Pregenerated sensors for GSG1L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000097886Ensembl transcript IDs: ENSMUST00000181566.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTGTTGCCCTTAATACTTTCATGATCCCACTTTCTTTGGGATATTaGTTAAACTCAGAGTCAGAGAAACGACAATGTTCCTTTATAGTG | + |
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Preference number: 1 (lower is better) Translates to: IVALNTFMIPLSLGY*LNSESEKRQCSFIV Trigger: CACTATAAAGGAACATTGTCGTTTCTCTGACTCTGAGTTTAATCAATATCCCAAAGAAAGTGGGATCATGAAAGTATTAAGGGCAACAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| 3UTR CCA 72 bp | GTCCAGAGAGGGGTAGTGGAAAGTTTACCTATACTGTaGTCTTCTGAACTCCACTCCAGGGGTGTTCATTGT | + |
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Preference number: 3 (lower is better) Translates to: VQRGVVESLPIL*SSELHSRGVHC Trigger: ACAATGAACACCCCTGGAGTGGAGTTCAGAAGACCACAGTATAGGTAAACTTTCCACTACCCCTCTCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| 3UTR TCA 72 bp | CTTAATACTTTCATGATCCCACTTTCTTTGGGATATTaGTTAAACTCAGAGTCAGAGAAACGACAATGTTCC | + |
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Preference number: 3 (lower is better) Translates to: LNTFMIPLSLGY*LNSESEKRQCS Trigger: GGAACATTGTCGTTTCTCTGACTCTGAGTTTAATCAATATCCCAAAGAAAGTGGGATCATGAAAGTATTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR TCA 90 bp | GGTCTTCTGAACTCCACTCCAGGGGTGTTCATTGTGGTAATAAATGCCCGGCTCTTGCCAAACCTTCCGTaGAGGTCCAGGCTGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GLLNSTPGVFIVVINARLLPNLP*RSRLWG Trigger: ACCCCACAGCCTGGACCTTCACGGAAGGTTTGGCAA...GAGCCGGGCATTTATTACCACAATGAACACCCCTGGAGTGGAGTTCAGAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CCA 90 bp | CAGAGAGGGGTAGTGGAAAGTTTACCTATACTGTGGTCTTCTGAACTCCACTCCCAAGGGCCAGGCAGATaGGGAGGAGGGTCAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: QRGVVESLPILWSSELHSQGPGR*GGGSAS Trigger: GGATGCTGACCCTCCTCCCCATCTGCCTGGCCCTTG...GGAGTGGAGTTCAGAAGACCACAGTATAGGTAAACTTTCCACTACCCCTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR TCA 90 bp | CAGAGAGGGGTAGTGGAAAGTTTACCTATACTGTGGTCTTCTGAACTCCACTCCCTGGACCGGCTGAAGTaGATGCAGTTCAAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: QRGVVESLPILWSSELHSLDRLK*MQFKPP Trigger: CGGGGGCTTGAACTGCATTCACTTCAGCCGGTCCAG...GGAGTGGAGTTCAGAAGACCACAGTATAGGTAAACTTTCCACTACCCCTCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR TCA 90 bp | TCCACTCCAGGGGTGTTCATTGTGGTAATAAATGCCCGGCTCATCCACACATGCGCTCACCTGTGCTGTTaGGGCTTTCCTCACAGGACT | + |
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Preference number: 4 (lower is better) Translates to: STPGVFIVVINARLIHTCAHLCC*GFPHRT Trigger: AGTCCTGTGAGGAAAGCCTCAACAGCACAGGTGAGC...GCATGTGTGGATGAGCCGGGCATTTATTACCACAATGAACACCCCTGGAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CCA 90 bp | CTGAACTCCACTCCAGGGGTGTTCATTGTGGTAATAAATGCCCGGCTCATCCACGTCTCCCAGATGTACTaGACAGCCTGGCTGTCATCG | + |
