Pregenerated sensors for GSAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039934Ensembl transcript IDs: ENSMUST00000036031.13, ENSMUST00000195969.5, ENSMUST00000198014.5, ENSMUST00000198071.5, ENSMUST00000198930.2, ENSMUST00000198937.2
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCAGTGGTCTACAGGAAGCCAAGGACAGCAGTTCCTTGAGAGTTaGCCACACAGGCAGCCAGCCAGGTCCATGATAGCCAGATCATAC | + |
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Preference number: 1 (lower is better) Translates to: TQWSTGSQGQQFLES*PHRQPARSMIARSY Trigger: GTATGATCTGGCTATCATGGACCTGGCTGGCTGCCTGTGTGGTCAACTCTCAAGGAACTGCTGTCCTTGGCTTCCTGTAGACCACTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR CCA 90 bp | TTTGTATTAGATTCTTTAGTGCAACAGAACCAGCTCCAGGCCTACTaGGCCACCAAGGAGGGCACTGTTCCTGCCGCAGCACACGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: FVLDSLVQQNQLQAY*ATKEGTVPAAAHGL Trigger: AAGGCCGTGTGCTGCGGCAGGAACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAAGAATCTAATACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR GCA 90 bp | ATGAGAAAGGACCGAACGAACACCTCATCAGGTGTCAGGGGCCTCTaGCTAGTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGG | + |
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Preference number: 1 (lower is better) Translates to: MRKDRTNTSSGVRGL*LVTLTGSRCLMQIR Trigger: CCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGACTAGGCAGAGGCCCCTGACACCTGATGAGGTGTTCGTTCGGTCCTTTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR CCA 90 bp | ATGATATTGGAACTCATGGGGTGGTCCCAAAGCCGGCAGACCTTCTaGCCAATAAGCGGAGGGAGCCGGACAATGATGCTGAATTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: MILELMGWSQSRQTF*PISGGSRTMMLNFS Trigger: ACTGAAATTCAGCATCATTGTCCGGCTCCCTCCGCTTATTGGCCAGAAGGTCTGCCGGCTTTGGGACCACCCCATGAGTTCCAATATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR GCA 90 bp | GATCGTGTGCAGAGAGTGGAAACCAAGCCCATGAGCAGCCTCTGGTaGCGGTCTTCCTCTTGTAAGAATGGTATTAATCTTGGCTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: DRVQRVETKPMSSLW*RSSSCKNGINLGSS Trigger: ACTGGAGCCAAGATTAATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGGTTTCCACTCTCTGCACACGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| 3UTR CCA 90 bp | AAGGATCGTGTGCAGAGAGTGGAAACCAAGCCCATGAGCAGCCTCTaGTGCCGGTCTTCCTCTTGTAAGAATGGTATTAATCTTGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: KDRVQRVETKPMSSL*CRSSSCKNGINLGS Trigger: GGAGCCAAGATTAATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGGTTTCCACTCTCTGCACACGATCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| 3UTR TCA 90 bp | AGCTCCAGCAATCTTCTCACCTGTTCTTCCGGGAAACCTGGGTCTTaGCTACAGGATAGTATACAGTGCAGTGCAGCCATTCTCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: SSSNLLTCSSGKPGS*LQDSIQCSAAILSQ Trigger: CTGTGAGAGAATGGCTGCACTGCACTGTATACTATCCTGTAGTCAAGACCCAGGTTTCCCGGAAGAACAGGTGAGAAGATTGCTGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
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| 3UTR CCA 90 bp | AAATCGTCCGTCTGCACGTCCACTTTCATAAGCCCAAAAGCATGGTaGTGTGTTTCAGAGCAGCTTCCTCTACAAATTCTGCGTCCACAT | + |
|
Preference number: 1 (lower is better) Translates to: KSSVCTSTFISPKAW*CVSEQLPLQILRPH Trigger: ATGTGGACGCAGAATTTGTAGAGGAAGCTGCTCTGAAACACACCACCATGCTTTTGGGCTTATGAAAGTGGACGTGCAGACGGACGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR CCA 90 bp | TTGAAATCGTCCGTCTGCACGTCCACTTTCATAAGCCCAAAAGCATaGTGGTGTGTTTCAGAGCAGCTTCCTCTACAAATTCTGCGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: LKSSVCTSTFISPKA*WCVSEQLPLQILRP Trigger: TGGACGCAGAATTTGTAGAGGAAGCTGCTCTGAAACACACCACCATGCTTTTGGGCTTATGAAAGTGGACGTGCAGACGGACGATTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR TCA 90 bp | CTGTATGGACAAATGGTTATTTGTCCAGTTCCTCCAAACTGGACGTaGCAGGCTTTGCTTCCTCAGTTTCAGGTTCTCCTGAGATGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LYGQMVICPVPPNWT*QALLPQFQVLLRCS Trigger: AGAGCATCTCAGGAGAACCTGAAACTGAGGAAGCAAAGCCTGTCACGTCCAGTTTGGAGGAACTGGACAAATAACCATTTGTCCATACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR CCA 90 bp | CTTTGCCCAGTACCCCTTCAAGCCGTAGACCTTCATAAGAGGCAATaGGAGTTCCTCTGTCGTAAACTTTATTCCGGGAATTTCTGTGTT | + |
|
Preference number: 1 (lower is better) Translates to: LCPVPLQAVDLHKRQ*EFLCRKLYSGNFCV Trigger: AACACAGAAATTCCCGGAATAAAGTTTACGACAGAGGAACTCCCATTGCCTCTTATGAAGGTCTACGGCTTGAAGGGGTACTGGGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| 3UTR CCA 90 bp | AGTTCAGAGGCAGAAATTCTACCGGAAATGATGATTTGTCAATCATaGAGTTCCGAGGCTCTTTCCTGTAGTTTTTCAGCAGCCGGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: SSEAEILPEMMICQS*SSEALSCSFSAAGP Trigger: TGGCCCGGCTGCTGAAAAACTACAGGAAAGAGCCTCGGAACTCCATGATTGACAAATCATCATTTCCGGTAGAATTTCTGCCTCTGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR TCA 90 bp | AGGGAGCCGGACAATGATGCTGAATTTCAGTTGTTCATTTTTCTCTaGATTGTCCAGATCTTTCATAAGCCTCGTGACCGCGGTCTCAGT | + |
|
Preference number: 1 (lower is better) Translates to: REPDNDAEFQLFIFL*IVQIFHKPRDRGLS Trigger: ACTGAGACCGCGGTCACGAGGCTTATGAAAGATCTGGACAATTCAGAGAAAAATGAACAACTGAAATTCAGCATCATTGTCCGGCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR GCA 90 bp | GTGAGGTTTTGTATACTTAATGTACTCAAGGTTGGAGTTCAGCTTTaGCCAGTACCCCTTCAAGCCGTAGACCTTCATAAGAGGCAATGG | + |
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Preference number: 1 (lower is better) Translates to: VRFCILNVLKVGVQL*PVPLQAVDLHKRQW Trigger: CCATTGCCTCTTATGAAGGTCTACGGCTTGAAGGGGTACTGGGCAAAGCTGAACTCCAACCTTGAGTACATTAAGTATACAAAACCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| 3UTR GCA 90 bp | GTGGAGCAGGATGTCACAGCTGTCATCACACGACTTAGAAGAGCATaGCACTTAAATGTTAAGATTTGCTTCTTTGGGGGCTTCTCCATT | + |
|
Preference number: 1 (lower is better) Translates to: VEQDVTAVITRLRRA*HLNVKICFFGGFSI Trigger: AATGGAGAAGCCCCCAAAGAAGCAAATCTTAACATTTAAGTGGCATGCTCTTCTAAGTCGTGTGATGACAGCTGTGACATCCTGCTCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
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| 3UTR GCA 90 bp | CAAAAGCATGGTGGTGTGTTTCAGAGCAGCTTCCTCTACAAATTCTaGGTCCACATTGTCATGTCCTTCAAAGCCATACAGTGCTTGGTT | + |
|
Preference number: 1 (lower is better) Translates to: QKHGGVFQSSFLYKF*VHIVMSFKAIQCLV Trigger: AACCAAGCACTGTATGGCTTTGAAGGACATGACAATGTGGACGCAGAATTTGTAGAGGAAGCTGCTCTGAAACACACCACCATGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR TCA 90 bp | CATACAGTGCTTGGTTGGAGGACTCCAGGCCCATCAGAATTTCGATaGAGTAGTTCAGAGGCAGAAATTCTACCGGAAATGATGATTTGT | + |
|
Preference number: 1 (lower is better) Translates to: HTVLGWRTPGPSEFR*SSSEAEILPEMMIC Trigger: ACAAATCATCATTTCCGGTAGAATTTCTGCCTCTGAACTACTTCATCGAAATTCTGATGGGCCTGGAGTCCTCCAACCAAGCACTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR GCA 90 bp | TCTTGGCTCCAGTGTCCTCGTTTCCATGCTAGCAATCACCTTCATTaGGTTTTCAAGAATGTTCCTCACGTACATTGTGGATCTCCTTTT | + |
|
Preference number: 1 (lower is better) Translates to: SWLQCPRFHASNHLH*VFKNVPHVHCGSPF Trigger: AAAAGGAGATCCACAATGTACGTGAGGAACATTCTTGAAAACGCAATGAAGGTGATTGCTAGCATGGAAACGAGGACACTGGAGCCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195969.5 |
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| 3UTR GCA 90 bp | AGGCAGCCAGCCAGGTCCATGATAGCCAGATCATACTTACTTCATTaGGTTTTCAAGAATGTTCCTCACGTACATTGTGGATCTCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: RQPARSMIARSYLLH*VFKNVPHVHCGSPF Trigger: AAAAGGAGATCCACAATGTACGTGAGGAACATTCTTGAAAACGCAATGAAGTAAGTATGATCTGGCTATCATGGACCTGGCTGGCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR TCA 90 bp | CTGCATACACACTCCAATAGGAGGAAGCAATTAGAAATTCTTGAATaGGGTCAAATGAATGGCAAGCAGAGACATGCTCCGAAATCCACT | + |
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Preference number: 1 (lower is better) Translates to: LHTHSNRRKQLEILE*GQMNGKQRHAPKST Trigger: AGTGGATTTCGGAGCATGTCTCTGCTTGCCATTCATTTGACCTCATTCAAGAATTTCTAATTGCTTCCTCCTATTGGAGTGTGTATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| 3UTR CCA 90 bp | TTAAACTGGAACTCTGAACACACAGACTTAGAAGGAAAGAAGCCCTaGCTTTCATCAAGTTCTCTTCTTAATTCAATGCTATTGCTTCAG | + |
|
Preference number: 1 (lower is better) Translates to: LNWNSEHTDLEGKKP*LSSSSLLNSMLLLQ Trigger: CTGAAGCAATAGCATTGAATTAAGAAGAGAACTTGATGAAAGCCAGGGCTTCTTTCCTTCTAAGTCTGTGTGTTCAGAGTTCCAGTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTGCAACAGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTCGCAGCACACGGCCTTaGACTTGTTCTTTCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: FSATEPAPGLLGHQGGHCRSTRP*TCSFLL Trigger: CAAGAGGAAAGAACAAGTTCAAGGCCGTGTGCTGCG...ACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCCTCTGCCTAGTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGCTATGTCCTTTCCAGTaGCCGCCTGGCTCTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: RGLCLVTLTGSRCLMQIRLCPFQ*PPGSHC Trigger: ACAGTGAGAGCCAGGCGGTCACTGGAAAGGACATAG...CCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGACTAGGCAGAGGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGGGAGATGAGAAAGGACCGAACGAACACCTCATCAGGTGTCAGGGGCCTAGTTTCAGGTTCTCCTaGGATGCTCTTCCCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: QEGDEKGPNEHLIRCQGPSFRFS*DALPST Trigger: AGTGCTGGGAAGAGCATCTCAGGAGAACCTGAAACT...AGGCCCCTGACACCTGATGAGGTGTTCGTTCGGTCCTTTCTCATCTCCCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | CCCGTTTTTAAGCTCCAGCAATCTTCTCACCTGTTCTTCCGGGAAACCTGGGTCGCCGTCTGTGACCTGTaGGTCAGCACCGTTTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: PVFKLQQSSHLFFRETWVAVCDL*VSTVCD Trigger: GTCACAAACGGTGCTGACTCACAGGTCACAGACGGC...GACCCAGGTTTCCCGGAAGAACAGGTGAGAAGATTGCTGGAGCTTAAAAACGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
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| 3UTR-3UTR TCA 90 bp | GTACCCCTTCAAGCCGTAGACCTTCATAAGAGGCAATGGGAGTTCCTCTGTCGTGTGAACAGGAACCCATaGGGACAGAGAAGCAGAACG | + |
