Pregenerated sensors for GRXCR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073574Ensembl transcript IDs: ENSMUST00000097591.5
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGACCTCCTCAGCTTGGATGGCTCTGGAATGAGCATTCTATTTTaGTTGCAGAGGCCCGTGAGAGCCTCCAGTGTTGACTGCCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: KDLLSLDGSGMSILF*LQRPVRASSVDCPF Trigger: GAAGGGGCAGTCAACACTGGAGGCTCTCACGGGCCTCTGCAAGCAAAATAGAATGCTCATTCCAGAGCCATCCAAGCTGAGGAGGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR CCA 90 bp | CGTGCCACAAAAGCAGCCACAGAAGAAGGACCTCCTCAGCTTGGATaGCTCTGGAATGAGCATTCTATTTTGCTTGCAGAGGCCCGTGAG | + |
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Preference number: 1 (lower is better) Translates to: RATKAATEEGPPQLG*LWNEHSILLAEARE Trigger: CTCACGGGCCTCTGCAAGCAAAATAGAATGCTCATTCCAGAGCCATCCAAGCTGAGGAGGTCCTTCTTCTGTGGCTGCTTTTGTGGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 90 bp | CACAGAAGCATTCTAGCTCGTGTCTGGCTAGTAAGCGCTAGAACGTaGCACAAAAGCAGCCACAGAAGAAGGACCTCCTCAGCTTGGATG | + |
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Preference number: 1 (lower is better) Translates to: HRSILARVWLVSART*HKSSHRRRTSSAWM Trigger: CATCCAAGCTGAGGAGGTCCTTCTTCTGTGGCTGCTTTTGTGGCACGTTCTAGCGCTTACTAGCCAGACACGAGCTAGAATGCTTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 90 bp | TGCTGCAGTAGGCTCCCTTTCGGAGAGAGGCAGAAGGAAGCAGGGTaGTATATTAGGAGTAACGTGGTAAGAGAGTACAAGAAAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: CCSRLPFGERQKEAG*YIRSNVVREYKKGT Trigger: TGTGCCTTTCTTGTACTCTCTTACCACGTTACTCCTAATATAGCACCCTGCTTCCTTCTGCCTCTCTCCGAAAGGGAGCCTACTGCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 90 bp | ATGTCATCAGATTTTGTGAGATTTGCTAGTGGTAGAAGTGATTGCTaGTGCAGTAGGCTCCCTTTCGGAGAGAGGCAGAAGGAAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: MSSDFVRFASGRSDC*CSRLPFGERQKEAG Trigger: CCCTGCTTCCTTCTGCCTCTCTCCGAAAGGGAGCCTACTGCAGCAGCAATCACTTCTACCACTAGCAAATCTCACAAAATCTGATGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 90 bp | TGGCTGTGGGGCTGGCAGAAATCTTATCATAGATACGTGCTTGAGTaGCAACCTTCTCCCAATAGCTTTGGTGTGGCTTATAACCTCACC | + |
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Preference number: 1 (lower is better) Translates to: WLWGWQKSYHRYVLE*QPSPNSFGVAYNLT Trigger: GGTGAGGTTATAAGCCACACCAAAGCTATTGGGAGAAGGTTGGCACTCAAGCACGTATCTATGATAAGATTTCTGCCAGCCCCACAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR TCA 90 bp | TGGAGTGTACATTTAGTTATTTGTGCACTGGCGCAAGGGGAAGGCTaGACTAAATCAAGTGAGATGCATGCACATGCTCCTGGAAGGATA | + |
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Preference number: 1 (lower is better) Translates to: WSVHLVICALAQGEG*TKSSEMHAHAPGRI Trigger: TATCCTTCCAGGAGCATGTGCATGCATCTCACTTGATTTAGTTCAGCCTTCCCCTTGCGCCAGTGCACAAATAACTAAATGTACACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR TCA 90 bp | TCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATGAGAGCCTCCAGTGTTaGCTGCCCCTTCCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SHLFIRTIPIARAQPTVDESLQC*LPLPSS Trigger: AGAAGAGGGAAGGGGCAGTCAACACTGGAGGCTCTC...ATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGGATGGCTCTGGAATGAGCATTCTATTTTGCTTGCAGAGGCCCGTGAGACTAAATCAAGTGAGATaGATGCACATGCTCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SLDGSGMSILFCLQRPVRLNQVR*MHMLLE