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Preference number: 4 (lower is better) Translates to: LNSTPGVFIVVINARLIHVSQMY*TAWLSS Trigger: CGATGACAGCCAGGCTGTCCAGTACATCTGGGAGAC...GTGGATGAGCCGGGCATTTATTACCACAATGAACACCCCTGGAGTGGAGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR GCA 90 bp | GGGGTAGTGGAAAGTTTACCTATACTGTGGTCTTCTGAACTCCACTCCAGGGGTTCATGTGAGCCACCATaGCCAGGAGTCCTGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: GVVESLPILWSSELHSRGSCEPP*PGVLQA Trigger: TGCTTGCAGGACTCCTGGGCATGGTGGCTCACATGA...ACCCCTGGAGTGGAGTTCAGAAGACCACAGTATAGGTAAACTTTCCACTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTTCTGAACTCCACTCCAGGGGTGTTCATTGTGGTAATAAATGCCCGGCTTGGACCACCTTTCTGTaGCCTTGGCACCTCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: WSSELHSRGVHCGNKCPAWTTFL*PWHLCL Trigger: CAAGCAGAGGTGCCAAGGGCACAGAAAGGTGGTCCA...AGCCGGGCATTTATTACCACAATGAACACCCCTGGAGTGGAGTTCAGAAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTTCTGAACTCCACTCCAGGGGTGTTCATTGTGGTAATAAATGCCCGGCTCTTGGCACCTCTGCTTaGGCTGTGGTGTATCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: WSSELHSRGVHCGNKCPALGTSA*AVVYLL Trigger: GAGCAGATACACCACAGCCCAAGCAGAGGTGCCAAG...AGCCGGGCATTTATTACCACAATGAACACCCCTGGAGTGGAGTTCAGAAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTTCTGAACTCCACTCCAGGGGTGTTCATTGTGGTAATAAATGCCCGGCTACCTTTCTGTGCCCTTaGCACCTCTGCTTGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: WSSELHSRGVHCGNKCPATFLCP*HLCLGC Trigger: ACAGCCCAAGCAGAGGTGCCAAGGGCACAGAAAGGT...AGCCGGGCATTTATTACCACAATGAACACCCCTGGAGTGGAGTTCAGAAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CCA 90 bp | GGGGTAGTGGAAAGTTTACCTATACTGTGGTCTTCTGAACTCCACTCCAGGGGTATGTGTCCCACAGGATaGGGAGTCGCTCCTGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: GVVESLPILWSSELHSRGMCPTG*GVAPVC Trigger: GCAAACAGGAGCGACTCCCCATCCTGTGGGACACAT...ACCCCTGGAGTGGAGTTCAGAAGACCACAGTATAGGTAAACTTTCCACTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CCA 90 bp | GGTCTTCTGAACTCCACTCCAGGGGTGTTCATTGTGGTAATAAATGCCCGGCTCAGACTTCAGCCCCAATaGAGAGCCATAAAACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GLLNSTPGVFIVVINARLRLQPQ*RAIKLL Trigger: AAGGAGTTTTATGGCTCTCCATTGGGGCTGAAGTCT...GAGCCGGGCATTTATTACCACAATGAACACCCCTGGAGTGGAGTTCAGAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR TCA 90 bp | AGAGTCAGAGAAACGACAATGTTCCTTTATAGTGGGGTGTTAATAGTTGATATCCTGAGGCGTCCACGTTaGGCCAGCTGCATCCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RVRETTMFLYSGVLIVDILRRPR*ASCIRN Trigger: GTTCCGGATGCAGCTGGCTCAACGTGGACGCCTCAG...GATATCAACTATTAACACCCCACTATAAAGGAACATTGTCGTTTCTCTGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR TCA 90 bp | GGTCTTCTGAACTCCACTCCAGGGGTGTTCATTGTGGTAATAAATGCCCGGCTCAGGTTCACGGTGATTTaGAAACTAGTTGTGTACATC | + |
