Pregenerated sensors for GSDMC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055827Ensembl transcript IDs: ENSMUST00000089894.6, ENSMUST00000185526.7, ENSMUST00000190682.7
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGGAGGAGAACCTCACCCTCCCTAAAACACCTACAGACTCTCAATaGTGCTGGCAGGAGGTAGCCTCTGGAAGGCTACCCTTGCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: MEENLTLPKTPTDSQ*CWQEVASGRLPLLK Trigger: TTTGAGCAAGGGTAGCCTTCCAGAGGCTACCTCCTGCCAGCAGCATTGAGAGTCTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR CCA 90 bp | CTCACAAGACCAAGCAAACCCGAGCCCACCAACATTCCACAAGAATaGAGGAGAACCTCACCCTCCCTAAAACACCTACAGACTCTCAAT | + |
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Preference number: 1 (lower is better) Translates to: LTRPSKPEPTNIPQE*RRTSPSLKHLQTLN Trigger: ATTGAGAGTCTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTTGGTGGGCTCGGGTTTGCTTGGTCTTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR-3UTR CCA 90 bp | ACCCGAGCCCACCAACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAGGGACTTGGAAGTGGTaGATTAAAAGAAACAATGGG | + |
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Preference number: 2 (lower is better) Translates to: TRAHQHSTRMEENLTLPKGTWKW*IKRNNG Trigger: CCCATTGTTTCTTTTAATCCACCACTTCCAAGTCCC...TTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTTGGTGGGCTCGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGAGAACCTCACCCTCCCTAAAACACCTACAGACTCTCAATGCTGCTGGCAGGGGGACTTGGAAGTaGTGGATTAAAAGAAACAAT | + |
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Preference number: 2 (lower is better) Translates to: WRRTSPSLKHLQTLNAAGRGTWK*WIKRNN Trigger: ATTGTTTCTTTTAATCCACCACTTCCAAGTCCCCCT...GCCAGCAGCATTGAGAGTCTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR-3UTR TCA 90 bp | GAGCCCACCAACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAACACCAGACAAATGTTGAATaGGAAGTTGTTGAGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: EPTNIPQEWRRTSPSLKHQTNVE*EVVEEK Trigger: CTTTTCCTCAACAACTTCTCATTCAACATTTGTCTG...GTGTTTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTTGGTGGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGAATGAGAAGTTGTTGAGGAAAAGGGGGACTTGGAAGTGGTGGATTAAACATCTTTATTCCCACTaGCCTAAAACATGCACTCAA | + |
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Preference number: 2 (lower is better) Translates to: MLNEKLLRKRGTWKWWIKHLYSH*PKTCTQ Trigger: TTGAGTGCATGTTTTAGGCCAGTGGGAATAAAGATG...TTTAATCCACCACTTCCAAGTCCCCCTTTTCCTCAACAACTTCTCATTCAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR GCA 72 bp | CTCACCCTCCCTAAAACACCTACAGACTCTCAATGCTaGTGGCAGGAGGTAGCCTCTGGAAGGCTACCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LTLPKTPTDSQC*WQEVASGRLPL Trigger: CAAGGGTAGCCTTCCAGAGGCTACCTCCTGCCAGCAGCATTGAGAGTCTGTAGGTGTTTTAGGGAGGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR GCA 72 bp | AACCTCACCCTCCCTAAAACACCTACAGACTCTCAATaGTGCTGGCAGGAGGTAGCCTCTGGAAGGCTACCC | + |
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Preference number: 3 (lower is better) Translates to: NLTLPKTPTDSQ*CWQEVASGRLP Trigger: GGGTAGCCTTCCAGAGGCTACCTCCTGCCAGCAGCATTGAGAGTCTGTAGGTGTTTTAGGGAGGGTGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR CCA 72 bp | ACCCTCCCTAAAACACCTACAGACTCTCAATGCTGCTaGCAGGAGGTAGCCTCTGGAAGGCTACCCTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: TLPKTPTDSQCC*QEVASGRLPLL Trigger: GAGCAAGGGTAGCCTTCCAGAGGCTACCTCCTGCCAGCAGCATTGAGAGTCTGTAGGTGTTTTAGGGAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR CCA 72 bp | CCAAGCAAACCCGAGCCCACCAACATTCCACAAGAATaGAGGAGAACCTCACCCTCCCTAAAACACCTACAG | + |
