Pregenerated sensors for GSDMA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017211Ensembl transcript IDs: ENSMUST00000017355.12, ENSMUST00000093938.10
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGCCCTTGTTATCCTGGAACCAGCCTGTAGACAAGGCTGGTCTTaGACTCACTGCCTCTGCCTCCTGACTGCTGGGATTAAAGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: IALVILEPACRQGWS*THCLCLLTAGIKGE Trigger: TTCACCTTTAATCCCAGCAGTCAGGAGGCAGAGGCAGTGAGTTCAAGACCAGCCTTGTCTACAGGCTGGTTCCAGGATAACAAGGGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| 3UTR-3UTR GCA 90 bp | TTATCCTGGAACCAGCCTGTAGACAAGGCTGGTCTTGAACTCACTGCCTCTGCCGGGATTAAAGGTGAATaGCACCATCTTGGAGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: LSWNQPVDKAGLELTASAGIKGE*HHLGVF Trigger: AAACACTCCAAGATGGTGGCATTCACCTTTAATCCC...GGCAGAGGCAGTGAGTTCAAGACCAGCCTTGTCTACAGGCTGGTTCCAGGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| 3UTR TCA 72 bp | GACAAGGCTGGTCTTGAACTCACTGCCTCTGCCTCCTaGCTGCTGGGATTAAAGGTGAATGCCACCATCTTG | + |
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Preference number: 3 (lower is better) Translates to: DKAGLELTASAS*LLGLKVNATIL Trigger: CAAGATGGTGGCATTCACCTTTAATCCCAGCAGTCAGGAGGCAGAGGCAGTGAGTTCAAGACCAGCCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR GCA 90 bp | CTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGCAGTCCCTGAGGGGGAGCTaGCCGGCTCCAGCACATCCA | + |
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Preference number: 4 (lower is better) Translates to: LGVFQTEHSKAGKALGQQSLRGS*PAPAHP Trigger: TGGATGTGCTGGAGCCGGGCAGCTCCCCCTCAGGGA...CTGCTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017355.12 |
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| CDS-3UTR TCA 90 bp | CACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGTCCCTGCTTAGCAGGTaGAGGAGGGAGAGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HHLGVFQTEHSKAGKALGSLLSR*RRERPA Trigger: TGCTGGCCTCTCCCTCCTTCACCTGCTAAGCAGGGA...CCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR GCA 90 bp | GTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGCAGGCAGAGTCTGTACCTCCAGCGTaGTGCTTTGTGACAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VFQTEHSKAGKALGQQAESVPPA*CFVTGP Trigger: TGGGCCTGTCACAAAGCAGCACGCTGGAGGTACAGA...CTCTGCCTGCTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | TTGTTATCCTGGAACCAGCCTGTAGACAAGGCTGGTCTTGAACTCACTGCCTCTCCGTGGGAGCCACACTaGGCATCTGTACCTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LLSWNQPVDKAGLELTASPWEPH*ASVPPA Trigger: CGCTGGAGGTACAGATGCTCAGTGTGGCTCCCACGG...AGAGGCAGTGAGTTCAAGACCAGCCTTGTCTACAGGCTGGTTCCAGGATAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGTGGGGCCCTGATCTCTaGACTTCCAGGCCGCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: HLGVFQTEHSKAGKALGQWGPDL*TSRPLS Trigger: ACTAAGCGGCCTGGAAGTCCAGAGATCAGGGCCCCA...CTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | CTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGCAGAGGGCACAGAGGTTGTaGCAAGTGTCTGGATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGVFQTEHSKAGKALGQQRAQRL*QVSGFH Trigger: GTGGAATCCAGACACTTGTCACAACCTCTGTGCCCT...CTGCTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | TTGTTATCCTGGAACCAGCCTGTAGACAAGGCTGGTCTTGAACTCACTGCCTCTTCCCTGCTTAGCAGGTaGAGGAGGGAGAGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLSWNQPVDKAGLELTASSLLSR*RRERPA Trigger: TGCTGGCCTCTCCCTCCTTCACCTGCTAAGCAGGGA...AGAGGCAGTGAGTTCAAGACCAGCCTTGTCTACAGGCTGGTTCCAGGATAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCACAGCCCTTGGGGATaGTTACAGCCTCCTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: HHLGVFQTEHSKAGKALGHSPWG*LQPPCG Trigger: ACCACAAGGAGGCTGTAACCATCCCCAAGGGCTGTG...CCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCGTGTACTGGGGCCCTaGTCTCTGGACTTCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLKVNATILECFRQSTVRRVLGP*SLDFQA