Pregenerated sensors for GSDMC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055748Ensembl transcript IDs: ENSMUST00000063530.7, ENSMUST00000188108.7
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAGAACCTCACCCTACCTAAAACACCTATAGGCTCTCAATGCTGCTGGCAGGAGCTACCCTTGCTCAAATaGATAATCACACACATATGC | + |
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Preference number: 2 (lower is better) Translates to: ENLTLPKTPIGSQCCWQELPLLK*IITHIC Trigger: GCATATGTGTGTGATTATTCATTTGAGCAAGGGTAG...CTCCTGCCAGCAGCATTGAGAGCCTATAGGTGTTTTAGGTAGGGTGAGGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR-3UTR TCA 90 bp | ACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACATGAATGGAGGCTACCCTTGCTCAAATaGATAATCACACACATATGC | + |
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Preference number: 2 (lower is better) Translates to: THTRPSKPEPTNIPHEWRLPLLK*IITHIC Trigger: GCATATGTGTGTGATTATTCATTTGAGCAAGGGTAG...CCTCCATTCATGTGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR-3UTR GCA 90 bp | GCATACCATTTGAGGAGTTTTGATAGATCCTGTTTCCTAGACATGCTAAGGATAATAGGCTCTCAATGCTaGTGGCAGGAGGTAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AYHLRSFDRSCFLDMLRIIGSQC*WQEVAS Trigger: AGAGGCTACCTCCTGCCAGCAGCATTGAGAGCCTAT...TATCCTTAGCATGTCTAGGAAACAGGATCTATCAAAACTCCTCAAATGGTATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR-3UTR CCA 90 bp | ATAAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCAGGAACTTGGAAGGGATaGATTAAAAGAAACAATGGG | + |
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Preference number: 2 (lower is better) Translates to: INSKWQWVPTQDQANLSPGTWKG*IKRNNG Trigger: CCCATTGTTTCTTTTAATCCATCCCTTCCAAGTTCC...TGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR CAA 90 bp | CAAACAACCCTAATTAAACGTAGCATAGCATCAAACAGACAAATGTaGAATGAGAAGTTGTTGAGGAAAAAGGAACTTGGAAGGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: QTTLIKRSIASNRQM*NEKLLRKKELGRDG Trigger: TCCATCCCTTCCAAGTTCCTTTTTCCTCAACAACTTCTCATTCAACATTTGTCTGTTTGATGCTATGCTACGTTTAATTAGGGTTGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR GCA 72 bp | CTCACCCTACCTAAAACACCTATAGGCTCTCAATGCTaGTGGCAGGAGGTAGCCTCTGGAAGGCTACCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LTLPKTPIGSQC*WQEVASGRLPL Trigger: CAAGGGTAGCCTTCCAGAGGCTACCTCCTGCCAGCAGCATTGAGAGCCTATAGGTGTTTTAGGTAGGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR CCA 72 bp | TATAGGCTCTCAATGCTGCTGGCAGGAGGTAGCCTCTaGAAGGCTACCCTTGCTCAAATGAATAATCACACA | + |
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Preference number: 3 (lower is better) Translates to: YRLSMLLAGGSL*KATLAQMNNHT Trigger: TGTGTGATTATTCATTTGAGCAAGGGTAGCCTTCCAGAGGCTACCTCCTGCCAGCAGCATTGAGAGCCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR CCA 72 bp | TATGGAATAGCTAAACCCATAAACTCAAAGTGGCAATaGGTACCCACACAAGACCAAGCAAACCTGAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: YGIAKPINSKWQ*VPTQDQANLSP Trigger: TGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTATGGGTTTAGCTATTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR-3UTR CAA 90 bp | ATAAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCATCAAACAGACAAATGTaGAATGAGAAGTTGTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: INSKWQWVPTQDQANLSPSNRQM*NEKLLR Trigger: CCTCAACAACTTCTCATTCAACATTTGTCTGTTTGA...TGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR-3UTR CAA 90 bp | TGGAAGGCTACCCTTGCTCAAATGAATAATCACACACATATGCAAACAACCCTATCAAACAGACAAATGTaGAATGAGAAGTTGTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: WKATLAQMNNHTHMQTTLSNRQM*NEKLLR