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Preference number: 3 (lower is better) Translates to: PSKPEPTNIPQE*RRTSPSLKHLQ Trigger: CTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTTGGTGGGCTCGGGTTTGCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR-3UTR CAA 90 bp | ACCCGAGCCCACCAACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAATGTTGAATGAGAAGTaGTTGAGGAAAAGGGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: TRAHQHSTRMEENLTLPKMLNEK*LRKRGT Trigger: AGTCCCCCTTTTCCTCAACAACTTCTCATTCAACAT...TTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTTGGTGGGCTCGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGAACCTCACCCTCCCTAAAACACCTACAGACTCTCAATGCTGCTGGCAGATGTTGAATGAGAAGTaGTTGAGGAAAAGGGGGACT | + |
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Preference number: 3 (lower is better) Translates to: EENLTLPKTPTDSQCCWQMLNEK*LRKRGT Trigger: AGTCCCCCTTTTCCTCAACAACTTCTCATTCAACAT...CTGCCAGCAGCATTGAGAGTCTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR CCA 72 bp | TACAGACTCTCAATGCTGCTGGCAGGAGGTAGCCTCTaGAAGGCTACCCTTGCTCAAATGAATAATCACACA | + |
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Preference number: 3 (lower is better) Translates to: YRLSMLLAGGSL*KATLAQMNNHT Trigger: TGTGTGATTATTCATTTGAGCAAGGGTAGCCTTCCAGAGGCTACCTCCTGCCAGCAGCATTGAGAGTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| 3UTR-3UTR CAA 90 bp | AACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAACACCTACAGACTTTGAATGAGAAGTTGTaGAGGAAAAGGGGGACTTGG | + |
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Preference number: 3 (lower is better) Translates to: NIPQEWRRTSPSLKHLQTLNEKL*RKRGTW Trigger: CCAAGTCCCCCTTTTCCTCAACAACTTCTCATTCAA...AGTCTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR TCA 90 bp | CCTAAAACACCTACAGACTCTCAATGCTGCTGGCAGGAGGTAGCCTCTGGAAGGAGTGGGGCAAGAAGCTaGGGCTGGACTGTGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PKTPTDSQCCWQEVASGRSGARS*GWTVKG Trigger: TCCCTTCACAGTCCAGCCTCAGCTTCTTGCCCCACT...CCTTCCAGAGGCTACCTCCTGCCAGCAGCATTGAGAGTCTGTAGGTGTTTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR GCA 90 bp | GAGCCCACCAACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAACACACCAGCTCTACTTGGTaGGGGAGGAGCCGCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: EPTNIPQEWRRTSPSLKHTSSTW*GRSRIS Trigger: GGAGATGCGGCTCCTCCCGCACCAAGTAGAGCTGGT...GTGTTTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTTGGTGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR TCA 90 bp | CCTAAAACACCTACAGACTCTCAATGCTGCTGGCAGGAGGTAGCCTCTGGAAGGGCTGAGGCTGGACTGTaGAGGGAATGTTCCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKTPTDSQCCWQEVASGRAEAGL*RECSRD Trigger: ATCCCTGGAACATTCCCTTCACAGTCCAGCCTCAGC...CCTTCCAGAGGCTACCTCCTGCCAGCAGCATTGAGAGTCTGTAGGTGTTTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CCA 90 bp | ACCCGAGCCCACCAACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAAGATGGGCGGGCTCCTaGATTCTTCCAATTGGTTCG | + |