Trigger: TTCCAGGAGCATGTGCATGCATCTCACTTGATTTAG...TCTCACGGGCCTCTGCAAGCAAAATAGAATGCTCATTCCAGAGCCATCCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAGCATTCTAGCTCGTGTCTGGCTAGTAAGCGCTAGAACGTGCCACAAAGCCCCTTCCCTCTTCTaGCTCATTAGAAATTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: HRSILARVWLVSARTCHKAPSLF*LIRNFN Trigger: ATTGAAATTTCTAATGAGGCAGAAGAGGGAAGGGGC...TTTGTGGCACGTTCTAGCGCTTACTAGCCAGACACGAGCTAGAATGCTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR GCA 90 bp | TCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATGGTAGAAGTGATTGCTaGTGCAGTAGGCTCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SHLFIRTIPIARAQPTVDGRSDC*CSRLPF Trigger: GAAAGGGAGCCTACTGCAGCAGCAATCACTTCTACC...ATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR TCA 90 bp | TATTCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGCGCAAGGGGAAGGCTaGACTAAATCAAGTGAGATG | + |
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Preference number: 2 (lower is better) Translates to: YSHLFIRTIPIARAQPTVAQGEG*TKSSEM Trigger: CATCTCACTTGATTTAGTTCAGCCTTCCCCTTGCGC...AACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR CCA 90 bp | CATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATGTATCACGTGCTCATTCGTaGGCTGTAGAAACCATGTCT | + |
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Preference number: 2 (lower is better) Translates to: HLFIRTIPIARAQPTVDVSRAHS*AVETMS Trigger: AGACATGGTTTCTACAGCCCACGAATGAGCACGTGA...TACATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR CAA 90 bp | CTTATCATAGATACGTGCTTGAGTGCCAACCTTCTCCCAATAGCTTaGGTGTGGCTTATAACCTCACCAGTTAGAAATGCACAGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LIIDTCLSANLLPIA*VWLITSPVRNAQKH Trigger: ATGCTTCTGTGCATTTCTAACTGGTGAGGTTATAAGCCACACCAAAGCTATTGGGAGAAGGTTGGCACTCAAGCACGTATCTATGATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAATGGATGGCTCTGGAATaGGCATTCTATTTTGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: FSSRVAIDKPETPAVLSKWMALE*AFYFAC Trigger: GCAAGCAAAATAGAATGCTCATTCCAGAGCCATCCA...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAACAGAAGGAAGCAGGGTaGTATATTAGGAGTAACGTG | + |
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Preference number: 2 (lower is better) Translates to: FSSRVAIDKPETPAVLSKQKEAG*YIRSNV Trigger: CACGTTACTCCTAATATAGCACCCTGCTTCCTTCTG...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR GCA 90 bp | CATGTAGAGATGGTACCAACTTCACAAAATGTCATCAGATTTTGTGAGATTTGCAGTGGTAGAAGTGATTaGTGCTGCAGTAGGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HVEMVPTSQNVIRFCEICSGRSD*CCSRLP Trigger: AGGGAGCCTACTGCAGCAGCAATCACTTCTACCACT...GCAAATCTCACAAAATCTGATGACATTTTGTGAAGTTGGTACCATCTCTACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR CCA 90 bp | CATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATGTAGCATGCACATGCTCCTaGAAGGATAATTTTAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: HLFIRTIPIARAQPTVDVACTCS*KDNFRS Trigger: GCTTCTAAAATTATCCTTCCAGGAGCATGTGCATGC...TACATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR CCA 90 bp | TCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATAATTGGCTGTGGGGCTaGCAGAAATCTTATCATAGA | + |
