Pregenerated sensors for GRWD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053801Ensembl transcript IDs: ENSMUST00000107723.9, ENSMUST00000131384.3, ENSMUST00000209484.2, ENSMUST00000211265.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCAGGAACCACCCTCCGTGGGTGTCCAGAGGTGGACGTTCTTCTaGCAGTCACCAGTCAGCAAGCGGCCGGGCACCCGAGGGGACCAG | + |
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Preference number: 1 (lower is better) Translates to: FQEPPSVGVQRWTFF*QSPVSKRPGTRGDQ Trigger: CTGGTCCCCTCGGGTGCCCGGCCGCTTGCTGACTGGTGACTGTCAGAAGAACGTCCACCTCTGGACACCCACGGAGGGTGGTTCCTGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR GCA 90 bp | TCATCTCGGAGGAAGATGGCCAGGGCCTGGGGGTCATCCACCACCTaGAGGAGCCGCCGCAGTGCGAACACCTCCACTTGGCCCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: SSRRKMARAWGSSTT*RSRRSANTSTWPFS Trigger: AGAGAAGGGCCAAGTGGAGGTGTTCGCACTGCGGCGGCTCCTGCAGGTGGTGGATGACCCCCAGGCCCTGGCCATCTTCCTCCGAGATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | GGTTTTATTCGGGCCTGCTCATCTCGGAGGAAGATGGCCAGGGCCTaGGGGTCATCCACCACCTGCAGGAGCCGCCGCAGTGCGAACACC | + |
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Preference number: 1 (lower is better) Translates to: GFIRACSSRRKMARA*GSSTTCRSRRSANT Trigger: GGTGTTCGCACTGCGGCGGCTCCTGCAGGTGGTGGATGACCCCCAGGCCCTGGCCATCTTCCTCCGAGATGAGCAGGCCCGAATAAAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | GGGCACTGTGGGTGCCAGTGTAGCTCCTTCAGGTCAGTCTCACCTTaGTGCACGAACAGCAACTGCTGGGGGAGTGCCGCCAGCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: GHCGCQCSSFRSVSP*CTNSNCWGSAASPG Trigger: CCCTGGGCTGGCGGCACTCCCCCAGCAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCTGAAGGAGCTACACTGGCACCCACAGTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR TCA 90 bp | CTGCAGGAGCCGCCGCAGTGCGAACACCTCCACTTGGCCCTTCTCTaGCCATACTCCAGCCACAGGTTCCTCCCCCAGCCAAGATACCCG | + |
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Preference number: 1 (lower is better) Translates to: LQEPPQCEHLHLALL*PYSSHRFLPQPRYP Trigger: CGGGTATCTTGGCTGGGGGAGGAACCTGTGGCTGGAGTATGGTCAGAGAAGGGCCAAGTGGAGGTGTTCGCACTGCGGCGGCTCCTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR TCA 90 bp | GTGTTGGCCACCTCAAACACTGATGGTGCGGAAGACGGTGAAGCCTaGCAGGGCGGTGCTGATCAGGACCCCCGGGCACTGTGGGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: VLATSNTDGAEDGEA*QGGADQDPRALWVP Trigger: TGGCACCCACAGTGCCCGGGGGTCCTGATCAGCACCGCCCTGTCAGGCTTCACCGTCTTCCGCACCATCAGTGTTTGAGGTGGCCAACAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | TCATCCACCACCTGCAGGAGCCGCCGCAGTGCGAACACCTCCACTTaGCCCTTCTCTGACCATACTCCAGCCACAGGTTCCTCCCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: SSTTCRSRRSANTST*PFSDHTPATGSSPS Trigger: GCTGGGGGAGGAACCTGTGGCTGGAGTATGGTCAGAGAAGGGCCAAGTGGAGGTGTTCGCACTGCGGCGGCTCCTGCAGGTGGTGGATGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | GGGGAGTGCCGCCAGCCCAGGGTCTGTCTCTGTCTCCCCCGACTCTaGGTCCCGTTCAACTGCCAGGTCCCATTGTGTGATCTGGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: GECRQPRVCLCLPRL*VPFNCQVPLCDLVV Trigger: GACAACCAGATCACACAATGGGACCTGGCAGTTGAACGGGACCCAGAGTCGGGGGAGACAGAGACAGACCCTGGGCTGGCGGCACTCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | AGCTCCTTCAGGTCAGTCTCACCTTGGTGCACGAACAGCAACTGCTaGGGGAGTGCCGCCAGCCCAGGGTCTGTCTCTGTCTCCCCCGAC | + |
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Preference number: 1 (lower is better) Translates to: SSFRSVSPWCTNSNC*GSAASPGSVSVSPD Trigger: GTCGGGGGAGACAGAGACAGACCCTGGGCTGGCGGCACTCCCCCAGCAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCTGAAGGAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR GCA 90 bp | CACTGTGGGTGCCAGTGTAGCTCCTTCAGGTCAGTCTCACCTTGGTaGACGAACAGCAACTGCTGGGGGAGTGCCGCCAGCCCAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: HCGCQCSSFRSVSPW*TNSNCWGSAASPGS Trigger: AGACCCTGGGCTGGCGGCACTCCCCCAGCAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCTGAAGGAGCTACACTGGCACCCACAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR GCA 90 bp | AAGCCTGACAGGGCGGTGCTGATCAGGACCCCCGGGCACTGTGGGTaGCAGTGTAGCTCCTTCAGGTCAGTCTCACCTTGGTGCACGAAC | + |
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Preference number: 1 (lower is better) Translates to: KPDRAVLIRTPGHCG*QCSSFRSVSPWCTN Trigger: GTTCGTGCACCAAGGTGAGACTGACCTGAAGGAGCTACACTGGCACCCACAGTGCCCGGGGGTCCTGATCAGCACCGCCCTGTCAGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | CACTGCAGATCCTCCACAGACCGTGTGTGGCCCACAAACGGCCTCTaGTCCACATTCCAGGAACCACCCTCCGTGGGTGTCCAGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: HCRSSTDRVWPTNGL*STFQEPPSVGVQRW Trigger: CCACCTCTGGACACCCACGGAGGGTGGTTCCTGGAATGTGGACCAGAGGCCGTTTGTGGGCCACACACGGTCTGTGGAGGATCTGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR TCA 90 bp | TCTCCCCCGACTCTGGGTCCCGTTCAACTGCCAGGTCCCATTGTGTaGTCTGGTTGTCAGCACCTGAGGCTGCGAAGACCCCACTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: SPPTLGPVQLPGPIV*SGCQHLRLRRPHCP Trigger: AGGACAGTGGGGTCTTCGCAGCCTCAGGTGCTGACAACCAGATCACACAATGGGACCTGGCAGTTGAACGGGACCCAGAGTCGGGGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR GCA 90 bp | TCAGCAGAGCAGGAGGCAAACACCGTGTCCTCAGTTGGTGACCACTaGAGATCCTCCACAGACCGTGTGTGGCCCACAAACGGCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SAEQEANTVSSVGDH*RSSTDRVWPTNGLW Trigger: CCAGAGGCCGTTTGTGGGCCACACACGGTCTGTGGAGGATCTGCAGTGGTCACCAACTGAGGACACGGTGTTTGCCTCCTGCTCTGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR CCA 90 bp | GGCCCACAAACGGCCTCTGGTCCACATTCCAGGAACCACCCTCCGTaGGTGTCCAGAGGTGGACGTTCTTCTGACAGTCACCAGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GPQTASGPHSRNHPP*VSRGGRSSDSHQSA Trigger: TGCTGACTGGTGACTGTCAGAAGAACGTCCACCTCTGGACACCCACGGAGGGTGGTTCCTGGAATGTGGACCAGAGGCCGTTTGTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR CCA 90 bp | GTGTCCTCAGTTGGTGACCACTGCAGATCCTCCACAGACCGTGTGTaGCCCACAAACGGCCTCTGGTCCACATTCCAGGAACCACCCTCC | + |