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Preference number: 4 (lower is better) Translates to: TRAHQHSTRMEENLTLPKRWAGS*ILPIGS Trigger: CGAACCAATTGGAAGAATCCAGGAGCCCGCCCATCT...TTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTTGGTGGGCTCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CCA 90 bp | GCCCACCAACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAACACCTAGATGGGCGGGCTCCTaGATTCTTCCAATTGGTTCG | + |
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Preference number: 4 (lower is better) Translates to: AHQHSTRMEENLTLPKTPRWAGS*ILPIGS Trigger: CGAACCAATTGGAAGAATCCAGGAGCCCGCCCATCT...AGGTGTTTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTTGGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CCA 90 bp | GAGGAGAACCTCACCCTCCCTAAAACACCTACAGACTCTCAATGCTGCTGGCAGCACTTGAAATCTAGATaGGCGGGCTCCTGGATTCTT | + |
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Preference number: 4 (lower is better) Translates to: EENLTLPKTPTDSQCCWQHLKSR*AGSWIL Trigger: AAGAATCCAGGAGCCCGCCCATCTAGATTTCAAGTG...CTGCCAGCAGCATTGAGAGTCTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR GCA 90 bp | TGGCCTAAAACATGCACTCAAATCACGACTCTTGTGTATGCCATGGTGCAATATACCAGCTCTACTTGGTaGGGGAGGAGCCGCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: WPKTCTQITTLVYAMVQYTSSTW*GRSRIS Trigger: GGAGATGCGGCTCCTCCCGCACCAAGTAGAGCTGGT...ATATTGCACCATGGCATACACAAGAGTCGTGATTTGAGTGCATGTTTTAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR GCA 90 bp | ACCCGAGCCCACCAACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAATTTTCATCAGGTCATaGAGAACGTTCCTGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: TRAHQHSTRMEENLTLPKIFIRS*RTFLSP Trigger: AGGTGACAGGAACGTTCTGCATGACCTGATGAAAAT...TTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTTGGTGGGCTCGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR TCA 90 bp | ATGTTGAATGAGAAGTTGTTGAGGAAAAGGGGGACTTGGAAGTGGTGGATTAAAAGTGGGGCAAGAAGCTaGGGCTGGACTGTGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: MLNEKLLRKRGTWKWWIKSGARS*GWTVKG Trigger: TCCCTTCACAGTCCAGCCTCAGCTTCTTGCCCCACT...TTTAATCCACCACTTCCAAGTCCCCCTTTTCCTCAACAACTTCTCATTCAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CCA 90 bp | AACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAACACCTACAGACTCACTTGAAATCTAGATaGGCGGGCTCCTGGATTCTT | + |
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Preference number: 4 (lower is better) Translates to: NIPQEWRRTSPSLKHLQTHLKSR*AGSWIL Trigger: AAGAATCCAGGAGCCCGCCCATCTAGATTTCAAGTG...AGTCTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR TCA 90 bp | AAGTGGTGGATTAAAAGAAACAATGGGGGTAGGTACAATCTGATCCAAGTATATGCTGAGGCTGGACTGTaGAGGGAATGTTCCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: KWWIKRNNGGRYNLIQVYAEAGL*RECSRD Trigger: ATCCCTGGAACATTCCCTTCACAGTCCAGCCTCAGC...ATATACTTGGATCAGATTGTACCTACCCCCATTGTTTCTTTTAATCCACCACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR GCA 90 bp | TGGCCTAAAACATGCACTCAAATCACGACTCTTGTGTATGCCATGGTGCAATATGTTTTGGATTTGGGATaGTTGTACTCTGAACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: WPKTCTQITTLVYAMVQYVLDLG*LYSEPR Trigger: TCGAGGTTCAGAGTACAAGCATCCCAAATCCAAAAC...ATATTGCACCATGGCATACACAAGAGTCGTGATTTGAGTGCATGTTTTAGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR TCA 90 bp | TGGCCTAAAACATGCACTCAAATCACGACTCTTGTGTATGCCATGGTGCAATATGAAGAGTTAGCCTTCTaGAGTTGCTGTAAAAATGAC | + |
