Pregenerated sensors for GSDMD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022575Ensembl transcript IDs: ENSMUST00000023238.6, ENSMUST00000229331.2, ENSMUST00000230514.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTaGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCCCACAGG | + |
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Preference number: 1 (lower is better) Translates to: FLASQRLGLARFYLG*RVGHGDVVGREAHR Trigger: CCTGTGGGCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| 3UTR CCA 90 bp | ATGGTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTaGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: MVLGFPKARLGKILP*LEGRTWRCCGKGGP Trigger: TGGGCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| 3UTR CCA 72 bp | TCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTaGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SQRLGLARFYLG*RVGHGDVVGRE Trigger: CTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| 3UTR CCA 72 bp | GGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTaGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GFPKARLGKILP*LEGRTWRCCGK Trigger: CTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| 3UTR TCA 72 bp | TTCCCAACTTCTGGATCTCAGTGCATTATAACCCTGTaGCTGAGTATGGTTCTTGGCTTCCCAAAGGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: FPTSGSQCIITL*LSMVLGFPKAR Trigger: CCTAGCCTTTGGGAAGCCAAGAACCATACTCAGTCACAGGGTTATAATGCACTGAGATCCAGAAGTTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | GTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGGTCCACCTGGCCGCCACTaGACAGGCCCTGCCCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: VLGFPKARLGKILPWLEGPPGRH*TGPALV Trigger: CACTAGGGCAGGGCCTGTGCAGTGGCGGCCAGGTGG...ACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | TTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCCCACGCTCCTGCCACGGGGTaGTCTGTTCCAAGACGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FYLGWRVGHGDVVGREAHAPATG*SVPRRA Trigger: AGCACGTCTTGGAACAGAGCACCCCGTGGCAGGAGC...GTGGGCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | CTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGGTAGGAAGGATGCAGCCAGCTaGGCCGTCCAGAGGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGFPKARLGKILPWLEGRKDAAS*AVQRLH Trigger: GTGGAGCCTCTGGACGGCCCAGCTGGCTGCATCCTT...CCTACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR TCA 90 bp | CTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCCCACAGCAACTCCAGCTGCTTTaGCAGCACCGTTGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LPWLEGRTWRCCGKGGPQQLQLL*QHRCLQ Trigger: CTGGAGACAACGGTGCTGTCAAAGCAGCTGGAGTTG...CTGTGGGCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | TTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCCCACTGGCCTGAGCCCTCTTaGCTGTGGACCTCAGTGATC | + |
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Preference number: 4 (lower is better) Translates to: FYLGWRVGHGDVVGREAHWPEPS*LWTSVI Trigger: GATCACTGAGGTCCACAGCCAAGAGGGCTCAGGCCA...GTGGGCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | CTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCCCACAGAGGTGCCTTTCATGCTaGATGGTCTCCCAGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPWLEGRTWRCCGKGGPQRCLSC*MVSQVF Trigger: GAAGACCTGGGAGACCATGCAGCATGAAAGGCACCT...CTGTGGGCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR TCA 90 bp | ATGGTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGCAGCGTAAACTGGCCTaGGCCCTCTTGGCTGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: MVLGFPKARLGKILPWLEQRKLA*ALLAVD Trigger: GTCCACAGCCAAGAGGGCTCAGGCCAGTTTACGCTG...CTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | GTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGGTAGCACATTGAGGCCATaGTGCCTCTGGCCCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: VLGFPKARLGKILPWLEGSTLRP*CLWPTA Trigger: AGCAGTGGGCCAGAGGCACCATGGCCTCAATGTGCT...ACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | GTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGGTGCTAGCAGCTGCTGCTaGGTTTCACTCAGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLGFPKARLGKILPWLEGASSCC*VSLSTA