Trigger: CCTCAACAACTTCTCATTCAACATTTGTCTGTTTGA...TAGGGTTGTTTGCATATGTGTGTGATTATTCATTTGAGCAAGGGTAGCCTTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | ACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACATGAATGGAGGAAATGTATCCAGGACTaGGGCTGGGCTTGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: THTRPSKPEPTNIPHEWRKCIQD*GWAWRK Trigger: CTTCCTCCAAGCCCAGCCTCAGTCCTGGATACATTT...CCTCCATTCATGTGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CCA 90 bp | GAGAACCTCACCCTACCTAAAACACCTATAGGCTCTCAATGCTGCTGGCAGGAGAGACACTTCAGGCTCTaGAACAGGAAAGTTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ENLTLPKTPIGSQCCWQERHFRL*NRKVGL Trigger: GAGCCCAACTTTCCTGTTCCAGAGCCTGAAGTGTCT...CTCCTGCCAGCAGCATTGAGAGCCTATAGGTGTTTTAGGTAGGGTGAGGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CCA 90 bp | ATAAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCAGCCAGCAGACAGAGTTaGGTATCACTCAGCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: INSKWQWVPTQDQANLSPASRQS*VSLSTN Trigger: GTTGGTGCTGAGTGATACCCAACTCTGTCTGCTGGC...TGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR GCA 90 bp | AAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCACCCTGTCACTGAGCATATaGAGGAAACTGGAGAACACA | + |
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Preference number: 4 (lower is better) Translates to: KLKVAMGTHTRPSKPEPTLSLSI*RKLENT Trigger: TGTGTTCTCCAGTTTCCTGCATATGCTCAGTGACAG...GGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR GCA 90 bp | CTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGACTCTTGTGTATGCTACCAACTCTACTTGGTaGGGGAGGAGCCCCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LYSHQPKTCTRFTTLVYATNSTW*GRSPIF Trigger: GAAGATGGGGCTCCTCCCGCACCAAGTAGAGTTGGT...AGCATACACAAGAGTCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | GTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCATGTGAAGGGAGTGTTTaGGGAATACTTGAAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAMGTHTRPSKPEPTNIPCEGSV*GILEVC Trigger: ACAAACTTCAAGTATTCCTCAAACACTCCCTTCACA...TGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR GCA 90 bp | ATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACATGAACTGTCACTGAGCATATaGAGGAAACTGGAGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: MGTHTRPSKPEPTNIPHELSLSI*RKLENT Trigger: TGTGTTCTCCAGTTTCCTGCATATGCTCAGTGACAG...TTCATGTGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | CTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGACTCTTGTGTATGCTGAATTTGGTTGCATCTaGCAGGCATTCCACAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LYSHQPKTCTRFTTLVYAEFGCI*QAFHRP Trigger: AGGCCTGTGGAATGCCTGTCAGATGCAACCAAATTC...AGCATACACAAGAGTCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | GTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCATGTTTGAGGAATACTTaGAGTTTGTCTGTAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: VAMGTHTRPSKPEPTNIPCLRNT*SLSVRC Trigger: GCATCTTACAGACAAACTTCAAGTATTCCTCAAACA...TGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR GCA 90 bp | TGGAAGGCTACCCTTGCTCAAATGAATAATCACACACATATGCAAACAACCCTAACCAACTCTACTTGGTaGGGGAGGAGCCCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKATLAQMNNHTHMQTTLTNSTW*GRSPIF Trigger: GAAGATGGGGCTCCTCCCGCACCAAGTAGAGTTGGT...TAGGGTTGTTTGCATATGTGTGTGATTATTCATTTGAGCAAGGGTAGCCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CCA 90 bp | ATAGCTAAACCCATAAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAGACACTTCAGGCTCTaGAACAGGAAAGTTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: IAKPINSKWQWVPTQDQARHFRL*NRKVGL Trigger: GAGCCCAACTTTCCTGTTCCAGAGCCTGAAGTGTCT...TGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTATGGGTTTAGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | ATAAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCATCAATGACTTCCTCCTaGTATCTTAGCGTTACAGGT | + |