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Preference number: 4 (lower is better) Translates to: WPKTCTQITTLVYAMVQYEELAF*SCCKND Trigger: GTCATTTTTACAGCAACTTCAGAAGGCTAACTCTTC...ATATTGCACCATGGCATACACAAGAGTCGTGATTTGAGTGCATGTTTTAGGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR GCA 90 bp | AAGTGGTGGATTAAAAGAAACAATGGGGGTAGGTACAATCTGATCCAAGTATATGTTTTGGATTTGGGATaGTTGTACTCTGAACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: KWWIKRNNGGRYNLIQVYVLDLG*LYSEPR Trigger: TCGAGGTTCAGAGTACAAGCATCCCAAATCCAAAAC...ATATACTTGGATCAGATTGTACCTACCCCCATTGTTTCTTTTAATCCACCACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CCA 90 bp | GGATACTTGAAGTTTGGCTGTAGGATGCTCGTTACCAGCTCTACTTaGTGCGGGAGGAGCCGCATCTCCACAGACCGGGCCAGCAGATTG | + |
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Preference number: 5 (lower is better) Translates to: GYLKFGCRMLVTSST*CGRSRISTDRASRL Trigger: CAATCTGCTGGCCCGGTCTGTGGAGATGCGGCTCCTCCCGCACCAAGTAGAGCTGGTAACGAGCATCCTACAGCCAAACTTCAAGTATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS GCA 90 bp | TACTTGAAGTTTGGCTGTAGGATGCTCGTTACCAGCTCTACTTGGTaGGGGAGGAGCCGCATCTCCACAGACCGGGCCAGCAGATTGAGT | + |
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Preference number: 5 (lower is better) Translates to: YLKFGCRMLVTSSTW*GRSRISTDRASRLS Trigger: ACTCAATCTGCTGGCCCGGTCTGTGGAGATGCGGCTCCTCCCGCACCAAGTAGAGCTGGTAACGAGCATCCTACAGCCAAACTTCAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CCA 90 bp | CTTGCAATGTCTGCGACATTCAAGTTAGCCTCCAGGTCCGTTGATTaGACATGTATGAAGGGCTTGGGAGCAGACACTTCAGGCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LAMSATFKLASRSVD*TCMKGLGADTSGSG Trigger: TCCAGAGCCTGAAGTGTCTGCTCCCAAGCCCTTCATACATGTCCAATCAACGGACCTGGAGGCTAACTTGAATGTCGCAGACATTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CAA 90 bp | AACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAACACCTACAGACTGACCGGGCCAGCAGATaGAGTTGGCTATCACTGAGC | + |
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Preference number: 5 (lower is better) Translates to: NIPQEWRRTSPSLKHLQTDRASR*SWLSLS Trigger: GCTCAGTGATAGCCAACTCAATCTGCTGGCCCGGTC...AGTCTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CAA 90 bp | AGGAGCCATAGCATCTTTATTCCCACTGGCCTAAAACATGCACTCAAATCACGAGGTCGGAGGCTGGGCTaGAAGGAAGAGTTAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: RSHSIFIPTGLKHALKSRGRRLG*KEELAF Trigger: GAAGGCTAACTCTTCCTTCAAGCCCAGCCTCCGACC...TCGTGATTTGAGTGCATGTTTTAGGCCAGTGGGAATAAAGATGCTATGGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CAA 90 bp | CATAGCATCTTTATTCCCACTGGCCTAAAACATGCACTCAAATCACGACTCTTGGACCGGGCCAGCAGATaGAGTTGGCTATCACTGAGC | + |
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Preference number: 5 (lower is better) Translates to: HSIFIPTGLKHALKSRLLDRASR*SWLSLS Trigger: GCTCAGTGATAGCCAACTCAATCTGCTGGCCCGGTC...CAAGAGTCGTGATTTGAGTGCATGTTTTAGGCCAGTGGGAATAAAGATGCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CAA 90 bp | TGGCCTAAAACATGCACTCAAATCACGACTCTTGTGTATGCCATGGTGCAATATGGTCGGAGGCTGGGCTaGAAGGAAGAGTTAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: WPKTCTQITTLVYAMVQYGRRLG*KEELAF Trigger: GAAGGCTAACTCTTCCTTCAAGCCCAGCCTCCGACC...ATATTGCACCATGGCATACACAAGAGTCGTGATTTGAGTGCATGTTTTAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CAA 90 bp | AGGAGCCATAGCATCTTTATTCCCACTGGCCTAAAACATGCACTCAAATCACGAGGCCAGCAGATTGAGTaGGCTATCACTGAGCACCAT | + |
