCGTTTCCTAGGAAACCAGGATCTTCTTCCTTTGAAGGTTGCAAACAAGGAATaGAGAACGATTTCTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: QHRPKYRFLGNQDLLPLKVANKE*RTISVP Trigger: AGGGACAGAAATCGTTCTCCATTCCTTGTTTGCAAC...CTTCAAAGGAAGAAGATCCTGGTTTCCTAGGAAACGGTATTTTGGCCTGTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR CCA 72 bp | GTGCCCAGATGCAGACGGTGGCAGCTGAGGCAGCTCTaGGTGACAACTAGAACAGAGCCAGGTCCTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: VPRCRRWQLRQL*VTTRTEPGPFC Trigger: ACAGAAAGGACCTGGCTCTGTTCTAGTTGTCACCCAGAGCTGCCTCAGCTGCCACCGTCTGCATCTGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 72 bp | AGGCATCACACCAGACATCACACCAGAAAGAGAGCCTaGGGCTGGGCTTCACTGTGCACACTGCAGGCAACC | + |
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Preference number: 3 (lower is better) Translates to: RHHTRHHTRKRA*GWASLCTLQAT Trigger: GGTTGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTGTGATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 72 bp | CTGCAGGCAACCAGACATCACACCAGAAAGAGAGCCTaGGGCAGGGCTTCACTGTGCACACTGCAGGCATCA | + |
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Preference number: 3 (lower is better) Translates to: LQATRHHTRKRA*GRASLCTLQAS Trigger: TGATGCCTGCAGTGTGCACAGTGAAGCCCTGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTTGCCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 72 bp | CTGCAGGCAACCAGAAATCACACCAGAAAGAGAGCCTaGGGCTGGGCTTCACTGTGCACACTGCAGGCATCA | + |
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Preference number: 3 (lower is better) Translates to: LQATRNHTRKRA*GWASLCTLQAS Trigger: TGATGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTCTGGTGTGATTTCTGGTTGCCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR TCA 72 bp | CCACAGGCAACCAGAAATCACACCAGAAAGAGAGCCTaGGGCTGGGCTTCACTGTGCACACTGCAGGCATCA | + |
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Preference number: 3 (lower is better) Translates to: PQATRNHTRKRA*GWASLCTLQAS Trigger: TGATGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTCTGGTGTGATTTCTGGTTGCCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR GCA 72 bp | GAAAGAGAGCCTGAGGCTGGGCTTCACTGTGCACACTaGAGGCAACCAGACATCACACCAGAAAGAGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: EREPEAGLHCAH*RQPDITPEREP Trigger: AGGCTCTCTTTCTGGTGTGATGTCTGGTTGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR GCA 72 bp | TGCGAATGGTCTGTCCGCTCTAGGCTGGCTGGCTGTTaGAAACAAGGAATGGAGAACGATTTCTGTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: CEWSVRSRLAGC*KQGMENDFCPC Trigger: GCAGGGACAGAAATCGTTCTCCATTCCTTGTTTGCAACAGCCAGCCAGCCTAGAGCGGACAGACCATTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR GCA 72 bp | GAAAGAGAGCCTGAGGCTGGGCTTCACTGTGCACACTaGAGGCATCACACCAGACATCACACCAGAAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EREPEAGLHCAH*RHHTRHHTRKR Trigger: TCTCTTTCTGGTGTGATGTCTGGTGTGATGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR GCA 72 bp | GAAAGAGAGCCTGAGGCCGGACTTCACTGTGCACACTaGAGGCAACCAGAAATCACACCAGAAAGAGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EREPEAGLHCAH*RQPEITPEREP Trigger: AGGCTCTCTTTCTGGTGTGATTTCTGGTTGCCTGCAGTGTGCACAGTGAAGTCCGGCCTCAGGCTCTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGGTGCTTACCCACGACAGGCAAGGGCTCTACCCTTCACCTTTCCTCCCACCAGGTCCTTTCTGTTaGTCACATACTGGAAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: GWVLTHDRQGLYPSPFLPPGPFC*SHTGKH Trigger: ATGTTTTCCAGTATGTGACAAACAGAAAGGACCTGG...TGGGAGGAAAGGTGAAGGGTAGAGCCCTTGCCTGTCGTGGGTAAGCACCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR GCA 72 bp | GAAAGAGAGCCTGAGGCTGGGCTTCACTGTGCACACTaGAGGCAACCAGACATCACACCAGAAAAAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EREPEAGLHCAH*RQPDITPEKES Trigger: AGACTCTTTTTCTGGTGTGATGTCTGGTTGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR CCA 72 bp | AGCATTTTAAGACTGTTTAGATCCTCAGGACAGGGCTaGGTGCTTACCCACGACAGGCAAGGGCTCTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: SILRLFRSSGQG*VLTHDRQGLYP Trigger: AGGGTAGAGCCCTTGCCTGTCGTGGGTAAGCACCCAGCCCTGTCCTGAGGATCTAAACAGTCTTAAAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR-3UTR CAA 90 bp | CCTTTGAAGAGATCCACACTGGAGGATGAGGTGGGCCTGTTCCTCTATTTGCTCAGAGTGCTGGCAGCATaGAAGCCCTGTAACAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLKRSTLEDEVGLFLYLLRVLAA*KPCNRR Trigger: TCTCCTGTTACAGGGCTTCAATGCTGCCAGCACTCT...GAGCAAATAGAGGAACAGGCCCACCTCATCCTCCAGTGTGGATCTCTTCAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR CCA 72 bp | TCCGCTCTAGGCTGGCTGGCTGTTGCAAACAAGGAATaGAGAACGATTTCTGTCCCTGCCTTCCATTTTATC | + |
|
Preference number: 3 (lower is better) Translates to: SALGWLAVANKE*RTISVPAFHFI Trigger: GATAAAATGGAAGGCAGGGACAGAAATCGTTCTCCATTCCTTGTTTGCAACAGCCAGCCAGCCTAGAGCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| 3UTR CCA 72 bp | GACAGGCAAGGGCTCTACCCTTCACCTTTCCTCCCATaGTCTTCAGAGGCTAAAAATGCCCTTTGCAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: DRQGLYPSPFLP*SSEAKNALCKL Trigger: TAGTTTGCAAAGGGCATTTTTAGCCTCTGAAGACCATGGGAGGAAAGGTGAAGGGTAGAGCCCTTGCCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCACACCAGACATCACACCAGAAAGAGAGCCTGAGGCCGGGCTTCACTGTGCAAAACTAGTTGACAGTTaGTTTCCAATAAGGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ITPDITPEREPEAGLHCAKLVDS*FPIRPG Trigger: ACCTGGCCTTATTGGAAACAAACTGTCAACTAGTTT...TGCACAGTGAAGCCCGGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGGCTTCACTGTGCACACTGCAGGCAACCAGACATCACACCAGAAAGAGATGCTTCATTCATCCTTaGGTTTCGAACCATACAATG | + |
|
Preference number: 3 (lower is better) Translates to: GWASLCTLQATRHHTRKRCFIHP*VSNHTM Trigger: CATTGTATGGTTCGAAACCAAAGGATGAATGAAGCA...TCTCTTTCTGGTGTGATGTCTGGTTGCCTGCAGTGTGCACAGTGAAGCCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR TCA 72 bp | CGTGTGAAGGAATGGCGAACACACAAAGCCAATGAATaGTGCGCTTTCTACAGTGACTGTACGCAAGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RVKEWRTHKANE*CAFYSDCTQGC Trigger: ACACCCTTGCGTACAGTCACTGTAGAAAGCGCATCATTCATTGGCTTTGTGTGTTCGCCATTCCTTCACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR TCA 72 bp | GCAGCATTGAAGCCCTGTAACAGGAGAATGAAGAGCTaGCTAGGGATTGAAATGCAGAGTGCTGGGTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: AALKPCNRRMKS*LGIEMQSAGCE Trigger: TTCACACCCAGCACTCTGCATTTCAATCCCTAGTCAGCTCTTCATTCTCCTGTTACAGGGCTTCAATGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR TCA 72 bp | GGATCTTCTTCCTTTGAAGAGATCCACACTGGAGGATaGGGTGGGCCTGTTCCTCTATTTGCTCATGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSSSFEEIHTGG*GGPVPLFAHVL Trigger: AAGCACATGAGCAAATAGAGGAACAGGCCCACCTCATCCTCCAGTGTGGATCTCTTCAAAGGAAGAAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR TCA 72 bp | AAAAAGAGTCTTGTAAAGCCAGGGTCAAACACCCAGTaGACTCTCGGTGGCATTGGCAATGCAGAGGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: KKSLVKPGSNTQ*TLGGIGNAEGT Trigger: AGTTCCCTCTGCATTGCCAATGCCACCGAGAGTTCACTGGGTGTTTGACCCTGGCTTTACAAGACTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR TCA 72 bp | ATACAATGCACTCATGTTACACTGTTCATGTGGCAATaGGACAGAGCACTGTCCAACTGCTGGGGAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IQCTHVTLFMWQ*DRALSNCWGRR Trigger: CCTTCTTCCCCAGCAGTTGGACAGTGCTCTGTCTCATTGCCACATGAACAGTGTAACATGAGTGCATTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR CCA 72 bp | TTACATTCATTTGCGAATGGTCTGTCCGCTCTAGGCTaGCTGGCTGTTGCAAACAAGGAATGGAGAACGATT | + |
|
Preference number: 3 (lower is better) Translates to: LHSFANGLSALG*LAVANKEWRTI Trigger: AATCGTTCTCCATTCCTTGTTTGCAACAGCCAGCCAGCCTAGAGCGGACAGACCATTCGCAAATGAATGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR TCA 72 bp | ACAACTCAATTACGCTGGGAGTCAAAAGCCTGCGTGTaGAGGAATGGCGAACACACAAAGCCAATGAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: TTQLRWESKACV*RNGEHTKPMND Trigger: ATCATTCATTGGCTTTGTGTGTTCGCCATTCCTTCACACGCAGGCTTTTGACTCCCAGCGTAATTGAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR TCA 72 bp | CCACTACAAAGTTACTCCAAGCTAGTAGTAAACCCCTaGTTTAGCAGGCTGAATCCAGGTCTGAAGTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLQSYSKLVVNP*FSRLNPGLKLG Trigger: ACCTAACTTCAGACCTGGATTCAGCCTGCTAAATCAGGGGTTTACTACTAGCTTGGAGTAACTTTGTAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR GCA 72 bp | GCCAGGTCCTTTCTGTTTGTCACATACTGGAAAACATaGAGCAGCACGGAGGACTTTATTACGTTTATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ARSFLFVTYWKT*SSTEDFITFIN Trigger: GTTTATAAACGTAATAAAGTCCTCCGTGCTGCTGCATGTTTTCCAGTATGTGACAAACAGAAAGGACCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCCTGAGGCTGGGCTTCACTGTGCACACTGCAGGCAACCAGACATCACAGCCTCGGCCTCCAGCTaGATGTCCTTCATATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: REPEAGLHCAHCRQPDITASASS*MSFISA Trigger: AGCGGATATGAAGGACATGCAGCTGGAGGCCGAGGC...TGTGATGTCTGGTTGCCTGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR CAA 72 bp | AGCCAGGGTCAAACACCCAGTGAACTCTCGGTGGCATaGGCAATGCAGAGGGAACTCTACCAAGCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGQTPSELSVA*AMQRELYQAWS Trigger: GGACCAGGCTTGGTAGAGTTCCCTCTGCATTGCCAATGCCACCGAGAGTTCACTGGGTGTTTGACCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS-3UTR TCA 90 bp | ACTGTGCACACTGCAGGCAACCAGACATCACACCAGAAAGAGAGCCTGAGGCCGAAAGCTTCCAGTCTCTaGAGGAGCGCGTTTCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVHTAGNQTSHQKESLRPKASSL*RSAFPN Trigger: ATTCGGAAACGCGCTCCTTCAGAGACTGGAAGCTTT...CGGCCTCAGGCTCTCTTTCTGGTGTGATGTCTGGTTGCCTGCAGTGTGCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS-3UTR TCA 90 bp | AATGCAGAGGGAACTCTACCAAGCCTGGTCCCCAGAAGCATTTTAAGACTGTTTCCCGGTAGGCAGGGCTaGGAGTATCCAACAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NAEGTLPSLVPRSILRLFPGRQG*EYPTRS Trigger: ACTCCTTGTTGGATACTCTCAGCCCTGCCTACCGGG...AAACAGTCTTAAAATGCTTCTGGGGACCAGGCTTGGTAGAGTTCCCTCTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS-3UTR GCA 90 bp | CAGACATCACACCAGAAAGAGAGCCTGAGGCTGGGCTTCACTGTGCACACTGCACATCTGCACAGGGCATaGTTTTTGAGACAAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSHQKESLRLGFTVHTAHLHRA*FLRQTC Trigger: ACATGTTTGTCTCAAAAAGCATGCCCTGTGCAGATG...TGCAGTGTGCACAGTGAAGCCCAGCCTCAGGCTCTCTTTCTGGTGTGATGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR