Pregenerated sensors for GSK3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057177Ensembl transcript IDs: ENSMUST00000071739.12, ENSMUST00000108411.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGGAGCTTGATGGGCTGTaGCCCCCTTCCCAGCGCCAC | + |
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Preference number: 2 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGELDGL*PPSQRH Trigger: GTGGCGCTGGGAAGGGGGCCACAGCCCATCAAGCTC...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGCTTCCCAGATGGACGTaGAGGGGTAGTCGGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGLPRWT*RGSRWG Trigger: GCCCCACCGACTACCCCTCCACGTCCATCTGGGAAG...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGTTGGGCCTTCCCAGATaGACGTGGAGGGGTAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: LYSPPSRMGRGRKPWEQRLGLPR*TWRGSR Trigger: CCGACTACCCCTCCACGTCCATCTGGGAAGGCCCAA...CCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCCTTCCCAGCGCCACTTaGGCCTTCCCAGATGGACGT | + |
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Preference number: 2 (lower is better) Translates to: HQGLSLLPSFQDGEREEALPSAT*AFPDGR Trigger: ACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAG...GGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCAGGGAAGGGAAGACGAGAGATGGGCTGGGCTGGTTCTATTTACAAGGGCAGAGGTTAGGCTGCTaGGGGAGGCCTAGATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GAREGKTRDGLGWFYLQGQRLGC*GRPRCW Trigger: CCAGCATCTAGGCCTCCCTCAGCAGCCTAACCTCTG...CCCTTGTAAATAGAACCAGCCCAGCCCATCTCTCGTCTTCCCTTCCCTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGATTGGGCCTTCCCAGATaGACGTGGAGGGGTAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: KTPGTLSTPLLPGWGEGGLGLPR*TWRGSR Trigger: CCGACTACCCCTCCACGTCCATCTGGGAAGGCCCAA...TCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTGTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTGAGCTTGATGGGCTGTaGCCCCCTTCCCAGCGCCAC | + |
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Preference number: 2 (lower is better) Translates to: RSVHRQTLLWKLRHQGLSELDGL*PPSQRH Trigger: GTGGCGCTGGGAAGGGGGCCACAGCCCATCAAGCTC...AGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTGTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTTCCCAGATGGACGTaGAGGGGTAGTCGGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: RSVHRQTLLWKLRHQGLSLPRWT*RGSRWG Trigger: GCCCCACCGACTACCCCTCCACGTCCATCTGGGAAG...AGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTGTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTCAGAGGTTAGGCTGCTaGGGGAGGCCTAGATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VCTQANLTVETKTPGTLSQRLGC*GRPRCW Trigger: CCAGCATCTAGGCCTCCCTCAGCAGCCTAACCTCTG...AGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTAGGGAAGACGAGAGATaGGCTGGGCTGGTTCTATTT | + |
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Preference number: 2 (lower is better) Translates to: VCTQANLTVETKTPGTLSREDER*AGLVLF Trigger: AAATAGAACCAGCCCAGCCCATCTCTCGTCTTCCCT...AGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CCA 90 bp | GTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCAGACGAGAGATGGGCTaGGCTGGTTCTATTTACAAG | + |
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Preference number: 2 (lower is better) Translates to: VHRQTLLWKLRHQGLSLLRREMG*AGSIYK Trigger: CTTGTAAATAGAACCAGCCCAGCCCATCTCTCGTCT...GAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR CCA 72 bp | AGCTTGATGGGCTGTGGCCCCCTTCCCAGCGCCACTTaGGCCTTCCCAGATGGACGTGGAGGGGTAGTCGGT | + |
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Preference number: 3 (lower is better) Translates to: SLMGCGPLPSAT*AFPDGRGGVVG Trigger: ACCGACTACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAGCCCATCAAGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CAA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGCCTTCCCAGCGCCACTaGGGCCTTCCCAGATGGACG | + |
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Preference number: 3 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGPSQRH*GLPRWT Trigger: CGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGG...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR-3UTR CAA 90 bp | CACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCCCTTCCCAGCGCCACTaGGGCCTTCCCAGATGGACG | + |
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Preference number: 3 (lower is better) Translates to: HQGLSLLPSFQDGEREEAPSQRH*GLPRWT Trigger: CGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGG...GGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR CCA 72 bp | ATTGAACAGAGGTCTGTACACAGGCAAACCTTACTGTaGAAACTAAGACACCAGGGACTCTCTCTACTCCCC | + |
