Pregenerated sensors for GSK3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022812Ensembl transcript IDs: ENSMUST00000023507.13, ENSMUST00000114750.2, ENSMUST00000231437.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCACTCCAGGGCTTGGAGAGGCGATGAACAAACCCATGCCATCTaGCACCCTTCAGCTCTGGGGCCCCCAGCGCTCCACCAAGTCCCG | + |
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Preference number: 1 (lower is better) Translates to: IHSRAWRGDEQTHAI*HPSALGPPALHQVP Trigger: CGGGACTTGGTGGAGCGCTGGGGGCCCCAGAGCTGAAGGGTGTCAGATGGCATGGGTTTGTTCATCGCCTCTCCAAGCCCTGGAGTGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR GCA 90 bp | TGGCCTGCCACCTTCCTGTTCTTCGCTTTCCGATGCACCCAGAGCTaGCCCCTTAACACCATCTCCAGCCTCATCCTAGGGTACCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: WPATFLFFAFRCTQS*PLNTISSLILGYQL Trigger: GAGCTGGTACCCTAGGATGAGGCTGGAGATGGTGTTAAGGGGGCAGCTCTGGGTGCATCGGAAAGCGAAGAACAGGAAGGTGGCAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CCA 90 bp | CCTCTGTCAGAGGAGTGGAGACGGCAGTGTGACTGCATGTGGCGATaGCAGAGTGGGAAGGGTGAAGAGAGGGGGATGGGCACTGAAATA | + |
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Preference number: 1 (lower is better) Translates to: PLSEEWRRQCDCMWR*QSGKGEERGMGTEI Trigger: TATTTCAGTGCCCATCCCCCTCTCTTCACCCTTCCCACTCTGCCATCGCCACATGCAGTCACACTGCCGTCTCCACTCCTCTGACAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR TCA 90 bp | TCGGAAGAATCTCAAGGGAGACCTCTGCCTGGGGCTCTCCTGTGCTaGTGTTTGTTTTCAGCGGCTTCCGTTTCTACCACAAGAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: SEESQGRPLPGALLC*CLFSAASVSTTRDR Trigger: CCTGTCTCTTGTGGTAGAAACGGAAGCCGCTGAAAACAAACATCAGCACAGGAGAGCCCCAGGCAGAGGTCTCCCTTGAGATTCTTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CCA 90 bp | ACAGACTCTGTCGCGCTCTCTCCTTTGGCAGCAGCCTTCCTAAGCTaGCATCTGCAACACCTGCACTGGTCAAGAGCAAAACAAACCTTA | + |
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Preference number: 1 (lower is better) Translates to: TDSVALSPLAAAFLS*HLQHLHWSRAKQTL Trigger: TAAGGTTTGTTTTGCTCTTGACCAGTGCAGGTGTTGCAGATGCCAGCTTAGGAAGGCTGCTGCCAAAGGAGAGAGCGCGACAGAGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR TCA 90 bp | AGGGAAACGACTTTATTAAAATCTGGACAAGCTCACTCACAGTGGTaGGATCTGCCCCTGGCCTGCCACCTTCCTGTTCTTCGCTTTCCG | + |
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Preference number: 1 (lower is better) Translates to: RETTLLKSGQAHSQW*DLPLACHLPVLRFP Trigger: CGGAAAGCGAAGAACAGGAAGGTGGCAGGCCAGGGGCAGATCTCACCACTGTGAGTGAGCTTGTCCAGATTTTAATAAAGTCGTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CCA 90 bp | TGTCTTTCTAGCATCAACTCATTTCGGCAGACAATACAACTCTCTTaGAGAGTTACACACACGGTCGGAGAAGCAAGGCAGGGTGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: CLSSINSFRQTIQLS*RVTHTVGEARQGAR Trigger: CCTAGCACCCTGCCTTGCTTCTCCGACCGTGTGTGTAACTCTCCAAGAGAGTTGTATTGTCTGCCGAAATGAGTTGATGCTAGAAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CCA 90 bp | CCTTTGGCAGCAGCCTTCCTAAGCTGGCATCTGCAACACCTGCACTaGTCAAGAGCAAAACAAACCTTAAGTAATCCATCTCTGATCTTC | + |
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Preference number: 1 (lower is better) Translates to: PLAAAFLSWHLQHLH*SRAKQTLSNPSLIF Trigger: GAAGATCAGAGATGGATTACTTAAGGTTTGTTTTGCTCTTGACCAGTGCAGGTGTTGCAGATGCCAGCTTAGGAAGGCTGCTGCCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR TCA 90 bp | CAGAGACCTGGATCTCACTTGGATAAGAGTTCTGGGATCCTGCCATaGTCCTTGAGAAAGAAAAATCGTGCACCTAAGCCCTCATATATG | + |
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Preference number: 1 (lower is better) Translates to: QRPGSHLDKSSGILP*SLRKKNRAPKPSYM Trigger: CATATATGAGGGCTTAGGTGCACGATTTTTCTTTCTCAAGGATCATGGCAGGATCCCAGAACTCTTATCCAAGTGAGATCCAGGTCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR TCA 90 bp | ACAGTCTGTCATGGGAGAGAAGGTGCATTCTTCTGCCGTGAGCAATaGACTCGTGATGTCTCAAAAATAGCAACCTTTGGTTTGGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: TVCHGREGAFFCREQ*TRDVSKIATFGLVV Trigger: CACTACCAAACCAAAGGTTGCTATTTTTGAGACATCACGAGTTCATTGCTCACGGCAGAAGAATGCACCTTCTCTCCCATGACAGACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CCA 90 bp | CAAAAATCCCAACTCTGGGAGATCTGGCATTGGCCAAACTTTCTCTaGAAGATTCCAAAGTTAAAACCCTTGCAAAGGGAAGAGAAGGTA | + |
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Preference number: 1 (lower is better) Translates to: QKSQLWEIWHWPNFL*KIPKLKPLQREEKV Trigger: TACCTTCTCTTCCCTTTGCAAGGGTTTTAACTTTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCAGATCTCCCAGAGTTGGGATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR GCA 90 bp | TGGATGTGTACAGGCCGAAGTGATCCATCGCAACACATTTATAAATaGAAATTTTACAGGCAAGCACATTTCCATATACCTATCTGTATC | + |
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Preference number: 1 (lower is better) Translates to: WMCTGRSDPSQHIYK*KFYRQAHFHIPICI Trigger: GATACAGATAGGTATATGGAAATGTGCTTGCCTGTAAAATTTGCATTTATAAATGTGTTGCGATGGATCACTTCGGCCTGTACACATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CAA 90 bp | CAAGATCTACCTCAGGGCCCAACAGACTCTGTCGCGCTCTCTCCTTaGGCAGCAGCCTTCCTAAGCTGGCATCTGCAACACCTGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: QDLPQGPTDSVALSP*AAAFLSWHLQHLHW Trigger: CCAGTGCAGGTGTTGCAGATGCCAGCTTAGGAAGGCTGCTGCCAAAGGAGAGAGCGCGACAGAGTCTGTTGGGCCCTGAGGTAGATCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CCA 90 bp | AATGAGCAGACTCACACACGTGTTGGTTACATGGGTGGGACTGACCCAATGTCCACCTCTGCATTGGCGTaGACAAGATGGCCACGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NEQTHTRVGYMGGTDPMSTSALA*TRWPRR Trigger: CCTGCGTGGCCATCTTGTCCACGCCAATGCAGAGGT...GGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CCA 90 bp | AATGAGCAGACTCACACACGTGTTGGTTACATGGGTGGGACTGACCCAATGTCCCACTCAAGTAAGTGCTaGTCTTTCCCGCGCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NEQTHTRVGYMGGTDPMSHSSKC*SFPRSW Trigger: CCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTG...GGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCTGGCCTGCCACCTTCCTGTTCTTCGCTTTCCGATGCACCCAGAGCTGCCGTGAGGCAGGAGTCTaGTTTTTAAGGTATACAATA | + |