CAA 72 bp | TGGGTGACAACTAGAACAGAGCCAGGTCCTTTCTGTTaGTCACATACTGGAAAACATGCAGCAGCACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WVTTRTEPGPFC*SHTGKHAAARR Trigger: CCTCCGTGCTGCTGCATGTTTTCCAGTATGTGACAAACAGAAAGGACCTGGCTCTGTTCTAGTTGTCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| 3UTR CAA 72 bp | AAATACCGTTTCCTAGGAAACCAGGATCTTCTTCCTTaGAAGAGATCCACACTGGAGGATGAGGTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYRFLGNQDLLP*KRSTLEDEVGL Trigger: CAGGCCCACCTCATCCTCCAGTGTGGATCTCTTCAAAGGAAGAAGATCCTGGTTTCCTAGGAAACGGTATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| CDS-3UTR TCA 90 bp | CAGAGCAATGGTCTCAAAATTAAATCCCCTTCCATGAAGCTGAAACTAAGACAACCTTTGTCTCCACATTaGTGTAAGCCACATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSNGLKIKSPSMKLKLRQPLSPH*CKPHHL Trigger: CAGATGATGTGGCTTACATCAATGTGGAGACAAAGG...TTGTCTTAGTTTCAGCTTCATGGAAGGGGATTTAATTTTGAGACCATTGCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS-3UTR TCA 90 bp | AGGTACAAAATAACCACTACAAAGTTACTCCAAGCTAGTAGTAAACCCCTGATTAGACAAACATGTGGTTaGCAGCAAAGAGTACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: RYKITTTKLLQASSKPLIRQTCG*QQRVHR Trigger: ACGATGTACTCTTTGCTGTCAACCACATGTTTGTCT...AATCAGGGGTTTACTACTAGCTTGGAGTAACTTTGTAGTGGTTATTTTGTACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| CDS TCA 90 bp | GTCTCTGAAGGAGCGCGTTTCCGAATGCTTCCCGGTAGGCAGGGCTaGGAGTATCCAACAAGGAGTAGACTGTCTCATGGTAGGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSEGARFRMLPGRQG*EYPTRSRLSHGRGF Trigger: AAACCCCCTACCATGAGACAGTCTACTCCTTGTTGGATACTCTCAGCCCTGCCTACCGGGAAGCATTCGGAAACGCGCTCCTTCAGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
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| CDS-3UTR CAA 90 bp | TGGGCTTCACTGTGCACACTGCAGGCATCACACCAGACATCACACCAGAAAGAGCTCATGGTAGGGGGTTaGCAAATGATCCTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: WASLCTLQASHQTSHQKELMVGG*QMILHL Trigger: CAGGTGGAGGATCATTTGCAAACCCCCTACCATGAG...CTCTTTCTGGTGTGATGTCTGGTGTGATGCCTGCAGTGTGCACAGTGAAGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS GCA 90 bp | ATCTCGTTTCAAAGCTTCCAGTCTCTGAAGGAGCGCGTTTCCGAATaGTTCCCGGTAGGCAGGGCTGAGAGTATCCAACAAGGAGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISFQSFQSLKERVSE*FPVGRAESIQQGVD Trigger: GTCTACTCCTTGTTGGATACTCTCAGCCCTGCCTACCGGGAAGCATTCGGAAACGCGCTCCTTCAGAGACTGGAAGCTTTGAAACGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS GCA 90 bp | TTGACAGCAAAGAGTACATCGTTTACAACTGCCTCGGCCTCCAGCTaGATGTCCTTCATATCCGCTCCTTCAAACCCATTGAGCTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTAKSTSFTTASASS*MSFISAPSNPLSSE Trigger: CTCCGAGCTCAATGGGTTTGAAGGAGCGGATATGAAGGACATGCAGCTGGAGGCCGAGGCAGTTGTAAACGATGTACTCTTTGCTGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051934.7 ENSMUST00000222284.2 |
||
| CDS TCA 90 bp | CCACATCATCTGCACAGGGCATGCTTTTTGAGACAAACATGTGGTTaGCAGCAAAGAGTACATCGTTTACAACTGCCTCGGCCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHHLHRACFLRQTCG*QQRVHRLQLPRPPA Trigger: AGCTGGAGGCCGAGGCAGTTGTAAACGATGTACTCTTTGCTGTCAACCACATGTTTGTCTCAAAAAGCATGCCCTGTGCAGATGATGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051934.7 ENSMUST00000222284.2 |