Trigger: GGCCTGGAAGTCCAGAGATCAGGGCCCCAGTACACG...CCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGGGAGAGTGTAGTCGGTaGGCACATAGCGGGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GLKVNATILECFRQSTVRGECSR*AHSGLP Trigger: GGGGAGCCCGCTATGTGCGCACCGACTACACTCTCC...CCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | GTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGCAGGCAGAGTCCCCAGATATCATCTaGACAGTACTGCCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: VFQTEHSKAGKALGQQAESPDII*TVLPCL Trigger: GAGACAAGGCAGTACTGTCCAGATGATATCTGGGGA...CTCTGCCTGCTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGACAGCAGGACATCTTTaGGGAGTGCTTCAAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: HHLGVFQTEHSKAGKALGTAGHL*GVLQGS Trigger: TGACCCTTGAAGCACTCCCCAAAGATGTCCTGCTGT...CCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | TTGTTATCCTGGAACCAGCCTGTAGACAAGGCTGGTCTTGAACTCACTGCCTCTGCTTCTGTTAGAATCTaGTCCTCCTCCCCGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LLSWNQPVDKAGLELTASASVRI*SSSPRE Trigger: CTCCCTCGGGGAGGAGGACCAGATTCTAACAGAAGC...AGAGGCAGTGAGTTCAAGACCAGCCTTGTCTACAGGCTGGTTCCAGGATAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CTGACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGTGGGGCCCTGATCTCTaGACTTCCAGGCCGCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: LTAGIKGECHHLGVFQTEWGPDL*TSRPLS Trigger: ACTAAGCGGCCTGGAAGTCCAGAGATCAGGGCCCCA...CTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | TTATCCTGGAACCAGCCTGTAGACAAGGCTGGTCTTGAACTCACTGCCTCTGCCACCAGGCAGAAGGGATaGAAGCGTTTGAAGTCGATG | + |
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Preference number: 4 (lower is better) Translates to: LSWNQPVDKAGLELTASATRQKG*KRLKSM Trigger: CATCGACTTCAAACGCTTCCATCCCTTCTGCCTGGT...GGCAGAGGCAGTGAGTTCAAGACCAGCCTTGTCTACAGGCTGGTTCCAGGATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | TTGTTATCCTGGAACCAGCCTGTAGACAAGGCTGGTCTTGAACTCACTGCCTCTGTACTGCCTTGTCTCTaGAGCACACACAGGGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: LLSWNQPVDKAGLELTASVLPCL*STHRGL Trigger: TAACCCCCTGTGTGTGCTTCAGAGACAAGGCAGTAC...AGAGGCAGTGAGTTCAAGACCAGCCTTGTCTACAGGCTGGTTCCAGGATAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR GCA 90 bp | TGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGACATCTTTGGGGAGTaGTTCAAGGGTCACTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CHHLGVFQTEHSKAGKALDIFGE*FKGHFV Trigger: CACGAAGTGACCCTTGAAGCACTCCCCAAAGATGTC...TAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR GCA 90 bp | GTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGCAGGCAGAGAGTTCTGTTCCAAGATaGTCTCAACCAGCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: VFQTEHSKAGKALGQQAESSVPR*SQPASV Trigger: AACTGAAGCTGGTTGAGAGCATCTTGGAACAGAACT...CTCTGCCTGCTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACACACAGCCCTTGGGGATaGTTACAGCCTCCTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LLGLKVNATILECFRQSTHSPWG*LQPPCG Trigger: ACCACAAGGAGGCTGTAACCATCCCCAAGGGCTGTG...TGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CTGACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCCAGAACACAGCCCTTaGGGATGGTTACAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LTAGIKGECHHLGVFQTEPEHSP*GWLQPP Trigger: AGGAGGCTGTAACCATCCCCAAGGGCTGTGTTCTGG...CTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CTGACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGGGAGCTTCGCCCCACTaGACTCAACTTCTCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LTAGIKGECHHLGVFQTEGASPH*TQLLHF Trigger: GAAGTGGAGAAGTTGAGTCCAGTGGGGCGAAGCTCC...CTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | ACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACGGAGCTTCGCCCCACTaGACTCAACTTCTCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: TAGIKGECHHLGVFQTEHGASPH*TQLLHF Trigger: GAAGTGGAGAAGTTGAGTCCAGTGGGGCGAAGCTCC...GTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGTTCTTTCCTAGGAGATaGCTGAGGGAAGTGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: HHLGVFQTEHSKAGKALGFFPRR*LREVSR Trigger: CCTACTCACTTCCCTCAGCCATCTCCTAGGAAAGAA...CCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CTGACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGGCTTCTGTTAGAATCTaGTCCTCCTCCCCGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LTAGIKGECHHLGVFQTEASVRI*SSSPRE Trigger: CTCCCTCGGGGAGGAGGACCAGATTCTAACAGAAGC...CTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | TGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGTTACAGCCTCCTTGTaGTTCACGGATCCCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: CHHLGVFQTEHSKAGKALVTASL*FTDPCS Trigger: ACTACAGGGATCCGTGAACCACAAGGAGGCTGTAAC...TAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | ACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGGGCACAGAGGTTGTaGCAAGTGTCTGGATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: TAGIKGECHHLGVFQTEHRAQRL*QVSGFH Trigger: GTGGAATCCAGACACTTGTCACAACCTCTGTGCCCT...GTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR GCA 90 bp | TTGTTATCCTGGAACCAGCCTGTAGACAAGGCTGGTCTTGAACTCACTGCCTCTTTCAGAGTGACTTCCTaGTTGGCTTTCACCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLSWNQPVDKAGLELTASFRVTS*LAFTTS Trigger: GGAGGTGGTGAAAGCCAAGCAGGAAGTCACTCTGAA...AGAGGCAGTGAGTTCAAGACCAGCCTTGTCTACAGGCTGGTTCCAGGATAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS-3UTR GCA 90 bp | CTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGCAGAGAGAATTTGGAAATTaGGTTGCTAGCTCGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LGVFQTEHSKAGKALGQQREFGN*VASSLQ Trigger: CTGAAGCGAGCTAGCAACGCAATTTCCAAATTCTCT...CTGCTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CTGACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGTCCTTCAGGAACGGGTaGTCTGCTGACAGTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LTAGIKGECHHLGVFQTESFRNG*SADSFL Trigger: GAGGAAACTGTCAGCAGACCACCCGTTCCTGAAGGA...CTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGGTACTGCCTTGTCTCTaGAGCACACACAGGGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: GLKVNATILECFRQSTVRVLPCL*STHRGL Trigger: TAACCCCCTGTGTGTGCTTCAGAGACAAGGCAGTAC...CCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | CATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGCTTTCTTTAATGTCTTaGAGTCTTCGTGCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: HLGVFQTEHSKAGKALGQLSLMS*SLRASP Trigger: GGGAGATGCACGAAGACTTCAAGACATTAAAGAAAG...CTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR GCA 90 bp | ACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACGACATCTTTGGGGAGTaGTTCAAGGGTCACTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: TAGIKGECHHLGVFQTEHDIFGE*FKGHFV Trigger: CACGAAGTGACCCTTGAAGCACTCCCCAAAGATGTC...GTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR GCA 90 bp | CATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGAGTTCTGTTCCAAGATaGTCTCAACCAGCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: HLGVFQTEHSKAGKALGQSSVPR*SQPASV Trigger: AACTGAAGCTGGTTGAGAGCATCTTGGAACAGAACT...CTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | TTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGACAGCAGGACATCTTTaGGGAGTGCTTCAAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LKVNATILECFRQSTVRPTAGHL*GVLQGS Trigger: TGACCCTTGAAGCACTCCCCAAAGATGTCCTGCTGT...CGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGGTCAGTACAAATGTATaGAATGCCCCACTCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: HLGVFQTEHSKAGKALGQVSTNV*NAPLIF Trigger: AAAGATGAGTGGGGCATTCCATACATTTGTACTGAC...CTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CTGACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGTTCTTTCCTAGGAGATaGCTGAGGGAAGTGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LTAGIKGECHHLGVFQTEFFPRR*LREVSR Trigger: CCTACTCACTTCCCTCAGCCATCTCCTAGGAAAGAA...CTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGTCCCCAGATATCATCTaGACAGTACTGCCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLKVNATILECFRQSTVRSPDII*TVLPCL Trigger: GAGACAAGGCAGTACTGTCCAGATGATATCTGGGGA...CCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | CTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAATCTGCTCAAGGTCCTaGAGCTCTTTCTTCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLGLKVNATILECFRQSTICSRS*SSFFFP Trigger: AGGAAAGAAGAAAGAGCTCCAGGACCTTGAGCAGAT...TGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CCA 90 bp | TTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGATCTGCTCAAGGTCCTaGAGCTCTTTCTTCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LKVNATILECFRQSTVRPICSRS*SSFFFP Trigger: AGGAAAGAAGAAAGAGCTCCAGGACCTTGAGCAGAT...CGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | ACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACCTTTCTTTAATGTCTTaGAGTCTTCGTGCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TAGIKGECHHLGVFQTEHLSLMS*SLRASP Trigger: GGGAGATGCACGAAGACTTCAAGACATTAAAGAAAG...GTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR TCA 90 bp | CTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTACCAGTGAGGGAAGGTTaGGAGAGAATTTGGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLKVNATILECFRQSTVPVREG*ERIWKL Trigger: CAATTTCCAAATTCTCTCTCAACCTTCCCTCACTGG...TACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS-3UTR CCA 90 bp | GGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGGTCAGTACAAATGTATaGAATGCCCCACTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKVNATILECFRQSTVRVSTNV*NAPLIF Trigger: AAAGATGAGTGGGGCATTCCATACATTTGTACTGAC...CCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS GCA 90 bp | GGAGAGTGTAGTCGGTGCGCACATAGCGGGCTCCCCAGAACAGTGTaGTCTTCCTCTTCCTCAGCACCAGGCAGAAGGGATGGAAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GECSRCAHSGLPRTV*SSSSSAPGRRDGSV Trigger: AACGCTTCCATCCCTTCTGCCTGGTGCTGAGGAAGAGGAAGAGCACACTGTTCTGGGGAGCCCGCTATGTGCGCACCGACTACACTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS TCA 90 bp | GTTTCCTCTCCATGTGCAAGTTCTCCAGAGCCGTGGGAGCCACACTaGGCATCTGTACCTCCAGCGTGCTGCTTTGTGACAGGCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VSSPCASSPEPWEPH*ASVPPACCFVTGPQ Trigger: CTGTGGGCCTGTCACAAAGCAGCACGCTGGAGGTACAGATGCTCAGTGTGGCTCCCACGGCTCTGGAGAACTTGCACATGGAGAGGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS TCA 90 bp | GTTTTGCTTGTATTCCCGCATCTCCTTCAGGAACGGGTGGTCTGCTaGCAGTTTCCTCTCCATGTGCAAGTTCTCCAGAGCCGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLVFPHLLQERVVC*QFPLHVQVLQSRGS Trigger: GCTCCCACGGCTCTGGAGAACTTGCACATGGAGAGGAAACTGTCAGCAGACCACCCGTTCCTGAAGGAGATGCGGGAATACAAGCAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGCAGAACAGCAGGACATCTTaGGGGAGTGCTTCAAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGVFQTEHSKAGKALGQQNSRTS*GSASRV Trigger: GACCCTTGAAGCACTCCCCAAAGATGTCCTGCTGTT...CTGCTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | CATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGAACAGCAGGACATCTTaGGGGAGTGCTTCAAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLGVFQTEHSKAGKALGQNSRTS*GSASRV Trigger: GACCCTTGAAGCACTCCCCAAAGATGTCCTGCTGTT...CTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS GCA 90 bp | ACTTCCTGCTTGGCTTTCACCACCTCCATCACCACATACAGGTTTTaGTTGTATTCCCGCATCTCCTTCAGGAACGGGTGGTCTGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TSCLAFTTSITTYRF*LYSRISFRNGWSAD Trigger: GTCAGCAGACCACCCGTTCCTGAAGGAGATGCGGGAATACAAGCAAAACCTGTATGTGGTGATGGAGGTGGTGAAAGCCAAGCAGGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | TGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTACTGGACAGTACTGCCTaGTCTCTGAAGCACACACAG | + |