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Preference number: 1 (lower is better) Translates to: VSSVGDHCRSSTDRV*PTNGLWSTFQEPPS Trigger: GGAGGGTGGTTCCTGGAATGTGGACCAGAGGCCGTTTGTGGGCCACACACGGTCTGTGGAGGATCTGCAGTGGTCACCAACTGAGGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR TCA 90 bp | CTCCAGCCACAGGTTCCTCCCCCAGCCAAGATACCCGAACTCGGTTaGTGCCACCGTAGTGAGGAACCATGGCCAGTTCCAGCTGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: LQPQVPPPAKIPELG*CHRSEEPWPVPAEV Trigger: AACCTCAGCTGGAACTGGCCATGGTTCCTCACTACGGTGGCATCAACCGAGTTCGGGTATCTTGGCTGGGGGAGGAACCTGTGGCTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | ATCTCCATCATGGGCAGTGGCTGTGGTGAGCATGCAGGCCTTGCCTaGGGCTGCTCGGATGTCCCAGATGCGAATAGAGGCATCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: ISIMGSGCGEHAGLA*GCSDVPDANRGISR Trigger: TCTGCTGATGCCTCTATTCGCATCTGGGACATCCGAGCAGCCCCAGGCAAGGCCTGCATGCTCACCACAGCCACTGCCCATGATGGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR TCA 90 bp | CCGTTCAACTGCCAGGTCCCATTGTGTGATCTGGTTGTCAGCACCTaGGGCTGCGAAGACCCCACTGTCCTGAGGGTGCCATTCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: PFNCQVPLCDLVVST*GCEDPTVLRVPFNR Trigger: TCTGTTGAATGGCACCCTCAGGACAGTGGGGTCTTCGCAGCCTCAGGTGCTGACAACCAGATCACACAATGGGACCTGGCAGTTGAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | AACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCAAGTGTTaGCCACCTCAAACACTGATGGTGCGGAAGACGGTGAAGCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: NRSSSHVEPSLEAKC*PPQTLMVRKTVKPD Trigger: GTCAGGCTTCACCGTCTTCCGCACCATCAGTGTTTGAGGTGGCCAACACTTGGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR TCA 90 bp | TCCTTGGGGTCAAGCCAGGAGTCAACACTGACAAAAATCTCATCCTaGGGCCGTATCTGGGACAGGCAAGGATCTTTGCCTGCACCTAGT | + |
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Preference number: 1 (lower is better) Translates to: SLGSSQESTLTKISS*GRIWDRQGSLPAPS Trigger: ACTAGGTGCAGGCAAAGATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGACTCCTGGCTTGACCCCAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | ACAGTAGTGGTCAGCACAGGAGGGCACCCCAGATGGCTCCCTACTTaGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATT | + |
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Preference number: 1 (lower is better) Translates to: TVVVSTGGHPRWLPT*ISTKSNWPEGRERI Trigger: AATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAGTAGGGAGCCATCTGGGGTGCCCTCCTGTGCTGACCACTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | ACCCTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATTAGGTCCCTaGTCAGAGGTCCTTGGGGTCAAGCCAGGAGTCAACACTGACAAA | + |
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Preference number: 1 (lower is better) Translates to: TLKVPEVDQQPELGP*SEVLGVKPGVNTDK Trigger: TTTGTCAGTGTTGACTCCTGGCTTGACCCCAAGGACCTCTGACCAGGGACCTAATTCTGGCTGTTGATCAACTTCAGGAACTTTAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR CCA 90 bp | GCAGAGAGAGAATTAAATTCCACTGGAGTGACACAGACCCAGACTTaGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAA | + |
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Preference number: 1 (lower is better) Translates to: AERELNSTGVTQTQT*PSYGKTLKVPEVDQ Trigger: TTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAATTCTCTCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR CAA 90 bp | GTGGCCACAGGGGAGCCAGACTTAAACTGTCGCAGGTCCCAGACTTaGAGGGCACCATCATCCCCACCGCTGAGCAGGAAGGGCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VATGEPDLNCRRSQT*RAPSSPPLSRKGSL Trigger: CAGGGAGCCCTTCCTGCTCAGCGGTGGGGATGATGGTGCCCTCAAAGTCTGGGACCTGCGACAGTTTAAGTCTGGCTCCCCTGTGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGTCCAGAGGTGGACGTTCTTCTGACAGTCACCAGTCAGCAAGCGGCCGGAGGGTGACGGCCTGGTaGCATGGAGATTGTGCATCC | + |
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Preference number: 2 (lower is better) Translates to: WVSRGGRSSDSHQSASGRRVTAW*HGDCAS Trigger: GGATGCACAATCTCCATGGCACCAGGCCGTCACCCT...CCGGCCGCTTGCTGACTGGTGACTGTCAGAAGAACGTCCACCTCTGGACACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR GCA 90 bp | TCACCAGTCAGCAAGCGGCCGGGCACCCGAGGGGACCAGTCAAGAGCAAAGCCCACAGGCAAGGATCTTTaGCTGCACCTAGTCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SPVSKRPGTRGDQSRAKPTGKDL*LHLVFG Trigger: ACCAAAGACTAGGTGCAGGCAAAGATCCTTGCCTGT...GGGCTTTGCTCTTGACTGGTCCCCTCGGGTGCCCGGCCGCTTGCTGACTGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCCGACTCTGGGTCCCGTTCAACTGCCAGGTCCCATTGTGTGATCTGGTTGGAGGGCACCCCAGATaGCTCCCTACTTGGATCTCA | + |
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Preference number: 2 (lower is better) Translates to: LPRLWVPFNCQVPLCDLVGGHPR*LPTWIS Trigger: TGAGATCCAAGTAGGGAGCCATCTGGGGTGCCCTCC...AACCAGATCACACAATGGGACCTGGCAGTTGAACGGGACCCAGAGTCGGGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR TCA 90 bp | GACTTAAACTGTCGCAGGTCCCAGACTTTGAGGGCACCATCATCCCCACCGCTGCACTTGGCCCTTCTCTaGCCATACTCCAGCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: DLNCRRSQTLRAPSSPPLHLALL*PYSSHR Trigger: CCTGTGGCTGGAGTATGGTCAGAGAAGGGCCAAGTG...CAGCGGTGGGGATGATGGTGCCCTCAAAGTCTGGGACCTGCGACAGTTTAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGAGGGCACCATCATCCCCACCGCTGAGCAGGAAGGGCTCCCTGCGGCTCCAGCAAAGGAGAAGATaGGTTTTATTCGGGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TLRAPSSPPLSRKGSLRLQQRRR*VLFGPA Trigger: AGCAGGCCCGAATAAAACCCATCTTCTCCTTTGCTG...GAGCCGCAGGGAGCCCTTCCTGCTCAGCGGTGGGGATGATGGTGCCCTCAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR CAA 90 bp | TTAACATCTCCATCATGGGCAGTGGCTGTGGTGAGCATGCAGGCCTaGCCTGGGGCTGCTCGGATGTCCCAGATGCGAATAGAGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: LTSPSWAVAVVSMQA*PGAARMSQMRIEAS Trigger: TGATGCCTCTATTCGCATCTGGGACATCCGAGCAGCCCCAGGCAAGGCCTGCATGCTCACCACAGCCACTGCCCATGATGGAGATGTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR CAA 90 bp | ACTGTCCTGAGGGTGCCATTCAACAGAGGTCACGGGGGCCATATGTaGCTTGAAGGTGGCCACAGGGGAGCCAGACTTAAACTGTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: TVLRVPFNRGHGGHM*LEGGHRGARLKLSQ Trigger: CTGCGACAGTTTAAGTCTGGCTCCCCTGTGGCCACCTTCAAGCAACATATGGCCCCCGTGACCTCTGTTGAATGGCACCCTCAGGACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTTATTCGGGCCTGCTCATCTCGGAGGAAGATGGCCAGGGCCTGGGGGTCATGATCCAGTTCCCATGTaGAGCCAAGTCTTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VLFGPAHLGGRWPGPGGHDPVPM*SQVLRP