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Preference number: 3 (lower is better) Translates to: IEQRSVHRQTLL*KLRHQGLSLLP Trigger: GGGGAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGACCTCTGTTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CTGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTTCCGCCTCCGCCTCCTaGCTCCGCGAACGAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LWPPSQRHLGLPRWTWRGSASAS*LRERAG Trigger: ACCAGCTCGTTCGCGGAGCCAGGAGGCGGAGGCGGA...ACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTAGTCGGTGGGGCCCGGTCGTTGGGGAGCTaGGCTCCGAGTCTCCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PSATWAFPDGRGGVVGGARSLGS*APSLRS Trigger: ACTGCGGAGACTCGGAGCCCAGCTCCCCAACGACCG...GGCCCCACCGACTACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| 3UTR CAA 72 bp | GAGCTTGATGGGCTGTGGCCCCCTTCCCAGCGCCACTaGGGCCTTCCCAGATGGACGTGGAGGGGTAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: ELDGLWPPSQRH*GLPRWTWRGSR Trigger: CCGACTACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAGCCCATCAAGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR GCA 90 bp | TCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGCTTTCCCGCCGCCAGTaGCTCCTGGGCCAGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SLLPSFQDGEREEALGAELSRRQ*LLGQRP Trigger: CGGCCTCTGGCCCAGGAGGCACTGGCGGCGGGAAAG...CTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR GCA 90 bp | CTGGGGGTAGTTCATTTACCTCTGCCCTCTAGTCTAGGGGCCCAGCCAGGGCAGCTTTCCCGCCGCCAGTaGCTCCTGGGCCAGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LGVVHLPLPSSLGAQPGQLSRRQ*LLGQRP Trigger: CGGCCTCTGGCCCAGGAGGCACTGGCGGCGGGAAAG...CTGCCCTGGCTGGGCCCCTAGACTAGAGGGCAGAGGTAAATGAACTACCCCCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | CACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCACCCATAGCCCCGACTaGCGCTTTCCCGCCGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HQGLSLLPSFQDGEREEATHSPD*RFPAAS Trigger: ACTGGCGGCGGGAAAGCGTCAGTCGGGGCTATGGGT...GGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CTGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTTTCTTGGGAACGCTCTaGGCCTTGGCCTACAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LWPPSQRHLGLPRWTWRGFLGTL*ALAYSG Trigger: GCCACTGTAGGCCAAGGCCCAGAGCGTTCCCAAGAA...ACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | AAGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGATCCGCCTCCGCCTCCTaGCTCCGCGAACGAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KTPGTLSTPLLPGWGEGGSASAS*LRERAG Trigger: ACCAGCTCGTTCGCGGAGCCAGGAGGCGGAGGCGGA...TCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | GATGGGCTGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGCTGTGGCTCCAAAGATaGGTTCTGGAGCACGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: DGLWPPSQRHLGLPRWTWLWLQR*VLEHGS Trigger: ACTACCGTGCTCCAGAACTCATCTTTGGAGCCACAG...CCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAGCCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | CTGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTACCTTTGTCCAAGGGTaGGCTTTGATCTGGGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LWPPSQRHLGLPRWTWRGTFVQG*ALIWGN Trigger: GTTCCCCCAGATCAAAGCTCACCCTTGGACAAAGGT...ACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGGGTTGTAGGAAGTGGTaGGGGGAGAAGCAGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGGCRKW*GEKQGL Trigger: CAGGCCCTGCTTCTCCCCTCACCACTTCCTACAACC...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTAGTCGGTGGGGCCGCAGCCTCACAATATTaGAGTGGTCCAGCTTACGCA | + |
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Preference number: 4 (lower is better) Translates to: PSATWAFPDGRGGVVGGAAASQY*SGPAYA Trigger: TGCGTAAGCTGGACCACTGCAATATTGTGAGGCTGC...GGCCCCACCGACTACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | GGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGACAAGAAGGGGTACAGCTGGGGGTTCTTGGGAACGCTCTaGGCCTTGGCCTACAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GEREEALGAEDKKGYSWGFLGTL*ALAYSG Trigger: GCCACTGTAGGCCAAGGCCCAGAGCGTTCCCAAGAA...CCCCCAGCTGTACCCCTTCTTGTCCTCTGCTCCCAAGGCTTCCTCCCTCTCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGCCTTGGTGAAGTaGCGGGCCACTCGGTACACC | + |