Trigger: GGCTGTGCTGAGTGAAACCCAGCAGCAGCTGCTAGC...ACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR TCA 90 bp | ATGGTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGCCCTTCTCCCATGCCTaGCAACATCACTCTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: MVLGFPKARLGKILPWLEPFSHA*QHHSAL Trigger: CAGGGCAGAGTGATGTTGTCAGGCATGGGAGAAGGG...CTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR TCA 90 bp | GTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGGTGGCTGTGGACCTCAGTaGTCTGCACTTCCTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VLGFPKARLGKILPWLEGGCGPQ*SALPPL Trigger: CAAAGGAGGAAGTGCAGATCACTGAGGTCCACAGCC...ACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | TGGTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGCTCGGAATGCCAGGATaGTGCCTGCAGGAATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: WFLASQRLGLARFYLGWRLGMPG*CLQEWS Trigger: TGACCATTCCTGCAGGCAGCATCCTGGCATTCCGAG...CCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | TGGTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGTGCTGCCTGCAGGAATaGTCACCATCTTCTTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: WFLASQRLGLARFYLGWRCCLQE*SPSSSG Trigger: GCCGGAAGAAGATGGTGACCATTCCTGCAGGCAGCA...CCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR TCA 90 bp | CTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGGTAGGAACATCACTCTGCCCTaGATGTTCCCATCGACGACA | + |
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Preference number: 4 (lower is better) Translates to: LGFPKARLGKILPWLEGRNITLP*MFPSTT Trigger: TGTCGTCGATGGGAACATTCAGGGCAGAGTGATGTT...CCTACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | TTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCCCACTTTTCCCTTCTCCCATaGCTGACAACATCACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FYLGWRVGHGDVVGREAHFSLLP*LTTSLC Trigger: GCAGAGTGATGTTGTCAGGCATGGGAGAAGGGAAAA...GTGGGCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | ATTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCCCATGGACCTCAGTGATCTaGACTTCCTCCTTTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ILPWLEGRTWRCCGKGGPWTSVI*TSSFVC Trigger: GCAGACAAAGGAGGAAGTGCAGATCACTGAGGTCCA...TGGGCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | AAGATTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCGGCTTTGGTGGCCCTTaGCTTCACCCTTCAAGCATA | + |
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Preference number: 4 (lower is better) Translates to: KILPWLEGRTWRCCGKGGGFGGP*LHPSSI Trigger: TATGCTTGAAGGGTGAAGGCAAGGGCCACCAAAGCC...GCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | ATGGTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGCCTTTCATGCTGCATaGTCTCCCAGGTCTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: MVLGFPKARLGKILPWLEAFHAA*SPRSSE Trigger: CTCAGAAGACCTGGGAGACCATGCAGCATGAAAGGC...CTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR TCA 90 bp | TGGTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGCCTCTGTTTCTCATCTaGGACGAGAAGGATATCCCA | + |
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Preference number: 4 (lower is better) Translates to: WFLASQRLGLARFYLGWRPLFLI*DEKDIP Trigger: TGGGATATCCTTCTCGTCTCAGATGAGAAACAGAGG...CCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR TCA 90 bp | CTTGGCAAGATTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGCTCATCAATCCCATCTaGCAGGAGACTGAGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LGKILPWLEGRTWRCCGKLINPI*QETELL Trigger: AAGCAGCTCAGTCTCCTGTCAGATGGGATTGATGAG...CTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTTGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | AGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTCATTCATGGAGGCACTaGAACTGTCAGACACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RLGLARFYLGWRVGHGDVHSWRH*NCQTLQ Trigger: CTGCAGTGTCTGACAGTTCCAGTGCCTCCATGAATG...AACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | AGTTTTCCCAACTTCTGGATCTCAGTGCATTATAACCCTGTGACTGAGTATGGTCCAGACACTCAAGGATaGAGCCAGCTGGGCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SFPNFWISVHYNPVTEYGPDTQG*SQLGRP Trigger: TGGACGGCCCAGCTGGCTGCATCCTTGAGTGTCTGG...ACCATACTCAGTCACAGGGTTATAATGCACTGAGATCCAGAAGTTGGGAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | ATCTCAGTGCATTATAACCCTGTGACTGAGTATGGTTCTTGGCTTCCCAAAGGCATCTTCTTCCGGCTTTaGTGGCCCTTGCCTTCACCC | + |