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Preference number: 2 (lower is better) Translates to: SHLFIRTIPIARAQPTVDNWLWG*QKSYHR Trigger: TCTATGATAAGATTTCTGCCAGCCCCACAGCCAATT...ATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAACAGCTTGGATGGCTCTaGAATGAGCATTCTATTTTG | + |
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Preference number: 2 (lower is better) Translates to: FSSRVAIDKPETPAVLSKQLGWL*NEHSIL Trigger: CAAAATAGAATGCTCATTCCAGAGCCATCCAAGCTG...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR CCA 90 bp | TATTCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTTTTGCTAATTGGCTGTaGGGCTGGCAGAAATCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: YSHLFIRTIPIARAQPTVFANWL*GWQKSY Trigger: ATAAGATTTCTGCCAGCCCCACAGCCAATTAGCAAA...AACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR TCA 90 bp | TCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATTGTCATCAGATTTTGTaGGATTTGCTAGTGGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: SHLFIRTIPIARAQPTVDCHQIL*DLLVVE Trigger: TTCTACCACTAGCAAATCTCACAAAATCTGATGACA...ATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAAATTCTAATTCAAAAATaGCCCTGTCACTTAGGCGCA | + |
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Preference number: 2 (lower is better) Translates to: FSSRVAIDKPETPAVLSKILIQK*PCHLGA Trigger: TGCGCCTAAGTGACAGGGGCATTTTTGAATTAGAAT...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR GCA 90 bp | TATTCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTAAAATGACTTCAACCTaGTGTCTGGAGTGTACATTT | + |
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Preference number: 2 (lower is better) Translates to: YSHLFIRTIPIARAQPTVKMTST*CLECTF Trigger: AAATGTACACTCCAGACAGCAGGTTGAAGTCATTTT...AACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAACTTCAACCTGCTGTCTaGAGTGTACATTTAGTTATT | + |
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Preference number: 2 (lower is better) Translates to: FSSRVAIDKPETPAVLSKLQPAV*SVHLVI Trigger: AATAACTAAATGTACACTCCAGACAGCAGGTTGAAG...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 72 bp | CTCAGCTTGGATGGCTCTGGAATGAGCATTCTATTTTaGTTGCAGAGGCCCGTGAGAGCCTCCAGTGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: LSLDGSGMSILF*LQRPVRASSVD Trigger: GTCAACACTGGAGGCTCTCACGGGCCTCTGCAAGCAAAATAGAATGCTCATTCCAGAGCCATCCAAGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR CCA 72 bp | GCCACAGAAGAAGGACCTCCTCAGCTTGGATGGCTCTaGAATGAGCATTCTATTTTGCTTGCAGAGGCCCGT | + |
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Preference number: 3 (lower is better) Translates to: ATEEGPPQLGWL*NEHSILLAEAR Trigger: ACGGGCCTCTGCAAGCAAAATAGAATGCTCATTCCAGAGCCATCCAAGCTGAGGAGGTCCTTCTTCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 72 bp | AGGCTCCCTTTCGGAGAGAGGCAGAAGGAAGCAGGGTaGTATATTAGGAGTAACGTGGTAAGAGAGTACAAG | + |
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Preference number: 3 (lower is better) Translates to: RLPFGERQKEAG*YIRSNVVREYK Trigger: CTTGTACTCTCTTACCACGTTACTCCTAATATAGCACCCTGCTTCCTTCTGCCTCTCTCCGAAAGGGAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 72 bp | GGCTGTGGGGCTGGCAGAAATCTTATCATAGATACGTaGTTGAGTGCCAACCTTCTCCCAATAGCTTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: GCGAGRNLIIDT*LSANLLPIALV Trigger: CACCAAAGCTATTGGGAGAAGGTTGGCACTCAAGCACGTATCTATGATAAGATTTCTGCCAGCCCCACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 