Pregenerated sensors for GRXCR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068082Ensembl transcript IDs: ENSMUST00000094715.9
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTGTCCATCTTCATAGACCTCTTTCAGAACTCTCCCACTGTGAGATaGGGCAATTCGAAACCGGACTTTCCGTGGCCTGTCACTTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LSIFIDLFQNSPTVR*GNSKPDFPWPVTFW Trigger: CCAGAAAGTGACAGGCCACGGAAAGTCCGGTTTCGAATTGCCTCATCTCACAGTGGGAGAGTTCTGAAAGAGGTCTATGAAGATGGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS TCA 90 bp | AAAGCCTTCTCGCTGGCTGTCCTGGCTAATACCAGCAGGTTATCCTaGTCTTTCTCCTGTTCATTATCCTCTGATCCAATGTGGCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: KAFSLAVLANTSRLS*SFSCSLSSDPMWPF Trigger: AAACGGCCACATTGGATCAGAGGATAATGAACAGGAGAAAGATCAGGATAACCTGCTGGTATTAGCCAGGACAGCCAGCGAGAAGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CCA 90 bp | GCTGATGGCTGCTGCAACACTTTGGTCAAATTGTTAAACAGAGCCTaGCCAGCACTCACTTTGTACTTGACGCCTCTGACTGTACCATTT | + |
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Preference number: 5 (lower is better) Translates to: ADGCCNTLVKLLNRA*PALTLYLTPLTVPF Trigger: AAATGGTACAGTCAGAGGCGTCAAGTACAAAGTGAGTGCTGGCCAGGCTCTGTTTAACAATTTGACCAAAGTGTTGCAGCAGCCATCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS GCA 90 bp | ATCTATGGCACAAATACTAGCACATTCAGAATCCAGAGAGCCTGGTaGTTGTCCATCTTCATAGACCTCTTTCAGAACTCTCCCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: IYGTNTSTFRIQRAW*LSIFIDLFQNSPTV Trigger: CACAGTGGGAGAGTTCTGAAAGAGGTCTATGAAGATGGACAAGCACCAGGCTCTCTGGATTCTGAATGTGCTAGTATTTGTGCCATAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CCA 90 bp | CTCCACAGGAAGGACACTCGTGCGGATGCTGGACCCTCTCAATTTTaGTTAAAAGGTCTTGCAGTTCTCCTGATTCATTCATTGACAAAA | + |
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Preference number: 5 (lower is better) Translates to: LHRKDTRADAGPSQF*LKGLAVLLIHSLTK Trigger: TTTTGTCAATGAATGAATCAGGAGAACTGCAAGACCTTTTAACCAAAATTGAGAGGGTCCAGCATCCGCACGAGTGTCCTTCCTGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS GCA 72 bp | AGACAACAGGAAGGGAAGGAGCTTCGGAGACTCTCCTaGACCGTTCATCCAACTCTTTCCCATAGTCACCGT | + |
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Preference number: 6 (lower is better) Translates to: RQQEGKELRRLS*TVHPTLSHSHR Trigger: ACGGTGACTATGGGAAAGAGTTGGATGAACGGTGCAGGAGAGTCTCCGAAGCTCCTTCCCTTCCTGTTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS GCA 72 bp | GGAAGGAAGCCAAAGCCTCCACAGGAAGGACACTCGTaGGGATGCTGGACCCTCTCAATTTTGGTTAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GRKPKPPQEGHS*GCWTLSILVKR Trigger: CCTTTTAACCAAAATTGAGAGGGTCCAGCATCCGCACGAGTGTCCTTCCTGTGGAGGCTTTGGCTTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 90 bp | CCAGTTCGCATCTCTCGAAGGTCGTCCTCACCACACGAAGGCAGGTaGTATAAATTACCACACGGTCAAATTCCAGGTCAGCTGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: PVRISRRSSSPHEGR*YKLPHGQIPGQLMA Trigger: