Pregenerated sensors for GSDME (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029821Ensembl transcript IDs: ENSMUST00000031845.13, ENSMUST00000101405.10, ENSMUST00000165099.8, ENSMUST00000167893.2, ENSMUST00000170142.8
Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACACCTTTATCCGAGCACTTGGGAGGCAGAGGAGGTGGGTCTCTaGGTTCAAGGCCAGCCTGGTCTACAGATCAGGTTCTGGGGTAGC | + |
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Preference number: 1 (lower is better) Translates to: THLYPSTWEAEEVGL*VQGQPGLQIRFWGS Trigger: GCTACCCCAGAACCTGATCTGTAGACCAGGCTGGCCTTGAACTCAGAGACCCACCTCCTCTGCCTCCCAAGTGCTCGGATAAAGGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR CCA 90 bp | TTCTGTGTGGAACACCTTCAGAACAGTCCTGGGAGGCAGGCTGGCTaGCTTTCAAACATGAGCACACACACATGCATTAGCCTAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: FCVEHLQNSPGRQAG*LSNMSTHTCISLEE Trigger: TTCCTCTAGGCTAATGCATGTGTGTGTGCTCATGTTTGAAAGCCAGCCAGCCTGCCTCCCAGGACTGTTCTGAAGGTGTTCCACACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR GCA 90 bp | CCTGGGAGGCAGGCTGGCTGGCTTTCAAACATGAGCACACACACATaGATTAGCCTAGAGGAAAAGTGTTACTTGTTTTACCAGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: PGRQAGWLSNMSTHT*ISLEEKCYLFYQQW Trigger: CCACTGCTGGTAAAACAAGTAACACTTTTCCTCTAGGCTAATGCATGTGTGTGTGCTCATGTTTGAAAGCCAGCCAGCCTGCCTCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR CCA 90 bp | TTTCCTCTTACTGTCTTTCTGTGTGGAACACCTTCAGAACAGTCCTaGGAGGCAGGCTGGCTGGCTTTCAAACATGAGCACACACACATG | + |
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Preference number: 1 (lower is better) Translates to: FPLTVFLCGTPSEQS*EAGWLAFKHEHTHM Trigger: CATGTGTGTGTGCTCATGTTTGAAAGCCAGCCAGCCTGCCTCCCAGGACTGTTCTGAAGGTGTTCCACACAGAAAGACAGTAAGAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR TCA 90 bp | ACCCAAGGTTGTTTCTCCTTCAGTCCCTGTAAAGTCGCCTCATTCTaGGGTGAAATAGCAGATGCTGAGCTGTTCTGGAATCCATGCCCA | + |
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Preference number: 1 (lower is better) Translates to: TQGCFSFSPCKVASF*GEIADAELFWNPCP Trigger: TGGGCATGGATTCCAGAACAGCTCAGCATCTGCTATTTCACCTCAGAATGAGGCGACTTTACAGGGACTGAAGGAGAAACAACCTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR TCA 90 bp | GTAGCATTTCTGGTTTCCCAGTCACCCAGTAGTGTACAGCATGTCTaGAGGATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTA | + |
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Preference number: 1 (lower is better) Translates to: VAFLVSQSPSSVQHV*RMGRKLLPCCIPSL Trigger: TAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACATGCTGTACACTACTGGGTGACTGGGAAACCAGAAATGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR TCA 90 bp | AAGATCTTTGATTACTTTCAGATTTGTAGATATTCTGGCCCTATATaGGGTTCTCTTAAGAGGCTTTGGCTCCACCTTGGAGCTGACACT | + |
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Preference number: 1 (lower is better) Translates to: KIFDYFQICRYSGPI*GSLKRLWLHLGADT Trigger: AGTGTCAGCTCCAAGGTGGAGCCAAAGCCTCTTAAGAGAACCTCATATAGGGCCAGAATATCTACAAATCTGAAAGTAATCAAAGATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR TCA 90 bp | GGTATGGCTTATTTTATTACTTGGTTTGTGTCCTTTGCTGCTGCTTaGATTTCTATGGGCTATGTTGTAAGGAGTGAGTGCCAAAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: GMAYFITWFVSFAAA*ISMGYVVRSECQKE Trigger: TTCCTTTTGGCACTCACTCCTTACAACATAGCCCATAGAAATTCAAGCAGCAGCAAAGGACACAAACCAAGTAATAAAATAAGCCATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR GCA 90 bp | AGGAGTGAGTGCCAAAAGGAAAGAGAAGTGTTGCATAAAAGATCTTaGTTGCTGGAGTTCCATGTCTTGAATGTCCAAATAGTATCTCTT | + |
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Preference number: 1 (lower is better) Translates to: RSECQKEREVLHKRS*LLEFHVLNVQIVSL Trigger: AAGAGATACTATTTGGACATTCAAGACATGGAACTCCAGCAAGCAAGATCTTTTATGCAACACTTCTCTTTCCTTTTGGCACTCACTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR TCA 90 bp | CTCACTTCATTTGAGTACACAGATAAGGTTTACTTCCTAGTGTTCTaGCCCATGGTATTTCTGGCAGCTAGTAAAAACTGCTTTGTTGAA | + |
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Preference number: 1 (lower is better) Translates to: LTSFEYTDKVYFLVF*PMVFLAASKNCFVE Trigger: TTCAACAAAGCAGTTTTTACTAGCTGCCAGAAATACCATGGGTCAGAACACTAGGAAGTAAACCTTATCTGTGTACTCAAATGAAGTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR TCA 90 bp | GATACTTTGAAACACTGCAGCTGTTTTCAGCAAACTTGGATCCAGTaGTTTAAGCTTCTGTCATTAACTGAGCACTATAAAAGCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: DTLKHCSCFQQTWIQ*FKLLSLTEHYKSFG Trigger: TCCAAAGCTTTTATAGTGCTCAGTTAATGACAGAAGCTTAAATCACTGGATCCAAGTTTGCTGAAAACAGCTGCAGTGTTTCAAAGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR GCA 90 bp | TTCTGGCCAAGGGCATTAGAATTTCTAATTATTTTCTTGGAACTGTaGCCCAAGATTTTATACCATAGCTTCTGTGATCTTTCCTTAACT | + |
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Preference number: 1 (lower is better) Translates to: FWPRALEFLIIFLEL*PKILYHSFCDLSLT Trigger: AGTTAAGGAAAGATCACAGAAGCTATGGTATAAAATCTTGGGGCACAGTTCCAAGAAAATAATTAGAAATTCTAATGCCCTTGGCCAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR CAA 90 bp | GAGAGACTAGCCGGGTGCAAGTGGCACACACCTTTATCCGAGCACTaGGGAGGCAGAGGAGGTGGGTCTCTGAGTTCAAGGCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ERLAGCKWHTPLSEH*GGRGGGSLSSRPAW Trigger: CCAGGCTGGCCTTGAACTCAGAGACCCACCTCCTCTGCCTCCCAAGTGCTCGGATAAAGGTGTGTGCCACTTGCACCCGGCTAGTCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGCAGTGGGCCTCTGATGAGAATAACCCATTGACAACGCTCGCAGCCATTACACCACCTCTGAGGTaGACTGGAATTCACTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SVQWASDENNPLTTLAAITPPLR*TGIHWQ Trigger: CTGCCAGTGAATTCCAGTGCACCTCAGAGGTGGTGT...AATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCTTTGGCTCCACCTTGGAGCTGACACTAATTCCCTTTCTGAATATTCTGGATGTGGCTGCAGTCTaGAAGGCAGTCTGGTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RGFGSTLELTLIPFLNILDVAAV*KAVWSA Trigger: GGCAGACCAGACTGCCTTCCAGACTGCAGCCACATC...CAGAATATTCAGAAAGGGAATTAGTGTCAGCTCCAAGGTGGAGCCAAAGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR TCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAATGGTTCTTCCCTCAGTaGCTCCAGTGTCAGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: DGKEIASLLHSQLMMDSEWFFPQ*LQCQCS Trigger: ACTGCACTGACACTGGAGTCACTGAGGGAAGAACCA...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATATGGTTCTTCCCTCAGTaGCTCCAGTGTCAGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: EIATCDKFPERTGIAPDIWFFPQ*LQCQCS Trigger: ACTGCACTGACACTGGAGTCACTGAGGGAAGAACCA...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATAACACCACCTCTGAGGTaGACTGGAATTCACTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EIATCDKFPERTGIAPDITPPLR*TGIHWQ Trigger: CTGCCAGTGAATTCCAGTGCACCTCAGAGGTGGTGT...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCTTTGGCTCCACCTTGGAGCTGACACTAATTCCCTTTCTGAATATTCTGAGTTCAAGGCCAGCCTaGTCTACAGATCAGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RGFGSTLELTLIPFLNILSSRPA*STDQVL Trigger: CAGAACCTGATCTGTAGACCAGGCTGGCCTTGAACT...CAGAATATTCAGAAAGGGAATTAGTGTCAGCTCCAAGGTGGAGCCAAAGCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTCCTTTTCCCTTCTTTGCTTTCAGGCATCTAGAAGAGTCAATAACTTTCCCTTCAGAACAGTCCTaGGAGGCAGGCTGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: CVPFPFFAFRHLEESITFPSEQS*EAGWLA Trigger: AGCCAGCCAGCCTGCCTCCCAGGACTGTTCTGAAGG...GAAAGTTATTGACTCTTCTAGATGCCTGAAAGCAAAGAAGGGAAAAGGAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCTACCATCTGGAGGAGGTGGGTCTCTaGGTTCAAGGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LEKFYQQSSLSTQYFYHLEEVGL*VQGQPG Trigger: ACCAGGCTGGCCTTGAACTCAGAGACCCACCTCCTC...CAGATGGTAGAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTCATTTAACCTTAGGCAATGGAGTATATTTACTGCCCTACAGTAGAGTTGGGAGGCAGAGGAGGTaGGTCTCTGAGTTCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: TSHLTLGNGVYLLPYSRVGRQRR*VSEFKA Trigger: GGCCTTGAACTCAGAGACCCACCTCCTCTGCCTCCC...AACTCTACTGTAGGGCAGTAAATATACTCCATTGCCTAAGGTTAAATGACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR CAA 90 bp | ACAGTGGCTGCACTGGGACAGGTGGGGTATGGCTTATTTTATTACTaGGTTTGTGTCCTTTGCTGCTGCTTGAATTTCTATGGGCTATGT | + |
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Preference number: 2 (lower is better) Translates to: TVAALGQVGYGLFYY*VCVLCCCLNFYGLC Trigger: ACATAGCCCATAGAAATTCAAGCAGCAGCAAAGGACACAAACCAAGTAATAAAATAAGCCATACCCCACCTGTCCCAGTGCAGCCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGCTTTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCGTACACACACATGCATaGGCTTTGGGAAGACACACG | + |
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Preference number: 2 (lower is better) Translates to: SAALEKFYQQSSLSTQYFVHTHA*ALGRHT Trigger: CGTGTGTCTTCCCAAAGCTCATGCATGTGTGTGTAC...GAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAAAGCAGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR GCA 90 bp | TCTATCCACTCAGTATTTCTACCATCTGGGTCCAACAGAAACAATAGCTACATACTGTTCTGGAATCCATaGCCAGGGTTAAGAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SIHSVFLPSGSNRNNSYILFWNP*PGLREL Trigger: GAGCTCTCTTAACCCTGGGCATGGATTCCAGAACAG...TATGTAGCTATTGTTTCTGTTGGACCCAGATGGTAGAAATACTGAGTGGATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR CAA 90 bp | AACATGAGCACACACACATGCATTAGCCTAGAGGAAAAGTGTTACTaGTTTTACCAGCAGTGGGAGTACAAACCACTGCTATTACATGCT | + |
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Preference number: 2 (lower is better) Translates to: NMSTHTCISLEEKCY*FYQQWEYKPLLLHA Trigger: AGCATGTAATAGCAGTGGTTTGTACTCCCACTGCTGGTAAAACAAGTAACACTTTTCCTCTAGGCTAATGCATGTGTGTGTGCTCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR-3UTR TCA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAAGTGTACAGCATGTCTaGAGGATGGGAAGGAAATTG | + |
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Preference number: 2 (lower is better) Translates to: LIEIATCDKFPERTGIAPSVQHV*RMGRKL Trigger: CAATTTCCTTCCCATCCTTCAGACATGCTGTACACT...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATCCACTCAGTATTTCTACCATCTGGGTCCAACAGAAACAATAGCTACATAACAGAATTACAGAGTTaGGGGTCCTACCTCCATAGC | + |
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Preference number: 2 (lower is better) Translates to: SIHSVFLPSGSNRNNSYITELQS*GSYLHS Trigger: GCTATGGAGGTAGGACCCTCAACTCTGTAATTCTGT...TATGTAGCTATTGTTTCTGTTGGACCCAGATGGTAGAAATACTGAGTGGATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR CCA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAAGCATGTCTGAAGGATaGGAAGGAAATTGCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LIEIATCDKFPERTGIAPSMSEG*EGNCFP Trigger: AGGGAAGCAATTTCCTTCCCATCCTTCAGACATGCT...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCTACCATCTGGATGCTGAGCTGTTCTaGAATCCATGCCCAGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: LEKFYQQSSLSTQYFYHLDAELF*NPCPGL Trigger: TAACCCTGGGCATGGATTCCAGAACAGCTCAGCATC...CAGATGGTAGAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR CAA 90 bp | ATTCTGGCCCTATATGAGGTTCTCTTAAGAGGCTTTGGCTCCACCTaGGAGCTGACACTAATTCCCTTTCTGAATATTCTGTTTATTAGA | + |