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Preference number: 4 (lower is better) Translates to: GLLNSTPGVFIVVINARLRFTVI*KLVVYI Trigger: GATGTACACAACTAGTTTTCAAATCACCGTGAACCT...GAGCCGGGCATTTATTACCACAATGAACACCCCTGGAGTGGAGTTCAGAAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR TCA 90 bp | GGGATATTGATTAAACTCAGAGTCAGAGAAACGACAATGTTCCTTTATAGTGGGGCCCAGGAACATTCGTaGAGATGTGTCCCACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GILIKLRVRETTMFLYSGAQEHS*RCVPQD Trigger: ATCCTGTGGGACACATCTTCACGAATGTTCCTGGGC...CCCACTATAAAGGAACATTGTCGTTTCTCTGACTCTGAGTTTAATCAATATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR GCA 90 bp | AGAGTCAGAGAAACGACAATGTTCCTTTATAGTGGGGTGTTAATAGTTGATATCCATGCCCAGGAGTCCTaGAAGCACCATGAGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: RVRETTMFLYSGVLIVDIHAQES*KHHEDS Trigger: GCTATCCTCATGGTGCTTGCAGGACTCCTGGGCATG...GATATCAACTATTAACACCCCACTATAAAGGAACATTGTCGTTTCTCTGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CCA 90 bp | AGAGTCAGAGAAACGACAATGTTCCTTTATAGTGGGGTGTTAATAGTTGATATCGTTGTGCTGAGGGTATaGACCACCTTTCTGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RVRETTMFLYSGVLIVDIVVLRV*TTFLCP Trigger: AGGGCACAGAAAGGTGGTCCATACCCTCAGCACAAC...GATATCAACTATTAACACCCCACTATAAAGGAACATTGTCGTTTCTCTGACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CCA 90 bp | AGAGTCAGAGAAACGACAATGTTCCTTTATAGTGGGGTGTTAATAGTTGATATCATGTACTGGACAGCCTaGCTGTCATCGTGCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: RVRETTMFLYSGVLIVDIMYWTA*LSSCLL Trigger: CAGTAAGCACGATGACAGCCAGGCTGTCCAGTACAT...GATATCAACTATTAACACCCCACTATAAAGGAACATTGTCGTTTCTCTGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS TCA 90 bp | CGGGTACTATCCCCAGGAAGCACCTGCACCGCTCACCTGTGCTGTTaGGGCTTTCCTCACAGGACTGCCAAAGCCCCGCATGGAACCTGC | + |
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Preference number: 5 (lower is better) Translates to: RVLSPGSTCTAHLCC*GFPHRTAKAPHGTC Trigger: GCAGGTTCCATGCGGGGCTTTGGCAGTCCTGTGAGGAAAGCCTCAACAGCACAGGTGAGCGGTGCAGGTGCTTCCTGGGGATAGTACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 90 bp | GGGGGCGGGTGCCCAGGAACATTCGTGAAGATGTGTCCCACAGGATaGGGAGTCGCTCCTGTTTGCCAAACCTTCCGTGAAGGTCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GGGCPGTFVKMCPTG*GVAPVCQTFREGPG Trigger: GCCTGGACCTTCACGGAAGGTTTGGCAAACAGGAGCGACTCCCCATCCTGTGGGACACATCTTCACGAATGTTCCTGGGCACCCGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS TCA 90 bp | GTGTCCCACAGGATGGGGAGTCGCTCCTGTTTGCCAAACCTTCCGTaGAGGTCCAGGCTGTGGGGTGTTGTGCTGAGGGTATGGACCACC | + |
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Preference number: 5 (lower is better) Translates to: VSHRMGSRSCLPNLP*RSRLWGVVLRVWTT Trigger: GGTGGTCCATACCCTCAGCACAACACCCCACAGCCTGGACCTTCACGGAAGGTTTGGCAAACAGGAGCGACTCCCCATCCTGTGGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS TCA 90 bp | ACACTTTGCCTCCTGTACCTGGGGGCGGGTGCCCAGGAACATTCGTaGAGATGTGTCCCACAGGATGGGGAGTCGCTCCTGTTTGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: TLCLLYLGAGAQEHS*RCVPQDGESLLFAK Trigger: TTTGGCAAACAGGAGCGACTCCCCATCCTGTGGGACACATCTTCACGAATGTTCCTGGGCACCCGCCCCCAGGTACAGGAGGCAAAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 90 bp | AACCTGCGTTGGATAAACTTGTCGTCCCCTGTCTCCCAGATGTACTaGACAGCCTGGCTGTCATCGTGCTTACTGCCCGTGCTGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: NLRWINLSSPVSQMY*TAWLSSCLLPVLLL Trigger: CAGCAGCAGCACGGGCAGTAAGCACGATGACAGCCAGGCTGTCCAGTACATCTGGGAGACAGGGGACGACAAGTTTATCCAACGCAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 90 bp | CCTGTGCTGTTGAGGCTTTCCTCACAGGACTGCCAAAGCCCCGCATaGAACCTGCGTTGGATAAACTTGTCGTCCCCTGTCTCCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: PVLLRLSSQDCQSPA*NLRWINLSSPVSQM Trigger: CATCTGGGAGACAGGGGACGACAAGTTTATCCAACGCAGGTTCCATGCGGGGCTTTGGCAGTCCTGTGAGGAAAGCCTCAACAGCACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 90 bp | TCTGTGCCCTTGGCACCTCTGCTTGGGCTGTGGTGTATCTGCTCATaGTCGCCACTGAAACAGCCATACAGAGAGCAAAAGATCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SVPLAPLLGLWCICS*SPLKQPYREQKIPR Trigger: CCTGGGGATCTTTTGCTCTCTGTATGGCTGTTTCAGTGGCGACCATGAGCAGATACACCACAGCCCAAGCAGAGGTGCCAAGGGCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CAA 90 bp | GGTCTTCTGAACTCCACTCCAGGGGTGTTCATTGTGGTAATAAATGCCCGGCTCCCTTGGCACCTCTGCTaGGGCTGTGGTGTATCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GLLNSTPGVFIVVINARLPWHLC*GCGVSA Trigger: AGCAGATACACCACAGCCCAAGCAGAGGTGCCAAGG...GAGCCGGGCATTTATTACCACAATGAACACCCCTGGAGTGGAGTTCAGAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS GCA 90 bp | CACCTTTCTGTGCCCTTGGCACCTCTGCTTGGGCTGTGGTGTATCTaGTCATGGTCGCCACTGAAACAGCCATACAGAGAGCAAAAGATC | + |
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Preference number: 5 (lower is better) Translates to: HLSVPLAPLLGLWCI*SWSPLKQPYREQKI Trigger: GATCTTTTGCTCTCTGTATGGCTGTTTCAGTGGCGACCATGAGCAGATACACCACAGCCCAAGCAGAGGTGCCAAGGGCACAGAAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS TCA 90 bp | TGGCACCTCTGCTTGGGCTGTGGTGTATCTGCTCATGGTCGCCACTaGAACAGCCATACAGAGAGCAAAAGATCCCCAGGCAAGACAATA | + |
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Preference number: 5 (lower is better) Translates to: WHLCLGCGVSAHGRH*NSHTESKRSPGKTI Trigger: TATTGTCTTGCCTGGGGATCTTTTGCTCTCTGTATGGCTGTTTCAGTGGCGACCATGAGCAGATACACCACAGCCCAAGCAGAGGTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS-3UTR CAA 90 bp | CATGATCCCACTTTCTTTGGGATATTGATTAAACTCAGAGTCAGAGAAACGACACACCTTTCTGTGCCCTaGGCACCTCTGCTTGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HDPTFFGILIKLRVRETTHLSVP*APLLGL Trigger: CAGCCCAAGCAGAGGTGCCAAGGGCACAGAAAGGTG...TGTCGTTTCTCTGACTCTGAGTTTAATCAATATCCCAAAGAAAGTGGGATCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS TCA 72 bp | CTCCTGTACCTGGGGGCGGGTGCCCAGGAACATTCGTaGAGATGTGTCCCACAGGATGGGGAGTCGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLYLGAGAQEHS*RCVPQDGESLL Trigger: CAGGAGCGACTCCCCATCCTGTGGGACACATCTTCACGAATGTTCCTGGGCACCCGCCCCCAGGTACAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS GCA 72 bp | GTCTCCCAGATGTACTGGACAGCCTGGCTGTCATCGTaGTTACTGCCCGTGCTGCTGCTGGACCGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VSQMYWTAWLSS*LLPVLLLDRLK