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Preference number: 4 (lower is better) Translates to: ISVHYNPVTEYGSWLPKGIFFRL*WPLPSP Trigger: GGGTGAAGGCAAGGGCCACCAAAGCCGGAAGAAGAT...GCCTTTGGGAAGCCAAGAACCATACTCAGTCACAGGGTTATAATGCACTGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR TCA 90 bp | ATCTCAGTGCATTATAACCCTGTGACTGAGTATGGTTCTTGGCTTCCCAAAGGCGTCTCCCAGGTCTTCTaGGTCACACGCAGTATACAC | + |
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Preference number: 4 (lower is better) Translates to: ISVHYNPVTEYGSWLPKGVSQVF*VTRSIH Trigger: GTGTATACTGCGTGTGACTCAGAAGACCTGGGAGAC...GCCTTTGGGAAGCCAAGAACCATACTCAGTCACAGGGTTATAATGCACTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | ATCTCAGTGCATTATAACCCTGTGACTGAGTATGGTTCTTGGCTTCCCAAAGGCCTCTGTTCCAAGACGTaGTTCACCAACTCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ISVHYNPVTEYGSWLPKGLCSKT*FTNSSC Trigger: GCAGCTGGAGTTGGTGAAGCACGTCTTGGAACAGAG...GCCTTTGGGAAGCCAAGAACCATACTCAGTCACAGGGTTATAATGCACTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | AGTTTTCCCAACTTCTGGATCTCAGTGCATTATAACCCTGTGACTGAGTATGGTGCCTTAGCTAGCAGCTaGTGCTGGGTTTCACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFPNFWISVHYNPVTEYGALASS*CWVSLS Trigger: GCTGAGTGAAACCCAGCAGCAGCTGCTAGCTAAGGC...ACCATACTCAGTCACAGGGTTATAATGCACTGAGATCCAGAAGTTGGGAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | AGTTTTCCCAACTTCTGGATCTCAGTGCATTATAACCCTGTGACTGAGTATGGTTTCTTCCGGCTTTGGTaGCCCTTGCCTTCACCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SFPNFWISVHYNPVTEYGFFRLW*PLPSPF Trigger: GAAGGGTGAAGGCAAGGGCCACCAAAGCCGGAAGAA...ACCATACTCAGTCACAGGGTTATAATGCACTGAGATCCAGAAGTTGGGAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | CTTTCCTTTGTACATTTATTGAGTTTTCCCAACTTCTGGATCTCAGTGCATTATTTGGGCCACTCGGAATaGCAGGATGCTGCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSFVHLLSFPNFWISVHYLGHSE*QDAACR Trigger: CCTGCAGGCAGCATCCTGGCATTCCGAGTGGCCCAA...ATAATGCACTGAGATCCAGAAGTTGGGAAAACTCAATAAATGTACAAAGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | TTGAGTTTTCCCAACTTCTGGATCTCAGTGCATTATAACCCTGTGACTGAGTATCTGACAACATCACTCTaGCCTGAATGTTCCCATCGA | + |
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Preference number: 4 (lower is better) Translates to: LSFPNFWISVHYNPVTEYLTTSL*PECSHR Trigger: TCGATGGGAACATTCAGGGCAGAGTGATGTTGTCAG...ATACTCAGTCACAGGGTTATAATGCACTGAGATCCAGAAGTTGGGAAAACTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR CCA 90 bp | TCCTTTGTACATTTATTGAGTTTTCCCAACTTCTGGATCTCAGTGCATTATAACAGGCCATGGTGCCTCTaGCCCACTGCTTTTCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SFVHLLSFPNFWISVHYNRPWCL*PTAFLS Trigger: TGACAGAAAAGCAGTGGGCCAGAGGCACCATGGCCT...GTTATAATGCACTGAGATCCAGAAGTTGGGAAAACTCAATAAATGTACAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS-3UTR GCA 90 bp | CTTTCCTTTGTACATTTATTGAGTTTTCCCAACTTCTGGATCTCAGTGCATTATACATTGAGGCCATGGTaGCTCTGGCCCACTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LSFVHLLSFPNFWISVHYTLRPW*LWPTAF Trigger: AAAAGCAGTGGGCCAGAGGCACCATGGCCTCAATGT...ATAATGCACTGAGATCCAGAAGTTGGGAAAACTCAATAAATGTACAAAGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 90 bp | GCTGGGCCGTCCAGAGGCTCCACCTGGCCGCCACTGCACAGGCCCTaGCCTAGTGAGGCCTCTAAGGCTTCCATGCTGGGCTGGTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: AGPSRGSTWPPLHRP*PSEASKASMLGWSC Trigger: ACAGGACCAGCCCAGCATGGAAGCCTTAGAGGCCTCACTAGGGCAGGGCCTGTGCAGTGGCGGCCAGGTGGAGCCTCTGGACGGCCCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 90 bp | GGATGCAGCCAGCTGGGCCGTCCAGAGGCTCCACCTGGCCGCCACTaGACAGGCCCTGCCCTAGTGAGGCCTCTAAGGCTTCCATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GCSQLGRPEAPPGRH*TGPALVRPLRLPCW Trigger: CCAGCATGGAAGCCTTAGAGGCCTCACTAGGGCAGGGCCTGTGCAGTGGCGGCCAGGTGGAGCCTCTGGACGGCCCAGCTGGCTGCATCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 90 bp | GTTCCGGCACCAGTTCTCCAGAGTCAAGCACCAGACACTCAAGGATaGAGCCAGCTGGGCCGTCCAGAGGCTCCACCTGGCCGCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: VPAPVLQSQAPDTQG*SQLGRPEAPPGRHC Trigger: GCAGTGGCGGCCAGGTGGAGCCTCTGGACGGCCCAGCTGGCTGCATCCTTGAGTGTCTGGTGCTTGACTCTGGAGAACTGGTGCCGGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CCA 90 bp | CAGTTCTCCAGAGTCAAGCACCAGACACTCAAGGATGCAGCCAGCTaGGCCGTCCAGAGGCTCCACCTGGCCGCCACTGCACAGGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: QFSRVKHQTLKDAAS*AVQRLHLAATAQAL Trigger: CAGGGCCTGTGCAGTGGCGGCCAGGTGGAGCCTCTGGACGGCCCAGCTGGCTGCATCCTTGAGTGTCTGGTGCTTGACTCTGGAGAACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 90 bp | CAGTCCCCAAGGAGCACGGTGGGCAGGGACACAGAACTCTGCTCCTaGCACGGGGTGCTCTGTTCCAAGACGTGCTTCACCAACTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: QSPRSTVGRDTELCS*HGVLCSKTCFTNSS Trigger: GCTGGAGTTGGTGAAGCACGTCTTGGAACAGAGCACCCCGTGGCAGGAGCAGAGTTCTGTGTCCCTGCCCACCGTGCTCCTTGGGGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 90 bp | TCCCAGCAGTCCCCAAGGAGCACGGTGGGCAGGGACACAGAACTCTaGTCCTGCCACGGGGTGCTCTGTTCCAAGACGTGCTTCACCAAC | + |
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Preference number: 5 (lower is better) Translates to: SQQSPRSTVGRDTEL*SCHGVLCSKTCFTN Trigger: GTTGGTGAAGCACGTCTTGGAACAGAGCACCCCGTGGCAGGAGCAGAGTTCTGTGTCCCTGCCCACCGTGCTCCTTGGGGACTGCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 90 bp | CCCTCTTGGCTGTGGACCTCAGTGATCTGCACTTCCTCCTTTGTCTaGAGCACCTCGGTCACCACAAACAGGTCATCCCCACGACTCCGA | + |
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Preference number: 5 (lower is better) Translates to: PSWLWTSVICTSSFV*STSVTTNRSSPRLR Trigger: TCGGAGTCGTGGGGATGACCTGTTTGTGGTGACCGAGGTGCTGCAGACAAAGGAGGAAGTGCAGATCACTGAGGTCCACAGCCAAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
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| CDS GCA 90 bp | TTCACTCAGCACAGCCAGTGCTCCCAGCAGGTAGAAGATAGGGGCTaGGAGTTCCGGCACCAGTTCTCCAGAGTCAAGCACCAGACACTC | + |
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Preference number: 5 (lower is better) Translates to: FTQHSQCSQQVEDRG*EFRHQFSRVKHQTL Trigger: GAGTGTCTGGTGCTTGACTCTGGAGAACTGGTGCCGGAACTCGCAGCCCCTATCTTCTACCTGCTGGGAGCACTGGCTGTGCTGAGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CCA 90 bp | GCCAGGATGCTGCCTGCAGGAATGGTCACCATCTTCTTCCGGCTTTaGTGGCCCTTGCCTTCACCCTTCAAGCATAAAGCTCCAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ARMLPAGMVTIFFRL*WPLPSPFKHKAPGS Trigger: GCTGCCTGGAGCTTTATGCTTGAAGGGTGAAGGCAAGGGCCACCAAAGCCGGAAGAAGATGGTGACCATTCCTGCAGGCAGCATCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
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| CDS GCA 90 bp | GACACAGAACTCTGCTCCTGCCACGGGGTGCTCTGTTCCAAGACGTaGTTCACCAACTCCAGCTGCTTTGACAGCACCGTTGTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DTELCSCHGVLCSKT*FTNSSCFDSTVVSR Trigger: TCTGGAGACAACGGTGCTGTCAAAGCAGCTGGAGTTGGTGAAGCACGTCTTGGAACAGAGCACCCCGTGGCAGGAGCAGAGTTCTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS CCA 90 bp | CATAAAGCTCCAGGCAGCGTAAACTGGCCTGAGCCCTCTTGGCTGTaGACCTCAGTGATCTGCACTTCCTCCTTTGTCTGCAGCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HKAPGSVNWPEPSWL*TSVICTSSFVCSTS Trigger: CGAGGTGCTGCAGACAAAGGAGGAAGTGCAGATCACTGAGGTCCACAGCCAAGAGGGCTCAGGCCAGTTTACGCTGCCTGGAGCTTTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CCA 90 bp | AGCTGCTTTCCGATGGAACAAAGCGCAGCAAGCACATTGAGGCCATaGTGCCTCTGGCCCACTGCTTTTCTGTCACCTGAGGAGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCFPMEQSAASTLRP*CLWPTAFLSPEEGS Trigger: TGAGCCCTCCTCAGGTGACAGAAAAGCAGTGGGCCAGAGGCACCATGGCCTCAATGTGCTTGCTGCGCTTTGTTCCATCGGAAAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CCA 90 bp | AGGATGCTGCCTGCAGGAATGGTCACCATCTTCTTCCGGCTTTGGTaGCCCTTGCCTTCACCCTTCAAGCATAAAGCTCCAGGCAGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: RMLPAGMVTIFFRLW*PLPSPFKHKAPGSV Trigger: TACGCTGCCTGGAGCTTTATGCTTGAAGGGTGAAGGCAAGGGCCACCAAAGCCGGAAGAAGATGGTGACCATTCCTGCAGGCAGCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CCA 90 bp | TTCAAGCATAAAGCTCCAGGCAGCGTAAACTGGCCTGAGCCCTCTTaGCTGTGGACCTCAGTGATCTGCACTTCCTCCTTTGTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FKHKAPGSVNWPEPS*LWTSVICTSSFVCS