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Preference number: 2 (lower is better) Translates to: CPWPATFLFFAFRCTQSCREAGV*FLRYTI Trigger: TATTGTATACCTTAAAAACCAGACTCCTGCCTCACG...GCAGCTCTGGGTGCATCGGAAAGCGAAGAACAGGAAGGTGGCAGGCCAGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR TCA 90 bp | AATCCCAACTCTGGGAGATCTGGCATTGGCCAAACTTTCTCTGGAAGATTCCAAGTTGCGGTGGGGGCGTaGGGCAGGAGTCTGGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: NPNSGRSGIGQTFSGRFQVAVGA*GRSLVF Trigger: AAAAACCAGACTCCTGCCTCACGCCCCCACCGCAAC...TTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCAGATCTCCCAGAGTTGGGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR TCA 90 bp | CTCTCATTTGGGAGGGAAGTAGGTAAGGAGAGAGCAAGCTCGGGAGCTCCCAGACGCACGGCAATTATCTaGGAAGCGCTTTACCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSFGREVGKERASSGAPRRTAII*EALYQK Trigger: CTTTTGGTAAAGCGCTTCTCAGATAATTGCCGTGCG...TCTGGGAGCTCCCGAGCTTGCTCTCTCCTTACCTACTTCCCTCCCAAATGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CCA 90 bp | TCCACAGGGATAGAGAATAGAGGGAGTCCTTTTAGGACCTCTGCATTGGCGTGGATCCACTCCAGGGCTTaGAGAGGCGATGAACAAACC | + |
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Preference number: 2 (lower is better) Translates to: STGIENRGSPFRTSALAWIHSRA*RGDEQT Trigger: GGTTTGTTCATCGCCTCTCCAAGCCCTGGAGTGGAT...CCACGCCAATGCAGAGGTCCTAAAAGGACTCCCTCTATTCTCTATCCCTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR TCA 90 bp | AATGAGCAGACTCACACACGTGTTGGTTACATGGGTGGGACTGACCCAATGTCCCTGGGCAGTTTAATCTaGAAGCAGGTTCCCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: NEQTHTRVGYMGGTDPMSLGSLI*KQVPFS Trigger: TGAGAAGGGAACCTGCTTTCAGATTAAACTGCCCAG...GGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CCA 90 bp | TCCACAGGGATAGAGAATAGAGGGAGTCCTTTTAGGACCTCTGCATTGGCGTGGCTGCAACACCTGCACTaGTCAAGAGCAAAACAAACC | + |
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Preference number: 2 (lower is better) Translates to: STGIENRGSPFRTSALAWLQHLH*SRAKQT Trigger: GGTTTGTTTTGCTCTTGACCAGTGCAGGTGTTGCAG...CCACGCCAATGCAGAGGTCCTAAAAGGACTCCCTCTATTCTCTATCCCTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CAA 90 bp | TCCACAGGGATAGAGAATAGAGGGAGTCCTTTTAGGACCTCTGCATaGGCGTGGACAAGATGGCCACGCAGGTATACTTTGCTAAAACAC | + |
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Preference number: 2 (lower is better) Translates to: STGIENRGSPFRTSA*AWTRWPRRYTLLKH Trigger: GTGTTTTAGCAAAGTATACCTGCGTGGCCATCTTGTCCACGCCAATGCAGAGGTCCTAAAAGGACTCCCTCTATTCTCTATCCCTGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGATTTTAGTGACCTCCCTGGGCTACCAATAATACACCTTGGTTTTTCTCAGGTTTTCTTCTGTTaGGGTGGGGGCGTGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASDFSDLPGLPIIHLGFSQVFFC*GGGVRQ Trigger: CTGCCTCACGCCCCCACCGCAACAGAAGAAAACCTG...AGAAAAACCAAGGTGTATTATTGGTAGCCCAGGGAGGTCACTAAAATCTGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGATTTTAGTGACCTCCCTGGGCTACCAATAATACACCTTGGTTTTTCTTGGCACTCAAGTAAGTaGTGGTCTTTCCCGCGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ASDFSDLPGLPIIHLGFSWHSSK*WSFPRS Trigger: GCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCA...AGAAAAACCAAGGTGTATTATTGGTAGCCCAGGGAGGTCACTAAAATCTGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR TCA 90 bp | TTTACGTCCACAGGGATAGAGAATAGAGGGAGTCCTTTTAGGACCTCTGCATTGACAGAGAAAAGCACCTaGCTTTCCTCCACTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: FTSTGIENRGSPFRTSALTEKST*LSSTLL Trigger: GAGAAGAGTGGAGGAAAGTCAGGTGCTTTTCTCTGT...CAATGCAGAGGTCCTAAAAGGACTCCCTCTATTCTCTATCCCTGTGGACGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR TCA 90 bp | AATGAGCAGACTCACACACGTGTTGGTTACATGGGTGGGACTGACCCAATGTCCTCTATTCAAGACACATaGAGTAGTTGGTGGCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: NEQTHTRVGYMGGTDPMSSIQDT*SSWWQN Trigger: GTTTTGCCACCAACTACTTCATGTGTCTTGAATAGA...GGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CCA 90 bp | AATCCCAACTCTGGGAGATCTGGCATTGGCCAAACTTTCTCTGGAAGATTCCAAGACCTGGATCTCACTTaGATAAGAGTTCTGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: NPNSGRSGIGQTFSGRFQDLDLT*IRVLGS Trigger: GGATCCCAGAACTCTTATCCAAGTGAGATCCAGGTC...TTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCAGATCTCCCAGAGTTGGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CCA 90 bp | AATGAGCAGACTCACACACGTGTTGGTTACATGGGTGGGACTGACCCAATGTCCTCATTTTTGCTTATATaGTGGAGACTGCACAACGGA | + |
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Preference number: 2 (lower is better) Translates to: NEQTHTRVGYMGGTDPMSSFLLI*WRLHNG Trigger: TCCGTTGTGCAGTCTCCACCATATAAGCAAAAATGA...GGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CAA 90 bp | AACATACATTATCCAGTATTGGAAATGAGCAGACTCACACACGTGTaGGTTACATGGGTGGGACTGACCCAATGTCCATGGTGTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: NIHYPVLEMSRLTHV*VTWVGLTQCPWCSW Trigger: CCATGAACACCATGGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATTTCCAATACTGGATAATGTATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CCA 90 bp | AATGAGCAGACTCACACACGTGTTGGTTACATGGGTGGGACTGACCCAATGTCCTGGCCAAACTTTCTCTaGAAGATTCCAAAGTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: NEQTHTRVGYMGGTDPMSWPNFL*KIPKLK Trigger: TTTTAACTTTGGAATCTTCCAGAGAAAGTTTGGCCA...GGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CAA 90 bp | TGGCATTGGCCAAACTTTCTCTGGAAGATTCCAAAGTTAAAACCCTaGCAAAGGGAAGAGAAGGTAACAGAGATGCCAGTGTCTTTACGT | + |
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Preference number: 2 (lower is better) Translates to: WHWPNFLWKIPKLKP*QREEKVTEMPVSLR Trigger: ACGTAAAGACACTGGCATCTCTGTTACCTTCTCTTCCCTTTGCAAGGGTTTTAACTTTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CCA 90 bp | AATCCCAACTCTGGGAGATCTGGCATTGGCCAAACTTTCTCTGGAAGATTCCAACTATGCATAAGAATGTaGCAATTCTTGCAAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: NPNSGRSGIGQTFSGRFQLCIRM*QFLQAW Trigger: CCAAGCTTGCAAGAATTGCCACATTCTTATGCATAG...TTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCAGATCTCCCAGAGTTGGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR GCA 90 bp | CAGCCACACCAAACCATGGACACAGTAACCAAAGACAGCAGCTTATACATGTTTACCAATTTCAAGCTGTaGACTGTATCAAAGTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: QPHQTMDTVTKDSSLYMFTNFKL*TVSKSY Trigger: GTAAGACTTTGATACAGTGCACAGCTTGAAATTGGT...AAACATGTATAAGCTGCTGTCTTTGGTTACTGTGTCCATGGTTTGGTGTGGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR TCA 72 bp | AGGGCTTGGAGAGGCGATGAACAAACCCATGCCATCTaGCACCCTTCAGCTCTGGGGCCCCCAGCGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: RAWRGDEQTHAI*HPSALGPPALH Trigger: GTGGAGCGCTGGGGGCCCCAGAGCTGAAGGGTGTCAGATGGCATGGGTTTGTTCATCGCCTCTCCAAGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CCA 72 bp | GAGGAGTGGAGACGGCAGTGTGACTGCATGTGGCGATaGCAGAGTGGGAAGGGTGAAGAGAGGGGGATGGGC | + |