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Preference number: 4 (lower is better) Translates to: HQGLSLLPSFQDGEREEALALVK*RATRYT Trigger: GGTGTACCGAGTGGCCCGCCACTTCACCAAGGCCAA...GGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | GGGGCCAGGGAAGGGAAGACGAGAGATGGGCTGGGCTGGTTCTATTTACAAGGGCGGTCGTTGGGGAGCTaGGCTCCGAGTCTCCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GAREGKTRDGLGWFYLQGRSLGS*APSLRS Trigger: ACTGCGGAGACTCGGAGCCCAGCTCCCCAACGACCG...CCCTTGTAAATAGAACCAGCCCAGCCCATCTCTCGTCTTCCCTTCCCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | TGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTACAAAATCGCAGAGCTTaGGGACAGCAGTGTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: CGPLPSATWAFPDGRGGVQNRRA*GQQCQG Trigger: ACCCTGACACTGCTGTCCTCAAGCTCTGCGATTTTG...TACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | CACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCGCTGGGGACCTCAAGTaGGGAGGGATGAGAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: HQGLSLLPSFQDGEREEAAGDLK*GGMRMA Trigger: TGCCATTCTCATCCCTCCTCACTTGAGGTCCCCAGC...GGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | ACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGACAAGGTTGTAGGAAGTGGTaGGGGGAGAAGCAGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TPLLPGWGEGGSLGSRGQGCRKW*GEKQGL Trigger: CAGGCCCTGCTTCTCCCCTCACCACTTCCTACAACC...TTGTCCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR GCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGCAGTTCCCTCGTCTCTaGCAGCCGTGCCTGGTATAC | + |
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Preference number: 4 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGQFPRL*QPCLVY Trigger: GTATACCAGGCACGGCTGGCAGAGACGAGGGAACTG...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR GCA 90 bp | GATGGGCTGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGGCAGCCTCACAATATTaGAGTGGTCCAGCTTACGCA | + |
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Preference number: 4 (lower is better) Translates to: DGLWPPSQRHLGLPRWTWAASQY*SGPAYA Trigger: TGCGTAAGCTGGACCACTGCAATATTGTGAGGCTGC...CCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAGCCCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGCAGTGGCTACCACTGTaGTCACCTTCCCGCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LYSPPSRMGRGRKPWEQRQWLPL*SPSRCH Trigger: GTGACAGCGGGAAGGTGACCACAGTGGTAGCCACTG...CCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGCAGTGGCTACCACTGTaGTCACCTTCCCGCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGQWLPL*SPSRCH Trigger: GTGACAGCGGGAAGGTGACCACAGTGGTAGCCACTG...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGGGCCTTGGCCTACAGTaGCTACCACTGTGGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: LYSPPSRMGRGRKPWEQRGLGLQ*LPLWSP Trigger: AGGTGACCACAGTGGTAGCCACTGTAGGCCAAGGCC...CCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGGAACGCTCTGGGCCTTaGCCTACAGTGGCTACCACT | + |
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Preference number: 4 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGERSGP*PTVATT Trigger: AGTGGTAGCCACTGTAGGCCAAGGCCCAGAGCGTTC...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCGAACGCTCTGGGCCTTaGCCTACAGTGGCTACCACT | + |
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Preference number: 4 (lower is better) Translates to: HQGLSLLPSFQDGEREEAERSGP*PTVATT Trigger: AGTGGTAGCCACTGTAGGCCAAGGCCCAGAGCGTTC...GGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CTGGGGGTAGTTCATTTACCTCTGCCCTCTAGTCTAGGGGCCCAGCCAGGGCAGTTGGCCTTGGTGAAGTaGCGGGCCACTCGGTACACC | + |
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Preference number: 4 (lower is better) Translates to: LGVVHLPLPSSLGAQPGQLALVK*RATRYT Trigger: GGTGTACCGAGTGGCCCGCCACTTCACCAAGGCCAA...CTGCCCTGGCTGGGCCCCTAGACTAGAGGGCAGAGGTAAATGAACTACCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CTGGGGGTAGTTCATTTACCTCTGCCCTCTAGTCTAGGGGCCCAGCCAGGGCAGAGAAGCAGGGCCTGCTaGGGACCTCAAGTGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LGVVHLPLPSSLGAQPGQRSRAC*GPQVRR Trigger: CCTCCTCACTTGAGGTCCCCAGCAGGCCCTGCTTCT...CTGCCCTGGCTGGGCCCCTAGACTAGAGGGCAGAGGTAAATGAACTACCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | CTGGGGGTAGTTCATTTACCTCTGCCCTCTAGTCTAGGGGCCCAGCCAGGGCAGGGCTTGATGTCACGGTaGCACACACCTTGGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LGVVHLPLPSSLGAQPGQGLMSR*HTPWEW Trigger: CCACTCCCAAGGTGTGTGTCACCGTGACATCAAGCC...CTGCCCTGGCTGGGCCCCTAGACTAGAGGGCAGAGGTAAATGAACTACCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | GATGGGCTGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGTCCAAAGATGAGTTCTaGAGCACGGTAGTACCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DGLWPPSQRHLGLPRWTWSKDEF*STVVPR Trigger: TCTCGGTACTACCGTGCTCCAGAACTCATCTTTGGA...CCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAGCCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGCAAAATCGCAGAGCTTaGGGACAGCAGTGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGQNRRA*GQQCQG Trigger: ACCCTGACACTGCTGTCCTCAAGCTCTGCGATTTTG...