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Preference number: 2 (lower is better) Translates to: VPLQAVDLHKRQWEFLCRVNRNP*GQRSRT Trigger: CGTTCTGCTTCTCTGTCCTCATGGGTTCCTGTTCAC...ACGACAGAGGAACTCCCATTGCCTCTTATGAAGGTCTACGGCTTGAAGGGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | GATCGTGTGCAGAGAGTGGAAACCAAGCCCATGAGCAGCCTCTGGTGCCGGTCTAGAACACTGAATATGTaGTTTCTTCCCGTGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: DRVQRVETKPMSSLWCRSRTLNM*FLPVSQ Trigger: CTGACTCACGGGAAGAAATCACATATTCAGTGTTCT...AGACCGGCACCAGAGGCTGCTCATGGGCTTGGTTTCCACTCTCTGCACACGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| 3UTR CAA 90 bp | GGCAGGGACTGCAAAGGACTTGGAGGTAGCACAGCAGCTATTTTGTaGTTTCCTGTCAGAAACAGACTGTGGCAGACCAAGTCTGGATGC | + |
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Preference number: 2 (lower is better) Translates to: GRDCKGLGGSTAAIL*FPVRNRLWQTKSGC Trigger: GCATCCAGACTTGGTCTGCCACAGTCTGTTTCTGACAGGAAACAACAAAATAGCTGCTGTGCTACCTCCAAGTCCTTTGCAGTCCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
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| 3UTR CAA 90 bp | AATAGCAGTCCAGAACCAGGGACCCCGGCAGGGACTGCAAAGGACTaGGAGGTAGCACAGCAGCTATTTTGTTGTTTCCTGTCAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: NSSPEPGTPAGTAKD*EVAQQLFCCFLSET Trigger: TGTTTCTGACAGGAAACAACAAAATAGCTGCTGTGCTACCTCCAAGTCCTTTGCAGTCCCTGCCGGGGTCCCTGGTTCTGGACTGCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGACCGCCTGGCTCTCACTGTTCTAGGCATTGTCCCCTGTGTTTGTATTTGTTTACTGGCTGCTTaGACTGAGAGAAGGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSDRLALTVLGIVPCVCICLLAA*TERRSS Trigger: GCTGCTCCTTCTCTCAGTTCAAGCAGCCAGTAAACA...AATACAAACACAGGGGACAATGCCTAGAACAGTGAGAGCCAGGCGGTCACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | ACTGGTCAAGGGTTACTCTATAGACCTTTCCAGAATAGCAGTCCAGAACCAGGGACCGTTTGTGACCTGTaGGTCAGCACTTCCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TGQGLLYRPFQNSSPEPGTVCDL*VSTSRS Trigger: GCTCCTGGAAGTGCTGACTCACAGGTCACAAACGGT...CCCTGGTTCTGGACTGCTATTCTGGAAAGGTCTATAGAGTAACCCTTGACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGCACTCCGTTATCAATGTAGTGCAGAAGGCTGTACAAAGGGAGGCAGTGGAACCATAACCTTCCAGTaGGCATGGAAACCCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: AALRYQCSAEGCTKGGSGTITFQ*AWKPCQ Trigger: TTGGCAGGGTTTCCATGCTCACTGGAAGGTTATGGT...TCCACTGCCTCCCTTTGTACAGCCTTCTGCACTACATTGATAACGGAGTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | ACCACAAAGGCAAAGGCTGGTCTAAGCCCTGTATGGACAAATGGTTATTTGTCCCAGTTCCTTGAGAGTTaGCCACACAGGCAGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TTKAKAGLSPVWTNGYLSQFLES*PHRQPA Trigger: GGCTGGCTGCCTGTGTGGTCAACTCTCAAGGAACTG...GGACAAATAACCATTTGTCCATACAGGGCTTAGACCAGCCTTTGCCTTTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACTCCGTTATCAATGTAGTGCAGAAGGCTGTACAAAGGGAGGCAGTGGAGTCAGAAACAGACTGTaGCAGACCAAGTCTGGATGC | + |
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Preference number: 2 (lower is better) Translates to: AALRYQCSAEGCTKGGSGVRNRL*QTKSGC Trigger: GCATCCAGACTTGGTCTGCCACAGTCTGTTTCTGAC...TCCACTGCCTCCCTTTGTACAGCCTTCTGCACTACATTGATAACGGAGTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGCTGGCCTTGAACTGAGAGATTCACCTGCCTCTGGAATTAATTCTATAGTGATCCAGGCCAGGTaGAGCAGGATGTCACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: HQAGLELRDSPASGINSIVIQAR*SRMSQL Trigger: CAGCTGTGACATCCTGCTCCACCTGGCCTGGATCAC...TATAGAATTAATTCCAGAGGCAGGTGAATCTCTCAGTTCAAGGCCAGCCTGGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGAGTATTGTAGGAGCATGCCCATGTCGTCCAGCTCTGCATACACACTCCTTCCAGGAGCTGCAGTaGAGATCTTTCTGTATCCTT | + |
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Preference number: 2 (lower is better) Translates to: QRSIVGACPCRPALHTHSFQELQ*RSFCIL Trigger: AAGGATACAGAAAGATCTTCACTGCAGCTCCTGGAA...GGAGTGTGTATGCAGAGCTGGACGACATGGGCATGCTCCTACAATACTCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGCAGCACTCCGTTATCAATGTAGTGCAGAAGGCTGTACAAAGGGAGGCATCAGAGATCAGGTTATaGCATTCCCTCCTCACGACG | + |
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Preference number: 2 (lower is better) Translates to: KQQHSVINVVQKAVQREASEIRL*HSLLTT Trigger: CGTCGTGAGGAGGGAATGGCATAACCTGATCTCTGA...TGCCTCCCTTTGTACAGCCTTCTGCACTACATTGATAACGGAGTGCTGCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| 3UTR CAA 90 bp | GTGGTGTGTTTCAGAGCAGCTTCCTCTACAAATTCTGCGTCCACATaGTCATGTCCTTCAAAGCCATACAGTGCTTGGTTGGAGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: VVCFRAASSTNSAST*SCPSKPYSAWLEDS Trigger: GGAGTCCTCCAACCAAGCACTGTATGGCTTTGAAGGACATGACAATGTGGACGCAGAATTTGTAGAGGAAGCTGCTCTGAAACACACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | AACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTTAACTGGCTGCTTGAACTaGGAGAAGGAGCAGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: NCTEANSSAVYSDLFPILTGCLN*EKEQLP Trigger: AGGCAGCTGCTCCTTCTCTCAGTTCAAGCAGCCAGT...TAAGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | AGAATCATTAAAATCTCGCCATGTGAACAGGAACCCATGAGGACAGAGAAGCAGCTATGTCCTTTCCAGTaGCCGCCTGGCTCTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: RIIKISPCEQEPMRTEKQLCPFQ*PPGSHC Trigger: ACAGTGAGAGCCAGGCGGTCACTGGAAAGGACATAG...CTGCTTCTCTGTCCTCATGGGTTCCTGTTCACATGGCGAGATTTTAATGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | GTATGGACAAATGGTTATTTGTCCAGTTCCTCCAAACTGGACGTGACAGGCTTTTGCTCTTCCCAGCACTaGCCTTTCCTGCCTGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: VWTNGYLSSSSKLDVTGFCSSQH*PFLPVL Trigger: TAGGACAGGCAGGAAAGGTCAGTGCTGGGAAGAGCA...AAAGCCTGTCACGTCCAGTTTGGAGGAACTGGACAAATAACCATTTGTCCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTCCGTTATCAATGTAGTGCAGAAGGCTGTACAAAGGGAGGCAGTGGACAAATATGGCTCTATCTaGGCCACCACAAAGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QHSVINVVQKAVQREAVDKYGSI*ATTKAK Trigger: CTTTGCCTTTGTGGTGGCTCAGATAGAGCCATATTT...GTCCACTGCCTCCCTTTGTACAGCCTTCTGCACTACATTGATAACGGAGTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | AGAACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTGTGAACAGGAACCCATaGGGACAGAGAAGCAGAACG | + |
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Preference number: 2 (lower is better) Translates to: RTVPKPTALQYILTCSQSVNRNP*GQRSRT Trigger: CGTTCTGCTTCTCTGTCCTCATGGGTTCCTGTTCAC...AGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| 3UTR-3UTR TCA 90 bp | ACCCCGGCAGGGACTGCAAAGGACTTGGAGGTAGCACAGCAGCTATTTTGTTGTAGAACACTGAATATGTaGTTTCTTCCCGTGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: TPAGTAKDLEVAQQLFCCRTLNM*FLPVSQ Trigger: CTGACTCACGGGAAGAAATCACATATTCAGTGTTCT...ACAACAAAATAGCTGCTGTGCTACCTCCAAGTCCTTTGCAGTCCCTGCCGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
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| 3UTR-3UTR TCA 90 bp | AACTTTATTCCGGGAATTTCTGTGTTCCAAGTCAGCACAGAGGAGTATTGTAGGGCCGTCTGTGACCTGTaGGTCAGCACCGTTTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: NFIPGISVFQVSTEEYCRAVCDL*VSTVCD Trigger: GTCACAAACGGTGCTGACTCACAGGTCACAGACGGC...CCTACAATACTCCTCTGTGCTGACTTGGAACACAGAAATTCCCGGAATAAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAATGTTCCTCACGTACATTGTGGATCTCCTTTTGCCCGTTCTCTCTTCAGAGGTTGGAGTTCAGCTTTaGCCAGTACCCCTTCAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: RMFLTYIVDLLLPVLSSEVGVQL*PVPLQA Trigger: GGCTTGAAGGGGTACTGGGCAAAGCTGAACTCCAAC...CTCTGAAGAGAGAACGGGCAAAAGGAGATCCACAATGTACGTGAGGAACATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR-3UTR CCA 90 bp | GGCATTGTCCCCTGTGTTTGTATTAGATTCTTTAGTGCAACAGAACCAGCTCCAGCAGCATTGCTGACTTaGTGGCAAGGTTCCGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GIVPCVCIRFFSATEPAPAALLT*WQGSEP Trigger: AGGCTCGGAACCTTGCCACCAAGTCAGCAATGCTGC...TGGAGCTGGTTCTGTTGCACTAAAGAATCTAATACAAACACAGGGGACAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR-3UTR CCA 90 bp | TACTCTATAGACCTTTCCAGAATAGCAGTCCAGAACCAGGGACCCCGGCAGGGACTGTCTCTTGGGAGATaGCTAGAATTTCTAATCACC | + |
|
Preference number: 2 (lower is better) Translates to: YSIDLSRIAVQNQGPRQGLSLGR*LEFLIT Trigger: GGTGATTAGAAATTCTAGCCATCTCCCAAGAGACAG...TCCCTGCCGGGGTCCCTGGTTCTGGACTGCTATTCTGGAAAGGTCTATAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAGAGGCAGAAATTCTACCGGAAATGATGATTTGTCAATCATGGAGTTCCACTGGCTGCTTGAACTaGGAGAAGGAGCAGCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SSEAEILPEMMICQSWSSTGCLN*EKEQLP Trigger: AGGCAGCTGCTCCTTCTCTCAGTTCAAGCAGCCAGT...GGAACTCCATGATTGACAAATCATCATTTCCGGTAGAATTTCTGCCTCTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR TCA 90 bp | CAAACTCCCTGTATGGTTGGTAAAAATGCAGAGAGAAGGCTGATTGCACAGCTTTGTTTACTGGCTGCTTaGACTGAGAGAAGGAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QTPCMVGKNAERRLIAQLCLLAA*TERRSS Trigger: GCTGCTCCTTCTCTCAGTTCAAGCAGCCAGTAAACA...AAGCTGTGCAATCAGCCTTCTCTCTGCATTTTTACCAACCATACAGGGAGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR TCA 90 bp | AACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTTAAGTTTCAGGTTCTCCTaGGATGCTCTTCCCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: NCTEANSSAVYSDLFPILSFRFS*DALPST Trigger: AGTGCTGGGAAGAGCATCTCAGGAGAACCTGAAACT...TAAGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCACTCCGTTATCAATGTAGTGCAGAAGGCTGTACAAAGGGAGGCAGTGGACACAGCAAAGATTGCTaGAAATACGGTGGATTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: AALRYQCSAEGCTKGGSGHSKDC*KYGGFH Trigger: ATGAAATCCACCGTATTTTCAGCAATCTTTGCTGTG...TCCACTGCCTCCCTTTGTACAGCCTTCTGCACTACATTGATAACGGAGTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCCGTTATCAATGTAGTGCAGAAGGCTGTACAAAGGGAGGCAGTGGACCCAGCAATCACCTTCATTaGGTTTTCAAGAATGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ALRYQCSAEGCTKGGSGPSNHLH*VFKNVP Trigger: AGGAACATTCTTGAAAACGCAATGAAGGTGATTGCT...GGGTCCACTGCCTCCCTTTGTACAGCCTTCTGCACTACATTGATAACGGAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195969.