Pregenerated sensors for GSDMA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064224Ensembl transcript IDs: ENSMUST00000073295.3, ENSMUST00000107508.9
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCCGAGGGAGCCACGCTaGGTGTCTGCACCTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: WVLSWRTEGERHIERQDEPREPR*VSAPPV Trigger: CACTGGAGGTGCAGACACTCAGCGTGGCTCCCTCGG...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR TCA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGTGTGCTGCTTTGTaGCAGACCCGCAGTCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: WVLSWRTEGERHIERQDEQCAAL*QTRSPL Trigger: AAGGGGACTGCGGGTCTGTCACAAAGCAGCACACTG...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGGCACCTCCAGTGTGCTaGTTTGTGACAGACCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: WVLSWRTEGERHIERQDEAPPVC*FVTDPQ Trigger: CTGCGGGTCTGTCACAAAGCAGCACACTGGAGGTGC...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | GGCTTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAGCCCCTTCAAGCTTCTaGTCAAGGTCCTGGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GLVGAELEDRRRETYREAAPSSF*SRSWSS Trigger: AGAGCTCCAGGACCTTGAGCAGAAGCTTGAAGGGGC...TGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR TCA 90 bp | TTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATTCCTGCTTAGCAGGTaGAGGAGGGAGAGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LVGAELEDRRRETYREARFLLSR*RRERPA Trigger: TGCTGGCCTCTCCCTCCTTCACCTGCTAAGCAGGAA...TCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | GGCTTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCACCAGTAGAGCCAAGCTaGGGAGAGAGAAGATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GLVGAELEDRRRETYREAPVEPS*GERRWH Trigger: ATGCCATCTTCTCTCTCCCCAGCTTGGCTCTACTGG...TGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCCAGGACACAGCCCTTaGGGATGGTTACAGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: WVLSWRTEGERHIERQDEPGHSP*GWLQPC Trigger: ACAAGGCTGTAACCATCCCCAAGGGCTGTGTCCTGG...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR TCA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGTCCAGGGTCACTTTCTaGCCCTTGTCTAAAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: WVLSWRTEGERHIERQDESRVTF*PLSKAP Trigger: AGGGGCTTTAGACAAGGGTCAGAAAGTGACCCTGGA...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | TTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATCTGCACCTCCAGTGTaGTGCTTTGTGACAGACCCG | + |
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Preference number: 4 (lower is better) Translates to: LVGAELEDRRRETYREARSAPPV*CFVTDP Trigger: CGGGTCTGTCACAAAGCAGCACACTGGAGGTGCAGA...TCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGGGAGCTTCGACCCACTaGACTCAACTTCTCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: VLSWRTEGERHIERQDEQGASTH*TQLLHF Trigger: GAAGTGGAGAAGTTGAGTCCAGTGGGTCGAAGCTCC...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR TCA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGGAACGAGTGGTCTGCTaGCAGTTTCCTCTCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VLSWRTEGERHIERQDEQERVVC*QFPLLL Trigger: AAGAAGGAGAGGAAACTGTCAGCAGACCACTCGTTC...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGCTGCTTGGCTTCTACTaGCTCCATCACCACATACAG | + |
|