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Preference number: 2 (lower is better) Translates to: ILALYEVLLRGFGST*ELTLIPFLNILFIR Trigger: TCTAATAAACAGAATATTCAGAAAGGGAATTAGTGTCAGCTCCAAGGTGGAGCCAAAGCCTCTTAAGAGAACCTCATATAGGGCCAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR GCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAAAATCTGAGACTCTTCTaGTTTTGTACATCAGATAAG | + |
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Preference number: 2 (lower is better) Translates to: DGKEIASLLHSQLMMDSENLRLF*FCTSDK Trigger: CTTATCTGATGTACAAAAGCAGAAGAGTCTCAGATT...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATAGTTCTCATGTTGAGGTaGGTCAAATTAGATGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: EIATCDKFPERTGIAPDIVLMLR*VKLDVL Trigger: AAGAACATCTAATTTGACCCACCTCAACATGAGAAC...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGTTCCTTTTCCCTTCTTTGCTTTCAGGCATCTAGAAGAGTCAATAACTTTCCTATGTTGTAAGGAGTaGGTGCCAAAAGGAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CVPFPFFAFRHLEESITFLCCKE*VPKGKR Trigger: TCTCTTTCCTTTTGGCACTCACTCCTTACAACATAG...GAAAGTTATTGACTCTTCTAGATGCCTGAAAGCAAAGAAGGGAAAAGGAACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATAAATCTGAGACTCTTCTaGTTTTGTACATCAGATAAG | + |
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Preference number: 2 (lower is better) Translates to: EIATCDKFPERTGIAPDINLRLF*FCTSDK Trigger: CTTATCTGATGTACAAAAGCAGAAGAGTCTCAGATT...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR CAA 90 bp | AGTGAGTGCCAAAAGGAAAGAGAAGTGTTGCATAAAAGATCTTGCTaGCTGGAGTTCCATGTCTTGAATGTCCAAATAGTATCTCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SECQKEREVLHKRSC*LEFHVLNVQIVSLQ Trigger: TTGAAGAGATACTATTTGGACATTCAAGACATGGAACTCCAGCAAGCAAGATCTTTTATGCAACACTTCTCTTTCCTTTTGGCACTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTCATTTAACCTTAGGCAATGGAGTATATTTACTGCCCTACAGTAGAGTTTATTCTGGCCCTATATaGGGTTCTCTTAAGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: TSHLTLGNGVYLLPYSRVYSGPI*GSLKRL Trigger: AAGCCTCTTAAGAGAACCTCATATAGGGCCAGAATA...AACTCTACTGTAGGGCAGTAAATATACTCCATTGCCTAAGGTTAAATGACTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR CCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCAGCATGTCTGAAGGATaGGAAGGAAATTGCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SSELLLIEIATCDKFPERSMSEG*EGNCFP Trigger: AGGGAAGCAATTTCCTTCCCATCCTTCAGACATGCT...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| 3UTR-3UTR GCA 90 bp | AATGGAGTATATTTACTGCCCTACAGTAGAGTTTTCACCTTCAGTCTTACAGTGCTTTGGAGAGAAAAGTaGGATCATGATGCTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: NGVYLLPYSRVFTFSLTVLWREK*DHDAFL Trigger: TAGAAAAGCATCATGATCGCACTTTTCTCTCCAAAG...CACTGTAAGACTGAAGGTGAAAACTCTACTGTAGGGCAGTAAATATACTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR GCA 90 bp | TTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCTACCATCTGAAATGTACACACACATaGATGAGCTTTGGGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LEKFYQQSSLSTQYFYHLKCTHT*MSFGKT Trigger: TGTCTTCCCAAAGCTCATGCATGTGTGTGTACATTT...CAGATGGTAGAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTTGTTCCAAGGGATTTGCTGTGAGAATTCTTATAACATCTGTAATGTATTGGGTTTGTACCACTTaGGCAAACACTACAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: SSCSKGFAVRILITSVMYWVCTT*ANTTRM Trigger: CATTCTTGTAGTGTTTGCCCAAGTGGTACAAACCCA...ATACATTACAGATGTTATAAGAATTCTCACAGCAAATCCCTTGGAACAAGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTTGTTCCAAGGGATTTGCTGTGAGAATTCTTATAACATCTGTAATGTATCATCCCACTGCTGGCTaGTTTAATAACATTTACTCT | + |
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Preference number: 2 (lower is better) Translates to: SSCSKGFAVRILITSVMYHPTAG*FNNIYS Trigger: AGAGTAAATGTTATTAAATCAGCCAGCAGTGGGATG...ATACATTACAGATGTTATAAGAATTCTCACAGCAAATCCCTTGGAACAAGAGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR-3UTR GCA 90 bp | ATTTTATACCATAGCTTCTGTGATCTTTCCTTAACTGGTTCCAGGAAAACACACTACAGAACTCATGGATaGAAAGAAGCAGATAATGTA | + |
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Preference number: 2 (lower is better) Translates to: ILYHSFCDLSLTGSRKTHYRTHG*KEADNV Trigger: TACATTATCTGCTTCTTTGCATCCATGAGTTCTGTA...GTGTGTTTTCCTGGAACCAGTTAAGGAAAGATCACAGAAGCTATGGTATAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| 3UTR TCA 72 bp | GTTCTGGAATCCATGCCCAGGGTTAAGAGAGCTCCGTaGTGTGGCTGCAGTCTGGAAGGCAGTCTGGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: VLESMPRVKRAP*CGCSLEGSLVC Trigger: GCAGACCAGACTGCCTTCCAGACTGCAGCCACATCACGGAGCTCTCTTAACCCTGGGCATGGATTCCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| 3UTR CCA 72 bp | GTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTaGGCCTCTGATGAGAATAACCCATTGACAACGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VVLPSVTPVSVQ*ASDENNPLTTL Trigger: GAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR CCA 72 bp | ACTGTCTTTCTGTGTGGAACACCTTCAGAACAGTCCTaGGAGGCAGGCTGGCTGGCTTTCAAACATGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TVFLCGTPSEQS*EAGWLAFKHEH Trigger: GTGCTCATGTTTGAAAGCCAGCCAGCCTGCCTCCCAGGACTGTTCTGAAGGTGTTCCACACAGAAAGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR TCA 72 bp | TGTCAGTGCAGTGGGCCTCTGATGAGAATAACCCATTaGCAACGCTCGCAGCCATTCACAAAGACACCACCT | + |
|
Preference number: 3 (lower is better) Translates to: CQCSGPLMRITH*QRSQPFTKTPP Trigger: AGGTGGTGTCTTTGTGAATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR TCA 72 bp | GAAGATAAAGTGACTGACAGGTGGTTCTTCCCTCAGTaGCTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EDKVTDRWFFPQ*LQCQCSGPLMR Trigger: TCTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTGTCAGTCACTTTATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR CCA 72 bp | CCCAGTCACCCAGTAGTGTACAGCATGTCTGAAGGATaGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSHPVVYSMSEG*EGNCFPVAFPA Trigger: AGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACATGCTGTACACTACTGGGTGACTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR TCA 72 bp | CTGGTTTCCCAGTCACCCAGTAGTGTACAGCATGTCTaGAGGATGGGAAGGAAATTGCTTCCCTGTTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: LVSQSPSSVQHV*RMGRKLLPCCI Trigger: AATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACATGCTGTACACTACTGGGTGACTGGGAAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR CCA 72 bp | GGTAGCCGGAACTGTTGCACAGAGAAACTCCGTCTTTaGAGAGAAAAGTGCGATCATGATGCTTTTCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSRNCCTEKLRL*REKCDHDAFLR Trigger: CCTTAGAAAAGCATCATGATCGCACTTTTCTCTCCAAAGACGGAGTTTCTCTGTGCAACAGTTCCGGCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| 3UTR-3UTR CAA 90 bp | AATGGAGTATATTTACTGCCCTACAGTAGAGTTTTCACCTTCAGTCTTACAGTGTCGCTGACCAGGCCATaGAAATCCTCTGGCATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NGVYLLPYSRVFTFSLTVSLTRP*KSSGIR Trigger: TCTGATGCCAGAGGATTTCAATGGCCTGGTCAGCGA...CACTGTAAGACTGAAGGTGAAAACTCTACTGTAGGGCAGTAAATATACTCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCTGCTTTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCGGCCCAGGGCTATTGTaGTCAGAGTATGTACCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SAALEKFYQQSSLSTQYFGPGLL*SEYVPS Trigger: GCTAGGTACATACTCTGACAACAATAGCCCTGGGCC...GAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAAAGCAGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGGCCAAGGGCATTAGAATTTCTAATTATTTTCTTGGAACTGTGCCCCAATCTTTGGGGGTGAGCTaGATCTTCTTTGGCAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FLAKGIRISNYFLGTVPQSLGVS*IFFGSS Trigger: ACTGCTGCCAAAGAAGATCAAGCTCACCCCCAAAGA...TTGGGGCACAGTTCCAAGAAAATAATTAGAAATTCTAATGCCCTTGGCCAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAACTGAGGCCTTGATTCTAGTTTCCACTTACCTCGCAGCTCCTCTTGATCTAGGCTTATTTTATTACTaGGTTTGTGTCCTTTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KTEALILVSTYLAAPLDLGLFYY*VCVLCC Trigger: GCAGCAAAGGACACAAACCAAGTAATAAAATAAGCC...TAGATCAAGAGGAGCTGCGAGGTAAGTGGAAACTAGAATCAAGGCCTCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR TCA 72 bp | GATTACTTTCAGATTTGTAGATATTCTGGCCCTATATaGGGTTCTCTTAAGAGGCTTTGGCTCCACCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DYFQICRYSGPI*GSLKRLWLHLG Trigger: TCCAAGGTGGAGCCAAAGCCTCTTAAGAGAACCTCATATAGGGCCAGAATATCTACAAATCTGAAAGTAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGTCATTTAACCTTAGGCAATGGAGTATATTTACTGCCCTACAGTAGAGTTTTCTCTTACCCAAGGTaGTTTCTCCTTCAGTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSHLTLGNGVYLLPYSRVFSYPR*FLLQSL Trigger: CAGGGACTGAAGGAGAAACAACCTTGGGTAAGAGAA...AACTCTACTGTAGGGCAGTAAATATACTCCATTGCCTAAGGTTAAATGACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGGCCAAGGGCATTAGAATTTCTAATTATTTTCTTGGAACTGTGCCCCAAGAGGAAAAGTGTTACTaGTTTTACCAGCAGTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FLAKGIRISNYFLGTVPQEEKCY*FYQQWE Trigger: CTCCCACTGCTGGTAAAACAAGTAACACTTTTCCTC...TTGGGGCACAGTTCCAAGAAAATAATTAGAAATTCTAATGCCCTTGGCCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR TCA 72 bp | GTATTTCTGGCAGCTAGTAAAAACTGCTTTGTTGAATaGTTGATCTCAGGGAGGACAGACTGGGTTTTTATC | + |
|
Preference number: 3 (lower is better) Translates to: VFLAASKNCFVE*LISGRTDWVFI Trigger: GATAAAAACCCAGTCTGTCCTCCCTGAGATCAATCATTCAACAAAGCAGTTTTTACTAGCTGCCAGAAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR TCA 72 bp | TTTGAGTACACAGATAAGGTTTACTTCCTAGTGTTCTaGCCCATGGTATTTCTGGCAGCTAGTAAAAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: FEYTDKVYFLVF*PMVFLAASKNC Trigger: GCAGTTTTTACTAGCTGCCAGAAATACCATGGGTCAGAACACTAGGAAGTAAACCTTATCTGTGTACTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCGAAATTGCTTCCCTGTaGCATTCCCAGCTTATGATG | + |
|