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Preference number: 5 (lower is better) Translates to: RSHSIFIPTGLKHALKSRGQQIE*AITEHH Trigger: ATGGTGCTCAGTGATAGCCAACTCAATCTGCTGGCC...TCGTGATTTGAGTGCATGTTTTAGGCCAGTGGGAATAAAGATGCTATGGCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CCA 90 bp | CATGCAGAACGTTCCTGTCACCTTCATAGAGCATGGACAGGAAACTaGACAACACAACTTCTTGAACATCCTTTGAGAGTTCAGGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: HAERSCHLHRAWTGN*TTQLLEHPLRVQAV Trigger: TACTGCCTGAACTCTCAAAGGATGTTCAAGAAGTTGTGTTGTCCAGTTTCCTGTCCATGCTCTATGAAGGTGACAGGAACGTTCTGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CAA 90 bp | AACATTCCACAAGAATGGAGGAGAACCTCACCCTCCCTAAAACACCTACAGACTATAGGCGGAATTTGGTaGCATCTGACAAGCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: NIPQEWRRTSPSLKHLQTIGGIW*HLTSIP Trigger: TGGAATGCTTGTCAGATGCAACCAAATTCCGCCTAT...AGTCTGTAGGTGTTTTAGGGAGGGTGAGGTTCTCCTCCATTCTTGTGGAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CAA 90 bp | CTTTATTCCCACTGGCCTAAAACATGCACTCAAATCACGACTCTTGTGTATGCCAGGTCAACACATGGGTaGCTAGAATCCTTTCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LYSHWPKTCTQITTLVYARSTHG*LESFRS Trigger: GCTTCGAAAGGATTCTAGCAACCCATGTGTTGACCT...GGCATACACAAGAGTCGTGATTTGAGTGCATGTTTTAGGCCAGTGGGAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CAA 90 bp | AGACAAATGTTGAATGAGAAGTTGTTGAGGAAAAGGGGGACTTGGAAGTGGTGGAGGTCAACACATGGGTaGCTAGAATCCTTTCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RQMLNEKLLRKRGTWKWWRSTHG*LESFRS Trigger: GCTTCGAAAGGATTCTAGCAACCCATGTGTTGACCT...CCACCACTTCCAAGTCCCCCTTTTCCTCAACAACTTCTCATTCAACATTTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS-3UTR CAA 90 bp | AGACAAATGTTGAATGAGAAGTTGTTGAGGAAAAGGGGGACTTGGAAGTGGTGGATAGGCGGAATTTGGTaGCATCTGACAAGCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: RQMLNEKLLRKRGTWKWWIGGIW*HLTSIP Trigger: TGGAATGCTTGTCAGATGCAACCAAATTCCGCCTAT...CCACCACTTCCAAGTCCCCCTTTTCCTCAACAACTTCTCATTCAACATTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS GCA 72 bp | TTTGGCTGTAGGATGCTCGTTACCAGCTCTACTTGGTaGGGGAGGAGCCGCATCTCCACAGACCGGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FGCRMLVTSSTW*GRSRISTDRAS Trigger: GCTGGCCCGGTCTGTGGAGATGCGGCTCCTCCCGCACCAAGTAGAGCTGGTAACGAGCATCCTACAGCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CCA 72 bp | TCTGCGACATTCAAGTTAGCCTCCAGGTCCGTTGATTaGACATGTATGAAGGGCTTGGGAGCAGACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SATFKLASRSVD*TCMKGLGADTS Trigger: TGAAGTGTCTGCTCCCAAGCCCTTCATACATGTCCAATCAACGGACCTGGAGGCTAACTTGAATGTCGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CAA 90 bp | TTCCATAGAGAGCAGACAAGGGCATCTTGGCTTCCAAATCCCAAGTaGACCTGGGATTATTCAGCTCCATCTTCAGACCACACTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FHREQTRASWLPNPK*TWDYSAPSSDHTPP Trigger: TGGAGGAGTGTGGTCTGAAGATGGAGCTGAATAATCCCAGGTCAACTTGGGATTTGGAAGCCAAGATGCCCTTGTCTGCTCTCTATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS TCA 72 bp | TCTGACAAGCATTCCACAGGCCTCAGATCTCTTCCTTaGAGCTTTTTAACCACATCCTTGCTAGCCCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SDKHSTGLRSLP*SFLTTSLLARS Trigger: TGACCGGGCTAGCAAGGATGTGGTTAAAAAGCTTCAAGGAAGAGATCTGAGGCCTGTGGAATGCTTGTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CCA 72 bp | ACAAGGGCATCTTGGCTTCCAAATCCCAAGTTGACCTaGGATTATTCAGCTCCATCTTCAGACCACACTCCT | + |