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGACCTTTGTCCAAGGGTaGGCTTTGATCTGGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGTFVQG*ALIWGN Trigger: GTTCCCCCAGATCAAAGCTCACCCTTGGACAAAGGT...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | CTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGTCTGCCAGCCGTGCCTaGTATACTACTCCGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYSPPSRMGRGRKPWEQRSASRA*YTTPNE Trigger: CTCATTCGGAGTAGTATACCAGGCACGGCTGGCAGA...CCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTAGTCGGTGGGGCCCTCACAATATTGCAGTaGTCCAGCTTACGCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: PSATWAFPDGRGGVVGGALTILQ*SSLRII Trigger: GATTATGCGTAAGCTGGACCACTGCAATATTGTGAG...GGCCCCACCGACTACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | AAGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGACCAGGGAAGATGGGCTaGCCGAGAAGTAGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTPGTLSTPLLPGWGEGGPGKMG*PRSSSA Trigger: TGCTGAGCTACTTCTCGGCCAGCCCATCTTCCCTGG...TCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCCAGGGAAGGGAAGACGAGAGATGGGCTGGGCTGGTTCTATTTACAAGGGTGTCCCCAGGGAAGATaGGCTGGCCGAGAAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAREGKTRDGLGWFYLQGCPQGR*AGREVA Trigger: AGCTACTTCTCGGCCAGCCCATCTTCCCTGGGGACA...CCCTTGTAAATAGAACCAGCCCAGCCCATCTCTCGTCTTCCCTTCCCTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | AGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAATGTCCCCAGGGAAGATaGGCTGGCCGAGAAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RHQGLSLLPSFQDGEREECPQGR*AGREVA Trigger: AGCTACTTCTCGGCCAGCCCATCTTCCCTGGGGACA...TTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGTAGTTCATTTACCTCTGCCCTCTAGTCTAGGGGCCCAGCCAGGGCAGATGATCTCCACAAGCTaGTCCACCCCACTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVVHLPLPSSLGAQPGQMISTS*STPLSP Trigger: TGGGGACAGTGGGGTGGACCAGCTTGTGGAGATCAT...CTGCCCTGGCTGGGCCCCTAGACTAGAGGGCAGAGGTAAATGAACTACCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGATGATCTCCACAAGCTaGTCCACCCCACTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLYSPPSRMGRGRKPWEQMISTS*STPLSP Trigger: TGGGGACAGTGGGGTGGACCAGCTTGTGGAGATCAT...CTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTGTGTCTTTGAAGATTTaGACACCTTTGTCCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWPPSQRHLGLPRWTWRGVSLKI*TPLSKG Trigger: ACCCTTGGACAAAGGTGTTCAAATCTTCAAAGACAC...ACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTCTCAGGTGGTGTCTTTaGAGATTTGAACACCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWPPSQRHLGLPRWTWRGLRWCL*RFEHLC Trigger: ACAAAGGTGTTCAAATCTTCAAAGACACCACCTGAG...ACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGCCAGTCTGAGCTTGTaGGGATGGGTTGTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLPSFQDGEREEALGAEASLSL*GWVVGS Trigger: ACTTCCTACAACCCATCCTCACAAGCTCAGACTGGC...CTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108411.2 |
||
| CDS-3UTR GCA 90 bp | AAGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGACGTCTCTGCCAGCCGTaGCTGGTATACTACTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTPGTLSTPLLPGWGEGGRLCQP*LVYYSE Trigger: TTCGGAGTAGTATACCAGGCACGGCTGGCAGAGACG...TCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CTGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTCTCACAATATTGCAGTaGTCCAGCTTACGCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: LWPPSQRHLGLPRWTWRGLTILQ*SSLRII Trigger: GATTATGCGTAAGCTGGACCACTGCAATATTGTGAG...ACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | CTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGCTCGGATTTGTTCCCTaGTTGGCGTTCCTAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: LYSPPSRMGRGRKPWEQRLGFVP*LAFLVP Trigger: AGGTACTAGGAACGCCAACCAGGGAACAAATCCGAG...CCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTAAATGGCATTGAGAGATaGTTGGATGGACAGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CGPLPSATWAFPDGRGGVNGIER*LDGQFT Trigger: GGTGAACTGTCCATCCAACCATCTCTCAATGCCATT...TACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCAGTTGTGGCATCAGATaGCTGCCAATCTTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HQGLSLLPSFQDGEREEASCGIR*LPILAS Trigger: ACTGGCCAAGATTGGCAGCCATCTGATGCCACAACT...GGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | CAGGGAAGGGAAGACGAGAGATGGGCTGGGCTGGTTCTATTTACAAGGGACCTGGCTGGGGACCTCAAGTaGGGAGGGATGAGAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGREDERWAGLVLFTRDLAGDLK*GGMRMA Trigger: TGCCATTCTCATCCCTCCTCACTTGAGGTCCCCAGC...CAGGTCCCTTGTAAATAGAACCAGCCCAGCCCATCTCTCGTCTTCCCTTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGCCTTCTTCTCCCCACTaGAGTAGAAAAAGTACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYSPPSRMGRGRKPWEQRPSSPH*SRKSTA Trigger: TGCGGTACTTTTTCTACTCCAGTGGGGAGAAGAAGG...CCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGACAACTCGGATTTGTTCCCTaGTTGGCGTTCCTAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLLPGWGEGGSLGSRGQLGFVP*LAFLVP Trigger: AGGTACTAGGAACGCCAACCAGGGAACAAATCCGAG...TTGTCCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | ACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGACAAAGTTGTGGCATCAGATaGCTGCCAATCTTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPLLPGWGEGGSLGSRGQSCGIR*LPILAS Trigger: ACTGGCCAAGATTGGCAGCCATCTGATGCCACAACT...TTGTCCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | GTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCACCCATAGCCCCGACTaGCGCTTTCCCGCCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHRQTLLWKLRHQGLSLLTHSPD*RFPAAS Trigger: ACTGGCGGCGGGAAAGCGTCAGTCGGGGCTATGGGT...GAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGGCAGTTCTCGGTTCTTaGACCTTTTGTCCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGAVLGS*TFCPEE Trigger: TTCTTCAGGACAAAAGGTTCAAGAACCGAGAACTGC...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | TCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGCCTTCTTCTCCCCACTaGAGTAGAAAAAGTACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLYSPPSRMGRGRKPWEQPSSPH*SRKSTA Trigger: TGCGGTACTTTTTCTACTCCAGTGGGGAGAAGAAGG...CTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | TACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGACAAAGCTCCGGAAGAGCTaGTACATGTACACCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YSPPSRMGRGRKPWEQRTKLRKS*YMYTLM Trigger: CATCAAGGTGTACATGTACCAGCTCTTCCGGAGCTT...TGTCCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | CTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGAATGGCATTGAGAGATaGTTGGATGGACAGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LYSPPSRMGRGRKPWEQRNGIER*LDGQFT Trigger: GGTGAACTGTCCATCCAACCATCTCTCAATGCCATT...CCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | CTGGGGGTAGTTCATTTACCTCTGCCCTCTAGTCTAGGGGCCCAGCCAGGGCAGGCAGTTCTCGGTTCTTaGACCTTTTGTCCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGVVHLPLPSSLGAQPGQAVLGS*TFCPEE Trigger: TTCTTCAGGACAAAAGGTTCAAGAACCGAGAACTGC...CTGCCCTGGCTGGGCCCCTAGACTAGAGGGCAGAGGTAAATGAACTACCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | GTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCTCAGCTTGGCCTTGGTaGAGTGGCGGGCCACTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VHRQTLLWKLRHQGLSLLSAWPW*SGGPLG Trigger: ACCGAGTGGCCCGCCACTTCACCAAGGCCAAGCTGA...GAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | AGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCCCCTCCGGCTTGATGTCACGGTaGCACACACCTTGGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQTLLWKLRHQGLSLLPSGLMSR*HTPWEW Trigger: CCACTCCCAAGGTGTGTGTCACCGTGACATCAAGCC...GGAGGGGAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR TCA 90 bp | GGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGGTGTCTTTGAAGATTTaGACACCTTTGTCCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTLSTPLLPGWGEGGSLGVSLKI*TPLSKG Trigger: ACCCTTGGACAAAGGTGTTCAAATCTTCAAAGACAC...CCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR GCA 90 bp | TACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGACAAGCTTACGCATAATCTaGAGTTCTCGGTTCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YSPPSRMGRGRKPWEQRTSLRII*SSRFLN Trigger: GTTCAAGAACCGAGAACTGCAGATTATGCGTAAGCT...TGTCCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CCA 90 bp | GTCTGTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTAGAAGCAGGGCCTGCTaGGGACCTCAAGTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCTQANLTVETKTPGTLSRSRAC*GPQVRR Trigger: CCTCCTCACTTGAGGTCCCCAGCAGGCCCTGCTTCT...AGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCCCCTCCGCAAATTCTGGGGCTTaGTGTCACGGTGACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: RQTLLWKLRHQGLSLLPSANSGA*CHGDTH Trigger: GTGTGTGTCACCGTGACATCAAGCCCCAGAATTTGC...GGAGGGGAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGCTGTGGCTCCAAAGATaGGTTCTGGAGCACGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLWKLRHQGLSLLPSFQLWLQR*VLEHGS Trigger: ACTACCGTGCTCCAGAACTCATCTTTGGAGCCACAG...CTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGCAATCTTGGCCAGTCTaGGCTTGTGAGGATGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLLWKLRHQGLSLLPSFQQSWPV*ACEDGL Trigger: CAACCCATCCTCACAAGCTCAGACTGGCCAAGATTG...CTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108411.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCCAGGGAAGGGAAGACGAGAGATGGGCTGGGCTGGTTCTATTTACAAGGGAGCTTACGCATAATCTaGAGTTCTCGGTTCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAREGKTRDGLGWFYLQGSLRII*SSRFLN Trigger: GTTCAAGAACCGAGAACTGCAGATTATGCGTAAGCT...CCCTTGTAAATAGAACCAGCCCAGCCCATCTCTCGTCTTCCCTTCCCTGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTCCAGGGAAGATGGGCTaGCCGAGAAGTAGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCTQANLTVETKTPGTLSPGKMG*PRSSSA Trigger: TGCTGAGCTACTTCTCGGCCAGCCCATCTTCCCTGG...AGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR GCA 90 bp | GTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCCGTCTCTGCCAGCCGTaGCTGGTATACTACTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHRQTLLWKLRHQGLSLLRLCQP*LVYYSE Trigger: TTCGGAGTAGTATACCAGGCACGGCTGGCAGAGACG...GAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTGCAAATTCTGGGGCTTaGTGTCACGGTGACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: RSVHRQTLLWKLRHQGLSANSGA*CHGDTH Trigger: GTGTGTGTCACCGTGACATCAAGCCCCAGAATTTGC...AGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTTCTGCCAGCCGTGCCTaGTATACTACTCCGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VCTQANLTVETKTPGTLSSASRA*YTTPNE Trigger: CTCATTCGGAGTAGTATACCAGGCACGGCTGGCAGA...AGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGAAGCTCCGGAAGAGCTaGTACATGTACACCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLLWKLRHQGLSLLPSFQKLRKS*YMYTLM Trigger: CATCAAGGTGTACATGTACCAGCTCTTCCGGAGCTT...CTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCCCCTCCTCCAAAGATGAGTTCTaGAGCACGGTAGTACCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQTLLWKLRHQGLSLLPSSKDEF*STVVPR Trigger: TCTCGGTACTACCGTGCTCCAGAACTCATCTTTGGA...GGAGGGGAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGCTCAGGTGGTGTCTTTaGAGATTTGAACACCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: TLLWKLRHQGLSLLPSFQLRWCL*RFEHLC Trigger: ACAAAGGTGTTCAAATCTTCAAAGACACCACCTGAG...CTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | TGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTAGGAACGCTCTGGGCCTaGGCCTACAGTGGCTACCAC | + |
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Preference number: 5 (lower is better) Translates to: CGPLPSATWAFPDGRGGVGTLWA*AYSGYH Trigger: GTGGTAGCCACTGTAGGCCAAGGCCCAGAGCGTTCC...TACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | TGTGGCCCCCTTCCCAGCGCCACTTGGGCCTTCCCAGATGGACGTGGAGGGGTACGAGTGGGGAGAGCCTaGAGGATGGCGTGTACTCCA | + |
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Preference number: 5 (lower is better) Translates to: CGPLPSATWAFPDGRGGVRVGRA*RMACTP Trigger: TGGAGTACACGCCATCCTCAAGGCTCTCCCCACTCG...TACCCCTCCACGTCCATCTGGGAAGGCCCAAGTGGCGCTGGGAAGGGGGCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | GGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGACAAGAAGGGGTACAGCTGGGGGCGAGTGGGGAGAGCCTaGAGGATGGCGTGTACTCCA | + |
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Preference number: 5 (lower is better) Translates to: GEREEALGAEDKKGYSWGRVGRA*RMACTP Trigger: TGGAGTACACGCCATCCTCAAGGCTCTCCCCACTCG...CCCCCAGCTGTACCCCTTCTTGTCCTCTGCTCCCAAGGCTTCCTCCCTCTCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | GGGGCCAGGGAAGGGAAGACGAGAGATGGGCTGGGCTGGTTCTATTTACAAGGGGGAACGCTCTGGGCCTaGGCCTACAGTGGCTACCAC | + |