Preference number: 3 (lower is better) Translates to: SSELLLIEIATCDKFPEREIASL*HSQLMM Trigger: CATCATAAGCTGGGAATGCAACAGGGAAGCAATTTC...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR TCA 72 bp | GAAACCATCAGGCCTGACAAAAAGATTCTTCCTAGATaGCATGATCAAGGAAATTTATACTTCTCTCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: ETIRPDKKILPR*HDQGNLYFSHG Trigger: CCCATGAGAGAAGTATAAATTTCCTTGATCATGTCATCTAGGAAGAATCTTTTTGTCAGGCCTGATGGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| 3UTR GCA 72 bp | ATTACAGTGCCTGCCCTCCTCTTGTTCCAAGGGATTTaGTGTGAGAATTCTTATAACATCTGTAATGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: ITVPALLLFQGI*CENSYNICNVF Trigger: AAATACATTACAGATGTTATAAGAATTCTCACAGCAAATCCCTTGGAACAAGAGGAGGGCAGGCACTGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| 3UTR TCA 72 bp | AAACACTGCAGCTGTTTTCAGCAAACTTGGATCCAGTaGTTTAAGCTTCTGTCATTAACTGAGCACTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: KHCSCFQQTWIQ*FKLLSLTEHYK Trigger: TTTATAGTGCTCAGTTAATGACAGAAGCTTAAATCACTGGATCCAAGTTTGCTGAAAACAGCTGCAGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR GCA 72 bp | TATGGCTTATTTTATTACTTGGTTTGTGTCCTTTGCTaGTGCTTGAATTTCTATGGGCTATGTTGTAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: YGLFYYLVCVLC*CLNFYGLCCKE Trigger: CTCCTTACAACATAGCCCATAGAAATTCAAGCAGCAGCAAAGGACACAAACCAAGTAATAAAATAAGCCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR CAA 72 bp | GCCGGGTGCAAGTGGCACACACCTTTATCCGAGCACTaGGGAGGCAGAGGAGGTGGGTCTCTGAGTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGCKWHTPLSEH*GGRGGGSLSSR Trigger: CCTTGAACTCAGAGACCCACCTCCTCTGCCTCCCAAGTGCTCGGATAAAGGTGTGTGCCACTTGCACCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR GCA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGTCTGGATCCCCACCATaGCTCCACACGTCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QVVLPSVTPVSVQWASDESGSPP*LHTSPP Trigger: CGGAGGAGACGTGTGGAGGCATGGTGGGGATCCAGA...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGTTCTGGAATCCATGCCCAGGGTTAAGAGAGCTCCGTGATGTGGCTGCAAGCGCCCTCTGCTGCTaGGCAGGTAACACCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELFWNPCPGLRELRDVAASALCC*AGNTAK Trigger: CTTTGCGGTGTTACCTGCCCAGCAGCAGAGGGCGCT...TGCAGCCACATCACGGAGCTCTCTTAACCCTGGGCATGGATTCCAGAACAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGCATAGGCAATGGTGGTaGCAGCAGGGATCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVVLPSVTPVSVQWASDEHRQWW*QQGSPA Trigger: TGCTGGAGATCCCTGCTGCCACCACCATTGCCTATG...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGTTCTGGAATCCATGCCCAGGGTTAAGAGAGCTCCGTGATGTGGCTGCATGCCATAGGCAATGGTaGTGGCAGCAGGGATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELFWNPCPGLRELRDVAACHRQW*WQQGSP Trigger: TGGAGATCCCTGCTGCCACCACCATTGCCTATGGCA...TGCAGCCACATCACGGAGCTCTCTTAACCCTGGGCATGGATTCCAGAACAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR GCA 90 bp | GACCGGTCCTCTAGACAGGCAGACACCAGGGATGAACCAGCAGCCGCAGTCCATACCAGACTTAGAAGTTaGAGCTTGTCAGAGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRSSRQADTRDEPAAAVHTRLRS*SLSESF Trigger: GAACGACTCTGACAAGCTGCAACTTCTAAGTCTGGT...ATGGACTGCGGCTGCTGGTTCATCCCTGGTGTCTGCCTGTCTAGAGGACCGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTGCAGTGGGCCTCTGATGAGAATAACCCATTGACAACGCTCGCAGCCATTGCTGACCTCATCCTGTaGGCCAGGATGCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVQWASDENNPLTTLAAIADLIL*ARMLSL Trigger: CAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGC...AATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGTCATCAGACAGAGCATaGAGCAAGCAGCACAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QVVLPSVTPVSVQWASDESSDRA*SKQHSE Trigger: TTCGCTGTGCTGCTTGCTCCATGCTCTGTCTGATGA...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GATGAGAATAACCCATTGACAACGCTCGCAGCCATTCACAAAGACACCACCTCTTCTGGATCCCCACCATaGCTCCACACGTCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DENNPLTTLAAIHKDTTSSGSPP*LHTSPP Trigger: CGGAGGAGACGTGTGGAGGCATGGTGGGGATCCAGA...AGAGGTGGTGTCTTTGTGAATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGGAATTAGCGGGAAGATaGAAGAGTCCTTCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QVVLPSVTPVSVQWASDEELAGR*KSPSGW Trigger: CCATCCTGAAGGACTCTTGCATCTTCCCGCTAATTC...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR CAA 72 bp | GTGTCAGTGCAGTGGGCCTCTGATGAGAATAACCCATaGACAACGCTCGCAGCCATTCACAAAGACACCACC | + |
|
Preference number: 4 (lower is better) Translates to: VSVQWASDENNP*TTLAAIHKDTT Trigger: GGTGGTGTCTTTGTGAATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTGCAGTGGGCCTCTGATGAGAATAACCCATTGACAACGCTCGCAGCCATTGCCAAGGTGGGGTTGTaGAAATCACACACGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVQWASDENNPLTTLAAIAKVGL*KSHTLS Trigger: TGACAGCGTGTGTGATTTTCACAACCCCACCTTGGC...AATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGACCAGACTTAGAAGTTaGAGCTTGTCAGAGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVVLPSVTPVSVQWASDETRLRS*SLSESF Trigger: GAACGACTCTGACAAGCTGCAACTTCTAAGTCTGGT...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGTTCTGGAATCCATGCCCAGGGTTAAGAGAGCTCCGTGATGTGGCTGCAACTGGACTGAGACAGTaGCCTTCTGTGAGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: ELFWNPCPGLRELRDVAATGLRQ*PSVSTS Trigger: AGATGTACTCACAGAAGGGCACTGTCTCAGTCCAGT...TGCAGCCACATCACGGAGCTCTCTTAACCCTGGGCATGGATTCCAGAACAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR GCA 90 bp | TGTCTGAAGGATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGCATCCTGGATGAGCTaGTGCACGTCCACCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLKDGKEIASLLHSQLMMASWMS*CTSTSC Trigger: GCAGGAGGTGGACGTGCAGCAGCTCATCCAGGATGC...CATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTTTGGCTCCACCTTGGAGCTGACACTAATTCCCTTTCTGAATATTCTGCAGAACAGCGCCCTCTaGTGCTGGGCAGGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: RGFGSTLELTLIPFLNILQNSAL*CWAGNT Trigger: GGTGTTACCTGCCCAGCAGCAGAGGGCGCTGTTCTG...CAGAATATTCAGAAAGGGAATTAGTGTCAGCTCCAAGGTGGAGCCAAAGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | GATTCAACCTCTCTTCTAGCCCACCACCCAGCAGAGGTAGTGGAAGAGAAAAGTCATAGGCAATGGTGGTaGCAGCAGGGATCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSTSLLAHHPAEVVEEKSHRQWW*QQGSPA Trigger: TGCTGGAGATCCCTGCTGCCACCACCATTGCCTATG...ACTTTTCTCTTCCACTACCTCTGCTGGGTGGTGGGCTAGAAGAGAGGTTGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAAAGCGCCCTCTGCTGCTaGGCAGGTAACACCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSESALCC*AGNTAK Trigger: CTTTGCGGTGTTACCTGCCCAGCAGCAGAGGGCGCT...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGAATAACCCATTGACAACGCTCGCAGCCATTCACAAAGACACCACCTCTGCTGACCTCATCCTGTaGGCCAGGATGCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DENNPLTTLAAIHKDTTSADLIL*ARMLSL Trigger: CAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGC...AGAGGTGGTGTCTTTGTGAATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGAGCGAAGAAATAACATaGAGTTTGCAGCAAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVVLPSVTPVSVQWASDESEEIT*SLQQVP Trigger: GGGGACTTGCTGCAAACTCCATGTTATTTCTTCGCT...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGTTCTGGAATCCATGCCCAGGGTTAAGAGAGCTCCGTGATGTGGCTGCAACCAGACTTAGAAGTTaGAGCTTGTCAGAGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELFWNPCPGLRELRDVAATRLRS*SLSESF Trigger: GAACGACTCTGACAAGCTGCAACTTCTAAGTCTGGT...TGCAGCCACATCACGGAGCTCTCTTAACCCTGGGCATGGATTCCAGAACAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR GCA 90 bp | TCAGTGCAGTGGGCCTCTGATGAGAATAACCCATTGACAACGCTCGCAGCCATTTGGTACTTGGGTCTCTaGCAGCACCAGTATCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVQWASDENNPLTTLAAIWYLGL*QHQYLF Trigger: GAAGAGATACTGGTGCTGGCAGAGACCCAAGTACCA...AATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATAGCATCCTGGATGAGCTaGTGCACGTCCACCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EIATCDKFPERTGIAPDIASWMS*CTSTSC Trigger: GCAGGAGGTGGACGTGCAGCAGCTCATCCAGGATGC...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATACAGAACAGCGCCCTCTaGTGCTGGGCAGGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: EIATCDKFPERTGIAPDIQNSAL*CWAGNT Trigger: GGTGTTACCTGCCCAGCAGCAGAGGGCGCTGTTCTG...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GATCTACAGCACAGTGGCTGCACTGGGACAGGTGGGGTATGGCTTATTTTATTACTGTATCCCACCAGCTaGAAGAAGGCTGTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLQHSGCTGTGGVWLILLLYPTS*KKAVRS Trigger: GGACCTCACAGCCTTCTTGCAGCTGGTGGGATACAG...TAATAAAATAAGCCATACCCCACCTGTCCCAGTGCAGCCACTGTGCTGTAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGGTACATCTTCCAGGGTaGCAGATAAAATCTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QVVLPSVTPVSVQWASDEVHLPG*QIKSGT Trigger: AGTACCAGATTTTATCTGCCACCCTGGAAGATGTAC...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAATGCACGTCCACCTCCTaGTTCCTCAGGGTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSECTSTS*FLRVPN Trigger: GTTTGGAACCCTGAGGAAGCAGGAGGTGGACGTGCA...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTGGCAGCAGTTCAGTCCCATAGCAAACACCAAATACGACTCAGCAGCTACAGGACCTCGTTCCTaGTCTCTAGCACCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLWQQFSPIANTKYDSAATGPRS*SLAPAE Trigger: TTCAGCAGGTGCTAGAGAGCAGGAACGAGGTCCTGT...AGCTGCTGAGTCGTATTTGGTGTTTGCTATGGGACTGAACTGCTGCCAAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR GCA 90 bp | GATGAGAATAACCCATTGACAACGCTCGCAGCCATTCACAAAGACACCACCTCTGTGGTCATGATCTTCTaGGTCAGCACACACAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: DENNPLTTLAAIHKDTTSVVMIF*VSTHRT Trigger: GGTCCTGTGTGTGCTGACGCAGAAGATCATGACCAC...AGAGGTGGTGTCTTTGTGAATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GATCTACAGCACAGTGGCTGCACTGGGACAGGTGGGGTATGGCTTATTTTATTAGTGGTCATGATCTTCTaGGTCAGCACACACAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: DLQHSGCTGTGGVWLILLVVMIF*VSTHRT Trigger: GGTCCTGTGTGTGCTGACGCAGAAGATCATGACCAC...TAATAAAATAAGCCATACCCCACCTGTCCCAGTGCAGCCACTGTGCTGTAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR GCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAACTGTATCCCACCAGCTaGAAGAAGGCTGTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSELYPTS*KKAVRS Trigger: GGACCTCACAGCCTTCTTGCAGCTGGTGGGATACAG...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR CCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAACATAGGCAATGGTGGTaGCAGCAGGGATCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSEHRQWW*QQGSPA Trigger: TGCTGGAGATCCCTGCTGCCACCACCATTGCCTATG...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR CCA 90 bp | TCAGTGCAGTGGGCCTCTGATGAGAATAACCCATTGACAACGCTCGCAGCCATTCCACCATGTTTCCCTTaGAGGAGGCAGAATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVQWASDENNPLTTLAAIPPCFP*RRQNSN Trigger: GTTTGAATTCTGCCTCCTCCAAGGGAAACATGGTGG...AATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR TCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAAGCCAAGGTGGGGTTGTaGAAATCACACACGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSEAKVGL*KSHTLS Trigger: TGACAGCGTGTGTGATTTTCACAACCCCACCTTGGC...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGAATAACCCATTGACAACGCTCGCAGCCATTCACAAAGACACCACCTCTGTAGCATGTCCTGACTaGCAAAGCTCTTCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: DENNPLTTLAAIHKDTTSVACPD*QSSSSC Trigger: GCATGAGGAAGAGCTTTGTCAGTCAGGACATGCTAC...AGAGGTGGTGTCTTTGTGAATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR GCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAAACAGGACCTCGTTCCTaGTCTCTAGCACCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSETGPRS*SLAPAE Trigger: TTCAGCAGGTGCTAGAGAGCAGGAACGAGGTCCTGT...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR GCA 90 bp | TCAGTGCAGTGGGCCTCTGATGAGAATAACCCATTGACAACGCTCGCAGCCATTTCTAGTTTCCTCTCATaGTCGAAGCCACCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVQWASDENNPLTTLAAISSFLS*SKPPCF Trigger: GAAACATGGTGGCTTCGAGCATGAGAGGAAACTAGA...AATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCACAGAACAGCGCCCTCTaGTGCTGGGCAGGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LIEIATCDKFPERTGIAPQNSAL*CWAGNT Trigger: GGTGTTACCTGCCCAGCAGCAGAGGGCGCTGTTCTG...