AGCCATCAGCTGACCTGGAATTTGACCGTGTGGTAATTTATACAACCTGCCTTCGTGTGGTGAGGACGACCTTCGAGAGATGCGAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS GCA 72 bp | AAGCCAAAGCCTCCACAGGAAGGACACTCGTGCGGATaGTGGACCCTCTCAATTTTGGTTAAAAGGTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: KPKPPQEGHSCG*WTLSILVKRSC Trigger: GCAAGACCTTTTAACCAAAATTGAGAGGGTCCAGCATCCGCACGAGTGTCCTTCCTGTGGAGGCTTTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS TCA 72 bp | TTCATAGACCTCTTTCAGAACTCTCCCACTGTGAGATaGGGCAATTCGAAACCGGACTTTCCGTGGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: FIDLFQNSPTVR*GNSKPDFPWPV Trigger: GACAGGCCACGGAAAGTCCGGTTTCGAATTGCCTCATCTCACAGTGGGAGAGTTCTGAAAGAGGTCTATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CCA 72 bp | CTCTTCTTGTGCCAAAAGCCTTCTCGCTGGCTGTCCTaGCTAATACCAGCAGGTTATCCTGATCTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LFLCQKPSRWLS*LIPAGYPDLSP Trigger: AGGAGAAAGATCAGGATAACCTGCTGGTATTAGCCAGGACAGCCAGCGAGAAGGCTTTTGGCACAAGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 72 bp | CAGGTGCAGTTCTTACAACGCTGGAGACCATTCTCATaGCAAGCTGTACACTTGAGGGCTTTGAAAGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: QVQFLQRWRPFS*QAVHLRALKAS Trigger: GGACGCTTTCAAAGCCCTCAAGTGTACAGCTTGCAATGAGAATGGTCTCCAGCGTTGTAAGAACTGCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS GCA 72 bp | TCCTGTTCATTATCCTCTGATCCAATGTGGCCGTTTTaGTGTCCCTCAGAGTCACTTAGCCCATCTATGGCA | + |
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Preference number: 6 (lower is better) Translates to: SCSLSSDPMWPF*CPSESLSPSMA Trigger: TGCCATAGATGGGCTAAGTGACTCTGAGGGACAGCAAAACGGCCACATTGGATCAGAGGATAATGAACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 72 bp | AGGTCAGCTGATGGCTGCTGCAACACTTTGGTCAAATaGTTAAACAGAGCCTGGCCAGCACTCACTTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: RSADGCCNTLVK*LNRAWPALTLY Trigger: GTACAAAGTGAGTGCTGGCCAGGCTCTGTTTAACAATTTGACCAAAGTGTTGCAGCAGCCATCAGCTGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 72 bp | ATCTCTCGAAGGTCGTCCTCACCACACGAAGGCAGGTaGTATAAATTACCACACGGTCAAATTCCAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: ISRRSSSPHEGR*YKLPHGQIPGQ Trigger: CTGACCTGGAATTTGACCGTGTGGTAATTTATACAACCTGCCTTCGTGTGGTGAGGACGACCTTCGAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 90 bp | TCAAATTCCAGGTCAGCTGATGGCTGCTGCAACACTTTGGTCAAATaGTTAAACAGAGCCTGGCCAGCACTCACTTTGTACTTGACGCCT | + |
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Preference number: 6 (lower is better) Translates to: SNSRSADGCCNTLVK*LNRAWPALTLYLTP Trigger: AGGCGTCAAGTACAAAGTGAGTGCTGGCCAGGCTCTGTTTAACAATTTGACCAAAGTGTTGCAGCAGCCATCAGCTGACCTGGAATTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 90 bp | CCTCCACAGGAAGGACACTCGTGCGGATGCTGGACCCTCTCAATTTaGGTTAAAAGGTCTTGCAGTTCTCCTGATTCATTCATTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: PPQEGHSCGCWTLSI*VKRSCSSPDSFIDK Trigger: TTTGTCAATGAATGAATCAGGAGAACTGCAAGACCTTTTAACCAAAATTGAGAGGGTCCAGCATCCGCACGAGTGTCCTTCCTGTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS TCA 72 bp | TCGCTGGCTGTCCTGGCTAATACCAGCAGGTTATCCTaGTCTTTCTCCTGTTCATTATCCTCTGATCCAATG | + |