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Preference number: 5 (lower is better) Translates to: GAREGKTRDGLGWFYLQGGTLWA*AYSGYH Trigger: GTGGTAGCCACTGTAGGCCAAGGCCCAGAGCGTTCC...CCCTTGTAAATAGAACCAGCCCAGCCCATCTCTCGTCTTCCCTTCCCTGGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS CCA 90 bp | CAGTGTAAGCCACTTCTTGGGAACGCTCTGGGCCTTGGCCTACAGTaGCTACCACTGTGGTCACCTTCCCGCTGTCACGGCCCAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QCKPLLGNALGLGLQ*LPLWSPSRCHGPAS Trigger: TGAAGCTGGGCCGTGACAGCGGGAAGGTGACCACAGTGGTAGCCACTGTAGGCCAAGGCCCAGAGCGTTCCCAAGAAGTGGCTTACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | CTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGCGCAGCCTCACAATATaGCAGTGGTCCAGCTTACGC | + |
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Preference number: 5 (lower is better) Translates to: LYSPPSRMGRGRKPWEQRRSLTI*QWSSLR Trigger: GCGTAAGCTGGACCACTGCAATATTGTGAGGCTGCG...CCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | CTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAGCCTTGGGAGCAGAGGCCCGAACCAGCTGCTTaGCACTGCCAAAATCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LYSPPSRMGRGRKPWEQRPEPAA*HCQNRR Trigger: TCTGCGATTTTGGCAGTGCAAAGCAGCTGGTTCGGG...CCTCTGCTCCCAAGGCTTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGGTAGTTCATTTACCTCTGCCCTCTAGTCTAGGGGCCCAGCCAGGGCAGACGGTGACACACACCTaGGGAGTGGATGTAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: LGVVHLPLPSSLGAQPGQTVTHT*GVDVGQ Trigger: TTGGCCTACATCCACTCCCAAGGTGTGTGTCACCGT...CTGCCCTGGCTGGGCCCCTAGACTAGAGGGCAGAGGTAAATGAACTACCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS TCA 90 bp | AATCTTGGCCAGTCTGAGCTTGTGAGGATGGGTTGTAGGAAGTGGTaGGGGGAGAAGCAGGGCCTGCTGGGGACCTCAAGTGAGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: NLGQSELVRMGCRKW*GEKQGLLGTSSEEG Trigger: TCCCTCCTCACTTGAGGTCCCCAGCAGGCCCTGCTTCTCCCCTCACCACTTCCTACAACCCATCCTCACAAGCTCAGACTGGCCAAGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108411.2 |
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| CDS CCA 90 bp | TGTTCCCTGGTTGGCGTTCCTAGTACCTTGATGATCTCCACAAGCTaGTCCACCCCACTGTCCCCAGGGAAGATGGGCTGGCCGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: CSLVGVPSTLMISTS*STPLSPGKMGWPRS Trigger: ACTTCTCGGCCAGCCCATCTTCCCTGGGGACAGTGGGGTGGACCAGCTTGTGGAGATCATCAAGGTACTAGGAACGCCAACCAGGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | GGGGCCAGGGAAGGGAAGACGAGAGATGGGCTGGGCTGGTTCTATTTACAAGGGAGTGTAAGCCACTTCTaGGGAACGCTCTGGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GAREGKTRDGLGWFYLQGSVSHF*GTLWAL Trigger: CAAGGCCCAGAGCGTTCCCAAGAAGTGGCTTACACT...CCCTTGTAAATAGAACCAGCCCAGCCCATCTCTCGTCTTCCCTTCCCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | AGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAAACGGTGACACACACCTaGGGAGTGGATGTAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: RHQGLSLLPSFQDGEREETVTHT*GVDVGQ Trigger: TTGGCCTACATCCACTCCCAAGGTGTGTGTCACCGT...TTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | AGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGATGGGGAGAGGGAGGAACCCGAACCAGCTGCTTaGCACTGCCAAAATCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RHQGLSLLPSFQDGEREEPEPAA*HCQNRR Trigger: TCTGCGATTTTGGCAGTGCAAAGCAGCTGGTTCGGG...TTCCTCCCTCTCCCCATCCTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS TCA 90 bp | TCTGAGCTTCAGTTAAAGCTTGTGAGGATGGGTTGTAGGAAGTGGTaGGGGGAGAAGCAGGGCCTGCTGGGGACCTCAAGTGAGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: SELQLKLVRMGCRKW*GEKQGLLGTSSEEG Trigger: TCCCTCCTCACTTGAGGTCCCCAGCAGGCCCTGCTTCTCCCCTCACCACTTCCTACAACCCATCCTCACAAGCTTTAACTGAAGCTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071739.12 |
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| CDS-3UTR CAA 90 bp | CAGGGAAGGGAAGACGAGAGATGGGCTGGGCTGGTTCTATTTACAAGGGACCTGGTTCATCTCTCGGATTaGTTCCCTGGTTGGCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: QGREDERWAGLVLFTRDLVHLSD*FPGWRS Trigger: GGAACGCCAACCAGGGAACAAATCCGAGAGATGAAC...CAGGTCCCTTGTAAATAGAACCAGCCCAGCCCATCTCTCGTCTTCCCTTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | ACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTCTACTCCCCTCCTTCCAGGTTCATCTCTCGGATTaGTTCCCTGGTTGGCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: TLLWKLRHQGLSLLPSFQVHLSD*FPGWRS Trigger: GGAACGCCAACCAGGGAACAAATCCGAGAGATGAAC...CTGGAAGGAGGGGAGTAGAGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGTACACAGGCAAACCTTACTGTGGAAACTAAGACACCAGGGACTCTCTAGTGTAAGCCACTTCTaGGGAACGCTCTGGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RSVHRQTLLWKLRHQGLSSVSHF*GTLWAL Trigger: CAAGGCCCAGAGCGTTCCCAAGAAGTGGCTTACACT...AGAGAGTCCCTGGTGTCTTAGTTTCCACAGTAAGGTTTGCCTGTGTACAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS CCA 72 bp | CCACTTCTTGGGAACGCTCTGGGCCTTGGCCTACAGTaGCTACCACTGTGGTCACCTTCCCGCTGTCACGGC | + |