|
Preference number: 5 (lower is better) Translates to: CHHLGVFQTEHSKAGKALLDSTA*SLKHTQ Trigger: CTGTGTGTGCTTCAGAGACAAGGCAGTACTGTCCAG...TAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CCA 90 bp | ACATACAGGTTTTGCTTGTATTCCCGCATCTCCTTCAGGAACGGGTaGTCTGCTGACAGTTTCCTCTCCATGTGCAAGTTCTCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TYRFCLYSRISFRNG*SADSFLSMCKFSRA Trigger: GGCTCTGGAGAACTTGCACATGGAGAGGAAACTGTCAGCAGACCACCCGTTCCTGAAGGAGATGCGGGAATACAAGCAAAACCTGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGAGTGACTTCCTGCTaGGCTTTCACCACCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TAGIKGECHHLGVFQTEHRVTSC*AFTTSI Trigger: GATGGAGGTGGTGAAAGCCAAGCAGGAAGTCACTCT...GTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS GCA 90 bp | GGGGGAAAACATCCTCTTTATCTTGCAGGAAGTTCTGTTCCAAGATaGTCTCAACCAGCTTCAGTTGCACCGGTAGGACCTTGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGKHPLYLAGSSVPR*SQPASVAPVGPCSP Trigger: TGGAGAACAAGGTCCTACCGGTGCAACTGAAGCTGGTTGAGAGCATCTTGGAACAGAACTTCCTGCAAGATAAAGAGGATGTTTTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAGGGCAGCAGTCTTTCTTTAATGTCTaGAAGTCTTCGTGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGVFQTEHSKAGKALGQQSFFNV*KSSCIS Trigger: GGAGATGCACGAAGACTTCAAGACATTAAAGAAAGA...CTGCTGCCCTAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS TCA 90 bp | TGTCAGTACAAATGTATGGAATGCCCCACTCATCTTTCCCATAGATaGTCAGTTGTCTCACTCGATAGGCCAGAACACAGCCCTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CQYKCMECPTHLSHR*SVVSLDRPEHSPWG Trigger: TCCCCAAGGGCTGTGTTCTGGCCTATCGAGTGAGACAACTGATCATCTATGGGAAAGATGAGTGGGGCATTCCATACATTTGTACTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGTGCACCGGTAGGACCTaGTTCTCCAAGGATTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: LKVNATILECFRQSTVRPCTGRT*FSKDFT Trigger: AGTAAAATCCTTGGAGAACAAGGTCCTACCGGTGCA...CGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | TTGTTATCCTGGAACCAGCCTGTAGACAAGGCTGGTCTTGAACTCACTGCCTCTAATTTGGAAATTGCGTaGCTAGCTCGCTTCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSWNQPVDKAGLELTASNLEIA*LARFRV Trigger: CACTCTGAAGCGAGCTAGCAACGCAATTTCCAAATT...AGAGGCAGTGAGTTCAAGACCAGCCTTGTCTACAGGCTGGTTCCAGGATAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS CCA 90 bp | GACAGTACTGCCTTGTCTCTGAAGCACACACAGGGGGTTAAAGGTTaGCATGTTGTCAGTACAAATGTATGGAATGCCCCACTCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DSTALSLKHTQGVKG*HVVSTNVWNAPLIF Trigger: AAAGATGAGTGGGGCATTCCATACATTTGTACTGACAACATGCCAACCTTTAACCCCCTGTGTGTGCTTCAGAGACAAGGCAGTACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | CTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTATGCACCGGTAGGACCTaGTTCTCCAAGGATTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: LGLKVNATILECFRQSTVCTGRT*FSKDFT Trigger: AGTAAAATCCTTGGAGAACAAGGTCCTACCGGTGCA...TACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | TGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGGGAAGGCTTTAAACATCCTCTTTATCTaGCAGGAAGTTCTGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CHHLGVFQTEHSKAGKALNILFI*QEVLFQ Trigger: TTGGAACAGAACTTCCTGCAAGATAAAGAGGATGTT...TAAAGCCTTCCCGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGCCGACATACAGGTTTTGCTaGTATTCCCGCATCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKVNATILECFRQSTVRPTYRFC*YSRISF Trigger: GAAGGAGATGCGGGAATACAAGCAAAACCTGTATGT...CGGCCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS GCA 90 bp | TCTTGCAGGAAGTTCTGTTCCAAGATGCTCTCAACCAGCTTCAGTTaGACCGGTAGGACCTTGTTCTCCAAGGATTTTACTAGAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCRKFCSKMLSTSFS*TGRTLFSKDFTRIF