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Preference number: 3 (lower is better) Translates to: EEWRRQCDCMWR*QSGKGEERGMG Trigger: GCCCATCCCCCTCTCTTCACCCTTCCCACTCTGCCATCGCCACATGCAGTCACACTGCCGTCTCCACTCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR GCA 72 bp | CCCTGGCCTGCCACCTTCCTGTTCTTCGCTTTCCGATaGACCCAGAGCTGCCCCCTTAACACCATCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PWPATFLFFAFR*TQSCPLNTISS Trigger: GCTGGAGATGGTGTTAAGGGGGCAGCTCTGGGTGCATCGGAAAGCGAAGAACAGGAAGGTGGCAGGCCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR GCA 72 bp | TTTCCTCTGTCAGAGGAGTGGAGACGGCAGTGTGACTaGATGTGGCGATGGCAGAGTGGGAAGGGTGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: FPLSEEWRRQCD*MWRWQSGKGEE Trigger: CTCTTCACCCTTCCCACTCTGCCATCGCCACATGCAGTCACACTGCCGTCTCCACTCCTCTGACAGAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR TCA 72 bp | AACAATACCGGGAGAAGCAGGCGGCCTTTGGTCAGGTaGACCAAGATCTACCTCAGGGCCCAACAGACTCTG | + |
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Preference number: 3 (lower is better) Translates to: NNTGRSRRPLVR*TKIYLRAQQTL Trigger: CAGAGTCTGTTGGGCCCTGAGGTAGATCTTGGTTCACCTGACCAAAGGCCGCCTGCTTCTCCCGGTATTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR TCA 72 bp | CGCGCGCGCACACACACACACACAGAGAAAAGCACCTaGCTTTCCTCCACTCTTCTCTTACCCCGTATCTGG | + |
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Preference number: 3 (lower is better) Translates to: RARTHTHTEKST*LSSTLLLPRIW Trigger: CCAGATACGGGGTAAGAGAAGAGTGGAGGAAAGTCAGGTGCTTTTCTCTGTGTGTGTGTGTGTGCGCGCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CCA 72 bp | GTCGCGCTCTCTCCTTTGGCAGCAGCCTTCCTAAGCTaGCATCTGCAACACCTGCACTGGTCAAGAGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: VALSPLAAAFLS*HLQHLHWSRAK Trigger: TTTTGCTCTTGACCAGTGCAGGTGTTGCAGATGCCAGCTTAGGAAGGCTGCTGCCAAAGGAGAGAGCGCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR TCA 72 bp | TGGAGTACTGTCTGTGTCGGGCTGGGCAGTTTAATCTaGAAGCAGGTTCCCTTCTCAGGCCACAGACCTGCT | + |
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Preference number: 3 (lower is better) Translates to: WSTVCVGLGSLI*KQVPFSGHRPA Trigger: AGCAGGTCTGTGGCCTGAGAAGGGAACCTGCTTTCAGATTAAACTGCCCAGCCCGACACAGACAGTACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR GCA 72 bp | TTCCTCTCCCCATTCAAACTGTGGAGTGGGCAAAGGTaGTGTTCTGCTGTTACTCAGAGGGAAAGGGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: FLSPFKLWSGQR*CSAVTQRERGP Trigger: TGGCCCCCTTTCCCTCTGAGTAACAGCAGAACAGCACCTTTGCCCACTCCACAGTTTGAATGGGGAGAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CCA 72 bp | TTCTCTCAAGGATTCATGTTTCCTCTGTCAGAGGAGTaGAGACGGCAGTGTGACTGCATGTGGCGATGGCAG | + |
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Preference number: 3 (lower is better) Translates to: FSQGFMFPLSEE*RRQCDCMWRWQ Trigger: CTGCCATCGCCACATGCAGTCACACTGCCGTCTCCACTCCTCTGACAGAGGAAACATGAATCCTTGAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR GCA 72 bp | CAACGATTGCTTCGGAAGAATCTCAAGGGAGACCTCTaGCTGGGGCTCTCCTGTGCTGATGTTTGTTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: QRLLRKNLKGDL*LGLSCADVCFQ Trigger: CTGAAAACAAACATCAGCACAGGAGAGCCCCAGGCAGAGGTCTCCCTTGAGATTCTTCCGAAGCAATCGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR CCA 72 bp | CCAACATGGTTTCCTCTCCCCATTCAAACTGTGGAGTaGGCAAAGGTGCTGTTCTGCTGTTACTCAGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PTWFPLPIQTVE*AKVLFCCYSEG Trigger: TCCCTCTGAGTAACAGCAGAACAGCACCTTTGCCCACTCCACAGTTTGAATGGGGAGAGGAAACCATGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR-3UTR CAA 90 bp | TCCACAGGGATAGAGAATAGAGGGAGTCCTTTTAGGACCTCTGCATTGGCGTGGAGACCTGGATCTCACTaGGATAAGAGTTCTGGGATC | + |
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Preference number: 3 (lower is better) Translates to: STGIENRGSPFRTSALAWRPGSH*DKSSGI Trigger: GATCCCAGAACTCTTATCCAAGTGAGATCCAGGTCT...CCACGCCAATGCAGAGGTCCTAAAAGGACTCCCTCTATTCTCTATCCCTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR GCA 72 bp | TCTACATTAAGTCCAGGGGGTTTCCAAGCTGGAAGCTaGACCTCCTGTCTACACATCAGAGCAAGGTCATCT | + |
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Preference number: 3 (lower is better) Translates to: STLSPGGFQAGS*TSCLHIRARSS Trigger: AGATGACCTTGCTCTGATGTGTAGACAGGAGGTGCAGCTTCCAGCTTGGAAACCCCCTGGACTTAATGTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| 3UTR TCA 72 bp | TGTTTGCTTTGGGCTTGCTTCCTTTCTTGTCAAGTCTaGTCTAAACGGAGGTCTGAGAAACCCCTTCGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLLWACFLSCQV*SKRRSEKPLRW Trigger: CCACCGAAGGGGTTTCTCAGACCTCCGTTTAGATCAGACTTGACAAGAAAGGAAGCAAGCCCAAAGCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR CCA 72 bp | GTGTTGGTTACATGGGTGGGACTGACCCAATGTCCATaGTGTTCATGGTTTACAAAGACTCCCAACGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLVTWVGLTQCP*CSWFTKTPNDH Trigger: ATGGTCGTTGGGAGTCTTTGTAAACCATGAACACCATGGACATTGGGTCAGTCCCACCCATGTAACCAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR-3UTR CAA 90 bp | AATGAGCAGACTCACACACGTGTTGGTTACATGGGTGGGACTGACCCAATGTCCCCAAAGTTAAAACCCTaGCAAAGGGAAGAGAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: NEQTHTRVGYMGGTDPMSPKLKP*QREEKV Trigger: TACCTTCTCTTCCCTTTGCAAGGGTTTTAACTTTGG...GGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR TCA 72 bp | GGATCTCACTTGGATAAGAGTTCTGGGATCCTGCCATaGTCCTTGAGAAAGAAAAATCGTGCACCTAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GSHLDKSSGILP*SLRKKNRAPKP Trigger: GGGCTTAGGTGCACGATTTTTCTTTCTCAAGGATCATGGCAGGATCCCAGAACTCTTATCCAAGTGAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR TCA 72 bp | ACACACCCAGAACCAAAAACAAAGGCAAGGCTAGAATaGAGTGAGACTGCCAACATGGTTTCCTCTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: THPEPKTKARLE*SETANMVSSPH Trigger: ATGGGGAGAGGAAACCATGTTGGCAGTCTCACTTCATTCTAGCCTTGCCTTTGTTTTTGGTTCTGGGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR CCA 72 bp | AATAGAGGGAGTCCTTTTAGGACCTCTGCATTGGCGTaGACAAGATGGCCACGCAGGTATACTTTGCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NRGSPFRTSALA*TRWPRRYTLLK Trigger: TTTTAGCAAAGTATACCTGCGTGGCCATCTTGTCCACGCCAATGCAGAGGTCCTAAAAGGACTCCCTCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR-3UTR CAA 90 bp | AATCCCAACTCTGGGAGATCTGGCATTGGCCAAACTTTCTCTGGAAGATTCCAAGACAATACAACTCTCTaGGAGAGTTACACACACGGT | + |