Trigger: TGGCCTCAAGACTTGGCTCCACATGGGAACTGGATC...ATGACCCCCAGGCCCTGGCCATCTTCCTCCGAGATGAGCAGGCCCGAATAAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTTGTGGAGCCAAGTCTTaGGGCCAAGTGTTGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: GVTQTQTWPSYGKTLKVPCGAKS*GQVLAT Trigger: GGTGGCCAACACTTGGCCTCAAGACTTGGCTCCACA...AGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGACGGCCTGGTGCCATaGAGATTGTGCATCCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GVTQTQTWPSYGKTLKVPDGLVP*RLCIRS Trigger: GCTTCGGATGCACAATCTCCATGGCACCAGGCCGTC...AGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CCA 90 bp | AATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTCTGAGGGTGACGGCCTaGTGCCATGGAGATTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: NSTGVTQTQTWPSYGKTLLRVTA*CHGDCA Trigger: TGCACAATCTCCATGGCACCAGGCCGTCACCCTCAG...AAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCGGGTCATCCACCACCTaGAGGAGCCGCCGCAGTGCG | + |
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Preference number: 2 (lower is better) Translates to: LGSQPNLTGQKAERELNSGSSTT*RSRRSA Trigger: CGCACTGCGGCGGCTCCTGCAGGTGGTGGATGACCC...GGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAGGAGAAGATGGGTTTTATTCGGGCCTGCTCATCTCGGAGGAAGATGGCCGTAGTGAGGAACCATaGCCAGTTCCAGCTGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SKGEDGFYSGLLISEEDGRSEEP*PVPAEV Trigger: AACCTCAGCTGGAACTGGCCATGGTTCCTCACTACG...GCCATCTTCCTCCGAGATGAGCAGGCCCGAATAAAACCCATCTTCTCCTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACGCGAACACCTCCACTTaGCCCTTCTCTGACCATACT | + |
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Preference number: 2 (lower is better) Translates to: IKFHWSDTDPDLAQLWQNANTST*PFSDHT Trigger: AGTATGGTCAGAGAAGGGCCAAGTGGAGGTGTTCGC...GTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCACTGTGGAGCCAAGTCTTaGGGCCAAGTGTTGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: WISTKSNWPEGRERIKFHCGAKS*GQVLAT Trigger: GGTGGCCAACACTTGGCCTCAAGACTTGGCTCCACA...GTGGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACAAAAATCTCATCCTaGGGCCGTATCTGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: ELNSTGVTQTQTWPSYGKTKISS*GRIWDR Trigger: CCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGT...TTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATTAGGTCCCTGGTCAGAGGTCACAAAAATCTCATCCTaGGGCCGTATCTGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: LKVPEVDQQPELGPWSEVTKISS*GRIWDR Trigger: CCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGT...GACCTCTGACCAGGGACCTAATTCTGGCTGTTGATCAACTTCAGGAACTTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR-3UTR GCA 90 bp | ATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACACAGGCAAGGATCTTTaGCTGCACCTAGTCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: IKFHWSDTDPDLAQLWQNTGKDL*LHLVFG Trigger: ACCAAAGACTAGGTGCAGGCAAAGATCCTTGCCTGT...GTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR-3UTR GCA 90 bp | GAATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACAGGCAAGGATCTTTaGCTGCACCTAGTCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: ELNSTGVTQTQTWPSYGKTGKDL*LHLVFG Trigger: ACCAAAGACTAGGTGCAGGCAAAGATCCTTGCCTGT...TTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR-3UTR CCA 90 bp | CCTACTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAACCAGAATTAGGTCCCTaGTCAGAGGTCCTTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: PTWISTKSNWPEGRERIKPELGP*SEVLGV Trigger: GACCCCAAGGACCTCTGACCAGGGACCTAATTCTGG...TTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATGCCAGGAGTCAACACTaGCAAAAATCTCATCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GPAMAKPLKFLKLINSQNARSQH*QKSHPE Trigger: CTCAGGATGAGATTTTTGTCAGTGTTGACTCCTGGC...ATTCTGGCTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTACTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAAGATCCAGTTCCCATGTaGAGCCAAGTCTTGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PTWISTKSNWPEGRERIKDPVPM*SQVLRP Trigger: TGGCCTCAAGACTTGGCTCCACATGGGAACTGGATC...TTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
||
| 3UTR CCA 72 bp | CGGGCCTGCTCATCTCGGAGGAAGATGGCCAGGGCCTaGGGGTCATCCACCACCTGCAGGAGCCGCCGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RACSSRRKMARA*GSSTTCRSRRS Trigger: ACTGCGGCGGCTCCTGCAGGTGGTGGATGACCCCCAGGCCCTGGCCATCTTCCTCCGAGATGAGCAGGCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR TCA 72 bp | CCACCCTCCGTGGGTGTCCAGAGGTGGACGTTCTTCTaGCAGTCACCAGTCAGCAAGCGGCCGGGCACCCGA | + |
|
Preference number: 3 (lower is better) Translates to: PPSVGVQRWTFF*QSPVSKRPGTR Trigger: TCGGGTGCCCGGCCGCTTGCTGACTGGTGACTGTCAGAAGAACGTCCACCTCTGGACACCCACGGAGGGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR GCA 72 bp | CTCACCTTGGTGCACGAACAGCAACTGCTGGGGGAGTaGCGCCAGCCCAGGGTCTGTCTCTGTCTCCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LTLVHEQQLLGE*RQPRVCLCLPR Trigger: TCGGGGGAGACAGAGACAGACCCTGGGCTGGCGGCACTCCCCCAGCAGTTGCTGTTCGTGCACCAAGGTGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR TCA 72 bp | CCGCCGCAGTGCGAACACCTCCACTTGGCCCTTCTCTaGCCATACTCCAGCCACAGGTTCCTCCCCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PPQCEHLHLALL*PYSSHRFLPQP Trigger: TGGCTGGGGGAGGAACCTGTGGCTGGAGTATGGTCAGAGAAGGGCCAAGTGGAGGTGTTCGCACTGCGGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR GCA 72 bp | AGGGCGGTGCTGATCAGGACCCCCGGGCACTGTGGGTaGCAGTGTAGCTCCTTCAGGTCAGTCTCACCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RAVLIRTPGHCG*QCSSFRSVSPW Trigger: CCAAGGTGAGACTGACCTGAAGGAGCTACACTGGCACCCACAGTGCCCGGGGGTCCTGATCAGCACCGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
||
| 3UTR TCA 72 bp | ACCTCAAACACTGATGGTGCGGAAGACGGTGAAGCCTaGCAGGGCGGTGCTGATCAGGACCCCCGGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: TSNTDGAEDGEA*QGGADQDPRAL Trigger: CAGTGCCCGGGGGTCCTGATCAGCACCGCCCTGTCAGGCTTCACCGTCTTCCGCACCATCAGTGTTTGAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
||