Preference number: 4 (lower is better) Translates to: VLSWRTEGERHIERQDEQLLGFY*LHHHIQ Trigger: CTGTATGTGGTGATGGAGGCAGTAGAAGCCAAGCAG...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGTCCACAGTAACTTCCTaGTTGGCTTCTACTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: WVLSWRTEGERHIERQDESTVTS*LASTAS Trigger: GGAGGCAGTAGAAGCCAAGCAGGAAGTTACTGTGGA...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGGACATCTTTGGGGAGTaGTTCCAGGGTCACTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VLSWRTEGERHIERQDEQDIFGE*FQGHFL Trigger: CAGAAAGTGACCCTGGAAGCACTCCCCAAAGATGTC...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | GGCTTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCATACCTTCACTGTCTTTaGCACTTCCACAAGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GLVGAELEDRRRETYREAYLHCL*HFHKSL Trigger: CAGGGACTTGTGGAAGTGCCAAAGACAGTGAAGGTA...TGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | GGCTTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCATGGGGAGAGAGAAGATaGCATTTGCGTTGCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: GLVGAELEDRRRETYREAWGERR*HLRCQF Trigger: AAACTGGCAACGCAAATGCCATCTTCTCTCTCCCCA...TGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCACAGCCCTTGGGGATaGTTACAGCCTTGTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WVLSWRTEGERHIERQDEHSPWG*LQPCCC Trigger: ACAACAACAAGGCTGTAACCATCCCCAAGGGCTGTG...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | TTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGAACAGCAGGACATCTTTaGGGAGTGCTTCCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LVGAELEDRRRETYREARTAGHL*GVLPGS Trigger: TGACCCTGGAAGCACTCCCCAAAGATGTCCTGCTGT...TCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGAGAGAAGATGGCATTTaGGTTGCCAGTTTGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VLSWRTEGERHIERQDEQREDGI*VASLLH Trigger: GTGGAGCAAACTGGCAACGCAAATGCCATCTTCTCT...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | GGCTTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGTTCTGCTCCAAGGTaGTTTCAACCAGCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: GLVGAELEDRRRETYREASSAPR*FQPASV Trigger: AACTGAAGCTGGTTGAAAGCACCTTGGAGCAGAACT...TGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | GGCTTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCATCCCCAGATATCATCTaGGTAGGAGATATGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GLVGAELEDRRRETYREASPDII*VGDMKA Trigger: TGCCTTCATATCTCCTACCCAGATGATATCTGGGGA...TGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR TCA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGTACAGGTTCTTCTCATaGTACCTCATCTCGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VLSWRTEGERHIERQDEQYRFFS*YLISFR Trigger: CCTGAACGAGATGAGGTATCATGAGAAGAACCTGTA...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | TTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATTTGCGTTGCCAGTTTaGTCCACAGTAACTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LVGAELEDRRRETYREARFALPV*STVTSC Trigger: GCAGGAAGTTACTGTGGAGCAAACTGGCAACGCAAA...TCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | TTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATCTTGCAGGAAGTTCTaGTCCAAGGTGCTTTCAACC | + |