Trigger: GAAGATTCTAGTAAAATCCTTGGAGAACAAGGTCCTACCGGTGCAACTGAAGCTGGTTGAGAGCATCTTGGAACAGAACTTCCTGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGGTTGAGAGAGAATTaGGAAATTGCGTTGCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TAGIKGECHHLGVFQTEHRLREN*EIALLA Trigger: AGCTAGCAACGCAATTTCCAAATTCTCTCTCAACCT...GTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | CTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACATCTTTCTTTAATGTCTaGAAGTCTTCGTGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLGLKVNATILECFRQSTSFFNV*KSSCIS Trigger: GGAGATGCACGAAGACTTCAAGACATTAAAGAAAGA...TGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTGACTGCTGGGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAAACATCCTCTTTATCTaGCAGGAAGTTCTGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LLTAGIKGECHHLGVFQTNILFI*QEVLFQ Trigger: TTGGAACAGAACTTCCTGCAAGATAAAGAGGATGTT...TGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCCCAGCAGTCAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGTGAATGCCACCATCTTGGAGTGTTTCAGACAGAGCACAGTAAGGTTCTTAAAGCTAAAATaGCCAAGGAGTGTTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: GLKVNATILECFRQSTVRFLKLK*PRSVGS Trigger: AGATCCAACACTCCTTGGCAATTTTAGCTTTAAGAA...CCTTACTGTGCTCTGTCTGAAACACTCCAAGATGGTGGCATTCACCTTTAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS GCA 72 bp | AGCCTCCTTGTGGTTCACGGATCCCTGAGGGGGAGCTaGCCGGCTCCAGCACATCCAGGAGAGTGTAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SLLVVHGSLRGS*PAPAHPGECSR Trigger: CCGACTACACTCTCCTGGATGTGCTGGAGCCGGGCAGCTCCCCCTCAGGGATCCGTGAACCACAAGGAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017355.12 |
||
| CDS GCA 72 bp | TGCCCGGCTCCAGCACATCCAGGAGAGTGTAGTCGGTaGGCACATAGCGGGCTCCCCAGAACAGTGTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CPAPAHPGECSR*AHSGLPRTVCS Trigger: AGAGCACACTGTTCTGGGGAGCCCGCTATGTGCGCACCGACTACACTCTCCTGGATGTGCTGGAGCCGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS CCA 72 bp | AGGCCGCTTAGTCCCACCAGTGCTTCTGTTAGAATCTaGTCCTCCTCCCCGAGGGAGGAGAGCAGATCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RPLSPTSASVRI*SSSPREESRSG Trigger: ACCTGATCTGCTCTCCTCCCTCGGGGAGGAGGACCAGATTCTAACAGAAGCACTGGTGGGACTAAGCGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CCA 72 bp | GTGTCTGGATTCCACGTGTACTGGGGCCCTGATCTCTaGACTTCCAGGCCGCTTAGTCCCACCAGTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSGFHVYWGPDL*TSRPLSPTSAS Trigger: AGAAGCACTGGTGGGACTAAGCGGCCTGGAAGTCCAGAGATCAGGGCCCCAGTACACGTGGAATCCAGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CAA 72 bp | GCCAGAACACAGCCCTTGGGGATGGTTACAGCCTCCTaGTGGTTCACGGATCCCTGTAGTCCCAGTGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ARTQPLGMVTAS*WFTDPCSPSEG Trigger: TCCCTCACTGGGACTACAGGGATCCGTGAACCACAAGGAGGCTGTAACCATCCCCAAGGGCTGTGTTCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS TCA 72 bp | CCATGTGCAAGTTCTCCAGAGCCGTGGGAGCCACACTaGGCATCTGTACCTCCAGCGTGCTGCTTTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: PCASSPEPWEPH*ASVPPACCFVT Trigger: TGTCACAAAGCAGCACGCTGGAGGTACAGATGCTCAGTGTGGCTCCCACGGCTCTGGAGAACTTGCACATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS CCA 72 bp | GTCTCACTCGATAGGCCAGAACACAGCCCTTGGGGATaGTTACAGCCTCCTTGTGGTTCACGGATCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSLDRPEHSPWG*LQPPCGSRIPE Trigger: CTCAGGGATCCGTGAACCACAAGGAGGCTGTAACCATCCCCAAGGGCTGTGTTCTGGCCTATCGAGTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017355.12 |
||