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR GCA 90 bp | GATTCAACCTCTCTTCTAGCCCACCACCCAGCAGAGGTAGTGGAAGAGAAAAGTTCAAACAGGATTTTCTaGAGGACACAGAACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSTSLLAHHPAEVVEEKSSNRIF*RTQNSA Trigger: GGCGCTGTTCTGTGTCCTGCAGAAAATCCTGTTTGA...ACTTTTCTCTTCCACTACCTCTGCTGGGTGGTGGGCTAGAAGAGAGGTTGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| CDS-3UTR CCA 90 bp | TCAGTGCAGTGGGCCTCTGATGAGAATAACCCATTGACAACGCTCGCAGCCATTATAAAATCTGGTACTTaGGTCTCTGCCAGCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVQWASDENNPLTTLAAIIKSGT*VSASTS Trigger: ACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTAT...AATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR CAA 72 bp | TTAAATCCTCTTCCAAGTCCCTCGCTGACCAGGCCATaGAAATCCTCTGGCATCAGAGTACATCAGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNPLPSPSLTRP*KSSGIRVHQRR Trigger: TCTACGCTGATGTACTCTGATGCCAGAGGATTTCAATGGCCTGGTCAGCGAGGGACTTGGAAGAGGATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| 3UTR CAA 72 bp | ATGTGGGGGAAAGTGGACCTGTTCAGCAATAGTTCTTaGGGGGTGAGCTTGATCTTCTTTGGCAGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MWGKVDLFSNSS*GVSLIFFGSSS Trigger: TGAACTGCTGCCAAAGAAGATCAAGCTCACCCCCAAAGAACTATTGCTGAACAGGTCCACTTTCCCCCACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| CDS-3UTR GCA 90 bp | CTTCTTTGGCAGCAGTTCAGTCCCATAGCAAACACCAAATACGACTCAGCAGCTACTGGACTGAGACAGTaGCCTTCTGTGAGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWQQFSPIANTKYDSAATGLRQ*PSVSTS Trigger: AGATGTACTCACAGAAGGGCACTGTCTCAGTCCAGT...AGCTGCTGAGTCGTATTTGGTGTTTGCTATGGGACTGAACTGCTGCCAAAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGCTTTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCGCATCCTGGATGAGCTaGTGCACGTCCACCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAALEKFYQQSSLSTQYFASWMS*CTSTSC Trigger: GCAGGAGGTGGACGTGCAGCAGCTCATCCAGGATGC...GAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAAAGCAGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| CDS-3UTR GCA 90 bp | CACAGGAAATGTTCCATATTCCCCAGTGTACCTTCATGCTGTCTTATGAAGCCTGTGGTCATGATCTTCTaGGTCAGCACACACAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HRKCSIFPSVPSCCLMKPVVMIF*VSTHRT Trigger: GGTCCTGTGTGTGCTGACGCAGAAGATCATGACCAC...AGGCTTCATAAGACAGCATGAAGGTACACTGGGGAATATGGAACATTTCCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| CDS-3UTR GCA 90 bp | TCTATCCACTCAGTATTTCTACCATCTGGGTCCAACAGAAACAATAGCTACATATCTGGATCCCCACCATaGCTCCACACGTCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SIHSVFLPSGSNRNNSYISGSPP*LHTSPP Trigger: CGGAGGAGACGTGTGGAGGCATGGTGGGGATCCAGA...TATGTAGCTATTGTTTCTGTTGGACCCAGATGGTAGAAATACTGAGTGGATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| CDS-3UTR GCA 90 bp | TTTCTGGCCAAGGGCATTAGAATTTCTAATTATTTTCTTGGAACTGTGCCCCAATCTGGATCCCCACCATaGCTCCACACGTCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FLAKGIRISNYFLGTVPQSGSPP*LHTSPP Trigger: CGGAGGAGACGTGTGGAGGCATGGTGGGGATCCAGA...TTGGGGCACAGTTCCAAGAAAATAATTAGAAATTCTAATGCCCTTGGCCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| CDS-3UTR GCA 90 bp | TTTCTGGCCAAGGGCATTAGAATTTCTAATTATTTTCTTGGAACTGTGCCCCAACAGAACAGCGCCCTCTaGTGCTGGGCAGGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: FLAKGIRISNYFLGTVPQQNSAL*CWAGNT Trigger: GGTGTTACCTGCCCAGCAGCAGAGGGCGCTGTTCTG...TTGGGGCACAGTTCCAAGAAAATAATTAGAAATTCTAATGCCCTTGGCCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| CDS-3UTR GCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAATCCTGTGGGCCAGGATaGTCTCCTTGTATCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSESCGPG*SPCILY Trigger: ATACAGGATACAAGGAGAGCATCCTGGCCCACAGGA...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR GCA 90 bp | GATGAGAATAACCCATTGACAACGCTCGCAGCCATTCACAAAGACACCACCTCTGAATTAGCGGGAAGATaGAAGAGTCCTTCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: DENNPLTTLAAIHKDTTSELAGR*KSPSGW Trigger: CCATCCTGAAGGACTCTTGCATCTTCCCGCTAATTC...AGAGGTGGTGTCTTTGTGAATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR CCA 90 bp | TGTGTTCCTTTTCCCTTCTTTGCTTTCAGGCATCTAGAAGAGTCAATAACTTTCAGCGCCCTCTGCTGCTaGGCAGGTAACACCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVPFPFFAFRHLEESITFSALCC*AGNTAK Trigger: CTTTGCGGTGTTACCTGCCCAGCAGCAGAGGGCGCT...GAAAGTTATTGACTCTTCTAGATGCCTGAAAGCAAAGAAGGGAAAAGGAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| CDS-3UTR TCA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACAGTGCCCTTCTGTaGGTACATCTTCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIEIATCDKFPERTGIAPDSALL*VHLPGW Trigger: CCACCCTGGAAGATGTACTCACAGAAGGGCACTGTC...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR TCA 90 bp | TGTCTGAAGGATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGTATTTCACGAAGTCTaGCTCCACAACCACTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CLKDGKEIASLLHSQLMMVFHEV*LHNHWT Trigger: AGTCCAGTGGTTGTGGAGTCAGACTTCGTGAAATAC...CATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR GCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAAACTGGACTGAGACAGTaGCCTTCTGTGAGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSETGLRQ*PSVSTS Trigger: AGATGTACTCACAGAAGGGCACTGTCTCAGTCCAGT...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR GCA 90 bp | TGTCTGAAGGATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGACTGGACTGAGACAGTaGCCTTCTGTGAGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: CLKDGKEIASLLHSQLMMTGLRQ*PSVSTS Trigger: AGATGTACTCACAGAAGGGCACTGTCTCAGTCCAGT...CATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR GCA 90 bp | ATTTTATACCATAGCTTCTGTGATCTTTCCTTAACTGGTTCCAGGAAAACACACGCATCCTGGATGAGCTaGTGCACGTCCACCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILYHSFCDLSLTGSRKTHASWMS*CTSTSC Trigger: GCAGGAGGTGGACGTGCAGCAGCTCATCCAGGATGC...GTGTGTTTTCCTGGAACCAGTTAAGGAAAGATCACAGAAGCTATGGTATAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| CDS-3UTR GCA 90 bp | GATGAGAATAACCCATTGACAACGCTCGCAGCCATTCACAAAGACACCACCTCTTCTAGTTTCCTCTCATaGTCGAAGCCACCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DENNPLTTLAAIHKDTTSSSFLS*SKPPCF Trigger: GAAACATGGTGGCTTCGAGCATGAGAGGAAACTAGA...AGAGGTGGTGTCTTTGTGAATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR GCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAATCAAACAGGATTTTCTaGAGGACACAGAACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSESNRIF*RTQNSA Trigger: GGCGCTGTTCTGTGTCCTGCAGAAAATCCTGTTTGA...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGAAATGTTCCATATTCCCCAGTGTACCTTCATGCTGTCTTATGAAGCCTTCCTGTGGGCCAGGATaGTCTCCTTGTATCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HRKCSIFPSVPSCCLMKPSCGPG*SPCILY Trigger: ATACAGGATACAAGGAGAGCATCCTGGCCCACAGGA...AGGCTTCATAAGACAGCATGAAGGTACACTGGGGAATATGGAACATTTCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| CDS-3UTR GCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATAGCTTTCGCAGAAAACTaGATCCTCTCCAGGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: EIATCDKFPERTGIAPDIAFAEN*ILSRAM Trigger: CATTGCCCTGGAGAGGATGCAGTTTTCTGCGAAAGC...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GATGAGAATAACCCATTGACAACGCTCGCAGCCATTCACAAAGACACCACCTCTCAAAGCTCTTCCTCATaGTCTTTGCTTAGAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DENNPLTTLAAIHKDTTSQSSSS*SLLRVL Trigger: CAGCACTCTAAGCAAAGAGCATGAGGAAGAGCTTTG...AGAGGTGGTGTCTTTGTGAATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAAGTGGCAGATAAAATCTaGTACTTGGGTCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSEVADKI*YLGLCQ Trigger: CTGGCAGAGACCCAAGTACCAGATTTTATCTGCCAC...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCATGCCATAGGCAATGGTaGTGGCAGCAGGGATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIEIATCDKFPERTGIAPCHRQW*WQQGSP Trigger: TGGAGATCCCTGCTGCCACCACCATTGCCTATGGCA...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTGGCAGCAGTTCAGTCCCATAGCAAACACCAAATACGACTCAGCAGCTAGCGAAGAAATAACATaGAGTTTGCAGCAAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLWQQFSPIANTKYDSAASEEIT*SLQQVP Trigger: GGGGACTTGCTGCAAACTCCATGTTATTTCTTCGCT...AGCTGCTGAGTCGTATTTGGTGTTTGCTATGGGACTGAACTGCTGCCAAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTGAAGGATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGCCACTTAGAGTGATGTaGAGAATTAGCGGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CLKDGKEIASLLHSQLMMPLRVM*RISGKM Trigger: CATCTTCCCGCTAATTCTTCACATCACTCTAAGTGG...CATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | AATGGAGTATATTTACTGCCCTACAGTAGAGTTTTCACCTTCAGTCTTACAGTGTGCACGTCCACCTCCTaGTTCCTCAGGGTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NGVYLLPYSRVFTFSLTVCTSTS*FLRVPN Trigger: GTTTGGAACCCTGAGGAAGCAGGAGGTGGACGTGCA...CACTGTAAGACTGAAGGTGAAAACTCTACTGTAGGGCAGTAAATATACTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR GCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATATCAAACAGGATTTTCTaGAGGACACAGAACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EIATCDKFPERTGIAPDISNRIF*RTQNSA Trigger: GGCGCTGTTCTGTGTCCTGCAGAAAATCCTGTTTGA...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | TCTATCCACTCAGTATTTCTACCATCTGGGTCCAACAGAAACAATAGCTACATACTGTATCCCACCAGCTaGAAGAAGGCTGTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIHSVFLPSGSNRNNSYILYPTS*KKAVRS Trigger: GGACCTCACAGCCTTCTTGCAGCTGGTGGGATACAG...TATGTAGCTATTGTTTCTGTTGGACCCAGATGGTAGAAATACTGAGTGGATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAAATAAAATCTGGTACTTaGGTCTCTGCCAGCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSEIKSGT*VSASTS Trigger: ACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTAT...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCCTTTTCCCTTCTTTGCTTTCAGGCATCTAGAAGAGTCAATAACTTTCTGCCATAGGCAATGGTaGTGGCAGCAGGGATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVPFPFFAFRHLEESITFCHRQW*WQQGSP Trigger: TGGAGATCCCTGCTGCCACCACCATTGCCTATGGCA...GAAAGTTATTGACTCTTCTAGATGCCTGAAAGCAAAGAAGGGAAAAGGAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGAAATGTTCCATATTCCCCAGTGTACCTTCATGCTGTCTTATGAAGCCTCCACCATGTTTCCCTTaGAGGAGGCAGAATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRKCSIFPSVPSCCLMKPPPCFP*RRQNSN Trigger: GTTTGAATTCTGCCTCCTCCAAGGGAAACATGGTGG...AGGCTTCATAAGACAGCATGAAGGTACACTGGGGAATATGGAACATTTCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATACCACCATGTTTCCCTTaGAGGAGGCAGAATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EIATCDKFPERTGIAPDIPPCFP*RRQNSN Trigger: GTTTGAATTCTGCCTCCTCCAAGGGAAACATGGTGG...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCAGCGCCCTCTGCTGCTaGGCAGGTAACACCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERSALCC*AGNTAK Trigger: CTTTGCGGTGTTACCTGCCCAGCAGCAGAGGGCGCT...