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Preference number: 4 (lower is better) Translates to: LVGAELEDRRRETYREARSCRKF*SKVLST Trigger: GGTTGAAAGCACCTTGGAGCAGAACTTCCTGCAAGA...TCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | TTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATTCTGCTCAAGGTCCTaGAGCTCTTTCTTCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LVGAELEDRRRETYREARFCSRS*SSFFFP Trigger: AGGAAAGAAGAAAGAGCTCCAGGACCTTGAGCAGAA...TCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR GCA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGATCTTAGGGAAGGTTTaGATGCTGTCATTGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: VLSWRTEGERHIERQDEQILGKV*MLSLQM Trigger: CATTTGCAATGACAGCATGCAAACCTTCCCTAAGAT...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CCA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGACAAGTCCCTGTACTTaGACATCCAGCATATTCTTA | + |
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Preference number: 4 (lower is better) Translates to: VLSWRTEGERHIERQDEQTSPCT*TSSIFL Trigger: TAAGAATATGCTGGATGTCCAAGTACAGGGACTTGT...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS CCA 90 bp | TTGTGGCGAGTGTCTGGATCCCACGCGTACTGGGGGCCTGATCTCTaGACTTCCAGGCCGCTTAGTCCCACCAGTGCTTCCGTTAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: LWRVSGSHAYWGPDL*TSRPLSPTSASVRV Trigger: GACCCTAACGGAAGCACTGGTGGGACTAAGCGGCCTGGAAGTCCAGAGATCAGGCCCCCAGTACGCGTGGGATCCAGACACTCGCCACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS TCA 90 bp | CGAGGGAGCCACGCTGAGTGTCTGCACCTCCAGTGTGCTGCTTTGTaGCAGACCCGCAGTCCCCTTTACCTTCACTGTCTTTGGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: RGSHAECLHLQCAAL*QTRSPLYLHCLWHF Trigger: GAAGTGCCAAAGACAGTGAAGGTAAAGGGGACTGCGGGTCTGTCACAAAGCAGCACACTGGAGGTGCAGACACTCAGCGTGGCTCCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS TCA 90 bp | GTTTCCTCTCCTTCTTCAAGTTCTCCAGAGCCGAGGGAGCCACGCTaGGTGTCTGCACCTCCAGTGTGCTGCTTTGTGACAGACCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: VSSPSSSSPEPREPR*VSAPPVCCFVTDPQ Trigger: CTGCGGGTCTGTCACAAAGCAGCACACTGGAGGTGCAGACACTCAGCGTGGCTCCCTCGGCTCTGGAGAACTTGAAGAAGGAGAGGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS GCA 90 bp | GGAGAGTGTAGTCGGTGCGCACATAGCGGGCTCCCCAGAACAATGTaGTCTTCCTCTTCCTCAGCACCAGGCAGAAGGGACGAAAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: GECSRCAHSGLPRTM*SSSSSAPGRRDESV Trigger: AACACTTTCGTCCCTTCTGCCTGGTGCTGAGGAAGAGGAAGAGCACATTGTTCTGGGGAGCCCGCTATGTGCGCACCGACTACACTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGGCCAGGACACAGCCCTaGGGGATGGTTACAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: WVLSWRTEGERHIERQDEARTQP*GMVTAL Trigger: CAAGGCTGTAACCATCCCCAAGGGCTGTGTCCTGGC...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | GGCTTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAGGGATGGTTACAGCCTaGTTGTTGTTCAAGGATCCC | + |
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Preference number: 5 (lower is better) Translates to: GLVGAELEDRRRETYREAGMVTA*LLFKDP Trigger: GGGATCCTTGAACAACAACAAGGCTGTAACCATCCC...TGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS CCA 90 bp | CTCTCAGTAGTCTCACTCGATAGGCCAGGACACAGCCCTTGGGGATaGTTACAGCCTTGTTGTTGTTCAAGGATCCCTGTAGTCCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: LSVVSLDRPGHSPWG*LQPCCCSRIPVVPV Trigger: TACTGGGACTACAGGGATCCTTGAACAACAACAAGGCTGTAACCATCCCCAAGGGCTGTGTCCTGGCCTATCGAGTGAGACTACTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS TCA 90 bp | GTTCTTCTCATGATACCTCATCTCGTTCAGGAACGAGTGGTCTGCTaGCAGTTTCCTCTCCTTCTTCAAGTTCTCCAGAGCCGAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: VLLMIPHLVQERVVC*QFPLLLQVLQSRGS Trigger: GCTCCCTCGGCTCTGGAGAACTTGAAGAAGGAGAGGAAACTGTCAGCAGACCACTCGTTCCTGAACGAGATGAGGTATCATGAGAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGAAGGGACGAAAGTGTTaGAAGTCGATGAGGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: WVLSWRTEGERHIERQDEKGRKC*KSMRLS Trigger: AGACAGCCTCATCGACTTCAAACACTTTCGTCCCTT...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | TTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGAACAGTAACTTCCTGCTaGGCTTCTACTGCCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: LVGAELEDRRRETYREARTVTSC*ASTASI Trigger: GATGGAGGCAGTAGAAGCCAAGCAGGAAGTTACTGT...TCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGAAGATGGCATTTGCGTaGCCAGTTTGCTCCACAGTA | + |
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Preference number: 5 (lower is better) Translates to: VLSWRTEGERHIERQDEQKMAFA*PVCSTV Trigger: TACTGTGGAGCAAACTGGCAACGCAAATGCCATCTT...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | GGCTTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAGTTACAGCCTTGTTGTaGTTCAAGGATCCCTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: GLVGAELEDRRRETYREAVTALL*FKDPCS Trigger: ACTACAGGGATCCTTGAACAACAACAAGGCTGTAAC...TGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | TTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGACAACTTCTCCACTTCTaGAGTCTCTCGCTGAACCTC | + |
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Preference number: 5 (lower is better) Translates to: LVGAELEDRRRETYREARQLLHF*SLSLNL Trigger: GAGGTTCAGCGAGAGACTCAAGAAGTGGAGAAGTTG...TCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS CCA 90 bp | AAAAGACTCTCAGTAGTCTCACTCGATAGGCCAGGACACAGCCCTTaGGGATGGTTACAGCCTTGTTGTTGTTCAAGGATCCCTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: KRLSVVSLDRPGHSP*GWLQPCCCSRIPVV Trigger: GACTACAGGGATCCTTGAACAACAACAAGGCTGTAACCATCCCCAAGGGCTGTGTCCTGGCCTATCGAGTGAGACTACTGAGAGTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | GGCTTAGTGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAGTTTGCATGCTGTCATaGCAAATGTACGGAATATCC | + |
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Preference number: 5 (lower is better) Translates to: GLVGAELEDRRRETYREAVCMLS*QMYGIS Trigger: GGATATTCCGTACATTTGCAATGACAGCATGCAAAC...TGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCACTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGAACACCCTCTTTATCTaGCAGGAAGTTCTGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: WVLSWRTEGERHIERQDENTLFI*QEVLLQ Trigger: TTGGAGCAGAACTTCCTGCAAGATAAAGAGGGTGTT...