72 bp | GATTTTGTGAGATTTGCTAGTGGTAGAAGTGATTGCTaGTGCAGTAGGCTCCCTTTCGGAGAGAGGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: DFVRFASGRSDC*CSRLPFGERQK Trigger: CTTCTGCCTCTCTCCGAAAGGGAGCCTACTGCAGCAGCAATCACTTCTACCACTAGCAAATCTCACAAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 72 bp | TCAGATTTTGTGAGATTTGCTAGTGGTAGAAGTGATTaGTGCTGCAGTAGGCTCCCTTTCGGAGAGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SDFVRFASGRSD*CCSRLPFGERQ Trigger: CTGCCTCTCTCCGAAAGGGAGCCTACTGCAGCAGCAATCACTTCTACCACTAGCAAATCTCACAAAATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR CCA 72 bp | TTAAGAGGGGAGAGTCTCCCTTCACGTGCTCATTCGTaGGCTGTAGAAACCATGTCTAACTATGAGACCTCT | + |
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Preference number: 3 (lower is better) Translates to: LRGESLPSRAHS*AVETMSNYETS Trigger: AGAGGTCTCATAGTTAGACATGGTTTCTACAGCCCACGAATGAGCACGTGAAGGGAGACTCTCCCCTCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR TCA 72 bp | CATTTAGTTATTTGTGCACTGGCGCAAGGGGAAGGCTaGACTAAATCAAGTGAGATGCATGCACATGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: HLVICALAQGEG*TKSSEMHAHAP Trigger: AGGAGCATGTGCATGCATCTCACTTGATTTAGTTCAGCCTTCCCCTTGCGCCAGTGCACAAATAACTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR CCA 72 bp | TGCTTGAGTGCCAACCTTCTCCCAATAGCTTTGGTGTaGCTTATAACCTCACCAGTTAGAAATGCACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: CLSANLLPIALV*LITSPVRNAQK Trigger: CTTCTGTGCATTTCTAACTGGTGAGGTTATAAGCCACACCAAAGCTATTGGGAGAAGGTTGGCACTCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR-3UTR CAA 90 bp | CATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATGTATCTGACCACATAATTTaGCAAAATAGCTCCCGGCCC | + |
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Preference number: 3 (lower is better) Translates to: HLFIRTIPIARAQPTVDVSDHII*QNSSRP Trigger: GGGCCGGGAGCTATTTTGCAAAATTATGTGGTCAGA...TACATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 72 bp | TTAGAAGCAGTTTCAGAGCGGATTCTAATTCAAAAATaGCCCTGTCACTTAGGCGCATGTAGAGATGGTACC | + |
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Preference number: 3 (lower is better) Translates to: LEAVSERILIQK*PCHLGACRDGT Trigger: GGTACCATCTCTACATGCGCCTAAGTGACAGGGGCATTTTTGAATTAGAATCCGCTCTGAAACTGCTTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR GCA 72 bp | CAAAATAGCTCCCGGCCCGGAAAAATGACTTCAACCTaGTGTCTGGAGTGTACATTTAGTTATTTGTGCACT | + |
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Preference number: 3 (lower is better) Translates to: QNSSRPGKMTST*CLECTFSYLCT Trigger: AGTGCACAAATAACTAAATGTACACTCCAGACAGCAGGTTGAAGTCATTTTTCCGGGCCGGGAGCTATTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR CCA 72 bp | AGCCTGAAACACCTGCTGTCCTTTCTAAAGAGCGGCTaGCTAGATCTTAGTCTTAAAATAGACCTGTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: SLKHLLSFLKSG*LDLSLKIDLSV Trigger: AACAGACAGGTCTATTTTAAGACTAAGATCTAGCCAGCCGCTCTTTAGAAAGGACAGCAGGTGTTTCAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR CCA 72 bp | ACAAACACCGGTGTCATTCTCACTGAGTGTGGAGAGTaGGTGTTCAAGCTGCAAAAGTTCATTAACAAACGT | + |