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Preference number: 4 (lower is better) Translates to: INSKWQWVPTQDQANLSPSMTSS*YLSVTG Trigger: ACCTGTAACGCTAAGATATCAGGAGGAAGTCATTGA...TGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CCA 90 bp | ACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACATGAATGGAGGAAGGGTAAATCCAACTaGAATATCTTCAGTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: THTRPSKPEPTNIPHEWRKGKSN*NIFSFP Trigger: TGGGAAACTGAAGATATTCCAGTTGGATTTACCCTT...CCTCCATTCATGTGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | TGGAAGGCTACCCTTGCTCAAATGAATAATCACACACATATGCAAACAACCCTAGAACATCCCTGTCACTaGGCATATGCAGGAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: WKATLAQMNNHTHMQTTLEHPCH*AYAGNW Trigger: CCAGTTTCCTGCATATGCTCAGTGACAGGGATGTTC...TAGGGTTGTTTGCATATGTGTGTGATTATTCATTTGAGCAAGGGTAGCCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | GCATACCATTTGAGGAGTTTTGATAGATCCTGTTTCCTAGACATGCTAAGGATAAAATGTATCCAGGACTaGGGCTGGGCTTGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: AYHLRSFDRSCFLDMLRIKCIQD*GWAWRK Trigger: CTTCCTCCAAGCCCAGCCTCAGTCCTGGATACATTT...TATCCTTAGCATGTCTAGGAAACAGGATCTATCAAAACTCCTCAAATGGTATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | GCATACCATTTGAGGAGTTTTGATAGATCCTGTTTCCTAGACATGCTAAGGATAGAATTTGGTTGCATCTaGCAGGCATTCCACAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: AYHLRSFDRSCFLDMLRIEFGCI*QAFHRP Trigger: AGGCCTGTGGAATGCCTGTCAGATGCAACCAAATTC...TATCCTTAGCATGTCTAGGAAACAGGATCTATCAAAACTCCTCAAATGGTATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | AGGATCCATAGCATCTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGATCAATGACTTCCTCCTaGTATCTTAGCGTTACAGGT | + |
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Preference number: 4 (lower is better) Translates to: RIHSIFIPTSLKHALDSRSMTSS*YLSVTG Trigger: ACCTGTAACGCTAAGATATCAGGAGGAAGTCATTGA...TCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAGATGCTATGGATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | AGGATCCATAGCATCTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGATGTTTGAGGAATACTTaGAGTTTGTCTGTAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: RIHSIFIPTSLKHALDSRCLRNT*SLSVRC Trigger: GCATCTTACAGACAAACTTCAAGTATTCCTCAAACA...TCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAGATGCTATGGATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR TCA 90 bp | TGGAAGGCTACCCTTGCTCAAATGAATAATCACACACATATGCAAACAACCCTATGTGAAGGGAGTGTTTaGGGAATACTTGAAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: WKATLAQMNNHTHMQTTLCEGSV*GILEVC Trigger: ACAAACTTCAAGTATTCCTCAAACACTCCCTTCACA...TAGGGTTGTTTGCATATGTGTGTGATTATTCATTTGAGCAAGGGTAGCCTTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR GCA 90 bp | AGGATCCATAGCATCTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGAAGTTTGTCTGTAAGATaGTCTTTACCAACTCTACTT | + |