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGTCATTTAACCTTAGGCAATGGAGTATATTTACTGCCCTACAGTAGAGTTGCTGACCTCATCCTGTaGGCCAGGATGCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSHLTLGNGVYLLPYSRVADLIL*ARMLSL Trigger: CAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGC...AACTCTACTGTAGGGCAGTAAATATACTCCATTGCCTAAGGTTAAATGACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAAAGCGAAGAAATAACATaGAGTTTGCAGCAAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSESEEIT*SLQQVP Trigger: GGGGACTTGCTGCAAACTCCATGTTATTTCTTCGCT...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCTACCATCTGGACAGTGCCCTTCTGTaGGTACATCTTCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEKFYQQSSLSTQYFYHLDSALL*VHLPGW Trigger: CCACCCTGGAAGATGTACTCACAGAAGGGCACTGTC...CAGATGGTAGAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR TCA 90 bp | ATTTTATACCATAGCTTCTGTGATCTTTCCTTAACTGGTTCCAGGAAAACACACGACAGTGCCCTTCTGTaGGTACATCTTCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILYHSFCDLSLTGSRKTHDSALL*VHLPGW Trigger: CCACCCTGGAAGATGTACTCACAGAAGGGCACTGTC...GTGTGTTTTCCTGGAACCAGTTAAGGAAAGATCACAGAAGCTATGGTATAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR TCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATACCACTTAGAGTGATGTaGAGAATTAGCGGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EIATCDKFPERTGIAPDIPLRVM*RISGKM Trigger: CATCTTCCCGCTAATTCTTCACATCACTCTAAGTGG...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGAGGCCTTGATTCTAGTTTCCACTTACCTCGCAGCTCCTCTTGATCTATCTAGTTTCCTCTCATaGTCGAAGCCACCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTEALILVSTYLAAPLDLSSFLS*SKPPCF Trigger: GAAACATGGTGGCTTCGAGCATGAGAGGAAACTAGA...TAGATCAAGAGGAGCTGCGAGGTAAGTGGAAACTAGAATCAAGGCCTCAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGAAGGATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGAAACTCCTCTCTAGGTaGAGGGTTGCTTGTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: CLKDGKEIASLLHSQLMMKLLSR*RVACFT Trigger: TGTAAAACAAGCAACCCTGCACCTAGAGAGGAGTTT...CATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTTTGGCTCCACCTTGGAGCTGACACTAATTCCCTTTCTGAATATTCTGAAACTCCTCTCTAGGTaGAGGGTTGCTTGTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: RGFGSTLELTLIPFLNILKLLSR*RVACFT Trigger: TGTAAAACAAGCAACCCTGCACCTAGAGAGGAGTTT...CAGAATATTCAGAAAGGGAATTAGTGTCAGCTCCAAGGTGGAGCCAAAGCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR GCA 90 bp | GATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACTCTGAAAAACTCCTCTCTAGGTaGAGGGTTGCTTGTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: DGKEIASLLHSQLMMDSEKLLSR*RVACFT Trigger: TGTAAAACAAGCAACCCTGCACCTAGAGAGGAGTTT...TTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCATCCTGTGGGCCAGGATaGTCTCCTTGTATCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LIEIATCDKFPERTGIAPSCGPG*SPCILY Trigger: ATACAGGATACAAGGAGAGCATCCTGGCCCACAGGA...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGCTTTCGCAGAAAACTaGATCCTCTCCAGGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LIEIATCDKFPERTGIAPAFAEN*ILSRAM Trigger: CATTGCCCTGGAGAGGATGCAGTTTTCTGCGAAAGC...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATACAAAGCTCTTCCTCATaGTCTTTGCTTAGAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIATCDKFPERTGIAPDIQSSSS*SLLRVL Trigger: CAGCACTCTAAGCAAAGAGCATGAGGAAGAGCTTTG...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTTTGGCTCCACCTTGGAGCTGACACTAATTCCCTTTCTGAATATTCTGGTACATCTTCCAGGGTaGCAGATAAAATCTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RGFGSTLELTLIPFLNILVHLPG*QIKSGT Trigger: AGTACCAGATTTTATCTGCCACCCTGGAAGATGTAC...CAGAATATTCAGAAAGGGAATTAGTGTCAGCTCCAAGGTGGAGCCAAAGCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | TTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCTACCATCTGCATAGGCAATGGTGGTaGCAGCAGGGATCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKFYQQSSLSTQYFYHLHRQWW*QQGSPA Trigger: TGCTGGAGATCCCTGCTGCCACCACCATTGCCTATG...CAGATGGTAGAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | AATACAGAACTCATGGATGCAAAGAAGCAGATAATGTATTTCCTCTTACTGTCTGCTGACCTCATCCTGTaGGCCAGGATGCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NTELMDAKKQIMYFLLLSADLIL*ARMLSL Trigger: CAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGC...AGACAGTAAGAGGAAATACATTATCTGCTTCTTTGCATCCATGAGTTCTGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR CAA 72 bp | GCATGTCTGAAGGATGGGAAGGAAATTGCTTCCCTGTaGCATTCCCAGCTTATGATGGACTCTGAAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ACLKDGKEIASL*HSQLMMDSEVK Trigger: TTTTACTTCAGAGTCCATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCGACAGTGCCCTTCTGTaGGTACATCTTCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERDSALL*VHLPGW Trigger: CCACCCTGGAAGATGTACTCACAGAAGGGCACTGTC...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | AATGGAGTATATTTACTGCCCTACAGTAGAGTTTTCACCTTCAGTCTTACAGTGTGGTACTTGGGTCTCTaGCAGCACCAGTATCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGVYLLPYSRVFTFSLTVWYLGL*QHQYLF Trigger: GAAGAGATACTGGTGCTGGCAGAGACCCAAGTACCA...CACTGTAAGACTGAAGGTGAAAACTCTACTGTAGGGCAGTAAATATACTCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCTGCACGTCCACCTCCTaGTTCCTCAGGGTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERCTSTS*FLRVPN Trigger: GTTTGGAACCCTGAGGAAGCAGGAGGTGGACGTGCA...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | AATACAGAACTCATGGATGCAAAGAAGCAGATAATGTATTTCCTCTTACTGTCTTGCACGTCCACCTCCTaGTTCCTCAGGGTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NTELMDAKKQIMYFLLLSCTSTS*FLRVPN Trigger: GTTTGGAACCCTGAGGAAGCAGGAGGTGGACGTGCA...AGACAGTAAGAGGAAATACATTATCTGCTTCTTTGCATCCATGAGTTCTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCTACCATCTGACAGGACCTCGTTCCTaGTCTCTAGCACCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEKFYQQSSLSTQYFYHLTGPRS*SLAPAE Trigger: TTCAGCAGGTGCTAGAGAGCAGGAACGAGGTCCTGT...CAGATGGTAGAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCCTGTATCCCACCAGCTaGAAGAAGGCTGTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERLYPTS*KKAVRS Trigger: GGACCTCACAGCCTTCTTGCAGCTGGTGGGATACAG...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTTCCTTTTCCCTTCTTTGCTTTCAGGCATCTAGAAGAGTCAATAACTTTCTCCTGTGGGCCAGGATaGTCTCCTTGTATCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CVPFPFFAFRHLEESITFSCGPG*SPCILY Trigger: ATACAGGATACAAGGAGAGCATCCTGGCCCACAGGA...GAAAGTTATTGACTCTTCTAGATGCCTGAAAGCAAAGAAGGGAAAAGGAACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCTGCCATAGGCAATGGTaGTGGCAGCAGGGATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERCHRQW*WQQGSP Trigger: TGGAGATCCCTGCTGCCACCACCATTGCCTATGGCA...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR CAA 72 bp | CTATATGAGGTTCTCTTAAGAGGCTTTGGCTCCACCTaGGAGCTGACACTAATTCCCTTTCTGAATATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYEVLLRGFGST*ELTLIPFLNIL Trigger: CAGAATATTCAGAAAGGGAATTAGTGTCAGCTCCAAGGTGGAGCCAAAGCCTCTTAAGAGAACCTCATATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| 3UTR CAA 72 bp | GTTGTAAGGAGTGAGTGCCAAAAGGAAAGAGAAGTGTaGCATAAAAGATCTTGCTTGCTGGAGTTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVRSECQKEREV*HKRSCLLEFHV Trigger: GACATGGAACTCCAGCAAGCAAGATCTTTTATGCAACACTTCTCTTTCCTTTTGGCACTCACTCCTTACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACAGGACCTCGTTCCTaGTCTCTAGCACCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERTGPRS*SLAPAE Trigger: TTCAGCAGGTGCTAGAGAGCAGGAACGAGGTCCTGT...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | TCTATCCACTCAGTATTTCTACCATCTGGGTCCAACAGAAACAATAGCTACATATCAAACAGGATTTTCTaGAGGACACAGAACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIHSVFLPSGSNRNNSYISNRIF*RTQNSA Trigger: GGCGCTGTTCTGTGTCCTGCAGAAAATCCTGTTTGA...TATGTAGCTATTGTTTCTGTTGGACCCAGATGGTAGAAATACTGAGTGGATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | CACAGGAAATGTTCCATATTCCCCAGTGTACCTTCATGCTGTCTTATGAAGCCTAGGCAGAATTCAAACTaGCCATCTTGTTTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRKCSIFPSVPSCCLMKPRQNSN*PSCFTN Trigger: GTTTGTGAAACAAGATGGCCAGTTTGAATTCTGCCT...AGGCTTCATAAGACAGCATGAAGGTACACTGGGGAATATGGAACATTTCCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCGTAGCATGTCCTGACTaGCAAAGCTCTTCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERVACPD*QSSSSC Trigger: GCATGAGGAAGAGCTTTGTCAGTCAGGACATGCTAC...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGCTTTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCATAAAATCTGGTACTTaGGTCTCTGCCAGCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAALEKFYQQSSLSTQYFIKSGT*VSASTS Trigger: ACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTAT...GAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAAAGCAGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCCTTTTCCCTTCTTTGCTTTCAGGCATCTAGAAGAGTCAATAACTTTCATAAAATCTGGTACTTaGGTCTCTGCCAGCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVPFPFFAFRHLEESITFIKSGT*VSASTS Trigger: ACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTAT...GAAAGTTATTGACTCTTCTAGATGCCTGAAAGCAAAGAAGGGAAAAGGAACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCTCATCAGACAGAGCATaGAGCAAGCAGCACAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERSSDRA*SKQHSE Trigger: TTCGCTGTGCTGCTTGCTCCATGCTCTGTCTGATGA...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCTACCATCTGTCTAGTTTCCTCTCATaGTCGAAGCCACCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEKFYQQSSLSTQYFYHLSSFLS*SKPPCF Trigger: GAAACATGGTGGCTTCGAGCATGAGAGGAAACTAGA...CAGATGGTAGAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CCA 90 bp | AATACAGAACTCATGGATGCAAAGAAGCAGATAATGTATTTCCTCTTACTGTCTCCACCATGTTTCCCTTaGAGGAGGCAGAATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NTELMDAKKQIMYFLLLSPPCFP*RRQNSN Trigger: GTTTGAATTCTGCCTCCTCCAAGGGAAACATGGTGG...AGACAGTAAGAGGAAATACATTATCTGCTTCTTTGCATCCATGAGTTCTGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR CAA 72 bp | GATTTAGACTTAAAGATTACAGTGCCTGCCCTCCTCTaGTTCCAAGGGATTTGCTGTGAGAATTCTTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLDLKITVPALL*FQGICCENSYN Trigger: GTTATAAGAATTCTCACAGCAAATCCCTTGGAACAAGAGGAGGGCAGGCACTGTAATCTTTAAGTCTAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR GCA 90 bp | TTAACTGAGCACTATAAAAGCTTTGGAGGAATATCTGGCTACTCTCACTTCATTAAACTCCTCTCTAGGTaGAGGGTTGCTTGTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LTEHYKSFGGISGYSHFIKLLSR*RVACFT Trigger: TGTAAAACAAGCAACCCTGCACCTAGAGAGGAGTTT...AATGAAGTGAGAGTAGCCAGATATTCCTCCAAAGCTTTTATAGTGCTCAGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CCA 90 bp | TTAACTGAGCACTATAAAAGCTTTGGAGGAATATCTGGCTACTCTCACTTCATTGTACATCTTCCAGGGTaGCAGATAAAATCTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LTEHYKSFGGISGYSHFIVHLPG*QIKSGT Trigger: AGTACCAGATTTTATCTGCCACCCTGGAAGATGTAC...AATGAAGTGAGAGTAGCCAGATATTCCTCCAAAGCTTTTATAGTGCTCAGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCCTTTTCCCTTCTTTGCTTTCAGGCATCTAGAAGAGTCAATAACTTTCAGGCAGAATTCAAACTaGCCATCTTGTTTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CVPFPFFAFRHLEESITFRQNSN*PSCFTN Trigger: GTTTGTGAAACAAGATGGCCAGTTTGAATTCTGCCT...GAAAGTTATTGACTCTTCTAGATGCCTGAAAGCAAAGAAGGGAAAAGGAACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCGTACATCTTCCAGGGTaGCAGATAAAATCTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERVHLPG*QIKSGT Trigger: AGTACCAGATTTTATCTGCCACCCTGGAAGATGTAC...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCAGGCAGAATTCAAACTaGCCATCTTGTTTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSELLLIEIATCDKFPERRQNSN*PSCFTN Trigger: GTTTGTGAAACAAGATGGCCAGTTTGAATTCTGCCT...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| 3UTR CAA 72 bp | TTGCATAAAAGATCTTGCTTGCTGGAGTTCCATGTCTaGAATGTCCAAATAGTATCTCTTCAATGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHKRSCLLEFHV*NVQIVSLQCLF Trigger: AAAAAGGCATTGAAGAGATACTATTTGGACATTCAAGACATGGAACTCCAGCAAGCAAGATCTTTTATGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| 3UTR CAA 72 bp | ATTTGCCCACATGTTACAGCTAGTATTCTAAGATCTTaGATTACTTTCAGATTTGTAGATATTCTGGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ICPHVTASILRS*ITFRFVDILAL Trigger: TAGGGCCAGAATATCTACAAATCTGAAAGTAATCAAAGATCTTAGAATACTAGCTGTAACATGTGGGCAAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS CCA 90 bp | GTGACCGTCCCATCCTCCGTTGCTGACACCTGTATAGTCTTGGTCTaGATCCCCACCATGCCTCCACACGTCTCCTCCGACTGCACATGC | + |