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Preference number: 3 (lower is better) Translates to: TNTGVILTECGE*VFKLQKFINKR Trigger: ACGTTTGTTAATGAACTTTTGCAGCTTGAACACCCACTCTCCACACTCAGTGAGAATGACACCGGTGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR CCA 72 bp | TGGGCTGTAGAAACCATGTCTAACTATGAGACCTCTTaGTTCTTCTCTTCAAGAGTTGCCATAGATAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: WAVETMSNYETS*FFSSRVAIDKP Trigger: AGGCTTATCTATGGCAACTCTTGAAGAGAAGAACCAAGAGGTCTCATAGTTAGACATGGTTTCTACAGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR TCA 90 bp | CACAGAAGCATTCTAGCTCGTGTCTGGCTAGTAAGCGCTAGAACGTGCCACAAATGCAGGCAGGGCACCTaGGGGCTCGGTAGGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: HRSILARVWLVSARTCHKCRQGT*GLGRTP Trigger: AGGAGTCCTACCGAGCCCTCAGGTGCCCTGCCTGCA...TTTGTGGCACGTTCTAGCGCTTACTAGCCAGACACGAGCTAGAATGCTTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CCA 90 bp | AGCTTGGATGGCTCTGGAATGAGCATTCTATTTTGCTTGCAGAGGCCCGTGAGAAGTACGGCTGGGGCTTaGGGACTTCCCCAGACCCAT | + |
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Preference number: 4 (lower is better) Translates to: SLDGSGMSILFCLQRPVRSTAGA*GLPQTH Trigger: ATGGGTCTGGGGAAGTCCCCAAGCCCCAGCCGTACT...TCTCACGGGCCTCTGCAAGCAAAATAGAATGCTCATTCCAGAGCCATCCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR GCA 90 bp | CATGTAGAGATGGTACCAACTTCACAAAATGTCATCAGATTTTGTGAGATTTGCACTCCGGCAGGGGGCTaGCGTTCCGCTCCGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HVEMVPTSQNVIRFCEICTPAGG*RSAPAG Trigger: CCCTGCCGGAGCGGAACGGCAGCCCCCTGCCGGAGT...GCAAATCTCACAAAATCTGATGACATTTTGTGAAGTTGGTACCATCTCTACATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR GCA 90 bp | CACAGAAGCATTCTAGCTCGTGTCTGGCTAGTAAGCGCTAGAACGTGCCACAAAGCATGGAGAACTTGCTaGCGTGGCACAGAGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: HRSILARVWLVSARTCHKAWRTC*RGTENR Trigger: CCTGTTCTCTGTGCCACGGCAGCAAGTTCTCCATGC...TTTGTGGCACGTTCTAGCGCTTACTAGCCAGACACGAGCTAGAATGCTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR GCA 90 bp | ACCTGCTGTCTGGAGTGTACATTTAGTTATTTGTGCACTGGCGCAAGGGGAAGGCCAGCATGGAGAACTTaGTGCCGTGGCACAGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: TCCLECTFSYLCTGARGRPAWRT*CRGTEN Trigger: GTTCTCTGTGCCACGGCAGCAAGTTCTCCATGCTGG...CCTTCCCCTTGCGCCAGTGCACAAATAACTAAATGTACACTCCAGACAGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CCA 90 bp | TCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATCCAGACCCCTGGCAGTaGAGGCAGTCCTCAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: SHLFIRTIPIARAQPTVDPDPWQ*RQSSGT Trigger: GGTCCCTGAGGACTGCCTCCACTGCCAGGGGTCTGG...ATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR GCA 90 bp | AGCTTGGATGGCTCTGGAATGAGCATTCTATTTTGCTTGCAGAGGCCCGTGAGACAAATTCGGCAAGGTTaGAGGCCATTCTCGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLDGSGMSILFCLQRPVRQIRQG*RPFSLQ Trigger: CTGCAACGAGAATGGCCTGCAACCTTGCCGAATTTG...TCTCACGGGCCTCTGCAAGCAAAATAGAATGCTCATTCCAGAGCCATCCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR TCA 90 bp | CACAGAAGCATTCTAGCTCGTGTCTGGCTAGTAAGCGCTAGAACGTGCCACAAACCATCGGGGTTCGGATaGTTTTCAGGTTGTTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: HRSILARVWLVSARTCHKPSGFG*FSGCWY Trigger: ATACCAACAACCTGAAAATCATCCGAACCCCGATGG...TTTGTGGCACGTTCTAGCGCTTACTAGCCAGACACGAGCTAGAATGCTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR GCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAAGGCAGGGGGCAGCCTTaGTCCCTGTCTCCATCATTC | + |