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Preference number: 4 (lower is better) Translates to: RIHSIFIPTSLKHALDSRSLSVR*SLPTLL Trigger: AAGTAGAGTTGGTAAAGAGCATCTTACAGACAAACT...TCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAGATGCTATGGATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CCA 90 bp | GCATACCATTTGAGGAGTTTTGATAGATCCTGTTTCCTAGACATGCTAAGGATAAAGGGTAAATCCAACTaGAATATCTTCAGTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: AYHLRSFDRSCFLDMLRIKGKSN*NIFSFP Trigger: TGGGAAACTGAAGATATTCCAGTTGGATTTACCCTT...TATCCTTAGCATGTCTAGGAAACAGGATCTATCAAAACTCCTCAAATGGTATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| 3UTR CAA 72 bp | CTAATTAAACGTAGCATAGCATCAAACAGACAAATGTaGAATGAGAAGTTGTTGAGGAAAAAGGAACTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LIKRSIASNRQM*NEKLLRKKELG Trigger: TCCAAGTTCCTTTTTCCTCAACAACTTCTCATTCAACATTTGTCTGTTTGATGCTATGCTACGTTTAATTAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | ACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACATGAATGGAGGGCAGACAGGGGCATCTaGGCTTCCAAATCCCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: THTRPSKPEPTNIPHEWRADRGI*ASKSQV Trigger: AACTTGGGATTTGGAAGCCAAGATGCCCCTGTCTGC...CCTCCATTCATGTGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS CCA 90 bp | CTTGCAATGTCTGCGACATTCAAGTTAGCCTCCAGGTCTGTTGATTaGACATGTATGAAGGGCTTGGGAGCAGACACTTCAGGCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LAMSATFKLASRSVD*TCMKGLGADTSGSG Trigger: TCCAGAGCCTGAAGTGTCTGCTCCCAAGCCCTTCATACATGTCCAATCAACAGACCTGGAGGCTAACTTGAATGTCGCAGACATTGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | GTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACAGCACCAACAGAGCTaGAAGGAGATAAAGATTGAG | + |
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Preference number: 5 (lower is better) Translates to: VAMGTHTRPSKPEPTNIPQHQQS*KEIKIE Trigger: CTCAATCTTTATCTCCTTCAAGCTCTGTTGGTGCTG...TGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | AGGATCCATAGCATCTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGAGGACTGAGGCTGGGCTaGGAGGAAGAGTTAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: RIHSIFIPTSLKHALDSRGLRLG*EEELAF Trigger: GAAGGCTAACTCTTCCTCCAAGCCCAGCCTCAGTCC...TCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAGATGCTATGGATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | AAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCACCCTTCTTGAACATCCTTaGAGAGCTCAGCCAGTAGTT | + |
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Preference number: 5 (lower is better) Translates to: KLKVAMGTHTRPSKPEPTLLEHP*RAQPVV Trigger: AACTACTGGCTGAGCTCTCAAAGGATGTTCAAGAAG...GGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | GAGAACCTCACCCTACCTAAAACACCTATAGGCTCTCAATGCTGCTGGCAGGAGCCTCAGATCTCTTCCTaGAAGCTTTTTAACCACATC | + |
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Preference number: 5 (lower is better) Translates to: ENLTLPKTPIGSQCCWQEPQISS*KLFNHI Trigger: GATGTGGTTAAAAAGCTTCAAGGAAGAGATCTGAGG...CTCCTGCCAGCAGCATTGAGAGCCTATAGGTGTTTTAGGTAGGGTGAGGTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | ACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACATGAATGGAGGCCTCAGATCTCTTCCTaGAAGCTTTTTAACCACATC | + |
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Preference number: 5 (lower is better) Translates to: THTRPSKPEPTNIPHEWRPQISS*KLFNHI Trigger: GATGTGGTTAAAAAGCTTCAAGGAAGAGATCTGAGG...CCTCCATTCATGTGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | CATAGCATCTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGACTCTTGGCAGACAGGGGCATCTaGGCTTCCAAATCCCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: HSIFIPTSLKHALDSRLLADRGI*ASKSQV Trigger: AACTTGGGATTTGGAAGCCAAGATGCCCCTGTCTGC...CAAGAGTCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAGATGCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | TGGAAGGCTACCCTTGCTCAAATGAATAATCACACACATATGCAAACAACCCTAGGACTGAGGCTGGGCTaGGAGGAAGAGTTAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: WKATLAQMNNHTHMQTTLGLRLG*EEELAF Trigger: GAAGGCTAACTCTTCCTCCAAGCCCAGCCTCAGTCC...TAGGGTTGTTTGCATATGTGTGTGATTATTCATTTGAGCAAGGGTAGCCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | ACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACATGAATGGAGGGAAGAATTTCCAGTTTaGGATTTGGGATGCTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: THTRPSKPEPTNIPHEWREEFPV*DLGCLY Trigger: GTACAAGCATCCCAAATCCAAAACTGGAAATTCTTC...CCTCCATTCATGTGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | GTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACACATAAAATTTAGATaGGCAGGCTCCTCAATTGTT | + |
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Preference number: 5 (lower is better) Translates to: VAMGTHTRPSKPEPTNIPHIKFR*AGSSIV Trigger: AACAATTGAGGAGCCTGCCAATCTAAATTTTATGTG...TGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | CATAGCATCTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGACTCTTGATAGGCGGAATTTGGTaGCATCTGACAGGCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: HSIFIPTSLKHALDSRLLIGGIW*HLTGIP Trigger: TGGAATGCCTGTCAGATGCAACCAAATTCCGCCTAT...CAAGAGTCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAGATGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | AGGATCCATAGCATCTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGAATAGGCGGAATTTGGTaGCATCTGACAGGCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: RIHSIFIPTSLKHALDSRIGGIW*HLTGIP Trigger: TGGAATGCCTGTCAGATGCAACCAAATTCCGCCTAT...TCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAGATGCTATGGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | ATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCACCAACATTCCACATGAAGAAGAATTTCCAGTTTaGGATTTGGGATGCTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: MGTHTRPSKPEPTNIPHEEEFPV*DLGCLY Trigger: GTACAAGCATCCCAAATCCAAAACTGGAAATTCTTC...TTCATGTGGAATGTTGGTGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | GAGAACCTCACCCTACCTAAAACACCTATAGGCTCTCAATGCTGCTGGCAGGAGGTGTTTGAGGAATACTaGAAGTTTGTCTGTAAGATG | + |
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Preference number: 5 (lower is better) Translates to: ENLTLPKTPIGSQCCWQEVFEEY*KFVCKM Trigger: CATCTTACAGACAAACTTCAAGTATTCCTCAAACAC...CTCCTGCCAGCAGCATTGAGAGCCTATAGGTGTTTTAGGTAGGGTGAGGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS TCA 90 bp | TCCCTGTCACTGAGCATATGCAGGAAACTGGAGAACACAACTTCTTaGACATCCTTTGAGAGCTCAGCCAGTAGTTGTGTTTGTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SLSLSICRKLENTTS*TSFESSASSCVCSD Trigger: ATCTGAACAAACACAACTACTGGCTGAGCTCTCAAAGGATGTTCAAGAAGTTGTGTTCTCCAGTTTCCTGCATATGCTCAGTGACAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | ATAAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCAATTCTCAATGACAAGTaGCTGCTTCTTATAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: INSKWQWVPTQDQANLSPILNDK*LLLIGQ Trigger: TTGGCCTATAAGAAGCAGCAACTTGTCATTGAGAAT...TGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | CATAGCATCTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGACTCTTGCTTCTTGAACATCCTTaGAGAGCTCAGCCAGTAGTT | + |
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Preference number: 5 (lower is better) Translates to: HSIFIPTSLKHALDSRLLLLEHP*RAQPVV Trigger: AACTACTGGCTGAGCTCTCAAAGGATGTTCAAGAAG...CAAGAGTCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAGATGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | CATAGCATCTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGACTCTTGCAGCACCAACAGAGCTaGAAGGAGATAAAGATTGAG | + |