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Preference number: 6 (lower is better) Translates to: SLAVLANTSRLS*SFSCSLSSDPM Trigger: CATTGGATCAGAGGATAATGAACAGGAGAAAGATCAGGATAACCTGCTGGTATTAGCCAGGACAGCCAGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CCA 72 bp | TGCTGCAACACTTTGGTCAAATTGTTAAACAGAGCCTaGCCAGCACTCACTTTGTACTTGACGCCTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: CCNTLVKLLNRA*PALTLYLTPLT Trigger: AGTCAGAGGCGTCAAGTACAAAGTGAGTGCTGGCCAGGCTCTGTTTAACAATTTGACCAAAGTGTTGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 72 bp | GAAGGACACTCGTGCGGATGCTGGACCCTCTCAATTTaGGTTAAAAGGTCTTGCAGTTCTCCTGATTCATTC | + |
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Preference number: 6 (lower is better) Translates to: EGHSCGCWTLSI*VKRSCSSPDSF Trigger: GAATGAATCAGGAGAACTGCAAGACCTTTTAACCAAAATTGAGAGGGTCCAGCATCCGCACGAGTGTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CCA 72 bp | AAGGACACTCGTGCGGATGCTGGACCCTCTCAATTTTaGTTAAAAGGTCTTGCAGTTCTCCTGATTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: KDTRADAGPSQF*LKGLAVLLIHS Trigger: TGAATGAATCAGGAGAACTGCAAGACCTTTTAACCAAAATTGAGAGGGTCCAGCATCCGCACGAGTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 72 bp | GTCAAATTGTTAAACAGAGCCTGGCCAGCACTCACTTaGTACTTGACGCCTCTGACTGTACCATTTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: VKLLNRAWPALT*YLTPLTVPFLL Trigger: AAGCAAAAATGGTACAGTCAGAGGCGTCAAGTACAAAGTGAGTGCTGGCCAGGCTCTGTTTAACAATTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 72 bp | TTGTTAAACAGAGCCTGGCCAGCACTCACTTTGTACTaGACGCCTCTGACTGTACCATTTTTGCTTAAAATG | + |
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Preference number: 6 (lower is better) Translates to: LLNRAWPALTLY*TPLTVPFLLKM Trigger: CATTTTAAGCAAAAATGGTACAGTCAGAGGCGTCAAGTACAAAGTGAGTGCTGGCCAGGCTCTGTTTAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 90 bp | TTGGTCAAATTGTTAAACAGAGCCTGGCCAGCACTCACTTTGTACTaGACGCCTCTGACTGTACCATTTTTGCTTAAAATGTTGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: LVKLLNRAWPALTLY*TPLTVPFLLKMLTL Trigger: AAGAGTCAACATTTTAAGCAAAAATGGTACAGTCAGAGGCGTCAAGTACAAAGTGAGTGCTGGCCAGGCTCTGTTTAACAATTTGACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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| CDS CAA 90 bp | AACACTTTGGTCAAATTGTTAAACAGAGCCTGGCCAGCACTCACTTaGTACTTGACGCCTCTGACTGTACCATTTTTGCTTAAAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: NTLVKLLNRAWPALT*YLTPLTVPFLLKML Trigger: CAACATTTTAAGCAAAAATGGTACAGTCAGAGGCGTCAAGTACAAAGTGAGTGCTGGCCAGGCTCTGTTTAACAATTTGACCAAAGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094715.9 |
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