Trigger: GCTGCAGACAAAGGAGGAAGTGCAGATCACTGAGGTCCACAGCCAAGAGGGCTCAGGCCAGTTTACGCTGCCTGGAGCTTTATGCTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CCA 90 bp | ATTCTACCTGCAGCCTTAGGCCACATTCTTCTAGCAAGACCCAGGTaGGATTCTTTTCATCCCAGCAGTCCCCAAGGAGCACGGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILPAALGHILLARPR*DSFHPSSPQGARWA Trigger: TGCCCACCGTGCTCCTTGGGGACTGCTGGGATGAAAAGAATCCCACCTGGGTCTTGCTAGAAGAATGTGGCCTAAGGCTGCAGGTAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS-3UTR CAA 90 bp | AAGATTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCTCTGCACTTCCTCCTTaGTCTGCAGCACCTCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KILPWLEGRTWRCCGKGGSALPP*SAAPRS Trigger: TGACCGAGGTGCTGCAGACAAAGGAGGAAGTGCAGA...GCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS-3UTR CAA 90 bp | CTTGGCAAGATTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGCATCTTCTTCCGGCTTaGGTGGCCCTTGCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LGKILPWLEGRTWRCCGKHLLPA*VALAFT Trigger: GGTGAAGGCAAGGGCCACCAAAGCCGGAAGAAGATG...CTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTTGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS CCA 90 bp | TGGTCTCCCAGGTCTTCTGAGTCACACGCAGTATACACACATTCATaGAGGCACTGGAACTGTCAGACACTGGTTCTGGAGCACTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WSPRSSESHAVYTHS*RHWNCQTLVLEHWA Trigger: AGCCCAGTGCTCCAGAACCAGTGTCTGACAGTTCCAGTGCCTCCATGAATGTGTGTATACTGCGTGTGACTCAGAAGACCTGGGAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229331.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTGTGGGAAGGGAGGCCCAGGCTCCAGGATGTCCTaGATTGACAGGTTGACACAT | + |
|
Preference number: 5 (lower is better) Translates to: ILPWLEGRTWRCCGKGGPGSRMS*IDRLTH Trigger: ATGTGTCAACCTGTCAATCAAGGACATCCTGGAGCC...TGGGCCTCCCTTCCCACAACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS-3UTR CAA 90 bp | AGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGGTAGGACATGGAGATGTTAGGCATAGAGCGCACTaGTGGGGATCAGAGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLGLARFYLGWRVGHGDVRHRAH*WGSETL Trigger: CAACGTCTCTGATCCCCACAAGTGCGCTCTATGCCT...AACATCTCCATGTCCTACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS TCA 90 bp | GTCAGACACTGCAGCCCCACCAGAAATTTTCCCTTCTCCCATGCCTaGCAACATCACTCTGCCCTGAATGTTCCCATCGACGACATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VRHCSPTRNFPFSHA*QHHSALNVPIDDIR Trigger: TCTGATGTCGTCGATGGGAACATTCAGGGCAGAGTGATGTTGTCAGGCATGGGAGAAGGGAAAATTTCTGGTGGGGCTGCAGTGTCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS GCA 90 bp | AAGGATATCCCATTTAGAGCCAATAAGCAGTTGGGCCACTCGGAATaGCAGGATGCTGCCTGCAGGAATGGTCACCATCTTCTTCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KDIPFRANKQLGHSE*QDAACRNGHHLLPA Trigger: AGCCGGAAGAAGATGGTGACCATTCCTGCAGGCAGCATCCTGGCATTCCGAGTGGCCCAACTGCTTATTGGCTCTAAATGGGATATCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CCA 90 bp | TCATCTGAGACGAGAAGGATATCCCATTTAGAGCCAATAAGCAGTTaGGCCACTCGGAATGCCAGGATGCTGCCTGCAGGAATGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSETRRISHLEPISS*ATRNARMLPAGMVT Trigger: GGTGACCATTCCTGCAGGCAGCATCCTGGCATTCCGAGTGGCCCAACTGCTTATTGGCTCTAAATGGGATATCCTTCTCGTCTCAGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CCA 90 bp | CTCTCCAGTTCTGAGGAGCAAGCCTTCACCTCAGCATACAGGCCCTaGAAGTCTGCCGCCTCAATTAATTCCTCCTCATCAATCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSEEQAFTSAYRP*KSAASINSSSSIPS Trigger: AGATGGGATTGATGAGGAGGAATTAATTGAGGCGGCAGACTTCCAGGGCCTGTATGCTGAGGTGAAGGCTTGCTCCTCAGAACTGGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS CCA 90 bp | AGGTCTTCTGAGTCACACGCAGTATACACACATTCATGGAGGCACTaGAACTGTCAGACACTGGTTCTGGAGCACTGGGCTCCAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: RSSESHAVYTHSWRH*NCQTLVLEHWAPGC Trigger: ACATCCTGGAGCCCAGTGCTCCAGAACCAGTGTCTGACAGTTCCAGTGCCTCCATGAATGTGTGTATACTGCGTGTGACTCAGAAGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229331.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGGGTCTGCCGCTTACCTCCTaGATCACATTCTTGACCACT | + |
|