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Preference number: 6 (lower is better) Translates to: TRASWLPNPKLT*DYSAPSSDHTP Trigger: AGGAGTGTGGTCTGAAGATGGAGCTGAATAATCCCAGGTCAACTTGGGATTTGGAAGCCAAGATGCCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS TCA 72 bp | GTTTCCCAACCTGATCGAGGAGTCTCCTGGAGTATGTaGAATAGGCGGAATTTGGTTGCATCTGACAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: VSQPDRGVSWSM*NRRNLVASDKH Trigger: ATGCTTGTCAGATGCAACCAAATTCCGCCTATTTCACATACTCCAGGAGACTCCTCGATCAGGTTGGGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS TCA 72 bp | GTCGTGTTTGTTCAGAAACTTCATATTGTAGGCACTTaGAATCTAGATGGGCGGGCTCCTGGATTCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: VVFVQKLHIVGT*NLDGRAPGFFQ Trigger: TTGGAAGAATCCAGGAGCCCGCCCATCTAGATTTCAAGTGCCTACAATATGAAGTTTCTGAACAAACACGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CCA 72 bp | TATTGTAGGCACTTGAAATCTAGATGGGCGGGCTCCTaGATTCTTCCAATTGGTTCGATGTCATTTATCCAC | + |
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Preference number: 6 (lower is better) Translates to: YCRHLKSRWAGS*ILPIGSMSFIH Trigger: GTGGATAAATGACATCGAACCAATTGGAAGAATCCAGGAGCCCGCCCATCTAGATTTCAAGTGCCTACAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CCA 72 bp | TCAGAAACTTCATATTGTAGGCACTTGAAATCTAGATaGGCGGGCTCCTGGATTCTTCCAATTGGTTCGATG | + |
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Preference number: 6 (lower is better) Translates to: SETSYCRHLKSR*AGSWILPIGSM Trigger: CATCGAACCAATTGGAAGAATCCAGGAGCCCGCCCATCTAGATTTCAAGTGCCTACAATATGAAGTTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CCA 72 bp | CGTTCCTGTCACCTTCATAGAGCATGGACAGGAAACTaGACAACACAACTTCTTGAACATCCTTTGAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: RSCHLHRAWTGN*TTQLLEHPLRV Trigger: AACTCTCAAAGGATGTTCAAGAAGTTGTGTTGTCCAGTTTCCTGTCCATGCTCTATGAAGGTGACAGGAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CAA 72 bp | ACAGGAAACTGGACAACACAACTTCTTGAACATCCTTaGAGAGTTCAGGCAGTAGTCGTGTTTGTTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TGNWTTQLLEHP*RVQAVVVFVQK Trigger: TTTCTGAACAAACACGACTACTGCCTGAACTCTCAAAGGATGTTCAAGAAGTTGTGTTGTCCAGTTTCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CAA 90 bp | AGAGCATGGACAGGAAACTGGACAACACAACTTCTTGAACATCCTTaGAGAGTTCAGGCAGTAGTCGTGTTTGTTCAGAAACTTCATATT | + |
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Preference number: 6 (lower is better) Translates to: RAWTGNWTTQLLEHP*RVQAVVVFVQKLHI Trigger: AATATGAAGTTTCTGAACAAACACGACTACTGCCTGAACTCTCAAAGGATGTTCAAGAAGTTGTGTTGTCCAGTTTCCTGTCCATGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS CCA 72 bp | CAGTTTCCTGTTTTGAAGAATTTCCAGTTTTGGATTTaGGATGCTTGTACTCTGAACCTCGATGTTGTATCC | + |
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Preference number: 6 (lower is better) Translates to: QFPVLKNFQFWI*DACTLNLDVVS Trigger: GGATACAACATCGAGGTTCAGAGTACAAGCATCCCAAATCCAAAACTGGAAATTCTTCAAAACAGGAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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| CDS TCA 72 bp | ATAAATGTGGGCAACTTATCCAACAGTTTCCTGTTTTaGAGAATTTCCAGTTTTGGATTTGGGATGCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: INVGNLSNSFLF*RISSFGFGMLV Trigger: TACAAGCATCCCAAATCCAAAACTGGAAATTCTTCAAAACAGGAAACTGTTGGATAAGTTGCCCACATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089894.6 ENSMUST00000185526.7 ENSMUST00000190682.7 |
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