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Preference number: 5 (lower is better) Translates to: HSIFIPTSLKHALDSRLLQHQQS*KEIKIE Trigger: CTCAATCTTTATCTCCTTCAAGCTCTGTTGGTGCTG...CAAGAGTCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAGATGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS TCA 90 bp | TCAACTCCAGCATTTTCATCAGGTCATACAGAACATCCCTGTCACTaGGCATATGCAGGAAACTGGAGAACACAACTTCTTGAACATCCT | + |
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Preference number: 5 (lower is better) Translates to: STPAFSSGHTEHPCH*AYAGNWRTQLLEHP Trigger: AGGATGTTCAAGAAGTTGTGTTCTCCAGTTTCCTGCATATGCTCAGTGACAGGGATGTTCTGTATGACCTGATGAAAATGCTGGAGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | ATAAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCACAACAGTTTCCTGTTTaGAAGAATTTCCAGTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: INSKWQWVPTQDQANLSPQQFPV*KNFQFW Trigger: CCAAAACTGGAAATTCTTCAAAACAGGAAACTGTTG...TGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | ATAAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAAACCTGAGCCCAGTGTTTGAGGAATACTaGAAGTTTGTCTGTAAGATG | + |
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Preference number: 5 (lower is better) Translates to: INSKWQWVPTQDQANLSPVFEEY*KFVCKM Trigger: CATCTTACAGACAAACTTCAAGTATTCCTCAAACAC...TGGGCTCAGGTTTGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS GCA 90 bp | CCAACAGTTTCCTGTTTTGAAGAATTTCCAGTTTTGGATTTGGGATaGTTGTACTCTGAACCTCGATGTTGTATCCACCGTACCCAACAT | + |
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Preference number: 5 (lower is better) Translates to: PTVSCFEEFPVLDLG*LYSEPRCCIHRTQH Trigger: ATGTTGGGTACGGTGGATACAACATCGAGGTTCAGAGTACAAGCATCCCAAATCCAAAACTGGAAATTCTTCAAAACAGGAAACTGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | CTTTATTCCCACCAGCCTAAAACATGCACTCGATTCACGACTCTTGTGTATGCTTTTCCAGTTTTGGATTaGGGATGCTTGTACTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: LYSHQPKTCTRFTTLVYAFPVLD*GCLYSE Trigger: TTCAGAGTACAAGCATCCCAAATCCAAAACTGGAAA...AGCATACACAAGAGTCGTGAATCGAGTGCATGTTTTAGGCTGGTGGGAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | ATAGCTAAACCCATAAACTCAAAGTGGCAATGGGTACCCACACAAGACCAAGCAATTCTCAATGACAAGTaGCTGCTTCTTATAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: IAKPINSKWQWVPTQDQAILNDK*LLLIGQ Trigger: TTGGCCTATAAGAAGCAGCAACTTGTCATTGAGAAT...TGCTTGGTCTTGTGTGGGTACCCATTGCCACTTTGAGTTTATGGGTTTAGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS-3UTR CAA 90 bp | TGGAAGGCTACCCTTGCTCAAATGAATAATCACACACATATGCAAACAACCCTACACATAAAATTTAGATaGGCAGGCTCCTCAATTGTT | + |
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Preference number: 5 (lower is better) Translates to: WKATLAQMNNHTHMQTTLHIKFR*AGSSIV Trigger: AACAATTGAGGAGCCTGCCAATCTAAATTTTATGTG...TAGGGTTGTTTGCATATGTGTGTGATTATTCATTTGAGCAAGGGTAGCCTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS CAA 90 bp | TTCAAGTTAGCCTCCAGGTCTGTTGATTGGACATGTATGAAGGGCTaGGGAGCAGACACTTCAGGCTCTGGAACAGGAAAGTTGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FKLASRSVDWTCMKG*GADTSGSGTGKLGS Trigger: GGAGCCCAACTTTCCTGTTCCAGAGCCTGAAGTGTCTGCTCCCAAGCCCTTCATACATGTCCAATCAACAGACCTGGAGGCTAACTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS TCA 72 bp | TCTGACAGGCATTCCACAGGCCTCAGATCTCTTCCTTaGAGCTTTTTAACCACATCCTTGCTAGCCCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SDRHSTGLRSLP*SFLTTSLLARS Trigger: TGACCGGGCTAGCAAGGATGTGGTTAAAAAGCTTCAAGGAAGAGATCTGAGGCCTGTGGAATGCCTGTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS TCA 72 bp | GTTTCCCAACCTGATCGAGGAGTCTCCTGGAGTATGTaGAATAGGCGGAATTTGGTTGCATCTGACAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: VSQPDRGVSWSM*NRRNLVASDRH Trigger: ATGCCTGTCAGATGCAACCAAATTCCGCCTATTTCACATACTCCAGGAGACTCCTCGATCAGGTTGGGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS TCA 72 bp | AATGTCTGCGACATTCAAGTTAGCCTCCAGGTCTGTTaGTTGGACATGTATGAAGGGCTTGGGAGCAGACAC | + |