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAATCATTAAAATCTCGCCATGTGAACAGGAACCCATGAGGACAGAGAAGCAGCACAAAGGCAAAGGCTaGTCTAAGCCCTGTATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RIIKISPCEQEPMRTEKQHKGKG*SKPCMD Trigger: GTCCATACAGGGCTTAGACCAGCCTTTGCCTTTGTG...CTGCTTCTCTGTCCTCATGGGTTCCTGTTCACATGGCGAGATTTTAATGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR-3UTR TCA 90 bp | AAAATAAGAGCAAGTTCCACCAACCCAGCCCACCAACAATTAAAGCAAATCAAATGCTCTTCCCAGCACTaGCCTTTCCTGCCTGTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: KIRASSTNPAHQQLKQIKCSSQH*PFLPVL Trigger: TAGGACAGGCAGGAAAGGTCAGTGCTGGGAAGAGCA...TTTGATTTGCTTTAATTGTTGGTGGGCTGGGTTGGTGGAACTTGCTCTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCCGTTATCAATGTAGTGCAGAAGGCTGTACAAAGGGAGGCAGTGGACCCGTTAAAACTTTCATCTaGCCTAAACTGGATGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: ALRYQCSAEGCTKGGSGPVKTFI*PKLDAF Trigger: AAATGCATCCAGTTTAGGGCAGATGAAAGTTTTAAC...GGGTCCACTGCCTCCCTTTGTACAGCCTTCTGCACTACATTGATAACGGAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR-3UTR TCA 90 bp | GTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGCTATACCCAAAACTTAAATATGGCTCTATCTaGGCCACCACAAAGGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VTLTGSRCLMQIRLYPKLKYGSI*ATTKAK Trigger: CTTTGCCTTTGTGGTGGCTCAGATAGAGCCATATTT...AAGTTTTGGGTATAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR-3UTR GCA 90 bp | AACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTTACTGACGGGCTCAAGATaGCTTATGCAAATAAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: NCTEANSSAVYSDLFPILLTGSR*LMQIRL Trigger: TAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAG...TAAGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCACAAAGGCAAAGGCTGGTCTAAGCCCTGTATGGACAAATGGTTATTTGTCCGCCTGGCTGACTATTTaGAGCAAAAGGGAAATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TTKAKAGLSPVWTNGYLSAWLTI*SKREIL Trigger: TAGAATTTCCCTTTTGCTCCAAATAGTCAGCCAGGC...GGACAAATAACCATTTGTCCATACAGGGCTTAGACCAGCCTTTGCCTTTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR-3UTR CCA 90 bp | AACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTTAATAAGCCCAAAAGCATaGTGGTGTGTTTCAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: NCTEANSSAVYSDLFPILISPKA*WCVSEQ Trigger: CTGCTCTGAAACACACCACCATGCTTTTGGGCTTAT...TAAGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR GCA 90 bp | ACAAGTATGACTGGTCAAGGGTTACTCTATAGACCTTTCCAGAATAGCAGTCCACAGGATAGTATACAGTaGAGTGCAGCCATTCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TSMTGQGLLYRPFQNSSPQDSIQ*SAAILS Trigger: TGAGAGAATGGCTGCACTGCACTGTATACTATCCTG...TGGACTGCTATTCTGGAAAGGTCTATAGAGTAACCCTTGACCAGTCATACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTTGTGATAGTGCAAGTGAGGTTTTGTATACTTAATGTACTCAAGGTTGGACACAAAGGCAAAGGCTaGTCTAAGCCCTGTATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: AVVIVQVRFCILNVLKVGHKGKG*SKPCMD Trigger: GTCCATACAGGGCTTAGACCAGCCTTTGCCTTTGTG...TCCAACCTTGAGTACATTAAGTATACAAAACCTCACTTGCACTATCACAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR CAA 90 bp | GGTAAAAATGCAGAGAGAAGGCTGATTGCACAGCTTCTCACGGTCTaGACGATAGTCATATCCAAAGTTGACAAGTTTAAATCTCAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GKNAERRLIAQLLTV*TIVISKVDKFKSQA Trigger: GGCTTGAGATTTAAACTTGTCAACTTTGGATATGACTATCGTCAAGACCGTGAGAAGCTGTGCAATCAGCCTTCTCTCTGCATTTTTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| 3UTR-3UTR TCA 90 bp | GGCATTGTCCCCTGTGTTTGTATTAGATTCTTTAGTGCAACAGAACCAGCTCCACACAGCAAAGATTGCTaGAAATACGGTGGATTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GIVPCVCIRFFSATEPAPHSKDC*KYGGFH Trigger: ATGAAATCCACCGTATTTTCAGCAATCTTTGCTGTG...TGGAGCTGGTTCTGTTGCACTAAAGAATCTAATACAAACACAGGGGACAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR-3UTR TCA 90 bp | GATGTCACAGCTGTCATCACACGACTTAGAAGAGCATGCCACTTAAATGTTAAGGCAAAAACCAACTTCTaGTCGTCTCAAAGCACTAAG | + |
|
Preference number: 2 (lower is better) Translates to: DVTAVITRLRRACHLNVKAKTNF*SSQSTK Trigger: CTTAGTGCTTTGAGACGATCAGAAGTTGGTTTTTGC...CTTAACATTTAAGTGGCATGCTCTTCTAAGTCGTGTGATGACAGCTGTGACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTAGGCATTGTCCCCTGTGTTTGTATTAGATTCTTTAGTGCAACAGAACCACTCTTGGCTGTTTACTaGCTGCTTGAACTGAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VLGIVPCVCIRFFSATEPLLAVY*LLELRE Trigger: TTCTCTCAGTTCAAGCAGCCAGTAAACAGCCAAGAG...TGGTTCTGTTGCACTAAAGAATCTAATACAAACACAGGGGACAATGCCTAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTTGTGATAGTGCAAGTGAGGTTTTGTATACTTAATGTACTCAAGGTTGGACTGACGGGCTCAAGATaGCTTATGCAAATAAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: AVVIVQVRFCILNVLKVGLTGSR*LMQIRL Trigger: TAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAG...TCCAACCTTGAGTACATTAAGTATACAAAACCTCACTTGCACTATCACAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR GCA 90 bp | AACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTTATCTACCCAGAGAATATaGTTTCAAAATAAGAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: NCTEANSSAVYSDLFPILSTQRI*FQNKSK Trigger: CTTGCTCTTATTTTGAAAGCATATTCTCTGGGTAGA...TAAGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGTCTCCAGTACAGAGTAATTTGTAACACAAGCAATATGAACAGACAGAAACTCTTGGCTGTTTACTaGCTGCTTGAACTGAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CCLQYRVICNTSNMNRQKLLAVY*LLELRE Trigger: TTCTCTCAGTTCAAGCAGCCAGTAAACAGCCAAGAG...TTTCTGTCTGTTCATATTGCTTGTGTTACAAATTACTCTGTACTGGAGACAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR CAA 90 bp | TCAAGTTCTCTTCTTAATTCAATGCTATTGCTTCAGCTGAATTCTTaGAGATCTCTTCATATAGTATGCAACGTCATACAGCATGCCCCG | + |
|
Preference number: 2 (lower is better) Translates to: SSSLLNSMLLLQLNS*RSLHIVCNVIQHAP Trigger: CGGGGCATGCTGTATGACGTTGCATACTATATGAAGAGATCTCAAAGAATTCAGCTGAAGCAATAGCATTGAATTAAGAAGAGAACTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTTTATTCCGGGAATTTCTGTGTTCCAAGTCAGCACAGAGGAGTATTGTAGGGTTAAAACTTTCATCTaGCCTAAACTGGATGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: NFIPGISVFQVSTEEYCRVKTFI*PKLDAF Trigger: AAATGCATCCAGTTTAGGGCAGATGAAAGTTTTAAC...CCTACAATACTCCTCTGTGCTGACTTGGAACACAGAAATTCCCGGAATAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR CAA 90 bp | CCAGCCCACCAACAATTAAAGCAAATCAAACTACTATGTCTTTCATaGCCAGTACTCACTTATAAAAGCCGACTTTACCATTATCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: PAHQQLKQIKLLCLS*PVLTYKSRLYHYPS Trigger: TGATGGATAATGGTAAAGTCGGCTTTTATAAGTGAGTACTGGCAATGAAAGACATAGTAGTTTGATTTGCTTTAATTGTTGGTGGGCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR CAA 90 bp | AAGAAGCCCTGGCTTTCATCAAGTTCTCTTCTTAATTCAATGCTATaGCTTCAGCTGAATTCTTTGAGATCTCTTCATATAGTATGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: KKPWLSSSSLLNSML*LQLNSLRSLHIVCN Trigger: GTTGCATACTATATGAAGAGATCTCAAAGAATTCAGCTGAAGCAATAGCATTGAATTAAGAAGAGAACTTGATGAAAGCCAGGGCTTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| 3UTR CCA 72 bp | GATTCTTTAGTGCAACAGAACCAGCTCCAGGCCTACTaGGCCACCAAGGAGGGCACTGTTCCTGCCGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DSLVQQNQLQAY*ATKEGTVPAAA Trigger: TGCTGCGGCAGGAACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAAGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | CCAGTGGTCTACAGGAAGCCAAGGACAGCAGTTCCTTaGGAGTTGACCACACAGGCAGCCAGCCAGGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PVVYRKPRTAVP*ELTTQAASQVH Trigger: ATGGACCTGGCTGGCTGCCTGTGTGGTCAACTCTCAAGGAACTGCTGTCCTTGGCTTCCTGTAGACCACTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | CAAGGAGGGCACTGTTCCTGCCGCAGCACACGGCCTTaGACTTGTTCTTTCCTCTTGGCTGTTTACTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QGGHCSCRSTRP*TCSFLLAVYWL Trigger: CAGCCAGTAAACAGCCAAGAGGAAAGAACAAGTTCAAGGCCGTGTGCTGCGGCAGGAACAGTGCCCTCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | TCTACAGGAAGCCAAGGACAGCAGTTCCTTGAGAGTTaGCCACACAGGCAGCCAGCCAGGTCCATGATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: STGSQGQQFLES*PHRQPARSMIA Trigger: GGCTATCATGGACCTGGCTGGCTGCCTGTGTGGTCAACTCTCAAGGAACTGCTGTCCTTGGCTTCCTGTAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGTGCAACAGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTAGGGAGGTGAAAATATaGAAATCGTCCGTCTGCACG | + |
|
Preference number: 3 (lower is better) Translates to: FSATEPAPGLLGHQGGHCREVKI*KSSVCT Trigger: CGTGCAGACGGACGATTTCAATATTTTCACCTCCCT...ACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | ATAGAAGTGTCTCCCTCTAGACACTCCAGCACCCAGTaGTCTACAGGAAGCCAAGGACAGCAGTTCCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IEVSPSRHSSTQ*STGSQGQQFLE Trigger: CTCAAGGAACTGCTGTCCTTGGCTTCCTGTAGACCACTGGGTGCTGGAGTGTCTAGAGGGAGACACTTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR CAA 90 bp | TCATACAGCATGCCCCGTGTTTCTAGTCCATCTGCTGGTCTCGGGGAAAGCAAGAGGGAGGTGAAAATATaGAAATCGTCCGTCTGCACG | + |
|