|
Preference number: 3 (lower is better) Translates to: NPNSGRSGIGQTFSGRFQDNTTL*ESYTHG Trigger: ACCGTGTGTGTAACTCTCCAAGAGAGTTGTATTGTC...TTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCAGATCTCCCAGAGTTGGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR TCA 72 bp | CATGGGAGAGAAGGTGCATTCTTCTGCCGTGAGCAATaGACTCGTGATGTCTCAAAAATAGCAACCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HGREGAFFCREQ*TRDVSKIATFG Trigger: ACCAAAGGTTGCTATTTTTGAGACATCACGAGTTCATTGCTCACGGCAGAAGAATGCACCTTCTCTCCCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR-3UTR CAA 90 bp | AATCCCAACTCTGGGAGATCTGGCATTGGCCAAACTTTCTCTGGAAGATTCCAAATCCTTCAATCCACCTaGCTTTCCAAGGAATATTGC | + |
|
Preference number: 3 (lower is better) Translates to: NPNSGRSGIGQTFSGRFQILQST*LSKEYC Trigger: GCAATATTCCTTGGAAAGCAAGGTGGATTGAAGGAT...TTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCAGATCTCCCAGAGTTGGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR CCA 72 bp | CAACTCTGGGAGATCTGGCATTGGCCAAACTTTCTCTaGAAGATTCCAAAGTTAAAACCCTTGCAAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLWEIWHWPNFL*KIPKLKPLQRE Trigger: TTCCCTTTGCAAGGGTTTTAACTTTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCAGATCTCCCAGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR CCA 72 bp | CCCCTTATGTACTGGCTGTCATTTTTGCTTATATGGTaGAGACTGCACAACGGAGCAACGGACTTGAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: PLMYWLSFLLIW*RLHNGATDLNK Trigger: TTTATTCAAGTCCGTTGCTCCGTTGTGCAGTCTCCACCATATAAGCAAAAATGACAGCCAGTACATAAGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| 3UTR TCA 72 bp | ACATCAGAGCAAGGTCATCTCAGAGAAGGAGAGTCCTaGTTTTTCTCTCAAGGATTCATGTTTCCTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSEQGHLREGES*FFSQGFMFPLS Trigger: TGACAGAGGAAACATGAATCCTTGAGAGAAAAATCAGGACTCTCCTTCTCTGAGATGACCTTGCTCTGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR TCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGGGTGAAGCAGCGGCCTaGATCCGAGCATGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLGEAAA*IRACGG Trigger: CCCTCCACATGCTCGGATTCAGGCCGCTGCTTCACC...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGCGTTGGCAGGCGGTaGAGCAGCGGCCTGAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWGVGRR*SSGLNP Trigger: CGGATTCAGGCCGCTGCTTCACCGCCTGCCAACGCC...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGGCTGCTGCACTGGCTTaGAGCTCTCCGCAAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLAAALA*SSPQRR Trigger: CCTCCTTTGCGGAGAGCTGCAAGCCAGTGCAGCAGC...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGGCTGCACAGTGCAATTaGCTCTGGTGGAGTTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLAAQCN*LWWSSG Trigger: CCCCGAACTCCACCAGAGGCAATTGCACTGTGCAGC...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGTATCTGAGGCTGCTGTaGCGTTGGCAGGCGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLYLRLL*RWQAVK Trigger: CTTCACCGCCTGCCAACGCCACAGCAGCCTCAGATA...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGTCTCCGCAAAGGAGGTaGTTCTCGGTCGCCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWSPQRR*FSVAPT Trigger: TGTCGGGGCGACCGAGAACCACCTCCTTTGCGGAGA...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGACCCTGGCCAGGAGTTaGCACTACTGTGGTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLTLARS*HYCGYL Trigger: AAGGTAACCACAGTAGTGGCAACTCCTGGCCAGGGT...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGCAGGGAGTGTCTGCTTaGCTCGACTATAGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLQGVSA*LDYSVW Trigger: CCAGACACTATAGTCGAGCCAAGCAGACACTCCCTG...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGTGCAATTGCCTCTGGTaGAGTTCGGGGCCGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWCNCLW*SSGPED Trigger: GTCTTCCGGCCCCGAACTCCACCAGAGGCAATTGCA...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGAAGACCCGCACTCCTaGGGTGAAATGTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWEDPHS*GEMSCS Trigger: GGAGCAGGACATTTCACCCCAGGAGTGCGGGTCTTC...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114750.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGAAAGCTGAAGGCTGCTaGACTGGCTTGCAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLKAEGC*TGLQLS Trigger: GGAGAGCTGCAAGCCAGTGCAGCAGCCTTCAGCTTT...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGCCAAAAGCTGAAGGCTaGTGCACTGGCTTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWPKAEG*CTGLQL Trigger: GAGCTGCAAGCCAGTGCAGCAGCCTTCAGCTTTTGG...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGTCTCCTCGGACCAGCTaGTTTGCACTTCCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLSPRTS*FALPKS Trigger: TGACTTTGGAAGTGCAAAGCAGCTGGTCCGAGGAGA...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGATAACTGACTTCCTGTaGCCTGTCAGGACCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWITDFL*PVRTLA Trigger: GGCCAGGGTCCTGACAGGCCACAGGAAGTCAGTTAT...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGCATGCTACCAAAAGCTaGAGGCTGCTGCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWHATKS*RLLHWL Trigger: AAGCCAGTGCAGCAGCCTTCAGCTTTTGGTAGCATG...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCCAGGCGGCGTTGGCAGGCGGTaGAGCAGCGGCCTGAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSSQPISSCALYQSLTPGGVGRR*SSGLNP Trigger: CGGATTCAGGCCGCTGCTTCACCGCCTGCCAACGCC...GCCTGGCGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR TCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGTGGAGTTGGAAGCTaGTGCAGAAGCGGCGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWGGVGS*CRSGVI Trigger: AATAACGCCGCTTCTGCATCAGCTTCCAACTCCACC...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGATGTCCTGCTCCTGGTaGGTCCTTTGTCCAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWMSCSW*VLCPRM Trigger: CATCCTTGGACAAAGGACTCACCAGGAGCAGGACAT...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114750.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGACCCTGGCCAGGAGTTaGCACTACTGTGGTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLTLARS*HYCGYL Trigger: AAGGTAACCACAGTAGTGGCAACTCCTGGCCAGGGT...