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS TCA 90 bp | TGCTTGGCTTCTACTGCCTCCATCACCACATACAGGTTCTTCTCATaGTACCTCATCTCGTTCAGGAACGAGTGGTCTGCTGACAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: CLASTASITTYRFFS*YLISFRNEWSADSF Trigger: GAAACTGTCAGCAGACCACTCGTTCCTGAACGAGATGAGGTATCATGAGAAGAACCTGTATGTGGTGATGGAGGCAGTAGAAGCCAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS GCA 90 bp | TGCGTTGCCAGTTTGCTCCACAGTAACTTCCTGCTTGGCTTCTACTaGCTCCATCACCACATACAGGTTCTTCTCATGATACCTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: CVASLLHSNFLLGFY*LHHHIQVLLMIPHL Trigger: GAGATGAGGTATCATGAGAAGAACCTGTATGTGGTGATGGAGGCAGTAGAAGCCAAGCAGGAAGTTACTGTGGAGCAAACTGGCAACGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS GCA 90 bp | GAGAAGATGGCATTTGCGTTGCCAGTTTGCTCCACAGTAACTTCCTaGTTGGCTTCTACTGCCTCCATCACCACATACAGGTTCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: EKMAFALPVCSTVTS*LASTASITTYRFFS Trigger: TGAGAAGAACCTGTATGTGGTGATGGAGGCAGTAGAAGCCAAGCAGGAAGTTACTGTGGAGCAAACTGGCAACGCAAATGCCATCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS GCA 90 bp | TCAGGTTGCAGGGGGAAAACACCCTCTTTATCTTGCAGGAAGTTCTaGTCCAAGGTGCTTTCAACCAGCTTCAGTTGCACTGGTAAGATC | + |
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Preference number: 5 (lower is better) Translates to: SGCRGKTPSLSCRKF*SKVLSTSFSCTGKI Trigger: GATCTTACCAGTGCAACTGAAGCTGGTTGAAAGCACCTTGGAGCAGAACTTCCTGCAAGATAAAGAGGGTGTTTTCCCCCTGCAACCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGGATCTTAGGGAAGGTTaGCATGCTGTCATTGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: WVLSWRTEGERHIERQDEDLREG*HAVIAN Trigger: ATTTGCAATGACAGCATGCAAACCTTCCCTAAGATC...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS-3UTR CAA 90 bp | TGGGTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGTTCTTAAAGCTAAAGTaGCCACTGTCTGTCAGATCT | + |
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Preference number: 5 (lower is better) Translates to: WVLSWRTEGERHIERQDEFLKLK*PLSVRS Trigger: AGATCTGACAGACAGTGGCAACTTTAGCTTTAAGAA...CTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS CCA 90 bp | ATCTCCCCAATGAGCTTCTCTTCTTCTGGCTCTTCAGATATCATCTaGGTAGGAGATATGAAGGCACTGCAAGGTACACGCCTGATCTTA | + |
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Preference number: 5 (lower is better) Translates to: ISPMSFSSSGSSDII*VGDMKALQGTRLIL Trigger: TAAGATCAGGCGTGTACCTTGCAGTGCCTTCATATCTCCTACCCAGATGATATCTGAAGAGCCAGAAGAAGAGAAGCTCATTGGGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073295.3 |
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| CDS-3UTR CAA 90 bp | GTGCTGAGCTGGAGGACAGAAGGAGAGAGACATATCGAGAGGCAAGATGAGCAGGGAATATCCCAAAGATaGAACAAAAAGACTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: VLSWRTEGERHIERQDEQGISQR*NKKTLS Trigger: ACTGAGAGTCTTTTTGTTCAATCTTTGGGATATTCC...CTGCTCATCTTGCCTCTCGATATGTCTCTCTCCTTCTGTCCTCCAGCTCAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS CCA 90 bp | TCCTTTAATGTCTTGAAGTCTTCGTGCATCTCCCCAGATATCATCTaGGTAGGAGATATGAAGGCACTGCAAGGTACACGCCTGATCTTA | + |
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Preference number: 5 (lower is better) Translates to: SFNVLKSSCISPDII*VGDMKALQGTRLIL Trigger: TAAGATCAGGCGTGTACCTTGCAGTGCCTTCATATCTCCTACCCAGATGATATCTGGGGAGATGCACGAAGACTTCAAGACATTAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS GCA 90 bp | GATATGAAGGCACTGCAAGGTACACGCCTGATCTTAGGGAAGGTTTaGATGCTGTCATTGCAAATGTACGGAATATCCCAAAGATTGAAC | + |