Preference number: 3 (lower is better) Translates to: SYSMPRVSSPSAGLGESKREVKI*KSSVCT Trigger: CGTGCAGACGGACGATTTCAATATTTTCACCTCCCT...CTTGCTTTCCCCGAGACCAGCAGATGGACTAGAAACACGGGGCATGCTGTATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| 3UTR CCA 72 bp | ATACAGTGCAGTGCAGCCATTCTCTCACAGTCGAGATaGGCGTTCCATAGGAACCGCAACAAGTATGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: IQCSAAILSQSR*AFHRNRNKYDW Trigger: CCAGTCATACTTGTTGCGGTTCCTATGGAACGCCCATCTCGACTGTGAGAGAATGGCTGCACTGCACTGTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| 3UTR-3UTR CAA 90 bp | GTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGCTATACCCAAAACTTTGCAGCATTGCTGACTaGGTGGCAAGGTTCCGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VTLTGSRCLMQIRLYPKLCSIAD*VARFRA Trigger: GGCTCGGAACCTTGCCACCAAGTCAGCAATGCTGCA...AAGTTTTGGGTATAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR GCA 72 bp | AGGGGCCTCTGCCTAGTCACACTGACGGGCTCAAGATaGCTTATGCAAATAAGGCTATACCCAAAACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RGLCLVTLTGSR*LMQIRLYPKLR Trigger: CCTAAGTTTTGGGTATAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGACTAGGCAGAGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR GCA 72 bp | TGCGTCCACATTGTCATGTCCTTCAAAGCCATACAGTaGTTGGTTGGAGGACTCCAGGCCCATCAGAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: CVHIVMSFKAIQ*LVGGLQAHQNF Trigger: GAAATTCTGATGGGCCTGGAGTCCTCCAACCAAGCACTGTATGGCTTTGAAGGACATGACAATGTGGACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | GTGCAGAGAGTGGAAACCAAGCCCATGAGCAGCCTCTaGTGCCGGTCTTCCTCTTGTAAGAATGGTATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: VQRVETKPMSSL*CRSSSCKNGIN Trigger: ATTAATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGGTTTCCACTCTCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR-3UTR CAA 90 bp | GTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGCTATACCCAAAACTTAAAGCCATACAGTGCTaGGTTGGAGGACTCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VTLTGSRCLMQIRLYPKLKAIQC*VGGLQA Trigger: GGCCTGGAGTCCTCCAACCAAGCACTGTATGGCTTT...AAGTTTTGGGTATAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | GTTCTTTCCTCTTGGCTGTTTACTGGCTGCTTGAACTaGGAGAAGGAGCAGCTGCCTCGGAATAAGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: VLSSWLFTGCLN*EKEQLPRNKNC Trigger: ACAGTTCTTATTCCGAGGCAGCTGCTCCTTCTCTCAGTTCAAGCAGCCAGTAAACAGCCAAGAGGAAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | GAATCATTAAAATCTCGCCATGTGAACAGGAACCCATaGGGACAGAGAAGCAGAACGGAACCTGGAAAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: ESLKSRHVNRNP*GQRSRTEPGKP Trigger: CGGCTTTCCAGGTTCCGTTCTGCTTCTCTGTCCTCATGGGTTCCTGTTCACATGGCGAGATTTTAATGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR GCA 72 bp | CAGAGAGTGGAAACCAAGCCCATGAGCAGCCTCTGGTaGCGGTCTTCCTCTTGTAAGAATGGTATTAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: QRVETKPMSSLW*RSSSCKNGINL Trigger: AAGATTAATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGGTTTCCACTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | GCCACCACAAAGGCAAAGGCTGGTCTAAGCCCTGTATaGACAAATGGTTATTTGTCCAGTTCCTCCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: ATTKAKAGLSPV*TNGYLSSSSKL Trigger: CAGTTTGGAGGAACTGGACAAATAACCATTTGTCCATACAGGGCTTAGACCAGCCTTTGCCTTTGTGGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | AATGTGAATACACTGGACAAAGTGATCCAGGCCAGGTaGAGCAGGATGTCACAGCTGTCATCACACGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: NVNTLDKVIQAR*SRMSQLSSHDL Trigger: TAAGTCGTGTGATGACAGCTGTGACATCCTGCTCCACCTGGCCTGGATCACTTTGTCCAGTGTATTCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTCACACGGCCTTGAACTaGTTCTTTCCTCTTGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RTVPKPTALQYILTCSQSHTALN*FFPLGC Trigger: ACAGCCAAGAGGAAAGAACAAGTTCAAGGCCGTGTG...AGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCGGCAGGGACTGCAAAGGACTTGGAGGTAGCACAGCAGCTATTTTGTTGTAAACTCCCTGTATGGTaGGTAAAAATGCAGAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TPAGTAKDLEVAQQLFCCKLPVW*VKMQRE Trigger: TTCTCTCTGCATTTTTACCAACCATACAGGGAGTTT...ACAACAAAATAGCTGCTGTGCTACCTCCAAGTCCTTTGCAGTCCCTGCCGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGTATGACTGGTCAAGGGTTACTCTATAGACCTTTCCAGAATAGCAGTCCAGGGACTGCAAAGGACTaGGAGGTAGCACAGCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: TSMTGQGLLYRPFQNSSPGTAKD*EVAQQL Trigger: TAGCTGCTGTGCTACCTCCAAGTCCTTTGCAGTCCC...TGGACTGCTATTCTGGAAAGGTCTATAGAGTAACCCTTGACCAGTCATACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCACTCCGTTATCAATGTAGTGCAGAAGGCTGTACAAAGGGAGGCAGTGGAAAACTCCCTGTATGGTaGGTAAAAATGCAGAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AALRYQCSAEGCTKGGSGKLPVW*VKMQRE Trigger: TTCTCTCTGCATTTTTACCAACCATACAGGGAGTTT...TCCACTGCCTCCCTTTGTACAGCCTTCTGCACTACATTGATAACGGAGTGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | CAAATGGTTATTTGTCCAGTTCCTCCAAACTGGACGTaGCAGGCTTTGCTTCCTCAGTTTCAGGTTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QMVICPVPPNWT*QALLPQFQVLL Trigger: CAGGAGAACCTGAAACTGAGGAAGCAAAGCCTGTCACGTCCAGTTTGGAGGAACTGGACAAATAACCATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | ACAGAGGCCGGACTGAGGCCTGCACTTTTAGTTCTCTaGGATGACTCATCTACCCAGAGAATATGCTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TEAGLRPALLVL*DDSSTQRICFQ Trigger: TTGAAAGCATATTCTCTGGGTAGATGAGTCATCTCAGAGAACTAAAAGTGCAGGCCTCAGTCCGGCCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR GCA 72 bp | CAGAGCCAACCAAAGAGGAAGCACCGAGGAAGACTATaGTCAAGCAAAGACAGTTACAGAGCAAAAACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QSQPKRKHRGRL*SSKDSYRAKTN Trigger: GTTGGTTTTTGCTCTGTAACTGTCTTTGCTTGAGCATAGTCTTCCTCGGTGCTTCCTCTTTGGTTGGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
||
| 3UTR GCA 72 bp | GGTGGTGTGTTTCAGAGCAGCTTCCTCTACAAATTCTaGGTCCACATTGTCATGTCCTTCAAAGCCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: GGVFQSSFLYKF*VHIVMSFKAIQ Trigger: CTGTATGGCTTTGAAGGACATGACAATGTGGACGCAGAATTTGTAGAGGAAGCTGCTCTGAAACACACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | AAAGGCAAAGGCTGGTCTAAGCCCTGTATGGACAAATaGTTATTTGTCCAGTTCCTCCAAACTGGACGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: KGKGWSKPCMDK*LFVQFLQTGRD Trigger: GTCACGTCCAGTTTGGAGGAACTGGACAAATAACCATTTGTCCATACAGGGCTTAGACCAGCCTTTGCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | GTACCCCTTCAAGCCGTAGACCTTCATAAGAGGCAATaGGAGTTCCTCTGTCGTAAACTTTATTCCGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VPLQAVDLHKRQ*EFLCRKLYSGN Trigger: ATTCCCGGAATAAAGTTTACGACAGAGGAACTCCCATTGCCTCTTATGAAGGTCTACGGCTTGAAGGGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | TCCGTCTGCACGTCCACTTTCATAAGCCCAAAAGCATaGTGGTGTGTTTCAGAGCAGCTTCCTCTACAAATT | + |
|
Preference number: 3 (lower is better) Translates to: SVCTSTFISPKA*WCVSEQLPLQI Trigger: AATTTGTAGAGGAAGCTGCTCTGAAACACACCACCATGCTTTTGGGCTTATGAAAGTGGACGTGCAGACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCACTTCCAGGAGCTGCAGTGAAGATCTTTCTGTATCCTTTATGGAGGTAGAAAGGGAGGTGAAAATATaGAAATCGTCCGTCTGCACG | + |
|
Preference number: 3 (lower is better) Translates to: STSRSCSEDLSVSFMEVEREVKI*KSSVCT Trigger: CGTGCAGACGGACGATTTCAATATTTTCACCTCCCT...TTCTACCTCCATAAAGGATACAGAAAGATCTTCACTGCAGCTCCTGGAAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | GTCTCTTGGGAGATGGCTAGAATTTCTAATCACCTCTaGATCCCCATACGCAAGCAAAGTTCTTCAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: VSWEMARISNHL*IPIRKQSSSAL Trigger: CAGTGCTGAAGAACTTTGCTTGCGTATGGGGATTCAGAGGTGATTAGAAATTCTAGCCATCTCCCAAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | ATATGGCTCTATCTGAGCCACCACAAAGGCAAAGGCTaGTCTAAGCCCTGTATGGACAAATGGTTATTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: IWLYLSHHKGKG*SKPCMDKWLFV Trigger: GACAAATAACCATTTGTCCATACAGGGCTTAGACCAGCCTTTGCCTTTGTGGTGGCTCAGATAGAGCCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | GAACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTaGCCTGTTCCCAATCTTAAAGACAGTGGGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ELYRSQQLCSIF*PVPNLKDSGKV Trigger: AACTTTCCCACTGTCTTTAAGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR GCA 72 bp | TGTATACTTAATGTACTCAAGGTTGGAGTTCAGCTTTaGCCAGTACCCCTTCAAGCCGTAGACCTTCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: CILNVLKVGVQL*PVPLQAVDLHK Trigger: CTTATGAAGGTCTACGGCTTGAAGGGGTACTGGGCAAAGCTGAACTCCAACCTTGAGTACATTAAGTATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR GCA 72 bp | CAAGAATGTTCCTCACGTACATTGTGGATCTCCTTTTaGCCGTTCTCTCTTCAGAGATCAGGTTATGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: QECSSRTLWISF*PFSLQRSGYAI Trigger: AATGGCATAACCTGATCTCTGAAGAGAGAACGGGCAAAAGGAGATCCACAATGTACGTGAGGAACATTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR GCA 72 bp | CAGTGTCCTCGTTTCCATGCTAGCAATCACCTTCATTaGGTTTTCAAGAATGTTCCTCACGTACATTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QCPRFHASNHLH*VFKNVPHVHCG Trigger: TCCACAATGTACGTGAGGAACATTCTTGAAAACGCAATGAAGGTGATTGCTAGCATGGAAACGAGGACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195969.5 |
||
| 3UTR GCA 72 bp | GATGTCACAGCTGTCATCACACGACTTAGAAGAGCATaGCACTTAAATGTTAAGATTTGCTTCTTTGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: DVTAVITRLRRA*HLNVKICFFGG Trigger: GCCCCCAAAGAAGCAAATCTTAACATTTAAGTGGCATGCTCTTCTAAGTCGTGTGATGACAGCTGTGACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
||
| 3UTR TCA 72 bp | CACTCCAATAGGAGGAAGCAATTAGAAATTCTTGAATaGGGTCAAATGAATGGCAAGCAGAGACATGCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: HSNRRKQLEILE*GQMNGKQRHAP Trigger: CGGAGCATGTCTCTGCTTGCCATTCATTTGACCTCATTCAAGAATTTCTAATTGCTTCCTCCTATTGGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR TCA 72 bp | TGGGGGCTTCTCCATTTAATAGTATTAAGCCAGAGCTaGTCTAAGTTACCTGAATTGATGGGTACAGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: WGLLHLIVLSQS*SKLPELMGTGN Trigger: GTTCCCTGTACCCATCAATTCAGGTAACTTAGATCAGCTCTGGCTTAATACTATTAAATGGAGAAGCCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
||