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| CDS TCA 90 bp | CTCCACATTGATGTAAGCCACATCATCTGCACAGGGCATGCTTTTTaGGACAAACATGTGGTTGACAGCAAAGAGTACATCGTTTACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHIDVSHIICTGHAF*DKHVVDSKEYIVYN Trigger: GTTGTAAACGATGTACTCTTTGCTGTCAACCACATGTTTGTCTCAAAAAGCATGCCCTGTGCAGATGATGTGGCTTACATCAATGTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051934.7 ENSMUST00000222284.2 |
||
| CDS TCA 72 bp | GGAGCGCGTTTCCGAATGCTTCCCGGTAGGCAGGGCTaGGAGTATCCAACAAGGAGTAGACTGTCTCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GARFRMLPGRQG*EYPTRSRLSHG Trigger: ACCATGAGACAGTCTACTCCTTGTTGGATACTCTCAGCCCTGCCTACCGGGAAGCATTCGGAAACGCGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS GCA 72 bp | CACCTGGTCAAAAGCATAGCCCACCACCCTGAGCCCTaGTTCTGTGAGCTCCAGGCAGTATCTGTTCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: HLVKSIAHHPEP*FCELQAVSVPF Trigger: GAAAGGAACAGATACTGCCTGGAGCTCACAGAAGCAGGGCTCAGGGTGGTGGGCTATGCTTTTGACCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS GCA 72 bp | CAAAGCTTCCAGTCTCTGAAGGAGCGCGTTTCCGAATaGTTCCCGGTAGGCAGGGCTGAGAGTATCCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: QSFQSLKERVSE*FPVGRAESIQQ Trigger: TTGTTGGATACTCTCAGCCCTGCCTACCGGGAAGCATTCGGAAACGCGCTCCTTCAGAGACTGGAAGCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051934.7 |
||
| CDS GCA 72 bp | CATGTGGTTGACAGCAAAGAGTACATCGTTTACAACTaGCTCGGCCTCCAGCTGCATGTCCTTCATATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HVVDSKEYIVYN*LGLQLHVLHIR Trigger: GCGGATATGAAGGACATGCAGCTGGAGGCCGAGGCAGTTGTAAACGATGTACTCTTTGCTGTCAACCACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051934.7 ENSMUST00000222284.2 |
||
| CDS CAA 90 bp | GCCACATCATCTGCACAGGGCATGCTTTTTGAGACAAACATGTGGTaGACAGCAAAGAGTACATCGTTTACAACTGCCTCGGCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATSSAQGMLFETNMW*TAKSTSFTTASASS Trigger: GCTGGAGGCCGAGGCAGTTGTAAACGATGTACTCTTTGCTGTCAACCACATGTTTGTCTCAAAAAGCATGCCCTGTGCAGATGATGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051934.7 ENSMUST00000222284.2 |
||
| CDS TCA 72 bp | CTGCACAGGGCATGCTTTTTGAGACAAACATGTGGTTaGCAGCAAAGAGTACATCGTTTACAACTGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LHRACFLRQTCG*QQRVHRLQLPR Trigger: CCGAGGCAGTTGTAAACGATGTACTCTTTGCTGTCAACCACATGTTTGTCTCAAAAAGCATGCCCTGTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051934.7 ENSMUST00000222284.2 |
||
| CDS TCA 72 bp | CCAGGCAGTATCTGTTCCTTTCCTTTGTCTCCACATTaGTGTAAGCCACATCATCTGCACAGGGCATGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PGSICSFPLSPH*CKPHHLHRACF Trigger: AAAGCATGCCCTGTGCAGATGATGTGGCTTACATCAATGTGGAGACAAAGGAAAGGAACAGATACTGCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051934.7 ENSMUST00000222284.2 |
||
| CDS CAA 72 bp | TCTGCACAGGGCATGCTTTTTGAGACAAACATGTGGTaGACAGCAAAGAGTACATCGTTTACAACTGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SAQGMLFETNMW*TAKSTSFTTAS Trigger: CGAGGCAGTTGTAAACGATGTACTCTTTGCTGTCAACCACATGTTTGTCTCAAAAAGCATGCCCTGTGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051934.7 ENSMUST00000222284.2 |
||
| CDS CCA 72 bp | TCATCTGCACAGGGCATGCTTTTTGAGACAAACATGTaGTTGACAGCAAAGAGTACATCGTTTACAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSAQGMLFETNM*LTAKSTSFTTA Trigger: GGCAGTTGTAAACGATGTACTCTTTGCTGTCAACCACATGTTTGTCTCAAAAAGCATGCCCTGTGCAGATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051934.7 ENSMUST00000222284.2 |
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