| CDS CCA 72 bp | AGAACACAGCCCTTGGGGATGGTTACAGCCTCCTTGTaGTTCACGGATCCCTGTAGTCCCAGTGAGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTQPLGMVTASL*FTDPCSPSEGR Trigger: CCTTCCCTCACTGGGACTACAGGGATCCGTGAACCACAAGGAGGCTGTAACCATCCCCAAGGGCTGTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS CCA 72 bp | GTCTCACTCGATAGGCCAGAACACAGCCCTTGGGGATaGTTACAGCCTCCTTGTGGTTCACGGATCCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VSLDRPEHSPWG*LQPPCGSRIPV Trigger: TACAGGGATCCGTGAACCACAAGGAGGCTGTAACCATCCCCAAGGGCTGTGTTCTGGCCTATCGAGTGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS TCA 72 bp | GTATTCCCGCATCTCCTTCAGGAACGGGTGGTCTGCTaGCAGTTTCCTCTCCATGTGCAAGTTCTCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VFPHLLQERVVC*QFPLHVQVLQS Trigger: GCTCTGGAGAACTTGCACATGGAGAGGAAACTGTCAGCAGACCACCCGTTCCTGAAGGAGATGCGGGAATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS CCA 72 bp | TCAGTTGTCTCACTCGATAGGCCAGAACACAGCCCTTaGGGATGGTTACAGCCTCCTTGTGGTTCACGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SVVSLDRPEHSP*GWLQPPCGSRI Trigger: GATCCGTGAACCACAAGGAGGCTGTAACCATCCCCAAGGGCTGTGTTCTGGCCTATCGAGTGAGACAACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CAA 72 bp | TCTTTGGGGAGTGCTTCAAGGGTCACTTCGTGTCCCTaGTCTAGAGCCCCTTCAAGCATCTGCTCAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLGSASRVTSCP*SRAPSSICSRS Trigger: GGACCTTGAGCAGATGCTTGAAGGGGCTCTAGACAAGGGACACGAAGTGACCCTTGAAGCACTCCCCAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CAA 72 bp | ATGGCGTCCATAGCGTCCTTTAACAGCAGGACATCTTaGGGGAGTGCTTCAAGGGTCACTTCGTGTCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MASIASFNSRTS*GSASRVTSCPL Trigger: CAAGGGACACGAAGTGACCCTTGAAGCACTCCCCAAAGATGTCCTGCTGTTAAAGGACGCTATGGACGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CAA 90 bp | TCCTGCTTGGCTTTCACCACCTCCATCACCACATACAGGTTTTGCTaGTATTCCCGCATCTCCTTCAGGAACGGGTGGTCTGCTGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCLAFTTSITTYRFC*YSRISFRNGWSADS Trigger: ACTGTCAGCAGACCACCCGTTCCTGAAGGAGATGCGGGAATACAAGCAAAACCTGTATGTGGTGATGGAGGTGGTGAAAGCCAAGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS CAA 90 bp | GCCTCCTTGTGGTTCACGGATCCCTGTAGTCCCAGTGAGGGAAGGTaGAGAGAGAATTTGGAAATTGCGTTGCTAGCTCGCTTCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASLWFTDPCSPSEGR*RENLEIALLARFRV Trigger: CACTCTGAAGCGAGCTAGCAACGCAATTTCCAAATTCTCTCTCAACCTTCCCTCACTGGGACTACAGGGATCCGTGAACCACAAGGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS GCA 72 bp | ACTTCGTGTCCCTTGTCTAGAGCCCCTTCAAGCATCTaGTCAAGGTCCTGGAGCTCTTTCTTCTTTCCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSCPLSRAPSSI*SRSWSSFFFPR Trigger: CCTAGGAAAGAAGAAAGAGCTCCAGGACCTTGAGCAGATGCTTGAAGGGGCTCTAGACAAGGGACACGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CCA 72 bp | TTGTCTAGAGCCCCTTCAAGCATCTGCTCAAGGTCCTaGAGCTCTTTCTTCTTTCCTAGGAGATGGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRAPSSICSRS*SSFFFPRRWLR Trigger: CCTCAGCCATCTCCTAGGAAAGAAGAAAGAGCTCCAGGACCTTGAGCAGATGCTTGAAGGGGCTCTAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CAA 72 bp | TGGAATGCCCCACTCATCTTTCCCATAGATGATCAGTaGTCTCACTCGATAGGCCAGAACACAGCCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WNAPLIFPIDDQ*SHSIGQNTALG Trigger: CCCAAGGGCTGTGTTCTGGCCTATCGAGTGAGACAACTGATCATCTATGGGAAAGATGAGTGGGGCATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CAA 72 bp | GTGCATCTCCCCAGATATCATCTGGACAGTACTGCCTaGTCTCTGAAGCACACACAGGGGGTTAAAGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VHLPRYHLDSTA*SLKHTQGVKGW Trigger: CCAACCTTTAACCCCCTGTGTGTGCTTCAGAGACAAGGCAGTACTGTCCAGATGATATCTGGGGAGATGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CAA 90 bp | GGAGGAGAGCAGATCAGGTCGCAGGGGGAAAACATCCTCTTTATCTaGCAGGAAGTTCTGTTCCAAGATGCTCTCAACCAGCTTCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGEQIRSQGENILFI*QEVLFQDALNQLQL Trigger: CAACTGAAGCTGGTTGAGAGCATCTTGGAACAGAACTTCCTGCAAGATAAAGAGGATGTTTTCCCCCTGCGACCTGATCTGCTCTCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
||