| 3UTR CCA 72 bp | ACCTGCAGGAGCCGCCGCAGTGCGAACACCTCCACTTaGCCCTTCTCTGACCATACTCCAGCCACAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TCRSRRSANTST*PFSDHTPATGS Trigger: GGAACCTGTGGCTGGAGTATGGTCAGAGAAGGGCCAAGTGGAGGTGTTCGCACTGCGGCGGCTCCTGCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
||
| 3UTR CCA 72 bp | TCCTCCACAGACCGTGTGTGGCCCACAAACGGCCTCTaGTCCACATTCCAGGAACCACCCTCCGTGGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSTDRVWPTNGL*STFQEPPSVGV Trigger: GACACCCACGGAGGGTGGTTCCTGGAATGTGGACCAGAGGCCGTTTGTGGGCCACACACGGTCTGTGGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
||
| 3UTR GCA 72 bp | TTCAGGTCAGTCTCACCTTGGTGCACGAACAGCAACTaGTGGGGGAGTGCCGCCAGCCCAGGGTCTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FRSVSPWCTNSN*WGSAASPGSVS Trigger: AGAGACAGACCCTGGGCTGGCGGCACTCCCCCAGCAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
||
| 3UTR GCA 72 bp | TGCCAGTGTAGCTCCTTCAGGTCAGTCTCACCTTGGTaGACGAACAGCAACTGCTGGGGGAGTGCCGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CQCSSFRSVSPW*TNSNCWGSAAS Trigger: GCTGGCGGCACTCCCCCAGCAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCTGAAGGAGCTACACTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTCACCAGTCAGCAAGCGGCCGGGCACCCGAGGGGACCAGTCAAGAGCAAAATGTGGAGCCAAGTCTaGAGGCCAAGTGTTGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TVTSQQAAGHPRGPVKSKMWSQV*RPSVGH Trigger: GTGGCCAACACTTGGCCTCAAGACTTGGCTCCACAT...TTTGCTCTTGACTGGTCCCCTCGGGTGCCCGGCCGCTTGCTGACTGGTGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTCCCAGACTTTGAGGGCACCATCATCCCCACCGCTGAGCAGGAAGGGCTCCACACCGTGTCCTCAGTaGGTGACCACTGCAGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: RSQTLRAPSSPPLSRKGSTPCPQ*VTTADP Trigger: AGGATCTGCAGTGGTCACCAACTGAGGACACGGTGT...GGAGCCCTTCCTGCTCAGCGGTGGGGATGATGGTGCCCTCAAAGTCTGGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
||
| 3UTR CCA 72 bp | GGGTCCCGTTCAACTGCCAGGTCCCATTGTGTGATCTaGTTGTCAGCACCTGAGGCTGCGAAGACCCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GSRSTARSHCVI*LSAPEAAKTPL Trigger: CAGTGGGGTCTTCGCAGCCTCAGGTGCTGACAACCAGATCACACAATGGGACCTGGCAGTTGAACGGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR TCA 72 bp | CAGGTTCCTCCCCCAGCCAAGATACCCGAACTCGGTTaGTGCCACCGTAGTGAGGAACCATGGCCAGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QVPPPAKIPELG*CHRSEEPWPVP Trigger: TGGAACTGGCCATGGTTCCTCACTACGGTGGCATCAACCGAGTTCGGGTATCTTGGCTGGGGGAGGAACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR TCA 72 bp | ACTCTGGGTCCCGTTCAACTGCCAGGTCCCATTGTGTaGTCTGGTTGTCAGCACCTGAGGCTGCGAAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: TLGPVQLPGPIV*SGCQHLRLRRP Trigger: GGGTCTTCGCAGCCTCAGGTGCTGACAACCAGATCACACAATGGGACCTGGCAGTTGAACGGGACCCAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
||
| 3UTR GCA 72 bp | CAGGAGGCAAACACCGTGTCCTCAGTTGGTGACCACTaGAGATCCTCCACAGACCGTGTGTGGCCCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QEANTVSSVGDH*RSSTDRVWPTN Trigger: GTTTGTGGGCCACACACGGTCTGTGGAGGATCTGCAGTGGTCACCAACTGAGGACACGGTGTTTGCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR CCA 72 bp | GTTGGTGACCACTGCAGATCCTCCACAGACCGTGTGTaGCCCACAAACGGCCTCTGGTCCACATTCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGDHCRSSTDRV*PTNGLWSTFQE Trigger: TTCCTGGAATGTGGACCAGAGGCCGTTTGTGGGCCACACACGGTCTGTGGAGGATCTGCAGTGGTCACCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| 3UTR GCA 72 bp | GGGTGCCATTCAACAGAGGTCACGGGGGCCATATGTTaGTTGAAGGTGGCCACAGGGGAGCCAGACTTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GCHSTEVTGAIC*LKVATGEPDLN Trigger: GTTTAAGTCTGGCTCCCCTGTGGCCACCTTCAAGCAACATATGGCCCCCGTGACCTCTGTTGAATGGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGAAGGTGGCCACAGGGGAGCCAGACTTAAACTGTCGCAGGTCCCAGACTTTACACCGTGTCCTCAGTaGGTGACCACTGCAGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LEGGHRGARLKLSQVPDFTPCPQ*VTTADP Trigger: AGGATCTGCAGTGGTCACCAACTGAGGACACGGTGT...AAAGTCTGGGACCTGCGACAGTTTAAGTCTGGCTCCCCTGTGGCCACCTTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
||
| 3UTR CCA 72 bp | AGTTCCCATGTGGAGCCAAGTCTTGAGGCCAAGTGTTaGCCACCTCAAACACTGATGGTGCGGAAGACGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSHVEPSLEAKC*PPQTLMVRKTV Trigger: CACCGTCTTCCGCACCATCAGTGTTTGAGGTGGCCAACACTTGGCCTCAAGACTTGGCTCCACATGGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTCCCATGTGGAGCCAAGTCTTGAGGCCAAGTGTTGGCCACCTCAAACACTGCAGGTCAGTCTCACCTaGGTGCACGAACAGCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: SSHVEPSLEAKCWPPQTLQVSLT*VHEQQL Trigger: CAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCTG...CAGTGTTTGAGGTGGCCAACACTTGGCCTCAAGACTTGGCTCCACATGGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTATGTGGAGCCAAGTCTaGAGGCCAAGTGTTGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LPAPSLWCKAGPRVNPNPMWSQV*RPSVGH Trigger: GTGGCCAACACTTGGCCTCAAGACTTGGCTCCACAT...AGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR-3UTR CAA 90 bp | ATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTGGTCAGAGGTCCTaGGGGTCAAGCCAGGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: IKFHWSDTDPDLAQLWQNPGQRS*GSSQES Trigger: TGACTCCTGGCTTGACCCCAAGGACCTCTGACCAGG...GTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR CCA 72 bp | GTTCCTGAAGTTGATCAACAGCCAGAATTAGGTCCCTaGTCAGAGGTCCTTGGGGTCAAGCCAGGAGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VPEVDQQPELGP*SEVLGVKPGVN Trigger: GTTGACTCCTGGCTTGACCCCAAGGACCTCTGACCAGGGACCTAATTCTGGCTGTTGATCAACTTCAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR CCA 72 bp | AGTACAGTAGTGGTCAGCACAGGAGGGCACCCCAGATaGCTCCCTACTTGGATCTCAACCAAATCTAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: STVVVSTGGHPR*LPTWISTKSNW Trigger: CCAGTTAGATTTGGTTGAGATCCAAGTAGGGAGCCATCTGGGGTGCCCTCCTGTGCTGACCACTACTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| 3UTR CCA 72 bp | ATGATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTaGAGCCAAGTCTTGAGGCCAAGTGTTGGCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: MILAKLTDPVPM*SQVLRPSVGHL Trigger: GAGGTGGCCAACACTTGGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATTACACGGGGGCCATATGTaGCTTGAAGGTGGCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSYGKTLKVPEVDQQPELHGGHM*LEGGHR Trigger: CCTGTGGCCACCTTCAAGCAACATATGGCCCCCGTG...TAATTCTGGCTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