Trigger: CTTCAGCCGGTCCAGCAGCAGCACGGGCAGTAAGCACGATGACAGCCAGGCTGTCCAGTACATCTGGGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS TCA 72 bp | ACCTTCCGTGAAGGTCCAGGCTGTGGGGTGTTGTGCTaGGGGTATGGACCACCTTTCTGTGCCCTTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: TFREGPGCGVLC*GYGPPFCALGT Trigger: GGTGCCAAGGGCACAGAAAGGTGGTCCATACCCTCAGCACAACACCCCACAGCCTGGACCTTCACGGAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 72 bp | AGAGGTTTTGTCATTCGTCGGATCCCCTCGCACCAGTaGCTGCTGCCCATGGCTGTGAGGGAGAAGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: RGFVIRRIPSHQ*LLPMAVREKAR Trigger: CCTTGCCTTCTCCCTCACAGCCATGGGCAGCAGCCACTGGTGCGAGGGGATCCGACGAATGACAAAACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 72 bp | TTGTCGTCCCCTGTCTCCCAGATGTACTGGACAGCCTaGCTGTCATCGTGCTTACTGCCCGTGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSPVSQMYWTA*LSSCLLPVLLL Trigger: CAGCAGCAGCACGGGCAGTAAGCACGATGACAGCCAGGCTGTCCAGTACATCTGGGAGACAGGGGACGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CAA 90 bp | GCTGTGGGGTGTTGTGCTGAGGGTATGGACCACCTTTCTGTGCCCTaGGCACCTCTGCTTGGGCTGTGGTGTATCTGCTCATGGTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: AVGCCAEGMDHLSVP*APLLGLWCICSWSP Trigger: TGGCGACCATGAGCAGATACACCACAGCCCAAGCAGAGGTGCCAAGGGCACAGAAAGGTGGTCCATACCCTCAGCACAACACCCCACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS TCA 72 bp | AGGATGGGGAGTCGCTCCTGTTTGCCAAACCTTCCGTaGAGGTCCAGGCTGTGGGGTGTTGTGCTGAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: RMGSRSCLPNLP*RSRLWGVVLRV Trigger: TACCCTCAGCACAACACCCCACAGCCTGGACCTTCACGGAAGGTTTGGCAAACAGGAGCGACTCCCCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS GCA 72 bp | AGGGTATGGACCACCTTTCTGTGCCCTTGGCACCTCTaGTTGGGCTGTGGTGTATCTGCTCATGGTCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RVWTTFLCPWHL*LGCGVSAHGRH Trigger: GTGGCGACCATGAGCAGATACACCACAGCCCAAGCAGAGGTGCCAAGGGCACAGAAAGGTGGTCCATACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS GCA 72 bp | AAGATGTGTCCCACAGGATGGGGAGTCGCTCCTGTTTaGCAAACCTTCCGTGAAGGTCCAGGCTGTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: KMCPTGWGVAPV*QTFREGPGCGV Trigger: CACCCCACAGCCTGGACCTTCACGGAAGGTTTGGCAAACAGGAGCGACTCCCCATCCTGTGGGACACATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CAA 72 bp | AGTTCAAGCCCCCGAGGAGATCCTGGCATAGAGGTTTaGTCATTCGTCGGATCCCCTCGCACCAGTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSPRGDPGIEV*SFVGSPRTSGC Trigger: GCAGCCACTGGTGCGAGGGGATCCGACGAATGACAAAACCTCTATGCCAGGATCTCCTCGGGGGCTTGAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CAA 90 bp | TCACAGGACTGCCAAAGCCCCGCATGGAACCTGCGTTGGATAAACTaGTCGTCCCCTGTCTCCCAGATGTACTGGACAGCCTGGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SQDCQSPAWNLRWIN*SSPVSQMYWTAWLS Trigger: TGACAGCCAGGCTGTCCAGTACATCTGGGAGACAGGGGACGACAAGTTTATCCAACGCAGGTTCCATGCGGGGCTTTGGCAGTCCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS GCA 72 bp | CGCTCACCTGTGCTGTTGAGGCTTTCCTCACAGGACTaGCAAAGCCCCGCATGGAACCTGCGTTGGATAAAC | + |