| CDS CAA 90 bp | TTCACGGATCCCTGTAGTCCCAGTGAGGGAAGGTTGAGAGAGAATTaGGAAATTGCGTTGCTAGCTCGCTTCAGAGTGACTTCCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FTDPCSPSEGRLREN*EIALLARFRVTSCL Trigger: CAAGCAGGAAGTCACTCTGAAGCGAGCTAGCAACGCAATTTCCAAATTCTCTCTCAACCTTCCCTCACTGGGACTACAGGGATCCGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
||
| CDS TCA 72 bp | TCCCCAGATATCATCTGGACAGTACTGCCTTGTCTCTaGAGCACACACAGGGGGTTAAAGGTTGGCATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPDIIWTVLPCL*STHRGLKVGML Trigger: CAACATGCCAACCTTTAACCCCCTGTGTGTGCTTCAGAGACAAGGCAGTACTGTCCAGATGATATCTGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS CCA 72 bp | TTTTGCTTGTATTCCCGCATCTCCTTCAGGAACGGGTaGTCTGCTGACAGTTTCCTCTCCATGTGCAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: FCLYSRISFRNG*SADSFLSMCKF Trigger: GAACTTGCACATGGAGAGGAAACTGTCAGCAGACCACCCGTTCCTGAAGGAGATGCGGGAATACAAGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS CAA 72 bp | CCCTGTAGTCCCAGTGAGGGAAGGTTGAGAGAGAATTaGGAAATTGCGTTGCTAGCTCGCTTCAGAGTGACT | + |
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Preference number: 6 (lower is better) Translates to: PCSPSEGRLREN*EIALLARFRVT Trigger: AGTCACTCTGAAGCGAGCTAGCAACGCAATTTCCAAATTCTCTCTCAACCTTCCCTCACTGGGACTACAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS CCA 72 bp | GCCTTGTCTCTGAAGCACACACAGGGGGTTAAAGGTTaGCATGTTGTCAGTACAAATGTATGGAATGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: ALSLKHTQGVKG*HVVSTNVWNAP Trigger: TGGGGCATTCCATACATTTGTACTGACAACATGCCAACCTTTAACCCCCTGTGTGTGCTTCAGAGACAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS CAA 72 bp | AGTGAGGGAAGGTTGAGAGAGAATTTGGAAATTGCGTaGCTAGCTCGCTTCAGAGTGACTTCCTGCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SEGRLRENLEIA*LARFRVTSCLA Trigger: AGCCAAGCAGGAAGTCACTCTGAAGCGAGCTAGCAACGCAATTTCCAAATTCTCTCTCAACCTTCCCTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS CAA 90 bp | ACAAATGTATGGAATGCCCCACTCATCTTTCCCATAGATGATCAGTaGTCTCACTCGATAGGCCAGAACACAGCCCTTGGGGATGGTTAC | + |
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Preference number: 6 (lower is better) Translates to: TNVWNAPLIFPIDDQ*SHSIGQNTALGDGY Trigger: GTAACCATCCCCAAGGGCTGTGTTCTGGCCTATCGAGTGAGACAACTGATCATCTATGGGAAAGATGAGTGGGGCATTCCATACATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS CAA 90 bp | AATTTGGAAATTGCGTTGCTAGCTCGCTTCAGAGTGACTTCCTGCTaGGCTTTCACCACCTCCATCACCACATACAGGTTTTGCTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: NLEIALLARFRVTSC*AFTTSITTYRFCLY Trigger: ATACAAGCAAAACCTGTATGTGGTGATGGAGGTGGTGAAAGCCAAGCAGGAAGTCACTCTGAAGCGAGCTAGCAACGCAATTTCCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093938.10 |
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| CDS TCA 72 bp | AAATGTATGGAATGCCCCACTCATCTTTCCCATAGATaGTCAGTTGTCTCACTCGATAGGCCAGAACACAGC | + |
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Preference number: 6 (lower is better) Translates to: KCMECPTHLSHR*SVVSLDRPEHS Trigger: GCTGTGTTCTGGCCTATCGAGTGAGACAACTGATCATCTATGGGAAAGATGAGTGGGGCATTCCATACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS CCA 72 bp | GGGGTTAAAGGTTGGCATGTTGTCAGTACAAATGTATaGAATGCCCCACTCATCTTTCCCATAGATGATCAG | + |
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Preference number: 6 (lower is better) Translates to: GVKGWHVVSTNV*NAPLIFPIDDQ Trigger: CTGATCATCTATGGGAAAGATGAGTGGGGCATTCCATACATTTGTACTGACAACATGCCAACCTTTAACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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| CDS TCA 72 bp | CTTGAGTCTCTTGCTGAACCTCTTTCTTTAATGTCTTaGAGTCTTCGTGCATCTCCCCAGATATCATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LESLAEPLSLMS*SLRASPQISSG Trigger: TCCAGATGATATCTGGGGAGATGCACGAAGACTTCAAGACATTAAAGAAAGAGGTTCAGCAAGAGACTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017355.12 ENSMUST00000093938.10 |
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