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| 3UTR TCA 72 bp | TCAAGCCAGGAGTCAACACTGACAAAAATCTCATCCTaGGGCCGTATCTGGGACAGGCAAGGATCTTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSQESTLTKISS*GRIWDRQGSLP Trigger: AGGCAAAGATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGACTCCTGGCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| CDS-3UTR GCA 90 bp | TTGAGGGCACCATCATCCCCACCGCTGAGCAGGAAGGGCTCCCTGCGGCTCCAGCTCCGGTTTCACACGTaGGACTCCGGCCCTTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRAPSSPPLSRKGSLRLQLRFHT*DSGPCA Trigger: CGCGCAAGGGCCGGAGTCGCACGTGTGAAACCGGAG...CTGGAGCCGCAGGGAGCCCTTCCTGCTCAGCGGTGGGGATGATGGTGCCCTCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| CDS-3UTR TCA 90 bp | AGAGGTGGACGTTCTTCTGACAGTCACCAGTCAGCAAGCGGCCGGGCACCCGAGGGCACAGGTAAAGACTaGGAGGGAGCTCTGTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGGRSSDSHQSASGRAPEGTGKD*EGALSG Trigger: ACCGGACAGAGCTCCCTCTCAGTCTTTACCTGTGCC...CTCGGGTGCCCGGCCGCTTGCTGACTGGTGACTGTCAGAAGAACGTCCACCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211265.2 |
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| 3UTR CAA 72 bp | GGGGAGCCAGACTTAAACTGTCGCAGGTCCCAGACTTaGAGGGCACCATCATCCCCACCGCTGAGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GEPDLNCRRSQT*RAPSSPPLSRK Trigger: CTTCCTGCTCAGCGGTGGGGATGATGGTGCCCTCAAAGTCTGGGACCTGCGACAGTTTAAGTCTGGCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| CDS-3UTR TCA 90 bp | TGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTTCTGACAGGGCGGTGCTaGTCAGGACCCCCGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CLHLVFGVRQGQGSIQILLTGRC*SGPPGT Trigger: AGTGCCCGGGGGTCCTGATCAGCACCGCCCTGTCAG...AAGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR TCA 90 bp | GATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCTGGTGCGGAAGACGGTaGAGCCTGACAGGGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPCQVNRSSSHVEPSLEAWCGRR*SLTGRC Trigger: GCACCGCCCTGTCAGGCTTCACCGTCTTCCGCACCA...GGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR GCA 90 bp | AATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTTCAGTGGCGGCCCTCTaGCGGGCAGGTAGACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSTGVTQTQTWPSYGKTLSVAAL*RAGRPG Trigger: CCCAGGTCTACCTGCCCGGCAGAGGGCCGCCACTGA...AAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| CDS-3UTR GCA 90 bp | AATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTGGGTCATCCACCACCTaGAGGAGCCGCCGCAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NSTGVTQTQTWPSYGKTLGSSTT*RSRRSA Trigger: CGCACTGCGGCGGCTCCTGCAGGTGGTGGATGACCC...AAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CCA 90 bp | AGAGGTGGACGTTCTTCTGACAGTCACCAGTCAGCAAGCGGCCGGGCACCCGAGAGGTTTCAGCCTCCATaGGTTCTCCGGTTTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: RGGRSSDSHQSASGRAPERFQPP*VLRFHT Trigger: CGTGTGAAACCGGAGAACCCATGGAGGCTGAAACCT...CTCGGGTGCCCGGCCGCTTGCTGACTGGTGACTGTCAGAAGAACGTCCACCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| CDS-3UTR TCA 90 bp | ACAGTCACCAGTCAGCAAGCGGCCGGGCACCCGAGGGGACCAGTCAAGAGCAAAGAACTATGTCAAAGCTaGGACAAGGGGCGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVTSQQAAGHPRGPVKSKELCQS*DKGRQF Trigger: AAACTGGCGCCCCTTGTCTCAGCTTTGACATAGTTC...TTTGCTCTTGACTGGTCCCCTCGGGTGCCCGGCCGCTTGCTGACTGGTGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211265.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGGGCAGTGGCTGTGGTaGGCATGCAGGCCTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVTQTQTWPSYGKTLKVPGQWLW*ACRPCL Trigger: CAGGCAAGGCCTGCATGCTCACCACAGCCACTGCCC...AGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | ATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCACATCATCCCCACCGCTaGGCAGGAAGGGCTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILAKLTDPVPMWSQVLRPHHPHR*AGRAPC Trigger: GCAGGGAGCCCTTCCTGCTCAGCGGTGGGGATGATG...TGGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | GATCTTTGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAACTCCGGTTTCACACGTaGGACTCCGGCCCTTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: DLCLHLVFGVRQGQGSIQLRFHT*DSGPCA Trigger: CGCGCAAGGGCCGGAGTCGCACGTGTGAAACCGGAG...TTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCAAAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
||
| CDS-3UTR GCA 90 bp | GATCTTTGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAACAACTGCTGGGGGAGTaGCGCCAGCCCAGGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLCLHLVFGVRQGQGSIQQLLGE*RQPRVC Trigger: ACAGACCCTGGGCTGGCGGCACTCCCCCAGCAGTTG...TTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCAAAGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | GCAGATCCTCCACAGACCGTGTGTGGCCCACAAACGGCCTCTGGTCCACATTCCAGGTTTCAGCCTCCATaGGTTCTCCGGTTTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: ADPPQTVCGPQTASGPHSRFQPP*VLRFHT Trigger: CGTGTGAAACCGGAGAACCCATGGAGGCTGAAACCT...GGAATGTGGACCAGAGGCCGTTTGTGGGCCACACACGGTCTGTGGAGGATCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209484.2 ENSMUST00000211265.2 |
||
| 3UTR CAA 72 bp | TCCCGTTCAACTGCCAGGTCCCATTGTGTGATCTGGTaGTCAGCACCTGAGGCTGCGAAGACCCCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRSTARSHCVIW*SAPEAAKTPLS Trigger: GGACAGTGGGGTCTTCGCAGCCTCAGGTGCTGACAACCAGATCACACAATGGGACCTGGCAGTTGAACGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209484.2 |
||
| CDS-3UTR GCA 90 bp | GTCAACACTGACAAAAATCTCATCCTGAGGCCGTATCTGGGACAGGCAAGGATCCTCCGGTTTCACACGTaGGACTCCGGCCCTTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: VNTDKNLILRPYLGQARILRFHT*DSGPCA Trigger: CGCGCAAGGGCCGGAGTCGCACGTGTGAAACCGGAG...GATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
||