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Preference number: 6 (lower is better) Translates to: PLLGNALGLGLQ*LPLWSPSRCHG Trigger: GCCGTGACAGCGGGAAGGTGACCACAGTGGTAGCCACTGTAGGCCAAGGCCCAGAGCGTTCCCAAGAAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS CCA 72 bp | CCACAAGCTGGTCCACCCCACTGTCCCCAGGGAAGATaGGCTGGCCGAGAAGTAGCTCAGCAAGTACACAGC | + |
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Preference number: 6 (lower is better) Translates to: PQAGPPHCPQGR*AGREVAQQVHS Trigger: GCTGTGTACTTGCTGAGCTACTTCTCGGCCAGCCCATCTTCCCTGGGGACAGTGGGGTGGACCAGCTTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS CCA 72 bp | TGGGCTCCGAGTCTCCGCAGTTCATCGAAGAAGCTGTaGGCACAAGCCTCGAGTGGGGAGAGCCTTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: WAPSLRSSSKKL*AQASSGESLED Trigger: ATCCTCAAGGCTCTCCCCACTCGAGGCTTGTGCCCACAGCTTCTTCGATGAACTGCGGAGACTCGGAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS TCA 72 bp | CAGTCTGAGCTTGTGAGGATGGGTTGTAGGAAGTGGTaGGGGGAGAAGCAGGGCCTGCTGGGGACCTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: QSELVRMGCRKW*GEKQGLLGTSS Trigger: ACTTGAGGTCCCCAGCAGGCCCTGCTTCTCCCCTCACCACTTCCTACAACCCATCCTCACAAGCTCAGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108411.2 |
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| CDS CCA 72 bp | GTTGGCGTTCCTAGTACCTTGATGATCTCCACAAGCTaGTCCACCCCACTGTCCCCAGGGAAGATGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VGVPSTLMISTS*STPLSPGKMGW Trigger: CCAGCCCATCTTCCCTGGGGACAGTGGGGTGGACCAGCTTGTGGAGATCATCAAGGTACTAGGAACGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS CAA 72 bp | GTCAGTGTAAGCCACTTCTTGGGAACGCTCTGGGCCTaGGCCTACAGTGGCTACCACTGTGGTCACCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: VSVSHFLGTLWA*AYSGYHCGHLP Trigger: GGGAAGGTGACCACAGTGGTAGCCACTGTAGGCCAAGGCCCAGAGCGTTCCCAAGAAGTGGCTTACACTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS CAA 90 bp | CACTTTGATGTCAGTGTAAGCCACTTCTTGGGAACGCTCTGGGCCTaGGCCTACAGTGGCTACCACTGTGGTCACCTTCCCGCTGTCACG | + |
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Preference number: 6 (lower is better) Translates to: HFDVSVSHFLGTLWA*AYSGYHCGHLPAVT Trigger: CGTGACAGCGGGAAGGTGACCACAGTGGTAGCCACTGTAGGCCAAGGCCCAGAGCGTTCCCAAGAAGTGGCTTACACTGACATCAAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS TCA 72 bp | CAGTTAAAGCTTGTGAGGATGGGTTGTAGGAAGTGGTaGGGGGAGAAGCAGGGCCTGCTGGGGACCTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: QLKLVRMGCRKW*GEKQGLLGTSS Trigger: ACTTGAGGTCCCCAGCAGGCCCTGCTTCTCCCCTCACCACTTCCTACAACCCATCCTCACAAGCTTTAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071739.12 |
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| CDS CCA 72 bp | TTTGATGTCAGTGTAAGCCACTTCTTGGGAACGCTCTaGGCCTTGGCCTACAGTGGCTACCACTGTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: FDVSVSHFLGTL*ALAYSGYHCGH Trigger: GTGACCACAGTGGTAGCCACTGTAGGCCAAGGCCCAGAGCGTTCCCAAGAAGTGGCTTACACTGACATCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS CAA 72 bp | CGAACCAGCTGCTTTGCACTGCCAAAATCGCAGAGCTaGAGGACAGCAGTGTCAGGGTCCACAAGCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: RTSCFALPKSQS*RTAVSGSTSKF Trigger: GAATTTGCTTGTGGACCCTGACACTGCTGTCCTCAAGCTCTGCGATTTTGGCAGTGCAAAGCAGCTGGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS CAA 72 bp | ATTACCAATCACTTTGATGTCAGTGTAAGCCACTTCTaGGGAACGCTCTGGGCCTTGGCCTACAGTGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: ITNHFDVSVSHF*GTLWALAYSGY Trigger: GTAGCCACTGTAGGCCAAGGCCCAGAGCGTTCCCAAGAAGTGGCTTACACTGACATCAAAGTGATTGGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS TCA 72 bp | GCTAGAGCAGAGTGCAATGGCCTCAGGTGGTGTCTTTaGAGATTTGAACACCTTTGTCCAAGGGTGAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ARAECNGLRWCL*RFEHLCPRVSF Trigger: AAAGCTCACCCTTGGACAAAGGTGTTCAAATCTTCAAAGACACCACCTGAGGCCATTGCACTCTGCTCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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| CDS CCA 72 bp | CCAGATTCAAATACAGCTCGTCCTTCTTCTCCCCACTaGAGTAGAAAAAGTACCGCAGCCTCACAATATTGC | + |
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Preference number: 6 (lower is better) Translates to: PDSNTARPSSPH*SRKSTAASQYC Trigger: GCAATATTGTGAGGCTGCGGTACTTTTTCTACTCCAGTGGGGAGAAGAAGGACGAGCTGTATTTGAATCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071739.12 ENSMUST00000108411.2 |
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