Preference number: 5 (lower is better) Translates to: VLGFPKARLGKILPWLEGLPLTS*ITFLTT Trigger: AGTGGTCAAGAATGTGATCAAGGAGGTAAGCGGCAG...ACCCTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS CCA 90 bp | TGGTCTCCCAGGTCTTCTGAGTCACACGCAGTATACACACATTCATaGAGGCACTGGAACTGTCAGACACTGCAGCCCCACCAGAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: WSPRSSESHAVYTHS*RHWNCQTLQPHQKF Trigger: AAATTTCTGGTGGGGCTGCAGTGTCTGACAGTTCCAGTGCCTCCATGAATGTGTGTATACTGCGTGTGACTCAGAAGACCTGGGAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS CCA 90 bp | AGGTCTTCTGAGTCACACGCAGTATACACACATTCATGGAGGCACTaGAACTGTCAGACACTGCAGCCCCACCAGAAATTTTCCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSSESHAVYTHSWRH*NCQTLQPHQKFSLL Trigger: GAGAAGGGAAAATTTCTGGTGGGGCTGCAGTGTCTGACAGTTCCAGTGCCTCCATGAATGTGTGTATACTGCGTGTGACTCAGAAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS-3UTR CAA 90 bp | ATGGTTCTTGGCTTCCCAAAGGCTAGGCTTGGCAAGATTCTACCTTGGCTGGAGTCCTTGATCACATTCTaGACCACTTTCTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MVLGFPKARLGKILPWLESLITF*TTFSKA Trigger: GGCCTTTGAGAAAGTGGTCAAGAATGTGATCAAGGA...CTCCAGCCAAGGTAGAATCTTGCCAAGCCTAGCCTTTGGGAAGCCAAGAACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGTTTTCCCAACTTCTGGATCTCAGTGCATTATAACCCTGTGACTGAGTATAGCGCAGCAAGCACATaGAGGCCATGGTGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFPNFWISVHYNPVTEYSAAST*RPWCLW Trigger: CCAGAGGCACCATGGCCTCAATGTGCTTGCTGCGCT...ATACTCAGTCACAGGGTTATAATGCACTGAGATCCAGAAGTTGGGAAAACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS TCA 90 bp | CCAGAAATTTTCCCTTCTCCCATGCCTGACAACATCACTCTGCCCTaGATGTTCCCATCGACGACATCAGAGACTTTGAAGGAGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PEIFPSPMPDNITLP*MFPSTTSETLKEPK Trigger: TTTTGGCTCCTTCAAAGTCTCTGATGTCGTCGATGGGAACATTCAGGGCAGAGTGATGTTGTCAGGCATGGGAGAAGGGAAAATTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTTGTACATTTATTGAGTTTTCCCAACTTCTGGATCTCAGTGCATTATTGGGGATCAGAGACGTaGGTTCCCAGTGCACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFVHLLSFPNFWISVHYWGSET*VPSAPG Trigger: CCCAGGTGCACTGGGAACCAACGTCTCTGATCCCCA...ATAATGCACTGAGATCCAGAAGTTGGGAAAACTCAATAAATGTACAAAGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCCCAACTTCTGGATCTCAGTGCATTATAACCCTGTGACTGAGTATGGTGGGGTTTCCAGAACCTaGAGCTTGAAAATTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SFPNFWISVHYNPVTEYGGVSRT*SLKISC Trigger: ACAGGAAATTTTCAAGCTCAAGGTTCTGGAAACCCC...ACCATACTCAGTCACAGGGTTATAATGCACTGAGATCCAGAAGTTGGGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CCA 72 bp | AGGATGCAGCCAGCTGGGCCGTCCAGAGGCTCCACCTaGCCGCCACTGCACAGGCCCTGCCCTAGTGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RMQPAGPSRGST*PPLHRPCPSEA Trigger: GGCCTCACTAGGGCAGGGCCTGTGCAGTGGCGGCCAGGTGGAGCCTCTGGACGGCCCAGCTGGCTGCATCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS GCA 72 bp | TCCCCAAGGAGCACGGTGGGCAGGGACACAGAACTCTaGTCCTGCCACGGGGTGCTCTGTTCCAAGACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPRSTVGRDTEL*SCHGVLCSKTC Trigger: GCACGTCTTGGAACAGAGCACCCCGTGGCAGGAGCAGAGTTCTGTGTCCCTGCCCACCGTGCTCCTTGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CCA 72 bp | AGAGTCAAGCACCAGACACTCAAGGATGCAGCCAGCTaGGCCGTCCAGAGGCTCCACCTGGCCGCCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVKHQTLKDAAS*AVQRLHLAATA Trigger: TGCAGTGGCGGCCAGGTGGAGCCTCTGGACGGCCCAGCTGGCTGCATCCTTGAGTGTCTGGTGCTTGACTCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 72 bp | CCAGTTCTCCAGAGTCAAGCACCAGACACTCAAGGATaGAGCCAGCTGGGCCGTCCAGAGGCTCCACCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PVLQSQAPDTQG*SQLGRPEAPPG Trigger: GCCAGGTGGAGCCTCTGGACGGCCCAGCTGGCTGCATCCTTGAGTGTCTGGTGCTTGACTCTGGAGAACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CCA 72 bp | GGGCCACTCGGAATGCCAGGATGCTGCCTGCAGGAATaGTCACCATCTTCTTCCGGCTTTGGTGGCCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPLGMPGCCLQE*SPSSSGFGGPC Trigger: GCAAGGGCCACCAAAGCCGGAAGAAGATGGTGACCATTCCTGCAGGCAGCATCCTGGCATTCCGAGTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