| CDS-3UTR GCA 90 bp | CCTAATGATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGGGTCATCCACCACCTaGAGGAGCCGCCGCAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PNDPCQVNRSSSHVEPSLGSSTT*RSRRSA Trigger: CGCACTGCGGCGGCTCCTGCAGGTGGTGGATGACCC...AAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATCATTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | GTCAACACTGACAAAAATCTCATCCTGAGGCCGTATCTGGGACAGGCAAGGATCCAACTGCTGGGGGAGTaGCGCCAGCCCAGGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNTDKNLILRPYLGQARIQLLGE*RQPRVC Trigger: ACAGACCCTGGGCTGGCGGCACTCCCCCAGCAGTTG...GATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | TGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTTCCCGGGCACTGTGGGTaGCAGTGTAGCTCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLHLVFGVRQGQGSIQILPGHCG*QCSSFR Trigger: CCTGAAGGAGCTACACTGGCACCCACAGTGCCCGGG...AAGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | AATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTCATGCAGGCCTTGCCTaGGGCTGCTCGGATGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSTGVTQTQTWPSYGKTLHAGLA*GCSDVP Trigger: TGGGACATCCGAGCAGCCCCAGGCAAGGCCTGCATG...AAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTACGAACAGCAACTGCTaGGGGAGTGCCGCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPAPSLWCKAGPRVNPNPTNSNC*GSAASP Trigger: TGGGCTGGCGGCACTCCCCCAGCAGTTGCTGTTCGT...AGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | GATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCCACTTGGCCCTTCTCTaGCCATACTCCAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPCQVNRSSSHVEPSLEAHLALL*PYSSHR Trigger: CCTGTGGCTGGAGTATGGTCAGAGAAGGGCCAAGTG...GGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | GAATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAACATCATCCCCACCGCTaGGCAGGAAGGGCTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELNSTGVTQTQTWPSYGKHHPHR*AGRAPC Trigger: GCAGGGAGCCCTTCCTGCTCAGCGGTGGGGATGATG...TTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | CCTAATGATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTTGGTGCGGAAGACGGTaGAGCCTGACAGGGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNDPCQVNRSSSHVEPSLWCGRR*SLTGRC Trigger: GCACCGCCCTGTCAGGCTTCACCGTCTTCCGCACCA...AAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATCATTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | TCAATCCAAATCCTTAGAGATACCAGGTCAGTAGAGTCCGTTCCTTCTGTTCCACTCTCCCTCGCTCAGTaGCGGCCCTCTGCCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIQILRDTRSVESVPSVPLSLAQ*RPSAGQ Trigger: CTGCCCGGCAGAGGGCCGCCACTGAGCGAGGGAGAG...TGGAACAGAAGGAACGGACTCTACTGACCTGGTATCTCTAAGGATTTGGATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGGGTCAATCCAAATCCTTAGAGATACCAGGTCAGTAGAGTCCGTTCCTGCAGGTCCCAGACTTTaGGGGCACCATCATCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQGSIQILRDTRSVESVPAGPRL*GHHHPH Trigger: GTGGGGATGATGGTGCCCTCAAAGTCTGGGACCTGC...AGGAACGGACTCTACTGACCTGGTATCTCTAAGGATTTGGATTGACCCTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGGGTCAATCCAAATCCTTAGAGATACCAGGTCAGTAGAGTCCGTTCCTGGGCCATATGTTGCTTaGAGGTGGCCACAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGSIQILRDTRSVESVPGPYVA*RWPQGS Trigger: GCTCCCCTGTGGCCACCTTCAAGCAACATATGGCCC...AGGAACGGACTCTACTGACCTGGTATCTCTAAGGATTTGGATTGACCCTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | GTCAACACTGACAAAAATCTCATCCTGAGGCCGTATCTGGGACAGGCAAGGATCGAAGACGGTGAAGCCTaGCAGGGCGGTGCTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VNTDKNLILRPYLGQARIEDGEA*QGGADQ Trigger: CTGATCAGCACCGCCCTGTCAGGCTTCACCGTCTTC...GATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTTCTGAGGGTGACGGCCTaGTGCCATGGAGATTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLHLVFGVRQGQGSIQILLRVTA*CHGDCA Trigger: TGCACAATCTCCATGGCACCAGGCCGTCACCCTCAG...AAGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CCA 90 bp | GTCAACACTGACAAAAATCTCATCCTGAGGCCGTATCTGGGACAGGCAAGGATCCATCTCGGAGGAAGATaGCCAGGGCCTGGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VNTDKNLILRPYLGQARIHLGGR*PGPGGH Trigger: ATGACCCCCAGGCCCTGGCCATCTTCCTCCGAGATG...GATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | GGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTCACACAGGTAAAGACTaGGAGGGAGCTCTGTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTQTQTWPSYGKTLKVPHTGKD*EGALSG Trigger: ACCGGACAGAGCTCCCTCTCAGTCTTTACCTGTGTG...AGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | ATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCACACACAGGTAAAGACTaGGAGGGAGCTCTGTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILAKLTDPVPMWSQVLRPHTGKD*EGALSG Trigger: ACCGGACAGAGCTCCCTCTCAGTCTTTACCTGTGTG...TGGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | CCTAATGATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGCAGGTCCCAGACTTTaGGGGCACCATCATCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PNDPCQVNRSSSHVEPSLAGPRL*GHHHPH Trigger: GTGGGGATGATGGTGCCCTCAAAGTCTGGGACCTGC...AAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATCATTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | TGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTTAAGACCCCACTGTCCTaGGGGTGCCATTCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLHLVFGVRQGQGSIQILKTPLS*GCHSTE Trigger: CTCTGTTGAATGGCACCCTCAGGACAGTGGGGTCTT...AAGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | TGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCACCTGACAGGGCGGTGCTaGTCAGGACCCCCGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: WISTKSNWPEGRERIKFHLTGRC*SGPPGT Trigger: AGTGCCCGGGGGTCCTGATCAGCACCGCCCTGTCAG...GTGGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | CCTAATGATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAAGACGGTGAAGCCTaGCAGGGCGGTGCTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PNDPCQVNRSSSHVEPSLEDGEA*QGGADQ Trigger: CTGATCAGCACCGCCCTGTCAGGCTTCACCGTCTTC...AAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATCATTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATACGAACAGCAACTGCTaGGGGAGTGCCGCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPAMAKPLKFLKLINSQNTNSNC*GSAASP Trigger: TGGGCTGGCGGCACTCCCCCAGCAGTTGCTGTTCGT...ATTCTGGCTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR TCA 90 bp | TTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCAAGTGTTGGCCACCGGTTGTCGCCCAAGTaGTCTCGAACTATGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTDPVPMWSQVLRPSVGHRLSPK*SRTMSK Trigger: CTTTGACATAGTTCGAGATCACTTGGGCGACAACCG...GTGGCCAACACTTGGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR TCA 90 bp | GGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTATACCCGAACTCGGTTaGTGCCACCGTAGTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVTQTQTWPSYGKTLKVPIPELG*CHRSEE Trigger: TTCCTCACTACGGTGGCATCAACCGAGTTCGGGTAT...AGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR TCA 90 bp | CCTACTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAAGGGCAGTGGCTGTGGTaGGCATGCAGGCCTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTWISTKSNWPEGRERIKGQWLW*ACRPCL Trigger: CAGGCAAGGCCTGCATGCTCACCACAGCCACTGCCC...TTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAGTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR GCA 90 bp | CTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCCTCCGGTTTCACACGTaGGACTCCGGCCCTTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGSQPNLTGQKAERELNSLRFHT*DSGPCA Trigger: CGCGCAAGGGCCGGAGTCGCACGTGTGAAACCGGAG...GGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
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| CDS-3UTR GCA 90 bp | GTCAACACTGACAAAAATCTCATCCTGAGGCCGTATCTGGGACAGGCAAGGATCGCATCATCAGTCTATTaGTCTGGGCGCTCTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VNTDKNLILRPYLGQARIASSVY*SGRSPP Trigger: AGGCGGAGAGCGCCCAGAGCAATAGACTGATGATGC...GATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR GCA 90 bp | GAATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAAGGGTGACGGCCTGGTaGCATGGAGATTGTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ELNSTGVTQTQTWPSYGKRVTAW*HGDCAS Trigger: GGATGCACAATCTCCATGGCACCAGGCCGTCACCCT...TTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | GGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTTCAGTTGGTGACCACTaGAGATCCTCCACAGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTQTQTWPSYGKTLKVPSVGDH*RSSTDR Trigger: ACGGTCTGTGGAGGATCTGCAGTGGTCACCAACTGA...AGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | GGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTAGGTTTCAGCCTCCATaGGTTCTCCGGTTTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: GVTQTQTWPSYGKTLKVPRFQPP*VLRFHT Trigger: CGTGTGAAACCGGAGAACCCATGGAGGCTGAAACCT...AGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
||
| CDS-3UTR CCA 90 bp | GATCTTTGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAGCGAACACCTCCACTTaGCCCTTCTCTGACCATACT | + |
|
Preference number: 4 (lower is better) Translates to: DLCLHLVFGVRQGQGSIQANTST*PFSDHT Trigger: AGTATGGTCAGAGAAGGGCCAAGTGGAGGTGTTCGC...TTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCAAAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTTAGGTCAGTCTCACCTTaGTGCACGAACAGCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLHLVFGVRQGQGSIQILRSVSP*CTNSNC Trigger: GCAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCT...AAGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | ATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCAGAACTATGTCAAAGCTaGGACAAGGGGCGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILAKLTDPVPMWSQVLRPELCQS*DKGRQF Trigger: AAACTGGCGCCCCTTGTCTCAGCTTTGACATAGTTC...TGGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | TTGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTCGGTTGTCGCCCAAGTaGTCTCGAACTATGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPAPSLWCKAGPRVNPNPRLSPK*SRTMSK Trigger: CTTTGACATAGTTCGAGATCACTTGGGCGACAACCG...AGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | GTCAACACTGACAAAAATCTCATCCTGAGGCCGTATCTGGGACAGGCAAGGATCATACCCGAACTCGGTTaGTGCCACCGTAGTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VNTDKNLILRPYLGQARIIPELG*CHRSEE Trigger: TTCCTCACTACGGTGGCATCAACCGAGTTCGGGTAT...GATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | CCTAATGATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTAAGACCCCACTGTCCTaGGGGTGCCATTCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNDPCQVNRSSSHVEPSLKTPLS*GCHSTE Trigger: CTCTGTTGAATGGCACCCTCAGGACAGTGGGGTCTT...AAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATCATTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATAGGGTGACGGCCTGGTaGCATGGAGATTGTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GPAMAKPLKFLKLINSQNRVTAW*HGDCAS Trigger: GGATGCACAATCTCCATGGCACCAGGCCGTCACCCT...ATTCTGGCTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | CTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATTAGGTCCCTGGTCAGAGGTCACGGGGGCCATATGTTaGTTGAAGGTGGCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKVPEVDQQPELGPWSEVTGAIC*LKVATG Trigger: CCCTGTGGCCACCTTCAAGCAACATATGGCCCCCGT...GACCTCTGACCAGGGACCTAATTCTGGCTGTTGATCAACTTCAGGAACTTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCCCCGGGCACTGTGGGTaGCAGTGTAGCTCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSQPNLTGQKAERELNSPGHCG*QCSSFR Trigger: CCTGAAGGAGCTACACTGGCACCCACAGTGCCCGGG...GGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGGGTCAATCCAAATCCTTAGAGATACCAGGTCAGTAGAGTCCGTTCCTAGGTTTCAGCCTCCATaGGTTCTCCGGTTTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: GQGSIQILRDTRSVESVPRFQPP*VLRFHT Trigger: CGTGTGAAACCGGAGAACCCATGGAGGCTGAAACCT...AGGAACGGACTCTACTGACCTGGTATCTCTAAGGATTTGGATTGACCCTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 |
||