|
Preference number: 5 (lower is better) Translates to: VTVPSSVADTCIVLV*IPTMPPHVSSDCTC Trigger: GCATGTGCAGTCGGAGGAGACGTGTGGAGGCATGGTGGGGATCCAGACCAAGACTATACAGGTGTCAGCAACGGAGGATGGGACGGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | GACAGGCAGACACCAGGGATGAACCAGCAGCCGCAGTCCATTCCTTTCAGCACGATCTCCAGCACTACATaGGTGTCCGTGGTGACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: DRQTPGMNQQPQSIPFSTISSTT*VSVVTV Trigger: GACGGTCACCACGGACACCAATGTAGTGCTGGAGAT...CGTGCTGAAAGGAATGGACTGCGGCTGCTGGTTCATCCCTGGTGTCTGCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS TCA 90 bp | TGCTGCACGTCCACCTCCTGCTTCCTCAGGGTTCCAAACGAAGAGTaGCTCTCCACCACGCCTTTGCCACCAACGTTCAGCTTGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CCTSTSCFLRVPNEE*LSTTPLPPTFSLTF Trigger: GAAGGTCAAGCTGAACGTTGGTGGCAAAGGCGTGGTGGAGAGTCACTCTTCGTTTGGAACCCTGAGGAAGCAGGAGGTGGACGTGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS TCA 90 bp | ATCCTGTATCCCACCAGCTGCAAGAAGGCTGTGAGGTCCTGCTGCTaGCTGTCGGTCAGCTCCTCCATTGCCAATACAGCCTGTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILYPTSCKKAVRSCC*LSVSSSIANTACED Trigger: GTCCTCACAGGCTGTATTGGCAATGGAGGAGCTGACCGACAGTCAGCAGCAGGACCTCACAGCCTTCTTGCAGCTGGTGGGATACAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | GTCTGGATCCCCACCATGCCTCCACACGTCTCCTCCGACTGCACATaGTCAGAAATCACGCACTTCTGCGTGGTCATGATCTTCTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VWIPTMPPHVSSDCT*SEITHFCVVMIFCV Trigger: GACGCAGAAGATCATGACCACGCAGAAGTGCGTGATTTCTGAGCATGTGCAGTCGGAGGAGACGTGTGGAGGCATGGTGGGGATCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGATCTCCAGCACTACATaGGTGTCCGTGGTGACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QVVLPSVTPVSVQWASDEISSTT*VSVVTV Trigger: GACGGTCACCACGGACACCAATGTAGTGCTGGAGAT...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | GTCTTGGTCTGGATCCCCACCATGCCTCCACACGTCTCCTCCGACTaGACATGCTCAGAAATCACGCACTTCTGCGTGGTCATGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLVWIPTMPPHVSSD*TCSEITHFCVVMIF Trigger: GAAGATCATGACCACGCAGAAGTGCGTGATTTCTGAGCATGTGCAGTCGGAGGAGACGTGTGGAGGCATGGTGGGGATCCAGACCAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | TGCTGGGCAGGTAACACCGCAAAGGGATGGAAACTCCTCTCTAGGTaGAGGGTTGCTTGTTTTACAACTCGTAGGGGCCCGTCCTGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: CWAGNTAKGWKLLSR*RVACFTTRRGPSCE Trigger: TTCGCAGGACGGGCCCCTACGAGTTGTAAAACAAGCAACCCTGCACCTAGAGAGGAGTTTCCATCCCTTTGCGGTGTTACCTGCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | TCCTCTCCAGGGCAATGTCAGCAGAGGCAAACAATCGCTGCACGATaGCAAACCTCTCTGTGTCTCTCAGAGGAGCCAAGGTGGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSPGQCQQRQTIAAR*QTSLCLSEEPRWGC Trigger: ACAACCCCACCTTGGCTCCTCTGAGAGACACAGAGAGGTTTGGCATCGTGCAGCGATTGTTTGCCTCTGCTGACATTGCCCTGGAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGGACACCTGTATAGTCTaGGTCTGGATCCCCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: QVVLPSVTPVSVQWASDEDTCIV*VWIPTM Trigger: CATGGTGGGGATCCAGACCAAGACTATACAGGTGTC...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | GACACCAGGGATGAACCAGCAGCCGCAGTCCATTCCTTTCAGCACGCAGACACCGCCACCATGTTTCCCTaGGAGGAGGCAGAATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DTRDEPAAAVHSFQHADTATMFP*EEAEFK Trigger: TTTGAATTCTGCCTCCTCCAAGGGAAACATGGTGGC...GGTGTCTGCGTGCTGAAAGGAATGGACTGCGGCTGCTGGTTCATCCCTGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS TCA 90 bp | GATGCTCTCCTTGTATCCTGTATCCCACCAGCTGCAAGAAGGCTGTaGGGTCCTGCTGCTGACTGTCGGTCAGCTCCTCCATTGCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: DALLVSCIPPAARRL*GPAADCRSAPPLPI Trigger: TATTGGCAATGGAGGAGCTGACCGACAGTCAGCAGCAGGACCTCACAGCCTTCTTGCAGCTGGTGGGATACAGGATACAAGGAGAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | TGCACATGCTCAGAAATCACGCACTTCTGCGTGGTCATGATCTTCTaGGTCAGCACACACAGGACCTCGTTCCTGCTCTCTAGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CTCSEITHFCVVMIF*VSTHRTSFLLSSTC Trigger: GCAGGTGCTAGAGAGCAGGAACGAGGTCCTGTGTGTGCTGACGCAGAAGATCATGACCACGCAGAAGTGCGTGATTTCTGAGCATGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | GTTGCAAAGAGCTTCTGGTTGCTGACCTCATCCTGTGGGCCAGGATaGTCTCCTTGTATCCTGTATCCCACCAGCTGCAAGAAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VAKSFWLLTSSCGPG*SPCILYPTSCKKAV Trigger: CACAGCCTTCTTGCAGCTGGTGGGATACAGGATACAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGCAACCAGAAGCTCTTTGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | AACTGCATCCTCTCCAGGGCAATGTCAGCAGAGGCAAACAATCGCTaGACGATGCCAAACCTCTCTGTGTCTCTCAGAGGAGCCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NCILSRAMSAEANNR*TMPNLSVSLRGAKV Trigger: CACCTTGGCTCCTCTGAGAGACACAGAGAGGTTTGGCATCGTGCAGCGATTGTTTGCCTCTGCTGACATTGCCCTGGAGAGGATGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | TCATCAAACAGGATTTTCTGCAGGACACAGAACAGCGCCCTCTGCTaGTGGGCAGGTAACACCGCAAAGGGATGGAAACTCCTCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSNRIFCRTQNSALC*WAGNTAKGWKLLSR Trigger: CCTAGAGAGGAGTTTCCATCCCTTTGCGGTGTTACCTGCCCAGCAGCAGAGGGCGCTGTTCTGTGTCCTGCAGAAAATCCTGTTTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | GGGAAGATGCAAGAGTCCTTCAGGATGGTGGCTTTCGCAGAAAACTaGATCCTCTCCAGGGCAATGTCAGCAGAGGCAAACAATCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKMQESFRMVAFAEN*ILSRAMSAEANNRC Trigger: GCAGCGATTGTTTGCCTCTGCTGACATTGCCCTGGAGAGGATGCAGTTTTCTGCGAAAGCCACCATCCTGAAGGACTCTTGCATCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS CCA 90 bp | GAAGTAGGCTGTTGCAAAGAGCTTCTGGTTGCTGACCTCATCCTGTaGGCCAGGATGCTCTCCTTGTATCCTGTATCCCACCAGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EVGCCKELLVADLIL*ARMLSLYPVSHQLQ Trigger: TTGCAGCTGGTGGGATACAGGATACAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGCAACCAGAAGCTCTTTGCAACAGCCTACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS TCA 90 bp | TGCGTCAGCACACACAGGACCTCGTTCCTGCTCTCTAGCACCTGCTaGAGTACCAGGTTGTCCATATTAACTGTTCTCTTGACGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CVSTHRTSFLLSSTC*STRLSILTVLLTAS Trigger: GGATGCCGTCAAGAGAACAGTTAATATGGACAACCTGGTACTTCAGCAGGTGCTAGAGAGCAGGAACGAGGTCCTGTGTGTGCTGACGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | AGGTTGTCCATATTAACTGTTCTCTTGACGGCATCCTGGATGAGCTaGTGCACGTCCACCTCCTGCTTCCTCAGGGTTCCAAACGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLSILTVLLTASWMS*CTSTSCFLRVPNEE Trigger: CTCTTCGTTTGGAACCCTGAGGAAGCAGGAGGTGGACGTGCAGCAGCTCATCCAGGATGCCGTCAAGAGAACAGTTAATATGGACAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS TCA 90 bp | CCCGCTCTTATGGTTCTCACACTTGCTCTCGTATTTCACGAAGTCTaGCTCCACAACCACTGGACTGAGACAGTGCCCTTCTGTGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PALMVLTLALVFHEV*LHNHWTETVPFCEY Trigger: GTACTCACAGAAGGGCACTGTCTCAGTCCAGTGGTTGTGGAGTCAGACTTCGTGAAATACGAGAGCAAGTGTGAGAACCATAAGAGCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
||
| CDS TCA 90 bp | GGAGGCAGAATTCAAACTGGCCATCTTGTTTCACAAACAGCTCCATaGTGCCATAGGCAATGGTGGTGGCAGCAGGGATCTCCAGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: GGRIQTGHLVSQTAP*CHRQWWWQQGSPAL Trigger: TAGTGCTGGAGATCCCTGCTGCCACCACCATTGCCTATGGCATCATGGAGCTGTTTGTGAAACAAGATGGCCAGTTTGAATTCTGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS CCA 90 bp | TTCAGCTTGACCTTCCCCACGACTGTCCCAATAGCCCCGCTCTTATaGTTCTCACACTTGCTCTCGTATTTCACGAAGTCTGACTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FSLTFPTTVPIAPLL*FSHLLSYFTKSDST Trigger: TGTGGAGTCAGACTTCGTGAAATACGAGAGCAAGTGTGAGAACCATAAGAGCGGGGCTATTGGGACAGTCGTGGGGAAGGTCAAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTGGTTCTTCCCTCAGTGACTCCAGTGTCAGTGCAGTGGGCCTCTGATGAGTTCAAACTGGCCATCTaGTTTCACAAACAGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QVVLPSVTPVSVQWASDEFKLAI*FHKQLH Trigger: ATGGAGCTGTTTGTGAAACAAGATGGCCAGTTTGAA...CTCATCAGAGGCCCACTGCACTGACACTGGAGTCACTGAGGGAAGAACCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | GATCTACAGCACAGTGGCTGCACTGGGACAGGTGGGGTATGGCTTATTTTATTAGCAAAGAGCTTCTGGTaGCTGACCTCATCCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DLQHSGCTGTGGVWLILLAKSFW*LTSSCG Trigger: CCCACAGGATGAGGTCAGCAACCAGAAGCTCTTTGC...TAATAAAATAAGCCATACCCCACCTGTCCCAGTGCAGCCACTGTGCTGTAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTGCAGTGGGCCTCTGATGAGAATAACCCATTGACAACGCTCGCAGCCATTTCTTCCTCATGCTCTTaGCTTAGAGTGCTGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVQWASDENNPLTTLAAISSSCS*LRVLSP Trigger: TGGGCTCAGCACTCTAAGCAAAGAGCATGAGGAAGA...AATGGCTGCGAGCGTTGTCAATGGGTTATTCTCATCAGAGGCCCACTGCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATACCACCAACGTTCAGCTaGACCTTCCCCACGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EIATCDKFPERTGIAPDIPPTFS*TFPTTV Trigger: GACAGTCGTGGGGAAGGTCAAGCTGAACGTTGGTGG...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTTTGGCAGCAGTTCAGTCCCATAGCAAACACCAAATACGACTCAGCAGCTGACACCTGTATAGTCTaGGTCTGGATCCCCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLWQQFSPIANTKYDSAADTCIV*VWIPTM Trigger: CATGGTGGGGATCCAGACCAAGACTATACAGGTGTC...AGCTGCTGAGTCGTATTTGGTGTTTGCTATGGGACTGAACTGCTGCCAAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS TCA 90 bp | TCCTCATGCTCTTTGCTTAGAGTGCTGAGCCCACTTAGAGTGATGTaGAGAATTAGCGGGAAGATGCAAGAGTCCTTCAGGATGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSCSLLRVLSPLRVM*RISGKMQESFRMVA Trigger: AGCCACCATCCTGAAGGACTCTTGCATCTTCCCGCTAATTCTTCACATCACTCTAAGTGGGCTCAGCACTCTAAGCAAAGAGCATGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS GCA 90 bp | TCGTATTTCACGAAGTCTGACTCCACAACCACTGGACTGAGACAGTaGCCTTCTGTGAGTACATCTTCCAGGGTGGCAGATAAAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYFTKSDSTTTGLRQ*PSVSTSSRVADKIW Trigger: CCAGATTTTATCTGCCACCCTGGAAGATGTACTCACAGAAGGGCACTGTCTCAGTCCAGTGGTTGTGGAGTCAGACTTCGTGAAATACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