| 3UTR CCA 72 bp | GCAGAAATTCTACCGGAAATGATGATTTGTCAATCATaGAGTTCCGAGGCTCTTTCCTGTAGTTTTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AEILPEMMICQS*SSEALSCSFSA Trigger: TGCTGAAAAACTACAGGAAAGAGCCTCGGAACTCCATGATTGACAAATCATCATTTCCGGTAGAATTTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | CTTATAAAAGCCGACTTTACCATTATCCATCATAAGTaGTCCTCTATAGGGTGTGTGCCTATAGAAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LIKADFTIIHHK*SSIGCVPIEVS Trigger: AGACACTTCTATAGGCACACACCCTATAGAGGACCACTTATGATGGATAATGGTAAAGTCGGCTTTTATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR CCA 72 bp | AACTCTGAACACACAGACTTAGAAGGAAAGAAGCCCTaGCTTTCATCAAGTTCTCTTCTTAATTCAATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: NSEHTDLEGKKP*LSSSSLLNSML Trigger: TAGCATTGAATTAAGAAGAGAACTTGATGAAAGCCAGGGCTTCTTTCCTTCTAAGTCTGTGTGTTCAGAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGTGCAACAGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTGCCGTCTGTGACCTGTaGGTCAGCACCGTTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSATEPAPGLLGHQGGHCAVCDL*VSTVCD Trigger: GTCACAAACGGTGCTGACTCACAGGTCACAGACGGC...ACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGCAACAGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTCCCATGAGCAGCCTCTaGTGCCGGTCTTCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSATEPAPGLLGHQGGHCPMSSL*CRSSSC Trigger: ACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGG...ACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| 3UTR CAA 72 bp | CCCAGTGGTCTACAGGAAGCCAAGGACAGCAGTTCCTaGAGAGTTGACCACACAGGCAGCCAGCCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGLQEAKDSSS*RVDHTGSQPGP Trigger: TGGACCTGGCTGGCTGCCTGTGTGGTCAACTCTCAAGGAACTGCTGTCCTTGGCTTCCTGTAGACCACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| CDS-3UTR TCA 90 bp | AGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTTCCTGCCGCAGCATGGTTCCGTGAAATaGTATTGGAACTCATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTSSRPTGPPRRALFLPQHGSVK*YWNSWG Trigger: ACCCCATGAGTTCCAATATCATTTCACGGAACCATG...CTGCGGCAGGAACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | ACGTCATACAGCATGCCCCGTGTTTCTAGTCCATCTGCTGGTCTCGGGGAAAGCTTGGAACTCATGGGGTaGTCCCAAAGCCGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TSYSMPRVSSPSAGLGESLELMG*SQSRQT Trigger: GGTCTGCCGGCTTTGGGACCACCCCATGAGTTCCAA...GCTTTCCCCGAGACCAGCAGATGGACTAGAAACACGGGGCATGCTGTATGACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| 3UTR CAA 72 bp | TTCAGCAGCCGGGCCACATGGTTCCGTGAAATGATATaGGAACTCATGGGGTGGTCCCAAAGCCGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FSSRATWFREMI*ELMGWSQSRQT Trigger: GGTCTGCCGGCTTTGGGACCACCCCATGAGTTCCAATATCATTTCACGGAACCATGTGGCCCGGCTGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGCAACAGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTACCCCAAGGATCGTGTaGAGAGAGTGGAAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSATEPAPGLLGHQGGHCTPRIV*REWKPG Trigger: TCCTGGTTTCCACTCTCTGCACACGATCCTTGGGGT...ACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| 3UTR CAA 72 bp | CCAAGGAGGGCACTGTTCCTGCCGCAGCACACGGCCTaGAACTTGTTCTTTCCTCTTGGCTGTTTACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRRALFLPQHTA*NLFFPLGCLLA Trigger: AGCCAGTAAACAGCCAAGAGGAAAGAACAAGTTCAAGGCCGTGTGCTGCGGCAGGAACAGTGCCCTCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGGAGATGAGAAAGGACCGAACGAACACCTCATCAGGTGTCAGGGGCCTTCAGAGATCAGGTTATaGCATTCCCTCCTCACGACG | + |
|
Preference number: 4 (lower is better) Translates to: QEGDEKGPNEHLIRCQGPSEIRL*HSLLTT Trigger: CGTCGTGAGGAGGGAATGGCATAACCTGATCTCTGA...AGGCCCCTGACACCTGATGAGGTGTTCGTTCGGTCCTTTCTCATCTCCCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGCAACAGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTGTCAGAAACAGACTGTaGCAGACCAAGTCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FSATEPAPGLLGHQGGHCVRNRL*QTKSGC Trigger: GCATCCAGACTTGGTCTGCCACAGTCTGTTTCTGAC...ACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR TCA 90 bp | GACCCCGGCAGGGACTGCAAAGGACTTGGAGGTAGCACAGCAGCTATTTTGTTGCTCCATCTTCTCTGGTaGTCTGGATATGAAACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPGRDCKGLGGSTAAILLLHLLW*SGYETA Trigger: AGCGGTTTCATATCCAGATCACCAGAGAAGATGGAG...CAACAAAATAGCTGCTGTGCTACCTCCAAGTCCTTTGCAGTCCCTGCCGGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| CDS-3UTR GCA 90 bp | AGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTTCCTGCCGCAGGTTAAAACTTTCATCTaGCCTAAACTGGATGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RTSSRPTGPPRRALFLPQVKTFI*PKLDAF Trigger: AAATGCATCCAGTTTAGGGCAGATGAAAGTTTTAAC...CTGCGGCAGGAACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCATCTGCTGGTCTCGGGGAAAGCAAGCATGCCTTCTGGTGGGTCCCTGTTCCTCTACAAATTCTaGGTCCACATTGTCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVHLLVSGKASMPSGGSLFLYKF*VHIVMS Trigger: GGACATGACAATGTGGACGCAGAATTTGTAGAGGAA...CAGGGACCCACCAGAAGGCATGCTTGCTTTCCCCGAGACCAGCAGATGGACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCCGCAGCACACGGCCTTGAACTTGTTCTTTCCTCTTGGCTGTTTACTGGCTTCCAGGAGCTGCAGTaGAGATCTTTCTGTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAAAHGLELVLSSWLFTGFQELQ*RSFCIL Trigger: AAGGATACAGAAAGATCTTCACTGCAGCTCCTGGAA...GCCAGTAAACAGCCAAGAGGAAAGAACAAGTTCAAGGCCGTGTGCTGCGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR GCA 90 bp | AGGGGCCTCTGCCTAGTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGTTCAAAGCCATACAGTaGTTGGTTGGAGGACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLVTLTGSRCLMQIRFKAIQ*LVGGLQ Trigger: CTGGAGTCCTCCAACCAAGCACTGTATGGCTTTGAA...CCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGACTAGGCAGAGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR GCA 90 bp | TCATACAGCATGCCCCGTGTTTCTAGTCCATCTGCTGGTCTCGGGGAAAGCAAGTTCAAAGCCATACAGTaGTTGGTTGGAGGACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYSMPRVSSPSAGLGESKFKAIQ*LVGGLQ Trigger: CTGGAGTCCTCCAACCAAGCACTGTATGGCTTTGAA...CTTGCTTTCCCCGAGACCAGCAGATGGACTAGAAACACGGGGCATGCTGTATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGGAGATGAGAAAGGACCGAACGAACACCTCATCAGGTGTCAGGGGCCTCTGTCTCTTGGGAGATaGCTAGAATTTCTAATCACC | + |
|
Preference number: 4 (lower is better) Translates to: QEGDEKGPNEHLIRCQGPLSLGR*LEFLIT Trigger: GGTGATTAGAAATTCTAGCCATCTCCCAAGAGACAG...AGGCCCCTGACACCTGATGAGGTGTTCGTTCGGTCCTTTCTCATCTCCCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | CTGTTCCTGCCGCAGCACACGGCCTTGAACTTGTTCTTTCCTCTTGGCTGTTTAAGGTGTCTCAGTAGGTaGTCTCTTAGCTCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LFLPQHTALNLFFPLGCLRCLSR*SLSSDT Trigger: GGTGTCTGAGCTAAGAGACCACCTACTGAGACACCT...TAAACAGCCAAGAGGAAAGAACAAGTTCAAGGCCGTGTGCTGCGGCAGGAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | AGAACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTTTGGAACTCATGGGGTaGTCCCAAAGCCGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RTVPKPTALQYILTCSQSLELMG*SQSRQT Trigger: GGTCTGCCGGCTTTGGGACCACCCCATGAGTTCCAA...AGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | CCTGCCGCAGCACACGGCCTTGAACTTGTTCTTTCCTCTTGGCTGTTTACTGGCATAAGCCCAAAAGCATaGTGGTGTGTTTCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAAAHGLELVLSSWLFTGISPKA*WCVSEQ Trigger: CTGCTCTGAAACACACCACCATGCTTTTGGGCTTAT...GCCAGTAAACAGCCAAGAGGAAAGAACAAGTTCAAGGCCGTGTGCTGCGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | ACGTCATACAGCATGCCCCGTGTTTCTAGTCCATCTGCTGGTCTCGGGGAAAGCATAAGCCCAAAAGCATaGTGGTGTGTTTCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSYSMPRVSSPSAGLGESISPKA*WCVSEQ Trigger: CTGCTCTGAAACACACCACCATGCTTTTGGGCTTAT...GCTTTCCCCGAGACCAGCAGATGGACTAGAAACACGGGGCATGCTGTATGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCTCTGCCTAGTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGATGAGGTCAAATGAATaGCAAGCAGAGACATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLVTLTGSRCLMQIRMRSNE*QAETCS Trigger: GGAGCATGTCTCTGCTTGCCATTCATTTGACCTCAT...CCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGACTAGGCAGAGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR TCA 90 bp | ACCAAGCCCATGAGCAGCCTCTGGTGCCGGTCTTCCTCTTGTAAGAATGGTATTTCTCTCACTGTTGACTaGACAACTGACAGCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKPMSSLWCRSSSCKNGISLTVD*TTDSLH Trigger: ATGCAAGCTGTCAGTTGTTCAGTCAACAGTGAGAGA...AATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| CDS-3UTR TCA 90 bp | GGCATTGTCCCCTGTGTTTGTATTAGATTCTTTAGTGCAACAGAACCAGCTCCAACCGTTTGTGACCTGTaGGTCAGCACTTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIVPCVCIRFFSATEPAPTVCDL*VSTSRS Trigger: GCTCCTGGAAGTGCTGACTCACAGGTCACAAACGGT...TGGAGCTGGTTCTGTTGCACTAAAGAATCTAATACAAACACAGGGGACAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCTCTGCCTAGTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGCCATCAGAATTTCGATaGAGTAGTTCAGAGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLVTLTGSRCLMQIRPSEFR*SSSEAE Trigger: TTCTGCCTCTGAACTACTTCATCGAAATTCTGATGG...CCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGACTAGGCAGAGGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR TCA 90 bp | TCATACAGCATGCCCCGTGTTTCTAGTCCATCTGCTGGTCTCGGGGAAAGCAAGCCATCAGAATTTCGATaGAGTAGTTCAGAGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SYSMPRVSSPSAGLGESKPSEFR*SSSEAE Trigger: TTCTGCCTCTGAACTACTTCATCGAAATTCTGATGG...CTTGCTTTCCCCGAGACCAGCAGATGGACTAGAAACACGGGGCATGCTGTATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| CDS-3UTR GCA 90 bp | GCACTCCGTTATCAATGTAGTGCAGAAGGCTGTACAAAGGGAGGCAGTGGACCCTCAAAGGTGTACAGATaGTCATTCTGTCTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRYQCSAEGCTKGGSGPSKVYR*SFCLVW Trigger: CCAAACCAGACAGAATGAGCATCTGTACACCTTTGA...GGGTCCACTGCCTCCCTTTGTACAGCCTTCTGCACTACATTGATAACGGAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGCAGCTGCCTCGGAATAAGAACTGTACCGAAGCCAACAGCTCTGCAGTATATGACTTTCAGCTTGTaGGTAGAGGAACTGTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSSCLGIRTVPKPTALQYMTFSL*VEELYP Trigger: TGGGTACAGTTCCTCTACCCACAAGCTGAAAGTCAT...ATACTGCAGAGCTGTTGGCTTCGGTACAGTTCTTATTCCGAGGCAGCTGCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| CDS-3UTR CCA 90 bp | CCTGCCGCAGCACACGGCCTTGAACTTGTTCTTTCCTCTTGGCTGTTTACTGGCCACAAACTCCCTGTATaGTTGGTAAAAATGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PAAAHGLELVLSSWLFTGHKLPV*LVKMQR Trigger: TCTCTGCATTTTTACCAACCATACAGGGAGTTTGTG...GCCAGTAAACAGCCAAGAGGAAAGAACAAGTTCAAGGCCGTGTGCTGCGGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | GGCATTGTCCCCTGTGTTTGTATTAGATTCTTTAGTGCAACAGAACCAGCTCCATACAAAGGGAGGCAGTaGACCCCAAGGATCGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GIVPCVCIRFFSATEPAPYKGRQ*TPRIVC Trigger: GCACACGATCCTTGGGGTCCACTGCCTCCCTTTGTA...TGGAGCTGGTTCTGTTGCACTAAAGAATCTAATACAAACACAGGGGACAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| 3UTR CAA 72 bp | GTCCACATTGTCATGTCCTTCAAAGCCATACAGTGCTaGGTTGGAGGACTCCAGGCCCATCAGAATTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHIVMSFKAIQC*VGGLQAHQNFD Trigger: ATCGAAATTCTGATGGGCCTGGAGTCCTCCAACCAAGCACTGTATGGCTTTGAAGGACATGACAATGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| CDS-3UTR GCA 90 bp | GTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGCTATACCCAAAACTTGTTGGAGTTCAGCTTTaGCCAGTACCCCTTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTLTGSRCLMQIRLYPKLVGVQL*PVPLQA Trigger: GGCTTGAAGGGGTACTGGGCAAAGCTGAACTCCAAC...AAGTTTTGGGTATAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGCTGCCTCGGAATAAGAACTGTACCGAAGCCAACAGCTCTGCAGTATTTCCTCTACAAATTCTaGGTCCACATTGTCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSSCLGIRTVPKPTALQYFLYKF*VHIVMS Trigger: GGACATGACAATGTGGACGCAGAATTTGTAGAGGAA...ATACTGCAGAGCTGTTGGCTTCGGTACAGTTCTTATTCCGAGGCAGCTGCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR TCA 90 bp | AGAACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTCTGTGGTATACTGAATaGAACTCGCAGCAAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RTVPKPTALQYILTCSQSLWYTE*NSQQAL Trigger: CAGTGCTTGCTGCGAGTTTCATTCAGTATACCACAG...AGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| CDS-3UTR TCA 90 bp | AGGAGCAGCTGCCTCGGAATAAGAACTGTACCGAAGCCAACAGCTCTGCAGTATATCCTGGTCATGAGATaGAAGACTTCAAAATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSSCLGIRTVPKPTALQYILVMR*KTSKSA Trigger: TGCAGATTTTGAAGTCTTTCATCTCATGACCAGGAT...ATACTGCAGAGCTGTTGGCTTCGGTACAGTTCTTATTCCGAGGCAGCTGCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR TCA 90 bp | AGCATGCCTTCTGGTGGGTCCCTGTTCCCAATCTTAAAGACAGTGGGAAAGTTTCATGGTTCCGTGAAATaGTATTGGAACTCATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMPSGGSLFPILKTVGKFHGSVK*YWNSWG Trigger: ACCCCATGAGTTCCAATATCATTTCACGGAACCATG...AAACTTTCCCACTGTCTTTAAGATTGGGAACAGGGACCCACCAGAAGGCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTATTAGATTCTTTAGTGCAACAGAACCAGCTCCAGGCCTACTGGGCCACCCAGGATAGTATACAGTaGAGTGCAGCCATTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FVLDSLVQQNQLQAYWATQDSIQ*SAAILS Trigger: TGAGAGAATGGCTGCACTGCACTGTATACTATCCTG...GGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAAGAATCTAATACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | CTGCCTAGTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGCTATACCCCAATGGCTATTGAGGTaGAGAACCAATGGATGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LPSHTDGLKMPYANKAIPQWLLR*RTNGCI Trigger: TATGCATCCATTGGTTCTCCACCTCAATAGCCATTG...GGGTATAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGACTAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | AGAACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTAGCCCAAAAGCATGGTaGTGTGTTTCAGAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTVPKPTALQYILTCSQSSPKAW*CVSEQL Trigger: AAGCTGCTCTGAAACACACCACCATGCTTTTGGGCT...AGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| 3UTR CAA 72 bp | TGCAAAGGACTTGGAGGTAGCACAGCAGCTATTTTGTaGTTTCCTGTCAGAAACAGACTGTGGCAGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CKGLGGSTAAIL*FPVRNRLWQTK Trigger: CTTGGTCTGCCACAGTCTGTTTCTGACAGGAAACAACAAAATAGCTGCTGTGCTACCTCCAAGTCCTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| 3UTR CAA 72 bp | ACATTGTCATGTCCTTCAAAGCCATACAGTGCTTGGTaGGAGGACTCCAGGCCCATCAGAATTTCGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSCPSKPYSAW*EDSRPIRISMK Trigger: CTTCATCGAAATTCTGATGGGCCTGGAGTCCTCCAACCAAGCACTGTATGGCTTTGAAGGACATGACAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| CDS-3UTR TCA 90 bp | GGCATTGTCCCCTGTGTTTGTATTAGATTCTTTAGTGCAACAGAACCAGCTCCACTCCATCTTCTCTGGTaGTCTGGATATGAAACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GIVPCVCIRFFSATEPAPLHLLW*SGYETA Trigger: AGCGGTTTCATATCCAGATCACCAGAGAAGATGGAG...TGGAGCTGGTTCTGTTGCACTAAAGAATCTAATACAAACACAGGGGACAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| CDS-3UTR GCA 90 bp | GTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGCTATACCCAAAACTTTGGCAAGCAGAGACATaGTCCGAAATCCACTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VTLTGSRCLMQIRLYPKLWQAET*SEIHWI Trigger: TATCCAGTGGATTTCGGAGCATGTCTCTGCTTGCCA...AAGTTTTGGGTATAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGCTGCCTCGGAATAAGAACTGTACCGAAGCCAACAGCTCTGCAGTATAGCAATCACCTTCATTaGGTTTTCAAGAATGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSSCLGIRTVPKPTALQYSNHLH*VFKNVP Trigger: AGGAACATTCTTGAAAACGCAATGAAGGTGATTGCT...ATACTGCAGAGCTGTTGGCTTCGGTACAGTTCTTATTCCGAGGCAGCTGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR GCA 90 bp | GTCACACTGACGGGCTCAAGATGCCTTATGCAAATAAGGCTATACCCAAAACTTTTCTTTTCTACACCCTaGAGGTGTCTCAGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTLTGSRCLMQIRLYPKLFFSTP*RCLSRW Trigger: CCACCTACTGAGACACCTGCAGGGTGTAGAAAAGAA...AAGTTTTGGGTATAGCCTTATTTGCATAAGGCATCTTGAGCCCGTCAGTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
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| CDS-3UTR CCA 90 bp | CACCAGGCTGGCCTTGAACTGAGAGATTCACCTGCCTCTGGAATTAATTCTATAATGACTTTCAGCTTGTaGGTAGAGGAACTGTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQAGLELRDSPASGINSIMTFSL*VEELYP Trigger: TGGGTACAGTTCCTCTACCCACAAGCTGAAAGTCAT...TATAGAATTAATTCCAGAGGCAGGTGAATCTCTCAGTTCAAGGCCAGCCTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
||
| CDS-3UTR TCA 90 bp | AGAATCATTAAAATCTCGCCATGTGAACAGGAACCCATGAGGACAGAGAAGCAGTCTCTCACTGTTGACTaGACAACTGACAGCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RIIKISPCEQEPMRTEKQSLTVD*TTDSLH Trigger: ATGCAAGCTGTCAGTTGTTCAGTCAACAGTGAGAGA...CTGCTTCTCTGTCCTCATGGGTTCCTGTTCACATGGCGAGATTTTAATGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| CDS-3UTR TCA 90 bp | AACTTTATTCCGGGAATTTCTGTGTTCCAAGTCAGCACAGAGGAGTATTGTAGGCTGTGGTATACTGAATaGAACTCGCAGCAAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NFIPGISVFQVSTEEYCRLWYTE*NSQQAL Trigger: CAGTGCTTGCTGCGAGTTTCATTCAGTATACCACAG...CCTACAATACTCCTCTGTGCTGACTTGGAACACAGAAATTCCCGGAATAAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| CDS-3UTR GCA 90 bp | ACCACAAAGGCAAAGGCTGGTCTAAGCCCTGTATGGACAAATGGTTATTTGTCCTCAAAGGTGTACAGATaGTCATTCTGTCTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTKAKAGLSPVWTNGYLSSKVYR*SFCLVW Trigger: CCAAACCAGACAGAATGAGCATCTGTACACCTTTGA...GGACAAATAACCATTTGTCCATACAGGGCTTAGACCAGCCTTTGCCTTTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| CDS-3UTR GCA 90 bp | CTCACGTACATTGTGGATCTCCTTTTGCCCGTTCTCTCTTCAGAGATCAGGTTATCAAAGGTGTACAGATaGTCATTCTGTCTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTYIVDLLLPVLSSEIRLSKVYR*SFCLVW Trigger: CCAAACCAGACAGAATGAGCATCTGTACACCTTTGA...TAACCTGATCTCTGAAGAGAGAACGGGCAAAAGGAGATCCACAATGTACGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| CDS-3UTR CCA 90 bp | AGCACTTCCAGGAGCTGCAGTGAAGATCTTTCTGTATCCTTTATGGAGGTAGAAATGACTTTCAGCTTGTaGGTAGAGGAACTGTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: STSRSCSEDLSVSFMEVEMTFSL*VEELYP Trigger: TGGGTACAGTTCCTCTACCCACAAGCTGAAAGTCAT...TTCTACCTCCATAAAGGATACAGAAAGATCTTCACTGCAGCTCCTGGAAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| CDS-3UTR CCA 90 bp | CATAAGCCCAAAAGCATGGTGGTGTGTTTCAGAGCAGCTTCCTCTACAAATTCTATGACTTTCAGCTTGTaGGTAGAGGAACTGTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKPKSMVVCFRAASSTNSMTFSL*VEELYP Trigger: TGGGTACAGTTCCTCTACCCACAAGCTGAAAGTCAT...AGAATTTGTAGAGGAAGCTGCTCTGAAACACACCACCATGCTTTTGGGCTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| 3UTR CAA 72 bp | TCAAGAATGTTCCTCACGTACATTGTGGATCTCCTTTaGCCCGTTCTCTCTTCAGAGATCAGGTTATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRMFLTYIVDLL*PVLSSEIRLCH Trigger: ATGGCATAACCTGATCTCTGAAGAGAGAACGGGCAAAAGGAGATCCACAATGTACGTGAGGAACATTCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
||
| 3UTR CAA 72 bp | CAGTGGGAAAGTTTCCAGAAAAGGGAGGTGAAAATATaGAAATCGTCCGTCTGCACGTCCACTTTCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QWESFQKREVKI*KSSVCTSTFIS Trigger: GCTTATGAAAGTGGACGTGCAGACGGACGATTTCAATATTTTCACCTCCCTTTTCTGGAAACTTTCCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
||
| CDS-3UTR TCA 90 bp | GGCATTGTCCCCTGTGTTTGTATTAGATTCTTTAGTGCAACAGAACCAGCTCCAAGAACACTGAATATGTaGTTTCTTCCCGTGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIVPCVCIRFFSATEPAPRTLNM*FLPVSQ Trigger: CTGACTCACGGGAAGAAATCACATATTCAGTGTTCT...TGGAGCTGGTTCTGTTGCACTAAAGAATCTAATACAAACACAGGGGACAATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR GCA 90 bp | AACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTTAAACACAGCTATCCACTaGTTTCAGAACCTTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: NCTEANSSAVYSDLFPILNTAIH*FQNLHV Trigger: AACGTGAAGGTTCTGAAAGCAGTGGATAGCTGTGTT...TAAGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
||