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGGAGTTGCCACTACTGTaGTTACCTTGCTGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLELPLL*LPCCHL Trigger: AAGATGGCAGCAAGGTAACCACAGTAGTGGCAACTC...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGCAGGGAGTGTCTGCTTaGCTCGACTATAGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLQGVSA*LDYSVW Trigger: CCAGACACTATAGTCGAGCCAAGCAGACACTCCCTG...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCATTTGGGAGGGAAGTAGGTAAGGAGAGAGCAAGCTCGGGAGCTCCCAGATATCTGAGGCTGCTGTaGCGTTGGCAGGCGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFGREVGKERASSGAPRYLRLL*RWQAVK Trigger: CTTCACCGCCTGCCAACGCCACAGCAGCCTCAGATA...TCTGGGAGCTCCCGAGCTTGCTCTCTCCTTACCTACTTCCCTCCCAAATGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGCTCGACTATAGTGTCTaGCGACTCTGTACACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWLDYSV*RLCTLS Trigger: AGACAGTGTACAGAGTCGCCAGACACTATAGTCGAG...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGTCCAAAGATCAACTCTaGTGCCCTGTAGTACCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWSKDQL*CPVVPR Trigger: TCTCGGTACTACAGGGCACCAGAGTTGATCTTTGGA...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | CACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCGCGCAGCTGGCTCCTaGGGGCTGTTCAGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLSSQPISSCALYQSLTRAAGS*GLFRWS Trigger: ACTCCACCTGAACAGCCCCCAGGAGCCAGCTGCGCG...CGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGCAATTCATCGAAAAATaGATGTGCACAAGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLQFIEK*MCTSFQ Trigger: CTGGAAGCTTGTGCACATTCATTTTTCGATGAATTG...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR TCA 90 bp | AATCCCAACTCTGGGAGATCTGGCATTGGCCAAACTTTCTCTGGAAGATTCCAAGGTGAAGCAGCGGCCTaGATCCGAGCATGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NPNSGRSGIGQTFSGRFQGEAAA*IRACGG Trigger: CCCTCCACATGCTCGGATTCAGGCCGCTGCTTCACC...TTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCAGATCTCCCAGAGTTGGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR GCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGAAAGATCAACTCTGGTaGCCTGTAGTACCGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWKDQLW*PVVPRT Trigger: TGTTCTCGGTACTACAGGGCACCAGAGTTGATCTTT...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCCTCTCCGCAAAGGAGGTaGTTCTCGGTCGCCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PAKLPTNFKLCTVSKSYASPQRR*FSVAPT Trigger: TGTCGGGGCGACCGAGAACCACCTCCTTTGCGGAGA...GGCGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGAGATATATGAAACATTaGGCTCTCCTCGGACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLRYMKH*ALLGPA Trigger: AGCTGGTCCGAGGAGAGCCCAATGTTTCATATATCT...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLSQSLA*YTTPND Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGAGACTTCTGAACAGCTaGTACATATACAACTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLRLLNS*YIYNLT Trigger: TGTCAAGTTGTATATGTATCAGCTGTTCAGAAGTCT...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGTATAGGCTAGACTTCTaGACAGCTGATACATATACA | + |
|
Preference number: 4 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLYRLDF*TADTYT Trigger: TGTATATGTATCAGCTGTTCAGAAGTCTAGCCTATA...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGCGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLRTMLQ*SSFLMI Trigger: GATCATGAGAAAGCTAGACCACTGTAACATAGTCCG...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGTTTAATGTCTCGATaGCAGATTCCAAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWGLMSR*QIPKEW Trigger: CCATTCCTTTGGAATCTGCCATCGAGACATTAAACC...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CCA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGTTTAATGTCTCGATaGCAGATTCCAAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLGLMSR*QIPKEW Trigger: CCATTCCTTTGGAATCTGCCATCGAGACATTAAACC...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGCAACAAGAGGTTCTGTaGTTTAATGTCTCGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWQQEVL*FNVSMA Trigger: TGCCATCGAGACATTAAACCACAGAACCTCTTGTTG...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CCA 90 bp | CTCTCATTTGGGAGGGAAGTAGGTAAGGAGAGAGCAAGCTCGGGAGCTCCCAGATCCAAAGATCAACTCTaGTGCCCTGTAGTACCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSFGREVGKERASSGAPRSKDQL*CPVVPR Trigger: TCTCGGTACTACAGGGCACCAGAGTTGATCTTTGGA...TCTGGGAGCTCCCGAGCTTGCTCTCTCCTTACCTACTTCCCTCCCAAATGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CCA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGACCATACATCTATACTaGACGTGTAATCAGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLTIHLY*TCNQWL Trigger: GAGCCACTGATTACACGTCCAGTATAGATGTATGGT...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CCA 90 bp | GCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCCAGGTTTCTTCTGTTGCGGTaGGGGCGTGAGGCAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKLPTNFKLCTVSKSYARFLLLR*GREAGV Trigger: GACTCCTGCCTCACGCCCCCACCGCAACAGAAGAAA...CCTGGCGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR TCA 90 bp | ACACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGTTGCGGTGGGGGCGTaGGGCAGGAGTCTGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPAKLPTNFKLCTVSKSYVAVGA*GRSLVF Trigger: AAAAACCAGACTCCTGCCTCACGCCCCCACCGCAAC...GTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCCAGGCCCAAAAGCTGAAGGCTaGTGCACTGGCTTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSQPISSCALYQSLTPGPKAEG*CTGLQL Trigger: GAGCTGCAAGCCAGTGCAGCAGCCTTCAGCTTTTGG...GCCTGGCGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR GCA 90 bp | CACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCAGGTTTTCTTCTGTTaGGGTGGGGGCGTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLLSSQPISSCALYQSLTQVFFC*GGGVRQ Trigger: CTGCCTCACGCCCCCACCGCAACAGAAGAAAACCTG...CGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
||