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Preference number: 4 (lower is better) Translates to: FSSRVAIDKPETPAVLSKGRGQP*SLSPSF Trigger: GAATGATGGAGACAGGGAGCAAGGCTGCCCCCTGCC...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR GCA 90 bp | CTAATTCAAAAATGCCCCTGTCACTTAGGCGCATGTAGAGATGGTACCAACTTCGACTATGAAGAAATGTaGGCTCCGACTCCGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LIQKCPCHLGACRDGTNFDYEEM*APTPAG Trigger: CCCTGCCGGAGTCGGAGCGCACATTTCTTCATAGTC...GAAGTTGGTACCATCTCTACATGCGCCTAAGTGACAGGGGCATTTTTGAATTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAAGGCACAGAGAACAGGTaGCAATGCCAGACCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FSSRVAIDKPETPAVLSKGTENR*QCQTPG Trigger: GCCAGGGGTCTGGCATTGCCACCTGTTCTCTGTGCC...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| 3UTR CAA 72 bp | CCACAAAAGCAGCCACAGAAGAAGGACCTCCTCAGCTaGGATGGCTCTGGAATGAGCATTCTATTTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: PQKQPQKKDLLS*DGSGMSILFCL Trigger: CAAGCAAAATAGAATGCTCATTCCAGAGCCATCCAAGCTGAGGAGGTCCTTCTTCTGTGGCTGCTTTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR TCA 90 bp | TATTCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTTCGCCTTGTAGTCATTaGACAGAGGCTGGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: YSHLFIRTIPIARAQPTVSPCSH*TEAGCP Trigger: CGGGCAGCCAGCCTCTGTTCAATGACTACAAGGCGA...AACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CCA 90 bp | CATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATGTAGAGAACTTGCTGCCGTaGCACAGAGAACAGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: HLFIRTIPIARAQPTVDVENLLP*HREQVA Trigger: TGCCACCTGTTCTCTGTGCCACGGCAGCAAGTTCTC...TACATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR TCA 90 bp | CATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATGTAAATACGCTGATTCTCTaGGCAGTCAGCTTGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HLFIRTIPIARAQPTVDVNTLIL*AVSLGE Trigger: CTCCCCCAAGCTGACTGCTCAGAGAATCAGCGTATT...TACATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CCA 90 bp | CACAGAAGCATTCTAGCTCGTGTCTGGCTAGTAAGCGCTAGAACGTGCCACAAAAAAGTCTATAATGGGTaGAGGCTTATGGTCATTCGC | + |
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Preference number: 4 (lower is better) Translates to: HRSILARVWLVSARTCHKKVYNG*RLMVIR Trigger: GCGAATGACCATAAGCCTCCACCCATTATAGACTTT...TTTGTGGCACGTTCTAGCGCTTACTAGCCAGACACGAGCTAGAATGCTTCTGTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR GCA 90 bp | CATGTAGAGATGGTACCAACTTCACAAAATGTCATCAGATTTTGTGAGATTTGCGAGAACAGGTGGCAATaGCAGACCCCTGGCAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: HVEMVPTSQNVIRFCEICENRWQ*QTPGSG Trigger: TCCACTGCCAGGGGTCTGGCATTGCCACCTGTTCTC...GCAAATCTCACAAAATCTGATGACATTTTGTGAAGTTGGTACCATCTCTACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR GCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAACCATCCTCAAAAACCTaGTTCAACACTCGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: FSSRVAIDKPETPAVLSKPSSKT*FNTRPL Trigger: CAGTGGCCGAGTGTTGAAGCAGGTTTTTGAGGATGG...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR GCA 90 bp | TCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATGGCGACTCTAATTCTTaGCCATCCTCAAAAACCTGC | + |