| 3UTR CAA 72 bp | GCAGAGAGAAGGCTGATTGCACAGCTTCTCACGGTCTaGACGATAGTCATATCCAAAGTTGACAAGTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AERRLIAQLLTV*TIVISKVDKFK Trigger: TTTAAACTTGTCAACTTTGGATATGACTATCGTCAAGACCGTGAGAAGCTGTGCAATCAGCCTTCTCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGCTTCTCACGGTCTTGACGATAGTCATATCCAAAGTTGACAAGTTTAAATCTCTCACTGTTGACTaGACAACTGACAGCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQLLTVLTIVISKVDKFKSLTVD*TTDSLH Trigger: ATGCAAGCTGTCAGTTGTTCAGTCAACAGTGAGAGA...TTTAAACTTGTCAACTTTGGATATGACTATCGTCAAGACCGTGAGAAGCTGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCTCCAGTACAGAGTAATTTGTAACACAAGCAATATGAACAGACAGAAACACTGCAATGGCTATTaGGGTGGAGAACCAATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CCLQYRVICNTSNMNRQKHCNGY*GGEPMD Trigger: ATCCATTGGTTCTCCACCTCAATAGCCATTGCAGTG...TTTCTGTCTGTTCATATTGCTTGTGTTACAAATTACTCTGTACTGGAGACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR GCA 90 bp | CTCACGGTCTTGACGATAGTCATATCCAAAGTTGACAAGTTTAAATCTCAAGCCTCAAAGGTGTACAGATaGTCATTCTGTCTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTVLTIVISKVDKFKSQASKVYR*SFCLVW Trigger: CCAAACCAGACAGAATGAGCATCTGTACACCTTTGA...GGCTTGAGATTTAAACTTGTCAACTTTGGATATGACTATCGTCAAGACCGTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 |
||
| CDS-3UTR GCA 90 bp | AACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTTAAAAGACTTCAAAATCTaGAGCACTGCAATGGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: NCTEANSSAVYSDLFPILKDFKI*STAMAI Trigger: AATAGCCATTGCAGTGCTGCAGATTTTGAAGTCTTT...TAAGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCTCCAGTACAGAGTAATTTGTAACACAAGCAATATGAACAGACAGAAATTGTGGATCTCCTTTTaGCCGTTCTCTCTTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CCLQYRVICNTSNMNRQKLWISF*PFSLQR Trigger: TCTCTGAAGAGAGAACGGGCAAAAGGAGATCCACAA...TTTCTGTCTGTTCATATTGCTTGTGTTACAAATTACTCTGTACTGGAGACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCTCCAGTACAGAGTAATTTGTAACACAAGCAATATGAACAGACAGAAATGTGTTTCCTCCAACTaGTTTCCAGCAAGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CCLQYRVICNTSNMNRQKCVSSN*FPASTK Trigger: TTTGGTGCTTGCTGGAAACCAGTTGGAGGAAACACA...TTTCTGTCTGTTCATATTGCTTGTGTTACAAATTACTCTGTACTGGAGACAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTCAGCTGAATTCTTTGAGATCTCTTCATATAGTATGCAACGTCATACAAGCCCAAAAGCATGGTaGTGTGTTTCAGAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IASAEFFEISSYSMQRHTSPKAW*CVSEQL Trigger: AAGCTGCTCTGAAACACACCACCATGCTTTTGGGCT...TGTATGACGTTGCATACTATATGAAGAGATCTCAAAGAATTCAGCTGAAGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| 3UTR CAA 72 bp | CTTCTTAATTCAATGCTATTGCTTCAGCTGAATTCTTaGAGATCTCTTCATATAGTATGCAACGTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNSMLLLQLNS*RSLHIVCNVIQ Trigger: CTGTATGACGTTGCATACTATATGAAGAGATCTCAAAGAATTCAGCTGAAGCAATAGCATTGAATTAAGAAG 35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGGAGATGAGAAAGGACCGAACGAACACCTCATCAGGTGTCAGGGGCCTGGGACTGCAAAGGACTaGGAGGTAGCACAGCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QEGDEKGPNEHLIRCQGPGTAKD*EVAQQL Trigger: TAGCTGCTGTGCTACCTCCAAGTCCTTTGCAGTCCC...AGGCCCCTGACACCTGATGAGGTGTTCGTTCGGTCCTTTCTCATCTCCCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
||
| CDS-3UTR CAA 90 bp | TTTAGTGCAACAGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTAAAGCCATACAGTGCTaGGTTGGAGGACTCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSATEPAPGLLGHQGGHCKAIQC*VGGLQA Trigger: GGCCTGGAGTCCTCCAACCAAGCACTGTATGGCTTT...ACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCTGTTGCACTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
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| CDS GCA 90 bp | TGCAGAAGGCTGTACAAAGGGAGGCAGTGGACCCCAAGGATCGTGTaGAGAGAGTGGAAACCAGGAGGCAGAGGCAAACACAAACTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CRRLYKGRQWTPRIV*REWKPGGRGKHKLL Trigger: TAGCAGTTTGTGTTTGCCTCTGCCTCCTGGTTTCCACTCTCTGCACACGATCCTTGGGGTCCACTGCCTCCCTTTGTACAGCCTTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS-3UTR CAA 90 bp | AGAACCAGCTCCAGGCCTACTGGGCCACCAAGGAGGGCACTGTTCCTGCCGCAGTTCAGAACCTTCACGTaGTTAACAGGGTGTATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTSSRPTGPPRRALFLPQFRTFT*LTGCIS Trigger: AGAAATACACCCTGTTAACAACGTGAAGGTTCTGAA...CTGCGGCAGGAACAGTGCCCTCCTTGGTGGCCCAGTAGGCCTGGAGCTGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| CDS-3UTR CAA 90 bp | CTAGTCCATCTGCTGGTCTCGGGGAAAGCAAGCATGCCTTCTGGTGGGTCCCTGTTCCGTGAAATGATATaGGAACTCATGGGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVHLLVSGKASMPSGGSLFREMI*ELMGWS Trigger: GGACCACCCCATGAGTTCCAATATCATTTCACGGAA...CAGGGACCCACCAGAAGGCATGCTTGCTTTCCCCGAGACCAGCAGATGGACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
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| CDS-3UTR CAA 90 bp | CTAGTCCATCTGCTGGTCTCGGGGAAAGCAAGCATGCCTTCTGGTGGGTCCCTGAATTCTGCGTCCACATaGTCATGTCCTTCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVHLLVSGKASMPSGGSLNSAST*SCPSKP Trigger: TGGCTTTGAAGGACATGACAATGTGGACGCAGAATT...CAGGGACCCACCAGAAGGCATGCTTGCTTTCCCCGAGACCAGCAGATGGACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
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| CDS TCA 90 bp | GGTGTCTCAGTAGGTGGTCTCTTAGCTCAGACACCATCAAGCCCATaGGCAGCCTCTGGTGCCGGTCTTCCTCTTGTAAGAATGGTATTA | + |
|
Preference number: 5 (lower is better) Translates to: GVSVGGLLAQTPSSP*AASGAGLPLVRMVL Trigger: TAATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGATGGTGTCTGAGCTAAGAGACCACCTACTGAGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS CCA 90 bp | AGGTGGTCTCTTAGCTCAGACACCATCAAGCCCATGAGCAGCCTCTaGTGCCGGTCTTCCTCTTGTAAGAATGGTATTAATCTTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWSLSSDTIKPMSSL*CRSSSCKNGINLGS Trigger: GGAGCCAAGATTAATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGATGGTGTCTGAGCTAAGAGACCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS GCA 90 bp | TGGTCTCTTAGCTCAGACACCATCAAGCCCATGAGCAGCCTCTGGTaGCGGTCTTCCTCTTGTAAGAATGGTATTAATCTTGGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WSLSSDTIKPMSSLW*RSSSCKNGINLGSS Trigger: ACTGGAGCCAAGATTAATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGATGGTGTCTGAGCTAAGAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS-3UTR CAA 90 bp | AGGAGCAGCTGCCTCGGAATAAGAACTGTACCGAAGCCAACAGCTCTGCAGTATTTCCGTGAAATGATATaGGAACTCATGGGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSCLGIRTVPKPTALQYFREMI*ELMGWS Trigger: GGACCACCCCATGAGTTCCAATATCATTTCACGGAA...ATACTGCAGAGCTGTTGGCTTCGGTACAGTTCTTATTCCGAGGCAGCTGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
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| CDS-3UTR CAA 90 bp | TCCAGTGACCGCCTGGCTCTCACTGTTCTAGGCATTGTCCCCTGTGTTTGTATTAAGATGACTTTCAGCTaGTGGGTAGAGGAACTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSDRLALTVLGIVPCVCIKMTFS*WVEELY Trigger: GTACAGTTCCTCTACCCACAAGCTGAAAGTCATCTT...AATACAAACACAGGGGACAATGCCTAGAACAGTGAGAGCCAGGCGGTCACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198014.5 |
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| CDS-3UTR CAA 90 bp | GTATGGACAAATGGTTATTTGTCCAGTTCCTCCAAACTGGACGTGACAGGCTTTGGTTGGAGTTCAGCTTaGCCCAGTACCCCTTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VWTNGYLSSSSKLDVTGFGWSSA*PSTPSS Trigger: GCTTGAAGGGGTACTGGGCAAAGCTGAACTCCAACC...AAAGCCTGTCACGTCCAGTTTGGAGGAACTGGACAAATAACCATTTGTCCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
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| CDS-3UTR CAA 90 bp | CTGTTCCTGCCGCAGCACACGGCCTTGAACTTGTTCTTTCCTCTTGGCTGTTTAAATTCTGCGTCCACATaGTCATGTCCTTCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFLPQHTALNLFFPLGCLNSAST*SCPSKP Trigger: TGGCTTTGAAGGACATGACAATGTGGACGCAGAATT...TAAACAGCCAAGAGGAAAGAACAAGTTCAAGGCCGTGTGCTGCGGCAGGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
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| CDS GCA 90 bp | GCAGCAAGCACTGTTCTCTCACTGTTGACTGAACAACTGACAGCTTaGATGTCCTTCTCAAAGGTGTACAGATGCTCATTCTGTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AASTVLSLLTEQLTA*MSFSKVYRCSFCLV Trigger: AACCAGACAGAATGAGCATCTGTACACCTTTGAGAAGGACATGCAAGCTGTCAGTTGTTCAGTCAACAGTGAGAGAACAGTGCTTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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| CDS GCA 90 bp | AAATCTGCAGCACTGCAATGGCTATTGAGGTGGAGAACCAATGGATaGATACTGTGTTTCCTCCAACTGGTTTCCAGCAAGCACCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: KSAALQWLLRWRTNG*ILCFLQLVSSKHQM Trigger: CATTTGGTGCTTGCTGGAAACCAGTTGGAGGAAACACAGTATGCATCCATTGGTTCTCCACCTCAATAGCCATTGCAGTGCTGCAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS CCA 90 bp | TTCAAAATCTGCAGCACTGCAATGGCTATTGAGGTGGAGAACCAATaGATGCATACTGTGTTTCCTCCAACTGGTTTCCAGCAAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FKICSTAMAIEVENQ*MHTVFPPTGFQQAP Trigger: TGGTGCTTGCTGGAAACCAGTTGGAGGAAACACAGTATGCATCCATTGGTTCTCCACCTCAATAGCCATTGCAGTGCTGCAGATTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS TCA 90 bp | GGCAAACACAAACTGCTAGCAGCATCCAAAATCCTGGTCATGAGATaGAAGACTTCAAAATCTGCAGCACTGCAATGGCTATTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GKHKLLAASKILVMR*KTSKSAALQWLLRW Trigger: CCACCTCAATAGCCATTGCAGTGCTGCAGATTTTGAAGTCTTTCATCTCATGACCAGGATTTTGGATGCTGCTAGCAGTTTGTGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS GCA 90 bp | TTCAGCTTGTGGGTAGAGGAACTGTACCCAAACACAGCTATCCACTaGTTTCAGAACCTTCACGTTGTTAACAGGGTGTATTTCTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSLWVEELYPNTAIH*FQNLHVVNRVYFYQ Trigger: CTGGTAGAAATACACCCTGTTAACAACGTGAAGGTTCTGAAAGCAGTGGATAGCTGTGTTTGGGTACAGTTCCTCTACCCACAAGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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| CDS TCA 90 bp | ATACTGAATGAAACTCGCAGCAAGCACTGTTCTCTCACTGTTGACTaGACAACTGACAGCTTGCATGTCCTTCTCAAAGGTGTACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ILNETRSKHCSLTVD*TTDSLHVLLKGVQM Trigger: CATCTGTACACCTTTGAGAAGGACATGCAAGCTGTCAGTTGTTCAGTCAACAGTGAGAGAACAGTGCTTGCTGCGAGTTTCATTCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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| CDS GCA 90 bp | AGCAGCATCCAAAATCCTGGTCATGAGATGAAAGACTTCAAAATCTaGAGCACTGCAATGGCTATTGAGGTGGAGAACCAATGGATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSIQNPGHEMKDFKI*STAMAIEVENQWMH Trigger: ATGCATCCATTGGTTCTCCACCTCAATAGCCATTGCAGTGCTGCAGATTTTGAAGTCTTTCATCTCATGACCAGGATTTTGGATGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS TCA 90 bp | GATGCATACTGTGTTTCCTCCAACTGGTTTCCAGCAAGCACCAAATaGGATCCAGCAGTTTTGAAATGTAGTCCAGAACCATCTGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DAYCVSSNWFPASTK*DPAVLKCSPEPSVQ Trigger: TTGAACAGATGGTTCTGGACTACATTTCAAAACTGCTGGATCTCATTTGGTGCTTGCTGGAAACCAGTTGGAGGAAACACAGTATGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS-3UTR CAA 90 bp | CTCACGTACATTGTGGATCTCCTTTTGCCCGTTCTCTCTTCAGAGATCAGGTTATTCAGAACCTTCACGTaGTTAACAGGGTGTATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTYIVDLLLPVLSSEIRLFRTFT*LTGCIS Trigger: AGAAATACACCCTGTTAACAACGTGAAGGTTCTGAA...TAACCTGATCTCTGAAGAGAGAACGGGCAAAAGGAGATCCACAATGTACGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| CDS-3UTR CAA 90 bp | AGAACTGTACCGAAGCCAACAGCTCTGCAGTATATTCTGACCTGTTCCCAATCTAAACTCCCTGTATGGTaGGTAAAAATGCAGAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RTVPKPTALQYILTCSQSKLPVW*VKMQRE Trigger: TTCTCTCTGCATTTTTACCAACCATACAGGGAGTTT...AGATTGGGAACAGGTCAGAATATACTGCAGAGCTGTTGGCTTCGGTACAGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036031.13 |