| CDS-3UTR CCA 90 bp | CACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGTGCAATTGCCTCTGGTaGAGTTCGGGGCCGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLLSSQPISSCALYQSLTCNCLW*SSGPED Trigger: GTCTTCCGGCCCCGAACTCCACCAGAGGCAATTGCA...CGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCATTTGGGAGGGAAGTAGGTAAGGAGAGAGCAAGCTCGGGAGCTCCCAGAACCATACATCTATACTaGACGTGTAATCAGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSFGREVGKERASSGAPRTIHLY*TCNQWL Trigger: GAGCCACTGATTACACGTCCAGTATAGATGTATGGT...TCTGGGAGCTCCCGAGCTTGCTCTCTCCTTACCTACTTCCCTCCCAAATGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR TCA 90 bp | TTTACGTCCACAGGGATAGAGAATAGAGGGAGTCCTTTTAGGACCTCTGCATTGGGTGGAGTTGGAAGCTaGTGCAGAAGCGGCGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: FTSTGIENRGSPFRTSALGGVGS*CRSGVI Trigger: AATAACGCCGCTTCTGCATCAGCTTCCAACTCCACC...CAATGCAGAGGTCCTAAAAGGACTCCCTCTATTCTCTATCCCTGTGGACGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR GCA 90 bp | CAGCCACACCAAACCATGGACACAGTAACCAAAGACAGCAGCTTATACATGTTTAAAGCTGAAGGCTGCTaGACTGGCTTGCAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPHQTMDTVTKDSSLYMFKAEGC*TGLQLS Trigger: GGAGAGCTGCAAGCCAGTGCAGCAGCCTTCAGCTTT...AAACATGTATAAGCTGCTGTCTTTGGTTACTGTGTCCATGGTTTGGTGTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR GCA 90 bp | ACACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACTGGCACTCAAGTAAGTaGTGGTCTTTCCCGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPAKLPTNFKLCTVSKSYWHSSK*WSFPRS Trigger: GCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCA...GTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCAGACTCACACACGTGTTGGTTACATGGGTGGGACTGACCCAATGTCCAGATATATGAAACATTaGGCTCTCCTCGGACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NEQTHTRVGYMGGTDPMSRYMKH*ALLGPA Trigger: AGCTGGTCCGAGGAGAGCCCAATGTTTCATATATCT...GGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CCA 90 bp | CACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCTGTTCAGGTGGAGTTaGAAGCTGATGCAGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLSSQPISSCALYQSLTLFRWS*KLMQKR Trigger: CCGCTTCTGCATCAGCTTCCAACTCCACCTGAACAG...CGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR CCA 90 bp | ACACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACCACTCAAGTAAGTGCTaGTCTTTCCCGCGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPAKLPTNFKLCTVSKSYHSSKC*SFPRSW Trigger: CCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTG...GTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTACACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCATGCTACCAAAAGCTaGAGGCTGCTGCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELHLLSSQPISSCALYQSHATKS*RLLHWL Trigger: AAGCCAGTGCAGCAGCCTTCAGCTTTTGGTAGCATG...ACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGTAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR TCA 90 bp | AGGATAAGTACACATTGTACAAGTGACAGTAAGTCCCTGGTGAGTTACACCTGCGGTGGAGTTGGAAGCTaGTGCAGAAGCGGCGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: RISTHCTSDSKSLVSYTCGGVGS*CRSGVI Trigger: AATAACGCCGCTTCTGCATCAGCTTCCAACTCCACC...GCAGGTGTAACTCACCAGGGACTTACTGTCACTTGTACAATGTGTACTTATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000231437.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTACACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTTTGTGTTTAATGCTCTaGTCCTCCCCGCCCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELHLLSSQPISSCALYQSLCLML*SSPPNP Trigger: AGGGTTGGGCGGGGAGGAGCAGAGCATTAAACACAA...ACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGTAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR GCA 90 bp | AACATACATTATCCAGTATTGGAAATGAGCAGACTCACACACGTGTTGGTTACAGCTGCACAGTGCAATTaGCTCTGGTGGAGTTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NIHYPVLEMSRLTHVLVTAAQCN*LWWSSG Trigger: CCCCGAACTCCACCAGAGGCAATTGCACTGTGCAGC...TGTAACCAACACGTGTGTGAGTCTGCTCATTTCCAATACTGGATAATGTATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR GCA 90 bp | GCTTCAGATTTTAGTGACCTCCCTGGGCTACCAATAATACACCTTGGTTTTTCTTCTCCTCGGACCAGCTaGTTTGCACTTCCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASDFSDLPGLPIIHLGFSSPRTS*FALPKS Trigger: TGACTTTGGAAGTGCAAAGCAGCTGGTCCGAGGAGA...AGAAAAACCAAGGTGTATTATTGGTAGCCCAGGGAGGTCACTAAAATCTGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CCA 90 bp | AACATACATTATCCAGTATTGGAAATGAGCAGACTCACACACGTGTTGGTTACAATAACTGACTTCCTGTaGCCTGTCAGGACCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NIHYPVLEMSRLTHVLVTITDFL*PVRTLA Trigger: GGCCAGGGTCCTGACAGGCCACAGGAAGTCAGTTAT...TGTAACCAACACGTGTGTGAGTCTGCTCATTTCCAATACTGGATAATGTATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CCA 90 bp | AATCCCAACTCTGGGAGATCTGGCATTGGCCAAACTTTCTCTGGAAGATTCCAACAACAAGAGGTTCTGTaGTTTAATGTCTCGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPNSGRSGIGQTFSGRFQQQEVL*FNVSMA Trigger: TGCCATCGAGACATTAAACCACAGAACCTCTTGTTG...TTGGAATCTTCCAGAGAAAGTTTGGCCAATGCCAGATCTCCCAGAGTTGGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR TCA 90 bp | CACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGGATACATATACAACTTaGCATAGATCACAGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLLSSQPISSCALYQSLTDTYTT*HRSQGV Trigger: CACTCCCTGTGATCTATGTCAAGTTGTATATGTATC...CGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR TCA 90 bp | ACACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACCAATTCATCGAAAAATaGATGTGCACAAGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPAKLPTNFKLCTVSKSYQFIEK*MCTSFQ Trigger: CTGGAAGCTTGTGCACATTCATTTTTCGATGAATTG...GTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CCA 90 bp | AGGATAAGTACACATTGTACAAGTGACAGTAAGTCCCTGGTGAGTTACACCTGCCGTGAGGCAGGAGTCTaGTTTTTAAGGTATACAATA | + |
|
Preference number: 4 (lower is better) Translates to: RISTHCTSDSKSLVSYTCREAGV*FLRYTI Trigger: TATTGTATACCTTAAAAACCAGACTCCTGCCTCACG...GCAGGTGTAACTCACCAGGGACTTACTGTCACTTGTACAATGTGTACTTATCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR TCA 90 bp | CAGCCACACCAAACCATGGACACAGTAACCAAAGACAGCAGCTTATACATGTTTTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPHQTMDTVTKDSSLYMFSQSLA*YTTPND Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...AAACATGTATAAGCTGCTGTCTTTGGTTACTGTGTCCATGGTTTGGTGTGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR TCA 90 bp | GAGTTACACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTTATAGGCTAGACTTCTaGACAGCTGATACATATACA | + |
|