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Preference number: 4 (lower is better) Translates to: SHLFIRTIPIARAQPTVDGDSNS*PSSKTC Trigger: GCAGGTTTTTGAGGATGGGCAAGAATTAGAGTCGCC...ATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR TCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAAGGAGGATTTTCCTCATaGAGTCCCTTTTGTCCATCG | + |
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Preference number: 4 (lower is better) Translates to: FSSRVAIDKPETPAVLSKGGFSS*SPFCPS Trigger: CGATGGACAAAAGGGACTTCATGAGGAAAATCCTCC...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CCA 90 bp | ACCTGTCTGTTTGCTAATTGGCTGTGGGGCTGGCAGAAATCTTATCATAGATACGAGGATATTCTTCTTTaGGCGACTCTAATTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: TCLFANWLWGWQKSYHRYEDILL*ATLILA Trigger: GGCAAGAATTAGAGTCGCCCAAAGAAGAATATCCTC...GTATCTATGATAAGATTTCTGCCAGCCCCACAGCCAATTAGCAAACAGACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR TCA 90 bp | TTCTCTTCAAGAGTTGCCATAGATAAGCCTGAAACACCTGCTGTCCTTTCTAAATCCTGGAGAAAACTGTaGGGATATTCTTCTTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FSSRVAIDKPETPAVLSKSWRKL*GYSSLG Trigger: GCCCAAAGAAGAATATCCTCACAGTTTTCTCCAGGA...TTTAGAAAGGACAGCAGGTGTTTCAGGCTTATCTATGGCAACTCTTGAAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CAA 90 bp | ACCTGCTGTCTGGAGTGTACATTTAGTTATTTGTGCACTGGCGCAAGGGGAAGGCGGCAGGGGGCAGCCTaGCTCCCTGTCTCCATCATT | + |
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Preference number: 5 (lower is better) Translates to: TCCLECTFSYLCTGARGRRQGAA*LPVSII Trigger: AATGATGGAGACAGGGAGCAAGGCTGCCCCCTGCCG...CCTTCCCCTTGCGCCAGTGCACAAATAACTAAATGTACACTCCAGACAGCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CAA 90 bp | CACAGAAGCATTCTAGCTCGTGTCTGGCTAGTAAGCGCTAGAACGTGCCACAAAGCCAGCATGGAGAACTaGCTGCCGTGGCACAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: HRSILARVWLVSARTCHKASMEN*LPWHRE Trigger: TTCTCTGTGCCACGGCAGCAAGTTCTCCATGCTGGC...TTTGTGGCACGTTCTAGCGCTTACTAGCCAGACACGAGCTAGAATGCTTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CAA 90 bp | AGCTTGGATGGCTCTGGAATGAGCATTCTATTTTGCTTGCAGAGGCCCGTGAGACTCATGAAGTCCCTTTaGTCCATCGGGGTTCGGATG | + |
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Preference number: 5 (lower is better) Translates to: SLDGSGMSILFCLQRPVRLMKSL*SIGVRM Trigger: CATCCGAACCCCGATGGACAAAAGGGACTTCATGAG...TCTCACGGGCCTCTGCAAGCAAAATAGAATGCTCATTCCAGAGCCATCCAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CAA 90 bp | TCACATCTTTTTATTAGAACTATTCCTATTGCCCGGGCGCAACCCACTGTTGATCATAAACGCCATCCATaGGTTCAAGGGCCTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SHLFIRTIPIARAQPTVDHKRHP*VQGPPG Trigger: TCCAGGAGGCCCTTGAACCAATGGATGGCGTTTATG...ATCAACAGTGGGTTGCGCCCGGGCAATAGGAATAGTTCTAATAAAAAGATGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS CCA 90 bp | TTGGTTCAAGGGCCTCCTGGAGAAAACTGTGAGGATATTCTTCTTTaGGCGACTCTAATTCTTGCCCATCCTCAAAAACCTGCTTCAACA | + |
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Preference number: 5 (lower is better) Translates to: LVQGPPGENCEDILL*ATLILAHPQKPAST Trigger: TGTTGAAGCAGGTTTTTGAGGATGGGCAAGAATTAGAGTCGCCCAAAGAAGAATATCCTCACAGTTTTCTCCAGGAGGCCCTTGAACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CAA 90 bp | CTAATTCAAAAATGCCCCTGTCACTTAGGCGCATGTAGAGATGGTACCAACTTCAGCCACATCTTCCTTTaGGAGGATTTTCCTCATGAA | + |