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Preference number: 6 (lower is better) Translates to: RSPVLLRLSSQD*QSPAWNLRWIN Trigger: GTTTATCCAACGCAGGTTCCATGCGGGGCTTTGGCAGTCCTGTGAGGAAAGCCTCAACAGCACAGGTGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS GCA 72 bp | GTGCCCTTGGCACCTCTGCTTGGGCTGTGGTGTATCTaGTCATGGTCGCCACTGAAACAGCCATACAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VPLAPLLGLWCI*SWSPLKQPYRE Trigger: CTCTCTGTATGGCTGTTTCAGTGGCGACCATGAGCAGATACACCACAGCCCAAGCAGAGGTGCCAAGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 72 bp | TGGATAAACTTGTCGTCCCCTGTCTCCCAGATGTACTaGACAGCCTGGCTGTCATCGTGCTTACTGCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: WINLSSPVSQMY*TAWLSSCLLPV Trigger: CACGGGCAGTAAGCACGATGACAGCCAGGCTGTCCAGTACATCTGGGAGACAGGGGACGACAAGTTTATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 72 bp | TCACAGGACTGCCAAAGCCCCGCATGGAACCTGCGTTaGATAAACTTGTCGTCCCCTGTCTCCCAGATGTAC | + |
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Preference number: 6 (lower is better) Translates to: SQDCQSPAWNLR*INLSSPVSQMY Trigger: GTACATCTGGGAGACAGGGGACGACAAGTTTATCCAACGCAGGTTCCATGCGGGGCTTTGGCAGTCCTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 72 bp | TTGAGGCTTTCCTCACAGGACTGCCAAAGCCCCGCATaGAACCTGCGTTGGATAAACTTGTCGTCCCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LRLSSQDCQSPA*NLRWINLSSPV Trigger: GACAGGGGACGACAAGTTTATCCAACGCAGGTTCCATGCGGGGCTTTGGCAGTCCTGTGAGGAAAGCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 72 bp | TATGGACCACCTTTCTGTGCCCTTGGCACCTCTGCTTaGGCTGTGGTGTATCTGCTCATGGTCGCCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: YGPPFCALGTSA*AVVYLLMVATE Trigger: TTCAGTGGCGACCATGAGCAGATACACCACAGCCCAAGCAGAGGTGCCAAGGGCACAGAAAGGTGGTCCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CAA 72 bp | CTCACAGGACTGCCAAAGCCCCGCATGGAACCTGCGTaGGATAAACTTGTCGTCCCCTGTCTCCCAGATGTA | + |
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Preference number: 6 (lower is better) Translates to: LTGLPKPRMEPA*DKLVVPCLPDV Trigger: TACATCTGGGAGACAGGGGACGACAAGTTTATCCAACGCAGGTTCCATGCGGGGCTTTGGCAGTCCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 72 bp | TTGGCACCTCTGCTTGGGCTGTGGTGTATCTGCTCATaGTCGCCACTGAAACAGCCATACAGAGAGCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LAPLLGLWCICS*SPLKQPYREQK Trigger: CTTTTGCTCTCTGTATGGCTGTTTCAGTGGCGACCATGAGCAGATACACCACAGCCCAAGCAGAGGTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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| CDS CCA 72 bp | TCAGTATCAGGAAGATATCCAAGACTTCAGCCCCAATaGAGAGCCATAAAACTCCTTGTCCCTCGGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: SVSGRYPRLQPQ*RAIKLLVPRRV Trigger: TACCCGCCGAGGGACAAGGAGTTTTATGGCTCTCCATTGGGGCTGAAGTCTTGGATATCTTCCTGATACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181566.2 |
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