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Preference number: 5 (lower is better) Translates to: DMKALQGTRLILGKV*MLSLQMYGISQRLN Trigger: GTTCAATCTTTGGGATATTCCGTACATTTGCAATGACAGCATGCAAACCTTCCCTAAGATCAGGCGTGTACCTTGCAGTGCCTTCATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CCA 72 bp | GTGTCTGGATCCCACGCGTACTGGGGGCCTGATCTCTaGACTTCCAGGCCGCTTAGTCCCACCAGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VSGSHAYWGPDL*TSRPLSPTSAS Trigger: GGAAGCACTGGTGGGACTAAGCGGCCTGGAAGTCCAGAGATCAGGCCCCCAGTACGCGTGGGATCCAGACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS GCA 72 bp | AGTCGGTGCGCACATAGCGGGCTCCCCAGAACAATGTaGTCTTCCTCTTCCTCAGCACCAGGCAGAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SRCAHSGLPRTM*SSSSSAPGRRD Trigger: GTCCCTTCTGCCTGGTGCTGAGGAAGAGGAAGAGCACATTGTTCTGGGGAGCCCGCTATGTGCGCACCGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS GCA 72 bp | AAGTTCTCCAGAGCCGAGGGAGCCACGCTGAGTGTCTaGACCTCCAGTGTGCTGCTTTGTGACAGACCCGCA | + |
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Preference number: 6 (lower is better) Translates to: KFSRAEGATLSV*TSSVLLCDRPA Trigger: TGCGGGTCTGTCACAAAGCAGCACACTGGAGGTGCAGACACTCAGCGTGGCTCCCTCGGCTCTGGAGAACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CCA 72 bp | CAAAGGTTGTGGCGAGTGTCTGGATCCCACGCGTACTaGGGGCCTGATCTCTGGACTTCCAGGCCGCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: QRLWRVSGSHAY*GPDLWTSRPLS Trigger: ACTAAGCGGCCTGGAAGTCCAGAGATCAGGCCCCCAGTACGCGTGGGATCCAGACACTCGCCACAACCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS TCA 72 bp | CCTTCTTCAAGTTCTCCAGAGCCGAGGGAGCCACGCTaGGTGTCTGCACCTCCAGTGTGCTGCTTTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: PSSSSPEPREPR*VSAPPVCCFVT Trigger: TGTCACAAAGCAGCACACTGGAGGTGCAGACACTCAGCGTGGCTCCCTCGGCTCTGGAGAACTTGAAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS TCA 72 bp | CACGCTGAGTGTCTGCACCTCCAGTGTGCTGCTTTGTaGCAGACCCGCAGTCCCCTTTACCTTCACTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: HAECLHLQCAAL*QTRSPLYLHCL Trigger: AAGACAGTGAAGGTAAAGGGGACTGCGGGTCTGTCACAAAGCAGCACACTGGAGGTGCAGACACTCAGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS TCA 72 bp | CCCGAGGAAGTAGAGGATGGCATCCATAGCGTCCTTTaGCAGCAGGACATCTTTGGGGAGTGCTTCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: PEEVEDGIHSVL*QQDIFGECFQG Trigger: ACCCTGGAAGCACTCCCCAAAGATGTCCTGCTGTCAAAGGACGCTATGGATGCCATCCTCTACTTCCTCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CAA 72 bp | CTCTTCCTCAGCACCAGGCAGAAGGGACGAAAGTGTTaGAAGTCGATGAGGCTGTCTAGGGGTGTCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: LFLSTRQKGRKC*KSMRLSRGVRS Trigger: GGATCTGACACCCCTAGACAGCCTCATCGACTTCAAACACTTTCGTCCCTTCTGCCTGGTGCTGAGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CAA 90 bp | AGTCCCAGTAGAGCCAAGCTGGGGAGAGAGAAGATGGCATTTGCGTaGCCAGTTTGCTCCACAGTAACTTCCTGCTTGGCTTCTACTGCC | + |
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Preference number: 6 (lower is better) Translates to: SPSRAKLGREKMAFA*PVCSTVTSCLASTA Trigger: GGCAGTAGAAGCCAAGCAGGAAGTTACTGTGGAGCAAACTGGCAACGCAAATGCCATCTTCTCTCTCCCCAGCTTGGCTCTACTGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS GCA 72 bp | CTGGGGAGAGAGAAGATGGCATTTGCGTTGCCAGTTTaGTCCACAGTAACTTCCTGCTTGGCTTCTACTGCC | + |