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| CDS-3UTR CAA 90 bp | CTATTGCTTCAGCTGAATTCTTTGAGATCTCTTCATATAGTATGCAACGTCATAAAAGCCATACAGTGCTaGGTTGGAGGACTCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLQLNSLRSLHIVCNVIKAIQC*VGGLQA Trigger: GGCCTGGAGTCCTCCAACCAAGCACTGTATGGCTTT...TATGACGTTGCATACTATATGAAGAGATCTCAAAGAATTCAGCTGAAGCAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198930.2 |
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| CDS-3UTR CAA 90 bp | AACTTTATTCCGGGAATTTCTGTGTTCCAAGTCAGCACAGAGGAGTATTGTAGGTTCAGAACCTTCACGTaGTTAACAGGGTGTATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NFIPGISVFQVSTEEYCRFRTFT*LTGCIS Trigger: AGAAATACACCCTGTTAACAACGTGAAGGTTCTGAA...CCTACAATACTCCTCTGTGCTGACTTGGAACACAGAAATTCCCGGAATAAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195969.5 ENSMUST00000198014.5 |
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| CDS CCA 90 bp | TGCATGTCCTTCTCAAAGGTGTACAGATGCTCATTCTGTCTGGTTTaGCAATCATATAATCCAAAAACAGCGTTTCCCTTATTGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CMSFSKVYRCSFCLV*QSYNPKTAFPLLSL Trigger: TAAGGACAATAAGGGAAACGCTGTTTTTGGATTATATGATTGCCAAACCAGACAGAATGAGCATCTGTACACCTTTGAGAAGGACATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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| CDS-3UTR CAA 90 bp | AACTTACTGTGTAGCACACAGTACTATGATAGTGATCTAGTAACAAGGAAATTGTTCAGAACCTTCACGTaGTTAACAGGGTGTATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NLLCSTQYYDSDLVTRKLFRTFT*LTGCIS Trigger: AGAAATACACCCTGTTAACAACGTGAAGGTTCTGAA...CAATTTCCTTGTTACTAGATCACTATCATAGTACTGTGTGCTACACAGTAAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198071.5 |
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| CDS TCA 72 bp | GTAGGTGGTCTCTTAGCTCAGACACCATCAAGCCCATaGGCAGCCTCTGGTGCCGGTCTTCCTCTTGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VGGLLAQTPSSP*AASGAGLPLVR Trigger: TCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGATGGTGTCTGAGCTAAGAGACCACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS CCA 72 bp | TTCTTCTTTTCTACACCCTGCAGGTGTCTCAGTAGGTaGTCTCTTAGCTCAGACACCATCAAGCCCATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FFFSTPCRCLSR*SLSSDTIKPMS Trigger: GCTCATGGGCTTGATGGTGTCTGAGCTAAGAGACCACCTACTGAGACACCTGCAGGGTGTAGAAAAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS CAA 72 bp | GGAGGTAGCACAGCAGCTATTTTGTTGTTTCCAAGGTaGAGGAAAGCGATGCCGTCTGTGACCTGTGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GGSTAAILLFPR*RKAMPSVTCES Trigger: TGACTCACAGGTCACAGACGGCATCGCTTTCCTCAACCTTGGAAACAACAAAATAGCTGCTGTGCTACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198937.2 |
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| CDS GCA 72 bp | AGCTCAGACACCATCAAGCCCATGAGCAGCCTCTGGTaGCGGTCTTCCTCTTGTAAGAATGGTATTAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSDTIKPMSSLW*RSSSCKNGINL Trigger: AAGATTAATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGATGGTGTCTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS CCA 72 bp | CAGGTGGTTCTGTGGAAGAAGATGACTTTCAGCTTGTaGGTAGAGGAACTGTACCCAAACACAGCTATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QVVLWKKMTFSL*VEELYPNTAIH Trigger: GTGGATAGCTGTGTTTGGGTACAGTTCCTCTACCCACAAGCTGAAAGTCATCTTCTTCCACAGAACCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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| CDS CCA 72 bp | CTTAGCTCAGACACCATCAAGCCCATGAGCAGCCTCTaGTGCCGGTCTTCCTCTTGTAAGAATGGTATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: LSSDTIKPMSSL*CRSSSCKNGIN Trigger: ATTAATACCATTCTTACAAGAGGAAGACCGGCACCAGAGGCTGCTCATGGGCTTGATGGTGTCTGAGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS CCA 72 bp | TGCAGCACTGCAATGGCTATTGAGGTGGAGAACCAATaGATGCATACTGTGTTTCCTCCAACTGGTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CSTAMAIEVENQ*MHTVFPPTGFQ Trigger: CTGGAAACCAGTTGGAGGAAACACAGTATGCATCCATTGGTTCTCCACCTCAATAGCCATTGCAGTGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS CAA 72 bp | TGCAAAGGACTTGGAGGTAGCACAGCAGCTATTTTGTaGTTTCCAAGGTTGAGGAAAGCGATGCCGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CKGLGGSTAAIL*FPRLRKAMPSV Trigger: CACAGACGGCATCGCTTTCCTCAACCTTGGAAACAACAAAATAGCTGCTGTGCTACCTCCAAGTCCTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198937.2 |
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| CDS TCA 72 bp | GAAACTCGCAGCAAGCACTGTTCTCTCACTGTTGACTaGACAACTGACAGCTTGCATGTCCTTCTCAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ETRSKHCSLTVD*TTDSLHVLLKG Trigger: ACCTTTGAGAAGGACATGCAAGCTGTCAGTTGTTCAGTCAACAGTGAGAGAACAGTGCTTGCTGCGAGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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| CDS GCA 72 bp | TGGGTAGAGGAACTGTACCCAAACACAGCTATCCACTaGTTTCAGAACCTTCACGTTGTTAACAGGGTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: WVEELYPNTAIH*FQNLHVVNRVY Trigger: ATACACCCTGTTAACAACGTGAAGGTTCTGAAAGCAGTGGATAGCTGTGTTTGGGTACAGTTCCTCTACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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| CDS CAA 90 bp | TGTTTCCATTTCTTTCGATGTTTAGTACACGTAAGCTCCCATAAGTaGTTTCTAAAACACCTGCTCTGTCTCCTTCGTCCGTTGTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: CFHFFRCLVHVSSHK*FLKHLLCLLRPLSP Trigger: CGGCGACAACGGACGAAGGAGACAGAGCAGGTGTTTTAGAAACAACTTATGGGAGCTTACGTGTACTAAACATCGAAAGAAATGGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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| CDS TCA 72 bp | GAAAGACTTCAAAATCTGCAGCACTGCAATGGCTATTaGGGTGGAGAACCAATGGATGCATACTGTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ERLQNLQHCNGY*GGEPMDAYCVS Trigger: GGAAACACAGTATGCATCCATTGGTTCTCCACCTCAATAGCCATTGCAGTGCTGCAGATTTTGAAGTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS CCA 72 bp | ACTTCAAAATCTGCAGCACTGCAATGGCTATTGAGGTaGAGAACCAATGGATGCATACTGTGTTTCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TSKSAALQWLLR*RTNGCILCFLQ Trigger: TTGGAGGAAACACAGTATGCATCCATTGGTTCTCCACCTCAATAGCCATTGCAGTGCTGCAGATTTTGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS TCA 72 bp | AAACTGCTAGCAGCATCCAAAATCCTGGTCATGAGATaGAAGACTTCAAAATCTGCAGCACTGCAATGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: KLLAASKILVMR*KTSKSAALQWL Trigger: TAGCCATTGCAGTGCTGCAGATTTTGAAGTCTTTCATCTCATGACCAGGATTTTGGATGCTGCTAGCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS CAA 72 bp | TTCTTTCGATGTTTAGTACACGTAAGCTCCCATAAGTaGTTTCTAAAACACCTGCTCTGTCTCCTTCGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: FFRCLVHVSSHK*FLKHLLCLLRP Trigger: CGGACGAAGGAGACAGAGCAGGTGTTTTAGAAACAACTTATGGGAGCTTACGTGTACTAAACATCGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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| CDS TCA 72 bp | ACCACTCTGTCTCCATCTTCTCTGGTGATCTGGATATaGAACCGCTCAATATATTTCTCTTCTGAGATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TTLSPSSLVIWI*NRSIYFSSEIS Trigger: ACTGATCTCAGAAGAGAAATATATTGAGCGGTTTCATATCCAGATCACCAGAGAAGATGGAGACAGAGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS TCA 72 bp | GGTTTCCAGCAAGCACCAAATGAGATCCAGCAGTTTTaGAATGTAGTCCAGAACCATCTGTTCAATTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GFQQAPNEIQQF*NVVQNHLFNFL Trigger: AAGAAAATTGAACAGATGGTTCTGGACTACATTTCAAAACTGCTGGATCTCATTTGGTGCTTGCTGGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036031.13 ENSMUST00000198937.2 |
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| CDS TCA 72 bp | ATCACTCTGTCTCCATCTTCTCTGGTGATCTGGATATaGAACCGCTCAATATATTTCTCTTCTGAGATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ITLSPSSLVIWI*NRSIYFSSEIS Trigger: ACTGATCTCAGAAGAGAAATATATTGAGCGGTTTCATATCCAGATCACCAGAGAAGATGGAGACAGAGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198014.5 |
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| CDS CCA 72 bp | TTCTCAAAGGTGTACAGATGCTCATTCTGTCTGGTTTaGCAATCATATAATCCAAAAACAGCGTTTCCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FSKVYRCSFCLV*QSYNPKTAFPL Trigger: TAAGGGAAACGCTGTTTTTGGATTATATGATTGCCAAACCAGACAGAATGAGCATCTGTACACCTTTGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000036031.13 ENSMUST00000195969.5 ENSMUST00000198014.5 ENSMUST00000198071.5 ENSMUST00000198937.2 |
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