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Preference number: 6 (lower is better) Translates to: NVCDIQVSLQVC*LDMYEGLGSRH Trigger: GTGTCTGCTCCCAAGCCCTTCATACATGTCCAATCAACAGACCTGGAGGCTAACTTGAATGTCGCAGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS CCA 72 bp | ATGACAGGCTTCCATAGAGAGCAGACAGGGGCATCTTaGCTTCCAAATCCCAAGTTGACCTGGGATTATTCA | + |
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Preference number: 6 (lower is better) Translates to: MTGFHREQTGAS*LPNPKLTWDYS Trigger: TGAATAATCCCAGGTCAACTTGGGATTTGGAAGCCAAGATGCCCCTGTCTGCTCTCTATGGAAGCCTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS TCA 72 bp | CTGAGCATATGCAGGAAACTGGAGAACACAACTTCTTaGACATCCTTTGAGAGCTCAGCCAGTAGTTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LSICRKLENTTS*TSFESSASSCV Trigger: AACACAACTACTGGCTGAGCTCTCAAAGGATGTTCAAGAAGTTGTGTTCTCCAGTTTCCTGCATATGCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS CAA 72 bp | GACCTTCCCGCCTTGCCTCGAACCTTGAAAAGCTGTTaGAAGAACCCTTTAACTAAAAGATTGACACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: DLPALPRTLKSC*KNPLTKRLTLL Trigger: AAGCAGTGTCAATCTTTTAGTTAAAGGGTTCTTCAAACAGCTTTTCAAGGTTCGAGGCAAGGCGGGAAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS CAA 72 bp | AGGGAGAATGACACAAGTGTTATTCTCAATGACAAGTaGCTGCTTCTTATAGGCCAACACCGAACCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: RENDTSVILNDK*LLLIGQHRTLW Trigger: CCAAAGGGTTCGGTGTTGGCCTATAAGAAGCAGCAACTTGTCATTGAGAATAACACTTGTGTCATTCTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS GCA 72 bp | TCCTGTTTTGAAGAATTTCCAGTTTTGGATTTGGGATaGTTGTACTCTGAACCTCGATGTTGTATCCACCGT | + |
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Preference number: 6 (lower is better) Translates to: SCFEEFPVLDLG*LYSEPRCCIHR Trigger: ACGGTGGATACAACATCGAGGTTCAGAGTACAAGCATCCCAAATCCAAAACTGGAAATTCTTCAAAACAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS CAA 72 bp | TGTTTTGAAGAATTTCCAGTTTTGGATTTGGGATGCTaGTACTCTGAACCTCGATGTTGTATCCACCGTACC | + |
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Preference number: 6 (lower is better) Translates to: CFEEFPVLDLGC*YSEPRCCIHRT Trigger: GGTACGGTGGATACAACATCGAGGTTCAGAGTACAAGCATCCCAAATCCAAAACTGGAAATTCTTCAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS CAA 72 bp | ACAGTTTCCTGTTTTGAAGAATTTCCAGTTTTGGATTaGGGATGCTTGTACTCTGAACCTCGATGTTGTATC | + |
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Preference number: 6 (lower is better) Translates to: TVSCFEEFPVLD*GCLYSEPRCCI Trigger: GATACAACATCGAGGTTCAGAGTACAAGCATCCCAAATCCAAAACTGGAAATTCTTCAAAACAGGAAACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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| CDS CAA 72 bp | TCAGATACTTCATGTTGTAGACACATAAAATTTAGATaGGCAGGCTCCTCAATTGTTCCAATTGGATCGATG | + |
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Preference number: 6 (lower is better) Translates to: SDTSCCRHIKFR*AGSSIVPIGSM Trigger: CATCGATCCAATTGGAACAATTGAGGAGCCTGCCAATCTAAATTTTATGTGTCTACAACATGAAGTATCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063530.7 ENSMUST00000188108.7 |
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