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| CDS GCA 72 bp | GACAGCACCGTTGTCTCCAGAGCCTTAGCTAGCAGCTaGTGCTGGGTTTCACTCAGCACAGCCAGTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DSTVVSRALASS*CWVSLSTASAP Trigger: GGGAGCACTGGCTGTGCTGAGTGAAACCCAGCAGCAGCTGCTAGCTAAGGCTCTGGAGACAACGGTGCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 72 bp | TGGGCAGGGACACAGAACTCTGCTCCTGCCACGGGGTaGTCTGTTCCAAGACGTGCTTCACCAACTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WAGTQNSAPATG*SVPRRASPTPA Trigger: AGCTGGAGTTGGTGAAGCACGTCTTGGAACAGAGCACCCCGTGGCAGGAGCAGAGTTCTGTGTCCCTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 72 bp | CTCTGCTCCTGCCACGGGGTGCTCTGTTCCAAGACGTaGTTCACCAACTCCAGCTGCTTTGACAGCACCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LCSCHGVLCSKT*FTNSSCFDSTV Trigger: AACGGTGCTGTCAAAGCAGCTGGAGTTGGTGAAGCACGTCTTGGAACAGAGCACCCCGTGGCAGGAGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CCA 72 bp | CAAAGCGCAGCAAGCACATTGAGGCCATGGTGCCTCTaGCCCACTGCTTTTCTGTCACCTGAGGAGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QSAASTLRPWCL*PTAFLSPEEGS Trigger: TGAGCCCTCCTCAGGTGACAGAAAAGCAGTGGGCCAGAGGCACCATGGCCTCAATGTGCTTGCTGCGCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
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| CDS CCA 72 bp | CTTGTGGGGATCAGAGACGTTGGTTCCCAGTGCACCTaGGGGGATTCTACCTGCAGCCTTAGGCCACATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVGIRDVGSQCT*GDSTCSLRPHS Trigger: AGAATGTGGCCTAAGGCTGCAGGTAGAATCCCCCCAGGTGCACTGGGAACCAACGTCTCTGATCCCCACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CAA 90 bp | AGGAGACTGAGCTGCTTTCCGATGGAACAAAGCGCAGCAAGCACATaGAGGCCATGGTGCCTCTGGCCCACTGCTTTTCTGTCACCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRLSCFPMEQSAAST*RPWCLWPTAFLSPE Trigger: CTCAGGTGACAGAAAAGCAGTGGGCCAGAGGCACCATGGCCTCAATGTGCTTGCTGCGCTTTGTTCCATCGGAAAGCAGCTCAGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS GCA 72 bp | GAATGGTCACCATCTTCTTCCGGCTTTGGTGGCCCTTaGCTTCACCCTTCAAGCATAAAGCTCCAGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: EWSPSSSGFGGP*LHPSSIKLQAA Trigger: CGCTGCCTGGAGCTTTATGCTTGAAGGGTGAAGGCAAGGGCCACCAAAGCCGGAAGAAGATGGTGACCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
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| CDS CCA 72 bp | GGCCCTGCCCTAGTGAGGCCTCTAAGGCTTCCATGCTaGGCTGGTCCTGTAAAATCTTTCCGATGTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GPALVRPLRLPC*AGPVKSFRCSP Trigger: TGGTGAACATCGGAAAGATTTTACAGGACCAGCCCAGCATGGAAGCCTTAGAGGCCTCACTAGGGCAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CAA 72 bp | GGAATGGTCACCATCTTCTTCCGGCTTTGGTGGCCCTaGCCTTCACCCTTCAAGCATAAAGCTCCAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GMVTIFFRLWWP*PSPFKHKAPGS Trigger: GCTGCCTGGAGCTTTATGCTTGAAGGGTGAAGGCAAGGGCCACCAAAGCCGGAAGAAGATGGTGACCATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS TCA 72 bp | AGCTTGAAAATTTCCTGTTCAGAAGGCAGTAGGGCCTaGAGCTGGTGGAGTTCCGCAGGCTGTCCACCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLKISCSEGSRA*SWWSSAGCPPE Trigger: TTCCGGTGGACAGCCTGCGGAACTCCACCAGCTTCAGGCCCTACTGCCTTCTGAACAGGAAATTTTCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 ENSMUST00000230514.2 |
||
| CDS TCA 72 bp | CTCCGAAGCTGTTGCAGGATTTTGTTCTCAGGCTGCTaGAGGTGCCTTTCATGCTGCATGGTCTCCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRSCCRILFSGC*RCLSCCMVSQV Trigger: GACCTGGGAGACCATGCAGCATGAAAGGCACCTTCAGCAGCCTGAGAACAAAATCCTGCAACAGCTTCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
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| CDS GCA 72 bp | ACAGGCCCTGCCCTAGTGAGGCCTCTAAGGCTTCCATaGTGGGCTGGTCCTGTAAAATCTTTCCGATGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TGPALVRPLRLP*WAGPVKSFRCS Trigger: TGAACATCGGAAAGATTTTACAGGACCAGCCCAGCATGGAAGCCTTAGAGGCCTCACTAGGGCAGGGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS CCA 72 bp | CTGCCTGCAGGAATGGTCACCATCTTCTTCCGGCTTTaGTGGCCCTTGCCTTCACCCTTCAAGCATAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LPAGMVTIFFRL*WPLPSPFKHKA Trigger: AGCTTTATGCTTGAAGGGTGAAGGCAAGGGCCACCAAAGCCGGAAGAAGATGGTGACCATTCCTGCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CAA 72 bp | GACGAGAAGGATATCCCATTTAGAGCCAATAAGCAGTaGGGCCACTCGGAATGCCAGGATGCTGCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DEKDIPFRANKQ*GHSECQDAACR Trigger: CCTGCAGGCAGCATCCTGGCATTCCGAGTGGCCCAACTGCTTATTGGCTCTAAATGGGATATCCTTCTCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CAA 72 bp | GACTTGACAATAGGAACAGGGAGGCATAGAGCGCACTaGTGGGGATCAGAGACGTTGGTTCCCAGTGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: DLTIGTGRHRAH*WGSETLVPSAP Trigger: AGGTGCACTGGGAACCAACGTCTCTGATCCCCACAAGTGCGCTCTATGCCTCCCTGTTCCTATTGTCAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS GCA 72 bp | ACACACATTCATGGAGGCACTGGAACTGTCAGACACTaGAGCCCCACCAGAAATTTTCCCTTCTCCCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: THIHGGTGTVRH*SPTRNFPFSHA Trigger: GGCATGGGAGAAGGGAAAATTTCTGGTGGGGCTGCAGTGTCTGACAGTTCCAGTGCCTCCATGAATGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS CCA 72 bp | TGTTCTCAGGCTGCTGAAGGTGCCTTTCATGCTGCATaGTCTCCCAGGTCTTCTGAGTCACACGCAGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: CSQAAEGAFHAA*SPRSSESHAVY Trigger: GTATACTGCGTGTGACTCAGAAGACCTGGGAGACCATGCAGCATGAAAGGCACCTTCAGCAGCCTGAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CCA 72 bp | ACGAGAAGGATATCCCATTTAGAGCCAATAAGCAGTTaGGCCACTCGGAATGCCAGGATGCTGCCTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TRRISHLEPISS*ATRNARMLPAG Trigger: TCCTGCAGGCAGCATCCTGGCATTCCGAGTGGCCCAACTGCTTATTGGCTCTAAATGGGATATCCTTCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
||
| CDS CCA 72 bp | TCTGAGGAGCAAGCCTTCACCTCAGCATACAGGCCCTaGAAGTCTGCCGCCTCAATTAATTCCTCCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SEEQAFTSAYRP*KSAASINSSSS Trigger: TGATGAGGAGGAATTAATTGAGGCGGCAGACTTCCAGGGCCTGTATGCTGAGGTGAAGGCTTGCTCCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
||
| CDS TCA 72 bp | TGCCCTGAATGTTCCCATCGACGACATCAGAGACTTTaGAGGAGCCAAAACACTCCGGTTCTGGTTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: CPECSHRRHQRL*RSQNTPVLVLE Trigger: CTCCAGAACCAGAACCGGAGTGTTTTGGCTCCTTCAAAGTCTCTGATGTCGTCGATGGGAACATTCAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS GCA 72 bp | ACACTGCAGCCCCACCAGAAATTTTCCCTTCTCCCATaGCTGACAACATCACTCTGCCCTGAATGTTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: TLQPHQKFSLLP*LTTSLCPECSH Trigger: ATGGGAACATTCAGGGCAGAGTGATGTTGTCAGGCATGGGAGAAGGGAAAATTTCTGGTGGGGCTGCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CCA 72 bp | TGCCCTAGTGAGGCCTCTAAGGCTTCCATGCTGGGCTaGTCCTGTAAAATCTTTCCGATGTTCACCAGTATC | + |
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Preference number: 6 (lower is better) Translates to: CPSEASKASMLG*SCKIFPMFTSI Trigger: GATACTGGTGAACATCGGAAAGATTTTACAGGACCAGCCCAGCATGGAAGCCTTAGAGGCCTCACTAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS CAA 72 bp | ACCGGAATGAGATCGCCTCTGCTGCCGCTTACCTCCTaGATCACATTCTTGACCACTTTCTCAAAGGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: TGMRSPLLPLTS*ITFLTTFSKAD Trigger: ATCGGCCTTTGAGAAAGTGGTCAAGAATGTGATCAAGGAGGTAAGCGGCAGCAGAGGCGATCTCATTCCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 ENSMUST00000230514.2 |
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| CDS CCA 72 bp | GAGTCACACGCAGTATACACACATTCATGGAGGCACTaGAACTGTCAGACACTGCAGCCCCACCAGAAATTT | + |
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Preference number: 6 (lower is better) Translates to: ESHAVYTHSWRH*NCQTLQPHQKF Trigger: AAATTTCTGGTGGGGCTGCAGTGTCTGACAGTTCCAGTGCCTCCATGAATGTGTGTATACTGCGTGTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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| CDS TCA 72 bp | TTAATTCCTCCTCATCAATCCCATCTGACAGGAGACTaGGCTGCTTTCCGATGGAACAAAGCGCAGCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LIPPHQSHLTGD*AAFRWNKAQQA Trigger: TGCTTGCTGCGCTTTGTTCCATCGGAAAGCAGCTCAGTCTCCTGTCAGATGGGATTGATGAGGAGGAATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023238.6 ENSMUST00000229331.2 |
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| CDS GCA 72 bp | AAATTTTCCCTTCTCCCATGCCTGACAACATCACTCTaGCCTGAATGTTCCCATCGACGACATCAGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: KFSLLPCLTTSL*PECSHRRHQRL Trigger: AAGTCTCTGATGTCGTCGATGGGAACATTCAGGGCAGAGTGATGTTGTCAGGCATGGGAGAAGGGAAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023238.6 |
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