Preference number: 4 (lower is better) Translates to: ELHLLSSQPISSCALYQSYRLDF*TADTYT Trigger: TGTATATGTATCAGCTGTTCAGAAGTCTAGCCTATA...ACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGTAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR GCA 90 bp | ATTGCTAGAGTTATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAAGATCAACTCTGGTaGCCTGTAGTACCGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: IARVIVTIIQAGTYCTELKDQLW*PVVPRT Trigger: TGTTCTCGGTACTACAGGGCACCAGAGTTGATCTTT...TAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAATAACTCTAGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CCA 90 bp | AACATACATTATCCAGTATTGGAAATGAGCAGACTCACACACGTGTTGGTTACACGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: NIHYPVLEMSRLTHVLVTRTMLQ*SSFLMI Trigger: GATCATGAGAAAGCTAGACCACTGTAACATAGTCCG...TGTAACCAACACGTGTGTGAGTCTGCTCATTTCCAATACTGGATAATGTATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CCA 90 bp | AGGATAAGTACACATTGTACAAGTGACAGTAAGTCCCTGGTGAGTTACACCTGCAAGAAAAGATTGTCGTaGGAGAGATTGTGTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: RISTHCTSDSKSLVSYTCKKRLS*ERLCLM Trigger: CATTAAACACAATCTCTCCCACGACAATCTTTTCTT...GCAGGTGTAACTCACCAGGGACTTACTGTCACTTGTACAATGTGTACTTATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR TCA 90 bp | AACATACATTATCCAGTATTGGAAATGAGCAGACTCACACACGTGTTGGTTACAAGACTTCTGAACAGCTaGTACATATACAACTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NIHYPVLEMSRLTHVLVTRLLNS*YIYNLT Trigger: TGTCAAGTTGTATATGTATCAGCTGTTCAGAAGTCT...TGTAACCAACACGTGTGTGAGTCTGCTCATTTCCAATACTGGATAATGTATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CAA 90 bp | TGCCCCTGGCCTGCCACCTTCCTGTTCTTCGCTTTCCGATGCACCCAGAGCTGCGGCTGCTGCACTGGCTaGCAGCTCTCCGCAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CPWPATFLFFAFRCTQSCGCCTG*QLSAKE Trigger: CTCCTTTGCGGAGAGCTGCAAGCCAGTGCAGCAGCC...GCAGCTCTGGGTGCATCGGAAAGCGAAGAACAGGAAGGTGGCAGGCCAGGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CAA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGAGGCTGCTGTGGCGTaGGCAGGCGGTGAAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWEAAVA*AGGEAA Trigger: CGCTGCTTCACCGCCTGCCAACGCCACAGCAGCCTC...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CAA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGCTGCTGCACTGGCTaGCAGCTCTCCGCAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLGCCTG*QLSAKE Trigger: CTCCTTTGCGGAGAGCTGCAAGCCAGTGCAGCAGCC...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS CCA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTaGGGGCTGTTCAGGTGGAGTTGGAAGCTGATGCAGAAGCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SGTQVSAGLSRAAGS*GLFRWSWKLMQKRR Trigger: ACGCCGCTTCTGCATCAGCTTCCAACTCCACCTGAACAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS CCA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTaGCTCCTGGGGGCTGTTCAGGTGGAGTTGGAAGCTGATGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VAEWHSSKCWSFPRS*LLGAVQVELEADAE Trigger: TTCTGCATCAGCTTCCAACTCCACCTGAACAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGCTCGGACCAGCTGCTTaGCACTTCCAAAGTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLLGPAA*HFQSHR Trigger: TCTGTGACTTTGGAAGTGCAAAGCAGCTGGTCCGAG...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCCAGGCGAGGCTGCTGTGGCGTaGGCAGGCGGTGAAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSSQPISSCALYQSLTPGEAAVA*AGGEAA Trigger: CGCTGCTTCACCGCCTGCCAACGCCACAGCAGCCTC...GCCTGGCGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR CAA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGACTACTGTGGTTACCTaGCTGCCATCTTTATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLTTVVT*LPSLSL Trigger: CAGAGATAAAGATGGCAGCAAGGTAACCACAGTAGT...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGCAGATATATGAAACATaGGGCTCTCCTCGGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLQIYET*GSPRTS Trigger: GCTGGTCCGAGGAGAGCCCAATGTTTCATATATCTG...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGCAGACTCACACACGTGTTGGTTACATGGGTGGGACTGACCCAATGTCCGACCCTGGCCAGGAGTaGCCACTACTGTGGTTACCT | + |
|
Preference number: 5 (lower is better) Translates to: NEQTHTRVGYMGGTDPMSDPGQE*PLLWLP Trigger: AGGTAACCACAGTAGTGGCAACTCCTGGCCAGGGTC...GGACATTGGGTCAGTCCCACCCATGTAACCAACACGTGTGTGAGTCTGCTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
||
| CDS-3UTR CAA 90 bp | CTCTCATTTGGGAGGGAAGTAGGTAAGGAGAGAGCAAGCTCGGGAGCTCCCAGACTCGGACCAGCTGCTTaGCACTTCCAAAGTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSFGREVGKERASSGAPRLGPAA*HFQSHR Trigger: TCTGTGACTTTGGAAGTGCAAAGCAGCTGGTCCGAG...TCTGGGAGCTCCCGAGCTTGCTCTCTCCTTACCTACTTCCCTCCCAAATGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CAA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGTCCTGTAGAACTTTCTaGATGGCAACCAGTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLSCRTF*MATSSP Trigger: TGGAGAACTGGTTGCCATCAAGAAAGTTCTACAGGA...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CAA 90 bp | AGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGGGGCTGAGGATGTGCCTTGATTaGAGGGAATTTGAATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SGTQVSAGLSRAAGSWGLRMCLD*REFEFC Trigger: ACAGAATTCAAATTCCCTCAAATCAAGGCACATCCT...CAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS GCA 90 bp | TCTTTATCTCTGCTAACTTTCATGCTACCAAAAGCTGAAGGCTGCTaGACTGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTCGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: SLSLLTFMLPKAEGC*TGLQLSAKEVVLGR Trigger: GCGACCGAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCAGTGCAGCAGCCTTCAGCTTTTGGTAGCATGAAAGTTAGCAGAGATAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CAA 90 bp | GTTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGTGTCCCCAGGAAATATaGGTTGTCCTAGCAACAATT | + |