||
| CDS CCA 90 bp | CAGTGCCCTTCTGTGAGTACATCTTCCAGGGTGGCAGATAAAATCTaGTACTTGGGTCTCTGCCAGCACCAGTATCTCTTCTTTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QCPSVSTSSRVADKI*YLGLCQHQYLFFLV Trigger: GACCAAAAAGAAGAGATACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTATCTGCCACCCTGGAAGATGTACTCACAGAAGGGCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
||
| CDS CCA 90 bp | TCATCAGACAGAGCATGGAGCAAGCAGCACAGCGAAGAAATAACATaGAGTTTGCAGCAAGTCCCCAGGAAAACTGTGGCATTATCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSDRAWSKQHSEEIT*SLQQVPRKTVALSG Trigger: GCCTGATAATGCCACAGTTTTCCTGGGGACTTGCTGCAAACTCCATGTTATTTCTTCGCTGTGCTGCTTGCTCCATGCTCTGTCTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTGAAGGATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGACACCTGTATAGTCTaGGTCTGGATCCCCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: CLKDGKEIASLLHSQLMMDTCIV*VWIPTM Trigger: CATGGTGGGGATCCAGACCAAGACTATACAGGTGTC...CATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTGAAGGATGGGAAGGAAATTGCTTCCCTGTTGCATTCCCAGCTTATGATGGATAAAATCTGGTACTaGGGTCTCTGCCAGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLKDGKEIASLLHSQLMMDKIWY*GLCQHQ Trigger: CTGGTGCTGGCAGAGACCCAAGTACCAGATTTTATC...CATCATAAGCTGGGAATGCAACAGGGAAGCAATTTCCTTCCCATCCTTCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCACCACCAACGTTCAGCTaGACCTTCCCCACGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIEIATCDKFPERTGIAPPPTFS*TFPTTV Trigger: GACAGTCGTGGGGAAGGTCAAGCTGAACGTTGGTGG...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATAGCCACCATGTTTCCCTaGGAGGAGGCAGAATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EIATCDKFPERTGIAPDIATMFP*EEAEFK Trigger: TTTGAATTCTGCCTCCTCCAAGGGAAACATGGTGGC...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGAAATGTTCCATATTCCCCAGTGTACCTTCATGCTGTCTTATGAAGCCTGCCACCATGTTTCCCTaGGAGGAGGCAGAATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HRKCSIFPSVPSCCLMKPATMFP*EEAEFK Trigger: TTTGAATTCTGCCTCCTCCAAGGGAAACATGGTGGC...AGGCTTCATAAGACAGCATGAAGGTACACTGGGGAATATGGAACATTTCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS GCA 90 bp | AGTACATCTTCCAGGGTGGCAGATAAAATCTGGTACTTGGGTCTCTaGCAGCACCAGTATCTCTTCTTTTTGGTCACCAGACTTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: STSSRVADKIWYLGL*QHQYLFFLVTRLRS Trigger: ACTTCTAAGTCTGGTGACCAAAAAGAAGAGATACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTATCTGCCACCCTGGAAGATGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | GATTCAACCTCTCTTCTAGCCCACCACCCAGCAGAGGTAGTGGAAGAGAAAAGTCAGTATCTCTTCTTTTaGGTCACCAGACTTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DSTSLLAHHPAEVVEEKSQYLFF*VTRLRS Trigger: ACTTCTAAGTCTGGTGACCAAAAAGAAGAGATACTG...ACTTTTCTCTTCCACTACCTCTGCTGGGTGGTGGGCTAGAAGAGAGGTTGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CAA 90 bp | TTGGAAAAATTTTATCAGCAGAGCAGTCTATCCACTCAGTATTTCTACCATCTGCCACCAACGTTCAGCTaGACCTTCCCCACGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LEKFYQQSSLSTQYFYHLPPTFS*TFPTTV Trigger: GACAGTCGTGGGGAAGGTCAAGCTGAACGTTGGTGG...CAGATGGTAGAAATACTGAGTGGATAGACTGCTCTGCTGATAAAATTTTTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CAA 90 bp | ATTTTATACCATAGCTTCTGTGATCTTTCCTTAACTGGTTCCAGGAAAACACACCCACCAACGTTCAGCTaGACCTTCCCCACGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILYHSFCDLSLTGSRKTHPPTFS*TFPTTV Trigger: GACAGTCGTGGGGAAGGTCAAGCTGAACGTTGGTGG...GTGTGTTTTCCTGGAACCAGTTAAGGAAAGATCACAGAAGCTATGGTATAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAGTATATTTACTGCCCTACAGTAGAGTTTTCACCTTCAGTCTTACAGTGGCAAAGAGCTTCTGGTaGCTGACCTCATCCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NGVYLLPYSRVFTFSLTVAKSFW*LTSSCG Trigger: CCCACAGGATGAGGTCAGCAACCAGAAGCTCTTTGC...CACTGTAAGACTGAAGGTGAAAACTCTACTGTAGGGCAGTAAATATACTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| CDS-3UTR CAA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGCCACCATGTTTCCCTaGGAGGAGGCAGAATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LIEIATCDKFPERTGIAPATMFP*EEAEFK Trigger: TTTGAATTCTGCCTCCTCCAAGGGAAACATGGTGGC...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR CAA 90 bp | TTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCATCTTCCTCATGCTCTTaGCTTAGAGTGCTGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LIEIATCDKFPERTGIAPSSSCS*LRVLSP Trigger: TGGGCTCAGCACTCTAAGCAAAGAGCATGAGGAAGA...TGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR CAA 90 bp | ACAAGTCATTTAACCTTAGGCAATGGAGTATATTTACTGCCCTACAGTAGAGTTGACACCTGTATAGTCTaGGTCTGGATCCCCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: TSHLTLGNGVYLLPYSRVDTCIV*VWIPTM Trigger: CATGGTGGGGATCCAGACCAAGACTATACAGGTGTC...AACTCTACTGTAGGGCAGTAAATATACTCCATTGCCTAAGGTTAAATGACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTGTTCCAAGGGATTTGCTGTGAGAATTCTTATAACATCTGTAATGTATATCTCCAGCACTACATaGGTGTCCGTGGTGACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSKGFAVRILITSVMYISSTT*VSVVTV Trigger: GACGGTCACCACGGACACCAATGTAGTGCTGGAGAT...ATACATTACAGATGTTATAAGAATTCTCACAGCAAATCCCTTGGAACAAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CAA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATATTCAAACTGGCCATCTaGTTTCACAAACAGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EIATCDKFPERTGIAPDIFKLAI*FHKQLH Trigger: ATGGAGCTGTTTGTGAAACAAGATGGCCAGTTTGAA...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR CAA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCGCAAAGAGCTTCTGGTaGCTGACCTCATCCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSELLLIEIATCDKFPERAKSFW*LTSSCG Trigger: CCCACAGGATGAGGTCAGCAACCAGAAGCTCTTTGC...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS-3UTR CAA 90 bp | GAAATTGCAACATGTGACAAATTCCCAGAACGCACTGGAATTGCCCCAGACATACAGTATCTCTTCTTTTaGGTCACCAGACTTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EIATCDKFPERTGIAPDIQYLFF*VTRLRS Trigger: ACTTCTAAGTCTGGTGACCAAAAAGAAGAGATACTG...TATGTCTGGGGCAATTCCAGTGCGTTCTGGGAATTTGTCACATGTTGCAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS-3UTR CAA 90 bp | CACAGGAAATGTTCCATATTCCCCAGTGTACCTTCATGCTGTCTTATGAAGCCTCAGTATCTCTTCTTTTaGGTCACCAGACTTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HRKCSIFPSVPSCCLMKPQYLFF*VTRLRS Trigger: ACTTCTAAGTCTGGTGACCAAAAAGAAGAGATACTG...AGGCTTCATAAGACAGCATGAAGGTACACTGGGGAATATGGAACATTTCCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTGTTCCAAGGGATTTGCTGTGAGAATTCTTATAACATCTGTAATGTATTTCAAACTGGCCATCTaGTTTCACAAACAGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSCSKGFAVRILITSVMYFKLAI*FHKQLH Trigger: ATGGAGCTGTTTGTGAAACAAGATGGCCAGTTTGAA...ATACATTACAGATGTTATAAGAATTCTCACAGCAAATCCCTTGGAACAAGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101405.10 |
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| CDS-3UTR CAA 90 bp | AATACAGAACTCATGGATGCAAAGAAGCAGATAATGTATTTCCTCTTACTGTCTTTCAAACTGGCCATCTaGTTTCACAAACAGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NTELMDAKKQIMYFLLLSFKLAI*FHKQLH Trigger: ATGGAGCTGTTTGTGAAACAAGATGGCCAGTTTGAA...AGACAGTAAGAGGAAATACATTATCTGCTTCTTTGCATCCATGAGTTCTGTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGAATTGCTTTTAATAGAAATTGCAACATGTGACAAATTCCCAGAACGCCAGTATCTCTTCTTTTaGGTCACCAGACTTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSELLLIEIATCDKFPERQYLFF*VTRLRS Trigger: ACTTCTAAGTCTGGTGACCAAAAAGAAGAGATACTG...GCGTTCTGGGAATTTGTCACATGTTGCAATTTCTATTAAAAGCAATTCTGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS TCA 72 bp | CCCACCAGCTGCAAGAAGGCTGTGAGGTCCTGCTGCTaGCTGTCGGTCAGCTCCTCCATTGCCAATACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PTSCKKAVRSCC*LSVSSSIANTA Trigger: GGCTGTATTGGCAATGGAGGAGCTGACCGACAGTCAGCAGCAGGACCTCACAGCCTTCTTGCAGCTGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
||
| CDS CAA 72 bp | GCAATGGTGGTGGCAGCAGGGATCTCCAGCACTACATaGGTGTCCGTGGTGACCGTCCCATCCTCCGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AMVVAAGISSTT*VSVVTVPSSVA Trigger: AGCAACGGAGGATGGGACGGTCACCACGGACACCAATGTAGTGCTGGAGATCCCTGCTGCCACCACCATTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS TCA 72 bp | ACAACTCGTAGGGGCCCGTCCTGCGAAGAGATCCCTTaGCCCCCATCCAGCATGTCCAGAAAGGCGAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: TTRRGPSCEEIP*PPSSMSRKANS Trigger: AGAGTTCGCCTTTCTGGACATGCTGGATGGGGGTCAAGGGATCTCTTCGCAGGACGGGCCCCTACGAGTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | TGGATCCCCACCATGCCTCCACACGTCTCCTCCGACTaGACATGCTCAGAAATCACGCACTTCTGCGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WIPTMPPHVSSD*TCSEITHFCVV Trigger: GACCACGCAGAAGTGCGTGATTTCTGAGCATGTGCAGTCGGAGGAGACGTGTGGAGGCATGGTGGGGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS CCA 72 bp | CCATCCTCCGTTGCTGACACCTGTATAGTCTTGGTCTaGATCCCCACCATGCCTCCACACGTCTCCTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSSVADTCIVLV*IPTMPPHVSSD Trigger: GTCGGAGGAGACGTGTGGAGGCATGGTGGGGATCCAGACCAAGACTATACAGGTGTCAGCAACGGAGGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS CAA 72 bp | ACCGTCCCATCCTCCGTTGCTGACACCTGTATAGTCTaGGTCTGGATCCCCACCATGCCTCCACACGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVPSSVADTCIV*VWIPTMPPHVS Trigger: GGAGACGTGTGGAGGCATGGTGGGGATCCAGACCAAGACTATACAGGTGTCAGCAACGGAGGATGGGACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS CAA 90 bp | GAGCTTCTGGTTGCTGACCTCATCCTGTGGGCCAGGATGCTCTCCTaGTATCCTGTATCCCACCAGCTGCAAGAAGGCTGTGAGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ELLVADLILWARMLS*YPVSHQLQEGCEVL Trigger: CAGGACCTCACAGCCTTCTTGCAGCTGGTGGGATACAGGATACAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGCAACCAGAAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS TCA 72 bp | CTTGTATCCTGTATCCCACCAGCTGCAAGAAGGCTGTaGGGTCCTGCTGCTGACTGTCGGTCAGCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LVSCIPPAARRL*GPAADCRSAPP Trigger: TGGAGGAGCTGACCGACAGTCAGCAGCAGGACCTCACAGCCTTCTTGCAGCTGGTGGGATACAGGATACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | AGGATTTTCTGCAGGACACAGAACAGCGCCCTCTGCTaGTGGGCAGGTAACACCGCAAAGGGATGGAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: RIFCRTQNSALC*WAGNTAKGWKL Trigger: GAGTTTCCATCCCTTTGCGGTGTTACCTGCCCAGCAGCAGAGGGCGCTGTTCTGTGTCCTGCAGAAAATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | AGGGCCCGAAGGAGTTCTTCATCAAACAGGATTTTCTaGAGGACACAGAACAGCGCCCTCTGCTGCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RARRSSSSNRIF*RTQNSALCCWA Trigger: TGCCCAGCAGCAGAGGGCGCTGTTCTGTGTCCTGCAGAAAATCCTGTTTGATGAAGAACTCCTTCGGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | GAGGACCAGAGACCACCAGCCACATCATCACACACTTaGTCCAGGGCCCGAAGGAGTTCTTCATCAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: EDQRPPATSSHT*SRARRSSSSNR Trigger: CCTGTTTGATGAAGAACTCCTTCGGGCCCTGGAGCAAGTGTGTGATGATGTGGCTGGTGGTCTCTGGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | AGCTTCTGGTTGCTGACCTCATCCTGTGGGCCAGGATaGTCTCCTTGTATCCTGTATCCCACCAGCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFWLLTSSCGPG*SPCILYPTSCK Trigger: CTTGCAGCTGGTGGGATACAGGATACAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGCAACCAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | GGGCAATGTCAGCAGAGGCAAACAATCGCTGCACGATaGCAAACCTCTCTGTGTCTCTCAGAGGAGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQCQQRQTIAAR*QTSLCLSEEPR Trigger: CCTTGGCTCCTCTGAGAGACACAGAGAGGTTTGGCATCGTGCAGCGATTGTTTGCCTCTGCTGACATTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS CCA 72 bp | GCCCTCTGCTGCTGGGCAGGTAACACCGCAAAGGGATaGAAACTCCTCTCTAGGTGCAGGGTTGCTTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ALCCWAGNTAKG*KLLSRCRVACF Trigger: AAAACAAGCAACCCTGCACCTAGAGAGGAGTTTCCATCCCTTTGCGGTGTTACCTGCCCAGCAGCAGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS CAA 72 bp | GTTGCTGACCTCATCCTGTGGGCCAGGATGCTCTCCTaGTATCCTGTATCCCACCAGCTGCAAGAAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VADLILWARMLS*YPVSHQLQEGC Trigger: ACAGCCTTCTTGCAGCTGGTGGGATACAGGATACAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS TCA 72 bp | GCACATGCTCAGAAATCACGCACTTCTGCGTGGTCATaGTCTTCTGCGTCAGCACACACAGGACCTCGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AHAQKSRTSAWS*SSASAHTGPRS Trigger: GGAACGAGGTCCTGTGTGTGCTGACGCAGAAGATCATGACCACGCAGAAGTGCGTGATTTCTGAGCATGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS TCA 72 bp | CCAGGAAGTAGGCTGTTGCAAAGAGCTTCTGGTTGCTaGCCTCATCCTGTGGGCCAGGATGCTCTCCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PGSRLLQRASGC*PHPVGQDALLV Trigger: TACAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGCAACCAGAAGCTCTTTGCAACAGCCTACTTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | GGTAACACCGCAAAGGGATGGAAACTCCTCTCTAGGTaGAGGGTTGCTTGTTTTACAACTCGTAGGGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GNTAKGWKLLSR*RVACFTTRRGP Trigger: CGGGCCCCTACGAGTTGTAAAACAAGCAACCCTGCACCTAGAGAGGAGTTTCCATCCCTTTGCGGTGTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | AACAGGATTTTCTGCAGGACACAGAACAGCGCCCTCTaGTGCTGGGCAGGTAACACCGCAAAGGGATGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: NRIFCRTQNSAL*CWAGNTAKGWK Trigger: TTTCCATCCCTTTGCGGTGTTACCTGCCCAGCAGCAGAGGGCGCTGTTCTGTGTCCTGCAGAAAATCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | CTCTCCAGGGCAATGTCAGCAGAGGCAAACAATCGCTaGACGATGCCAAACCTCTCTGTGTCTCTCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSRAMSAEANNR*TMPNLSVSLRG Trigger: TCCTCTGAGAGACACAGAGAGGTTTGGCATCGTGCAGCGATTGTTTGCCTCTGCTGACATTGCCCTGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | ATATTAACTGTTCTCTTGACGGCATCCTGGATGAGCTaGTGCACGTCCACCTCCTGCTTCCTCAGGGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ILTVLLTASWMS*CTSTSCFLRVP Trigger: TGGAACCCTGAGGAAGCAGGAGGTGGACGTGCAGCAGCTCATCCAGGATGCCGTCAAGAGAACAGTTAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | CAAGAGTCCTTCAGGATGGTGGCTTTCGCAGAAAACTaGATCCTCTCCAGGGCAATGTCAGCAGAGGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: QESFRMVAFAEN*ILSRAMSAEAN Trigger: GTTTGCCTCTGCTGACATTGCCCTGGAGAGGATGCAGTTTTCTGCGAAAGCCACCATCCTGAAGGACTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS CCA 72 bp | TGTTGCAAAGAGCTTCTGGTTGCTGACCTCATCCTGTaGGCCAGGATGCTCTCCTTGTATCCTGTATCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CCKELLVADLIL*ARMLSLYPVSH Trigger: GTGGGATACAGGATACAAGGAGAGCATCCTGGCCCACAGGATGAGGTCAGCAACCAGAAGCTCTTTGCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS CAA 90 bp | TTCCCCACGACTGTCCCAATAGCCCCGCTCTTATGGTTCTCACACTaGCTCTCGTATTTCACGAAGTCTGACTCCACAACCACTGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: FPTTVPIAPLLWFSH*LSYFTKSDSTTTGL Trigger: CAGTCCAGTGGTTGTGGAGTCAGACTTCGTGAAATACGAGAGCAAGTGTGAGAACCATAAGAGCGGGGCTATTGGGACAGTCGTGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
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| CDS CAA 90 bp | GCCACCATGTTTCCCTTGGAGGAGGCAGAATTCAAACTGGCCATCTaGTTTCACAAACAGCTCCATGATGCCATAGGCAATGGTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATMFPLEEAEFKLAI*FHKQLHDAIGNGGG Trigger: GCCACCACCATTGCCTATGGCATCATGGAGCTGTTTGTGAAACAAGATGGCCAGTTTGAATTCTGCCTCCTCCAAGGGAAACATGGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS CCA 72 bp | ACCTTCCCCACGACTGTCCCAATAGCCCCGCTCTTATaGTTCTCACACTTGCTCTCGTATTTCACGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TFPTTVPIAPLL*FSHLLSYFTKS Trigger: AGACTTCGTGAAATACGAGAGCAAGTGTGAGAACCATAAGAGCGGGGCTATTGGGACAGTCGTGGGGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
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| CDS CCA 72 bp | TGCCAAACCTCTCTGTGTCTCTCAGAGGAGCCAAGGTaGGGTTGTGAAAATCACACACGCTGTCATCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: CQTSLCLSEEPR*GCENHTRCHQT Trigger: TGTCTGATGACAGCGTGTGTGATTTTCACAACCCCACCTTGGCTCCTCTGAGAGACACAGAGAGGTTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS CCA 72 bp | GAAGAATTAGCGGGAAGATGCAAGAGTCCTTCAGGATaGTGGCTTTCGCAGAAAACTGCATCCTCTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EELAGRCKSPSG*WLSQKTASSPG Trigger: CCCTGGAGAGGATGCAGTTTTCTGCGAAAGCCACCATCCTGAAGGACTCTTGCATCTTCCCGCTAATTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS TCA 72 bp | ATGGTTCTCACACTTGCTCTCGTATTTCACGAAGTCTaGCTCCACAACCACTGGACTGAGACAGTGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MVLTLALVFHEV*LHNHWTETVPF Trigger: GAAGGGCACTGTCTCAGTCCAGTGGTTGTGGAGTCAGACTTCGTGAAATACGAGAGCAAGTGTGAGAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
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| CDS CCA 72 bp | AGAGCATGGAGCAAGCAGCACAGCGAAGAAATAACATaGAGTTTGCAGCAAGTCCCCAGGAAAACTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RAWSKQHSEEIT*SLQQVPRKTVA Trigger: TGCCACAGTTTTCCTGGGGACTTGCTGCAAACTCCATGTTATTTCTTCGCTGTGCTGCTTGCTCCATGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
||
| CDS CAA 72 bp | ACTGTCCCAATAGCCCCGCTCTTATGGTTCTCACACTaGCTCTCGTATTTCACGAAGTCTGACTCCACAACC | + |
|
Preference number: 6 (lower is better) Translates to: TVPIAPLLWFSH*LSYFTKSDSTT Trigger: GGTTGTGGAGTCAGACTTCGTGAAATACGAGAGCAAGTGTGAGAACCATAAGAGCGGGGCTATTGGGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
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| CDS TCA 72 bp | ACACACAGGACCTCGTTCCTGCTCTCTAGCACCTGCTaGAGTACCAGGTTGTCCATATTAACTGTTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: THRTSFLLSSTC*STRLSILTVLL Trigger: CAAGAGAACAGTTAATATGGACAACCTGGTACTTCAGCAGGTGCTAGAGAGCAGGAACGAGGTCCTGTGTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS TCA 72 bp | AAACTGTGGCATTATCAGGCATTTCTGCTAGTGCGCTaGCCAGGAAGTAGGCTGTTGCAAAGAGCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: KLWHYQAFLLVR*PGSRLLQRASG Trigger: ACCAGAAGCTCTTTGCAACAGCCTACTTCCTGGTCAGCGCACTAGCAGAAATGCCTGATAATGCCACAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031845.13 ENSMUST00000165099.8 ENSMUST00000170142.8 |
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| CDS GCA 72 bp | TCCAGGGTGGCAGATAAAATCTGGTACTTGGGTCTCTaGCAGCACCAGTATCTCTTCTTTTTGGTCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: SRVADKIWYLGL*QHQYLFFLVTR Trigger: TCTGGTGACCAAAAAGAAGAGATACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTATCTGCCACCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
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| CDS CCA 72 bp | TCTGTGAGTACATCTTCCAGGGTGGCAGATAAAATCTaGTACTTGGGTCTCTGCCAGCACCAGTATCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SVSTSSRVADKI*YLGLCQHQYLF Trigger: GAAGAGATACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTATCTGCCACCCTGGAAGATGTACTCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
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| CDS CAA 72 bp | CCACCCAAGCAGCACAGCGAAGAAATAACATGGAGTTaGCAGCAAGTCCCCAGGAAAACTGTGGCATTATCA | + |
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Preference number: 6 (lower is better) Translates to: PPKQHSEEITWS*QQVPRKTVALS Trigger: TGATAATGCCACAGTTTTCCTGGGGACTTGCTGCAAACTCCATGTTATTTCTTCGCTGTGCTGCTTGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165099.8 |
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| CDS CAA 90 bp | CCTTCTGTGAGTACATCTTCCAGGGTGGCAGATAAAATCTGGTACTaGGGTCTCTGCCAGCACCAGTATCTCTTCTTTTTGGTCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSVSTSSRVADKIWY*GLCQHQYLFFLVTR Trigger: TCTGGTGACCAAAAAGAAGAGATACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTATCTGCCACCCTGGAAGATGTACTCACAGAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
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| CDS CAA 90 bp | GACAGAGCATGGAGCAAGCAGCACAGCGAAGAAATAACATGGAGTTaGCAGCAAGTCCCCAGGAAAACTGTGGCATTATCAGGCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: DRAWSKQHSEEITWS*QQVPRKTVALSGIS Trigger: AGAAATGCCTGATAATGCCACAGTTTTCCTGGGGACTTGCTGCAAACTCCATGTTATTTCTTCGCTGTGCTGCTTGCTCCATGCTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS TCA 72 bp | TCTTTGCTTAGAGTGCTGAGCCCACTTAGAGTGATGTaGAGAATTAGCGGGAAGATGCAAGAGTCCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLLRVLSPLRVM*RISGKMQESFR Trigger: CCTGAAGGACTCTTGCATCTTCCCGCTAATTCTTCACATCACTCTAAGTGGGCTCAGCACTCTAAGCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS CCA 72 bp | GTACATCTTCCAGGGTGGCAGATAAAATCTGGTACTTaGGTCTCTGCCAGCACCAGTATCTCTTCTTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: VHLPGWQIKSGT*VSASTSISSFW Trigger: CCAAAAAGAAGAGATACTGGTGCTGGCAGAGACCCAAGTACCAGATTTTATCTGCCACCCTGGAAGATGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
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| CDS CAA 72 bp | TGGAGCAAGCAGCACAGCGAAGAAATAACATGGAGTTaGCAGCAAGTCCCCAGGAAAACTGTGGCATTATCA | + |
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Preference number: 6 (lower is better) Translates to: WSKQHSEEITWS*QQVPRKTVALS Trigger: TGATAATGCCACAGTTTTCCTGGGGACTTGCTGCAAACTCCATGTTATTTCTTCGCTGTGCTGCTTGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031845.13 ENSMUST00000170142.8 |
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| CDS CAA 90 bp | AAAATCTGGTACTTGGGTCTCTGCCAGCACCAGTATCTCTTCTTTTaGGTCACCAGACTTAGAAGTTGCAGCTTGTCAGAGTCGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: KIWYLGLCQHQYLFF*VTRLRSCSLSESFK Trigger: CTTGAACGACTCTGACAAGCTGCAACTTCTAAGTCTGGTGACCAAAAAGAAGAGATACTGGTGCTGGCAGAGACCCAAGTACCAGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031845.13 ENSMUST00000101405.10 ENSMUST00000165099.8 ENSMUST00000167893.2 ENSMUST00000170142.8 |
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