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Preference number: 6 (lower is better) Translates to: LGREKMAFALPV*STVTSCLASTA Trigger: GGCAGTAGAAGCCAAGCAGGAAGTTACTGTGGAGCAAACTGGCAACGCAAATGCCATCTTCTCTCTCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CCA 72 bp | GTCTCACTCGATAGGCCAGGACACAGCCCTTGGGGATaGTTACAGCCTTGTTGTTGTTCAAGGATCCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: VSLDRPGHSPWG*LQPCCCSRIPV Trigger: TACAGGGATCCTTGAACAACAACAAGGCTGTAACCATCCCCAAGGGCTGTGTCCTGGCCTATCGAGTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CAA 72 bp | AGAGCCAAGCTGGGGAGAGAGAAGATGGCATTTGCGTaGCCAGTTTGCTCCACAGTAACTTCCTGCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RAKLGREKMAFA*PVCSTVTSCLA Trigger: AGCCAAGCAGGAAGTTACTGTGGAGCAAACTGGCAACGCAAATGCCATCTTCTCTCTCCCCAGCTTGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CAA 72 bp | AGGACACAGCCCTTGGGGATGGTTACAGCCTTGTTGTaGTTCAAGGATCCCTGTAGTCCCAGTAGAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RTQPLGMVTALL*FKDPCSPSRAK Trigger: CTTGGCTCTACTGGGACTACAGGGATCCTTGAACAACAACAAGGCTGTAACCATCCCCAAGGGCTGTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CAA 90 bp | ACAAGTCCCTGTACTTGGACATCCAGCATATTCTTAAAGCTAAAGTaGCCACTGTCTGTCAGATCTGAGGGGGAGCTGCCCGGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TSPCTWTSSIFLKLK*PLSVRSEGELPGSS Trigger: GCTGGAGCCGGGCAGCTCCCCCTCAGATCTGACAGACAGTGGCAACTTTAGCTTTAAGAATATGCTGGATGTCCAAGTACAGGGACTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CAA 90 bp | GGAGGAGAGCAGATCAGGTTGCAGGGGGAAAACACCCTCTTTATCTaGCAGGAAGTTCTGCTCCAAGGTGCTTTCAACCAGCTTCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: GGEQIRLQGENTLFI*QEVLLQGAFNQLQL Trigger: CAACTGAAGCTGGTTGAAAGCACCTTGGAGCAGAACTTCCTGCAAGATAAAGAGGGTGTTTTCCCCCTGCAACCTGATCTGCTCTCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CCA 72 bp | TGTTCAAGGATCCCTGTAGTCCCAGTAGAGCCAAGCTaGGGAGAGAGAAGATGGCATTTGCGTTGCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: CSRIPVVPVEPS*GERRWHLRCQF Trigger: AAACTGGCAACGCAAATGCCATCTTCTCTCTCCCCAGCTTGGCTCTACTGGGACTACAGGGATCCTTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CAA 90 bp | TGCTGCTTTGTGACAGACCCGCAGTCCCCTTTACCTTCACTGTCTTaGGCACTTCCACAAGTCCCTGTACTTGGACATCCAGCATATTCT | + |
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Preference number: 6 (lower is better) Translates to: CCFVTDPQSPLPSLS*ALPQVPVLGHPAYS Trigger: AGAATATGCTGGATGTCCAAGTACAGGGACTTGTGGAAGTGCCAAAGACAGTGAAGGTAAAGGGGACTGCGGGTCTGTCACAAAGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CCA 72 bp | GTCTTGAAGTCTTCGTGCATCTCCCCAGATATCATCTaGGTAGGAGATATGAAGGCACTGCAAGGTACACGC | + |
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Preference number: 6 (lower is better) Translates to: VLKSSCISPDII*VGDMKALQGTR Trigger: GCGTGTACCTTGCAGTGCCTTCATATCTCCTACCCAGATGATATCTGGGGAGATGCACGAAGACTTCAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS CAA 72 bp | TTTGCGTTGCCAGTTTGCTCCACAGTAACTTCCTGCTaGGCTTCTACTGCCTCCATCACCACATACAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FALPVCSTVTSC*ASTASITTYRF Trigger: GAACCTGTATGTGGTGATGGAGGCAGTAGAAGCCAAGCAGGAAGTTACTGTGGAGCAAACTGGCAACGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CAA 72 bp | CAGATCAGGTTGCAGGGGGAAAACACCCTCTTTATCTaGCAGGAAGTTCTGCTCCAAGGTGCTTTCAACCAG | + |