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Preference number: 5 (lower is better) Translates to: LIQKCPCHLGACRDGTNFSHIFL*EDFPHE Trigger: TTCATGAGGAAAATCCTCCAAAAGGAAGATGTGGCT...GAAGTTGGTACCATCTCTACATGCGCCTAAGTGACAGGGGCATTTTTGAATTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS-3UTR CAA 90 bp | CATGTAGAGATGGTACCAACTTCACAAAATGTCATCAGATTTTGTGAGATTTGCGCAAATTCGGCAAGGTaGCAGGCCATTCTCGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: HVEMVPTSQNVIRFCEICANSAR*QAILVA Trigger: TGCAACGAGAATGGCCTGCAACCTTGCCGAATTTGC...GCAAATCTCACAAAATCTGATGACATTTTGTGAAGTTGGTACCATCTCTACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS CCA 90 bp | CAGGTTGTTGGTATAGATAATTATCTTCCCAAAGTCTATAATGGGTaGAGGCTTATGGTCATTCGCCTTGTAGTCATTGAACAGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: QVVGIDNYLPKVYNG*RLMVIRLVVIEQRL Trigger: CAGCCTCTGTTCAATGACTACAAGGCGAATGACCATAAGCCTCCACCCATTATAGACTTTGGGAAGATAATTATCTATACCAACAACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS CCA 72 bp | CCGTGGCACAGAGAACAGGTGGCAATGCCAGACCCCTaGCAGTGGAGGCAGTCCTCAGGGACCAACCCATCC | + |
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Preference number: 6 (lower is better) Translates to: PWHREQVAMPDP*QWRQSSGTNPS Trigger: GGATGGGTTGGTCCCTGAGGACTGCCTCCACTGCCAGGGGTCTGGCATTGCCACCTGTTCTCTGTGCCACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS GCA 72 bp | CCAACCCATCCTGTGTGTGCTGACTATGAAGAAATGTaGGCTCCGACTCCGGCAGGGGGCTGCCGTTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PTHPVCADYEEM*APTPAGGCRSA Trigger: AGCGGAACGGCAGCCCCCTGCCGGAGTCGGAGCGCACATTTCTTCATAGTCAGCACACACAGGATGGGTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS CCA 72 bp | GCATGGAGAACTTGCTGCCGTGGCACAGAGAACAGGTaGCAATGCCAGACCCCTGGCAGTGGAGGCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: AWRTCCRGTENR*QCQTPGSGGSP Trigger: AGGACTGCCTCCACTGCCAGGGGTCTGGCATTGCCACCTGTTCTCTGTGCCACGGCAGCAAGTTCTCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS TCA 72 bp | TGGGTGGAGGCTTATGGTCATTCGCCTTGTAGTCATTaGACAGAGGCTGGCTGCCCGCCAGAGTGTAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: WVEAYGHSPCSH*TEAGCPPECRR Trigger: GCGCCTACACTCTGGCGGGCAGCCAGCCTCTGTTCAATGACTACAAGGCGAATGACCATAAGCCTCCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS CCA 72 bp | TTGAATCTGTTAGCCAGCATGGAGAACTTGCTGCCGTaGCACAGAGAACAGGTGGCAATGCCAGACCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LNLLASMENLLP*HREQVAMPDPW Trigger: CCAGGGGTCTGGCATTGCCACCTGTTCTCTGTGCCACGGCAGCAAGTTCTCCATGCTGGCTAACAGATTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS CCA 72 bp | GGGCCTCCTGGAGAAAACTGTGAGGATATTCTTCTTTaGGCGACTCTAATTCTTGCCCATCCTCAAAAACCT | + |
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Preference number: 6 (lower is better) Translates to: GPPGENCEDILL*ATLILAHPQKP Trigger: AGGTTTTTGAGGATGGGCAAGAATTAGAGTCGCCCAAAGAAGAATATCCTCACAGTTTTCTCCAGGAGGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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| CDS CAA 72 bp | GATCATCAGGGACGCTTCCTCAGCCACATCTTCCTTTaGGAGGATTTTCCTCATGAAGTCCCTTTTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: DHQGRFLSHIFL*EDFPHEVPFVH Trigger: ATGGACAAAAGGGACTTCATGAGGAAAATCCTCCAAAAGGAAGATGTGGCTGAGGAAGCGTCCCTGATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097591.5 |
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