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Preference number: 5 (lower is better) Translates to: VAEWHSSKCWSFPRSWLLCPQEI*VVLATI Trigger: AATTGTTGCTAGGACAACCAATATTTCCTGGGGACA...CAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS TCA 90 bp | CTTGCTGCCATCTTTATCTCTGCTAACTTTCATGCTACCAAAAGCTaGAGGCTGCTGCACTGGCTTGCAGCTCTCCGCAAAGGAGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: LAAIFISANFHATKS*RLLHWLAALRKGGG Trigger: ACCACCTCCTTTGCGGAGAGCTGCAAGCCAGTGCAGCAGCCTTCAGCTTTTGGTAGCATGAAAGTTAGCAGAGATAAAGATGGCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS GCA 90 bp | CCATCTTTATCTCTGCTAACTTTCATGCTACCAAAAGCTGAAGGCTaGTGCACTGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: PSLSLLTFMLPKAEG*CTGLQLSAKEVVLG Trigger: ACCGAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCAGTGCAGCAGCCTTCAGCTTTTGGTAGCATGAAAGTTAGCAGAGATAAAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGAGTGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTGGAGGATGTGCCTTGATTaGAGGGAATTTGAATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LLSGTQVSAGLSRAAGSWRMCLD*REFEFC Trigger: ACAGAATTCAAATTCCCTCAAATCAAGGCACATCCT...CCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCACTCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS-3UTR CAA 90 bp | CTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCCAGGCAACCCTCCCCACCTCTaGGATCTCCTGAAAAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LSSQPISSCALYQSLTPGNPPHL*DLLKSE Trigger: CTCACTTTTCAGGAGATCCAAGAGGTGGGGAGGGTT...GCCTGGCGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR CAA 90 bp | AGGATAAGTACACATTGTACAAGTGACAGTAAGTCCCTGGTGAGTTACACCTGCACAGGTTTTCTTCTGTaGCGGTGGGGGCGTGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RISTHCTSDSKSLVSYTCTGFLL*RWGREA Trigger: TGCCTCACGCCCCCACCGCAACAGAAGAAAACCTGT...GCAGGTGTAACTCACCAGGGACTTACTGTCACTTGTACAATGTGTACTTATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR CAA 90 bp | ACACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCTGTTCAGGTGGAGTaGGAAGCTGATGCAGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: TPAKLPTNFKLCTVSKSYAVQVE*EADAEA Trigger: CGCTTCTGCATCAGCTTCCAACTCCACCTGAACAGC...GTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR CAA 90 bp | GCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCCAGGACTACTGTGGTTACCTaGCTGCCATCTTTATCTCTG | + |
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Preference number: 5 (lower is better) Translates to: AKLPTNFKLCTVSKSYARTTVVT*LPSLSL Trigger: CAGAGATAAAGATGGCAGCAAGGTAACCACAGTAGT...CCTGGCGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CAA 90 bp | CCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCCTCCTGTAGAACTTTCTaGATGGCAACCAGTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PAKLPTNFKLCTVSKSYASCRTF*MATSSP Trigger: TGGAGAACTGGTTGCCATCAAGAAAGTTCTACAGGA...GGCGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CAA 90 bp | AGGATAAGTACACATTGTACAAGTGACAGTAAGTCCCTGGTGAGTTACACCTGCTGTCCCCAGGAAATATaGGTTGTCCTAGCAACAATT | + |
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Preference number: 5 (lower is better) Translates to: RISTHCTSDSKSLVSYTCCPQEI*VVLATI Trigger: AATTGTTGCTAGGACAACCAATATTTCCTGGGGACA...GCAGGTGTAACTCACCAGGGACTTACTGTCACTTGTACAATGTGTACTTATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CAA 90 bp | CTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACGCCAGGCAAAGAAAAGAAAAGATaGTCGTGGGAGAGATTGTGT | + |
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Preference number: 5 (lower is better) Translates to: LSSQPISSCALYQSLTPGKEKKR*SWERLC Trigger: ACACAATCTCTCCCACGACAATCTTTTCTTTTCTTT...GCCTGGCGTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS-3UTR CAA 90 bp | ATTGCTAGAGTTATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTACAGATATATGAAACATaGGGCTCTCCTCGGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: IARVIVTIIQAGTYCTELQIYET*GSPRTS Trigger: GCTGGTCCGAGGAGAGCCCAATGTTTCATATATCTG...TAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAATAACTCTAGCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023507.13 |
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| CDS-3UTR CAA 90 bp | ACACCTGCTAAGCTCCCAACCAATTTCAAGCTGTGCACTGTATCAAAGTCTTACAGGATGTGCCTTGATTaGAGGGAATTTGAATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: TPAKLPTNFKLCTVSKSYRMCLD*REFEFC Trigger: ACAGAATTCAAATTCCCTCAAATCAAGGCACATCCT...GTAAGACTTTGATACAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000231437.2 |
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| CDS CCA 72 bp | CAAGTAAGTGCTGGTCTTTCCCGCGCAGCTGGCTCCTaGGGGCTGTTCAGGTGGAGTTGGAAGCTGATGCAG | + |
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Preference number: 6 (lower is better) Translates to: QVSAGLSRAAGS*GLFRWSWKLMQ Trigger: CTGCATCAGCTTCCAACTCCACCTGAACAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS CCA 72 bp | TGGCACTCAAGTAAGTGCTGGTCTTTCCCGCGCAGCTaGCTCCTGGGGGCTGTTCAGGTGGAGTTGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: WHSSKCWSFPRS*LLGAVQVELEA Trigger: AGCTTCCAACTCCACCTGAACAGCCCCCAGGAGCCAGCTGCGCGGGAAAGACCAGCACTTACTTGAGTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231437.2 |
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| CDS CCA 72 bp | TCACAGGGAGTGTCTGCTTGGCTCGACTATAGTGTCTaGCGACTCTGTACACTGTCTCCGGAACATAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SQGVSAWLDYSV*RLCTLSPEHSP Trigger: TGGACTATGTTCCGGAGACAGTGTACAGAGTCGCCAGACACTATAGTCGAGCCAAGCAGACACTCCCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS TCA 72 bp | ATCTTTATCTCTGCTAACTTTCATGCTACCAAAAGCTaGAGGCTGCTGCACTGGCTTGCAGCTCTCCGCAAA | + |
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Preference number: 6 (lower is better) Translates to: IFISANFHATKS*RLLHWLAALRK Trigger: TTTGCGGAGAGCTGCAAGCCAGTGCAGCAGCCTTCAGCTTTTGGTAGCATGAAAGTTAGCAGAGATAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS CAA 72 bp | TCTCGGTTCTTAAATCGCTTGTCCTGTAGAACTTTCTaGATGGCAACCAGTTCTCCAGAATCACAAAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRFLNRLSCRTF*MATSSPESQSL Trigger: CAAACTTTGTGATTCTGGAGAACTGGTTGCCATCAAGAAAGTTCTACAGGACAAGCGATTTAAGAACCGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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| CDS TCA 72 bp | ATGGCAACCAGTTCTCCAGAATCACAAAGTTTGGCTTaGTATACCACACCAAATGATCCATTTCCAATCACT | + |
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Preference number: 6 (lower is better) Translates to: MATSSPESQSLA*YTTPNDPFPIT Trigger: AGTGATTGGAAATGGATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCTGGAGAACTGGTTGCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023507.13 ENSMUST00000114750.2 |
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