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Preference number: 6 (lower is better) Translates to: QIRLQGENTLFI*QEVLLQGAFNQ Trigger: CTGGTTGAAAGCACCTTGGAGCAGAACTTCCTGCAAGATAAAGAGGGTGTTTTCCCCCTGCAACCTGATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS TCA 72 bp | TCTACTGCCTCCATCACCACATACAGGTTCTTCTCATaGTACCTCATCTCGTTCAGGAACGAGTGGTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: STASITTYRFFS*YLISFRNEWSA Trigger: AGCAGACCACTCGTTCCTGAACGAGATGAGGTATCATGAGAAGAACCTGTATGTGGTGATGGAGGCAGTAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS TCA 72 bp | CTTGAGTCTCTCGCTGAACCTCTTCCTTTAATGTCTTaGAGTCTTCGTGCATCTCCCCAGATATCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LESLAEPLPLMS*SLRASPQISSG Trigger: CCCAGATGATATCTGGGGAGATGCACGAAGACTTCAAGACATTAAAGGAAGAGGTTCAGCGAGAGACTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107508.9 |
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| CDS GCA 72 bp | GCACTGCAAGGTACACGCCTGATCTTAGGGAAGGTTTaGATGCTGTCATTGCAAATGTACGGAATATCCCAA | + |
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Preference number: 6 (lower is better) Translates to: ALQGTRLILGKV*MLSLQMYGISQ Trigger: TTGGGATATTCCGTACATTTGCAATGACAGCATGCAAACCTTCCCTAAGATCAGGCGTGTACCTTGCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS GCA 72 bp | CACCCTCTTTATCTTGCAGGAAGTTCTGCTCCAAGGTaGTTTCAACCAGCTTCAGTTGCACTGGTAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: HPLYLAGSSAPR*FQPASVALVRS Trigger: AGATCTTACCAGTGCAACTGAAGCTGGTTGAAAGCACCTTGGAGCAGAACTTCCTGCAAGATAAAGAGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CCA 72 bp | ATGAGCTTCTCTTCTTCTGGCTCTTCAGATATCATCTaGGTAGGAGATATGAAGGCACTGCAAGGTACACGC | + |
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Preference number: 6 (lower is better) Translates to: MSFSSSGSSDII*VGDMKALQGTR Trigger: GCGTGTACCTTGCAGTGCCTTCATATCTCCTACCCAGATGATATCTGAAGAGCCAGAAGAAGAGAAGCTCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073295.3 |
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| CDS GCA 72 bp | AGTTTGCTCCACAGTAACTTCCTGCTTGGCTTCTACTaGCTCCATCACCACATACAGGTTCTTCTCATGATA | + |
|
Preference number: 6 (lower is better) Translates to: SLLHSNFLLGFY*LHHHIQVLLMI Trigger: TATCATGAGAAGAACCTGTATGTGGTGATGGAGGCAGTAGAAGCCAAGCAGGAAGTTACTGTGGAGCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS CCA 72 bp | GTCTTCGTGCATCTCCCCAATGAGCTTCTCTTCTTCTaGCTCTTCAGATATCATCTGGGTAGGAGATATGAA | + |
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Preference number: 6 (lower is better) Translates to: VFVHLPNELLFF*LFRYHLGRRYE Trigger: TTCATATCTCCTACCCAGATGATATCTGAAGAGCCAGAAGAAGAGAAGCTCATTGGGGAGATGCACGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073295.3 |
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| CDS CAA 90 bp | CTGCAAGGTACACGCCTGATCTTAGGGAAGGTTTGCATGCTGTCATaGCAAATGTACGGAATATCCCAAAGATTGAACAAAAAGACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQGTRLILGKVCMLS*QMYGISQRLNKKTL Trigger: GAGAGTCTTTTTGTTCAATCTTTGGGATATTCCGTACATTTGCAATGACAGCATGCAAACCTTCCCTAAGATCAGGCGTGTACCTTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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| CDS GCA 72 bp | AAGTTCTGCTCCAAGGTGCTTTCAACCAGCTTCAGTTaGACTGGTAAGATCTTTTTCTCCAAGGATTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: KFCSKVLSTSFS*TGKIFFSKDFT Trigger: AGTAAAATCCTTGGAGAAAAAGATCTTACCAGTGCAACTGAAGCTGGTTGAAAGCACCTTGGAGCAGAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073295.3 ENSMUST00000107508.9 |
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