| CDS-3UTR CCA 90 bp | CAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGGACGGCCTGGTGCCATaGAGATTGTGCATCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTWPSYGKTLKVPEVDQQDGLVP*RLCIRS Trigger: GCTTCGGATGCACAATCTCCATGGCACCAGGCCGTC...CTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | CTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATTAGGTCCCTGGTCAGAGGTCGACGGCCTGGTGCCATaGAGATTGTGCATCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKVPEVDQQPELGPWSEVDGLVP*RLCIRS Trigger: GCTTCGGATGCACAATCTCCATGGCACCAGGCCGTC...GACCTCTGACCAGGGACCTAATTCTGGCTGTTGATCAACTTCAGGAACTTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATTAAAGATGGCCAGGGCCTaGGGGTCATCCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSYGKTLKVPEVDQQPELKMARA*GSSTTC Trigger: GCAGGTGGTGGATGACCCCCAGGCCCTGGCCATCTT...TAATTCTGGCTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CCA 90 bp | CTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCAAGATGGCCAGGGCCTaGGGGTCATCCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSQPNLTGQKAERELNSKMARA*GSSTTC Trigger: GCAGGTGGTGGATGACCCCCAGGCCCTGGCCATCTT...GGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CCA 90 bp | TGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCACCATGCAGGCCTTGCCTaGGGCTGCTCGGATGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WISTKSNWPEGRERIKFHHAGLA*GCSDVP Trigger: TGGGACATCCGAGCAGCCCCAGGCAAGGCCTGCATG...GTGGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | ATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCATTAACATCTCCATCATaGGCAGTGGCTGTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILAKLTDPVPMWSQVLRPLTSPS*AVAVVS Trigger: GCTCACCACAGCCACTGCCCATGATGGAGATGTTAA...TGGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR TCA 90 bp | TCAATCCAAATCCTTAGAGATACCAGGTCAGTAGAGTCCGTTCCTTCTGTTCCACACTTGGCCCTTCTCTaGCCATACTCCAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIQILRDTRSVESVPSVPHLALL*PYSSHR Trigger: CCTGTGGCTGGAGTATGGTCAGAGAAGGGCCAAGTG...TGGAACAGAAGGAACGGACTCTACTGACCTGGTATCTCTAAGGATTTGGATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR TCA 90 bp | TGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCACGGGCCATATGTTGCTTaGAGGTGGCCACAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WISTKSNWPEGRERIKFHGPYVA*RWPQGS Trigger: GCTCCCCTGTGGCCACCTTCAAGCAACATATGGCCC...GTGGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | CCTACTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAACATCTCGGAGGAAGATaGCCAGGGCCTGGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTWISTKSNWPEGRERIKHLGGR*PGPGGH Trigger: ATGACCCCCAGGCCCTGGCCATCTTCCTCCGAGATG...TTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | GTCAACACTGACAAAAATCTCATCCTGAGGCCGTATCTGGGACAGGCAAGGATCGTGCCATGGAGATTGTaGATCCGAAGCATCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNTDKNLILRPYLGQARIVPWRL*IRSIIS Trigger: ACTGATGATGCTTCGGATGCACAATCTCCATGGCAC...GATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | CCTACTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAAACGGGGGCCATATGTTaGTTGAAGGTGGCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTWISTKSNWPEGRERIKTGAIC*LKVATG Trigger: CCCTGTGGCCACCTTCAAGCAACATATGGCCCCCGT...TTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | CAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGCGTAGTGAGGAACCATaGCCAGTTCCAGCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTWPSYGKTLKVPEVDQQRSEEP*PVPAEV Trigger: AACCTCAGCTGGAACTGGCCATGGTTCCTCACTACG...CTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CCA 90 bp | CTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATTAGGTCCCTGGTCAGAGGTCCGTAGTGAGGAACCATaGCCAGTTCCAGCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKVPEVDQQPELGPWSEVRSEEP*PVPAEV Trigger: AACCTCAGCTGGAACTGGCCATGGTTCCTCACTACG...GACCTCTGACCAGGGACCTAATTCTGGCTGTTGATCAACTTCAGGAACTTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | CAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGGCGAACACCTCCACTTaGCCCTTCTCTGACCATACT | + |
|
Preference number: 4 (lower is better) Translates to: QTWPSYGKTLKVPEVDQQANTST*PFSDHT Trigger: AGTATGGTCAGAGAAGGGCCAAGTGGAGGTGTTCGC...CTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGGGTCAATCCAAATCCTTAGAGATACCAGGTCAGTAGAGTCCGTTCCTCAGCAAAGGAGAAGATaGGTTTTATTCGGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGSIQILRDTRSVESVPQQRRR*VLFGPA Trigger: AGCAGGCCCGAATAAAACCCATCTTCTCCTTTGCTG...AGGAACGGACTCTACTGACCTGGTATCTCTAAGGATTTGGATTGACCCTTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CCA 90 bp | GGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATAGGTCAGTCTCACCTTaGTGCACGAACAGCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPAMAKPLKFLKLINSQNRSVSP*CTNSNC Trigger: GCAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCT...ATTCTGGCTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR GCA 90 bp | TGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCACGCATCATCAGTCTATTaGTCTGGGCGCTCTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WISTKSNWPEGRERIKFHASSVY*SGRSPP Trigger: AGGCGGAGAGCGCCCAGAGCAATAGACTGATGATGC...GTGGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR GCA 90 bp | CAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGGTGCCATGGAGATTGTaGATCCGAAGCATCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTWPSYGKTLKVPEVDQQVPWRL*IRSIIS Trigger: ACTGATGATGCTTCGGATGCACAATCTCCATGGCAC...CTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCTCAGTTGGTGACCACTaGAGATCCTCCACAGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSQPNLTGQKAERELNSSVGDH*RSSTDR Trigger: ACGGTCTGTGGAGGATCTGCAGTGGTCACCAACTGA...GGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR TCA 90 bp | CTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCGAACTATGTCAAAGCTaGGACAAGGGGCGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSQPNLTGQKAERELNSELCQS*DKGRQF Trigger: AAACTGGCGCCCCTTGTCTCAGCTTTGACATAGTTC...GGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CCA 90 bp | TGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCACTTAACATCTCCATCATaGGCAGTGGCTGTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WISTKSNWPEGRERIKFHLTSPS*AVAVVS Trigger: GCTCACCACAGCCACTGCCCATGATGGAGATGTTAA...GTGGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CCA 90 bp | CCTACTTGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAACAGCAAAGGAGAAGATaGGTTTTATTCGGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTWISTKSNWPEGRERIKQQRRR*VLFGPA Trigger: AGCAGGCCCGAATAAAACCCATCTTCTCCTTTGCTG...TTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCAAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS CCA 90 bp | CCTGGGATGGGCCTTCGGTTCCTGGGTCGCAGGTTTCAGCCTCCATaGGTTCTCCGGTTTCACACGTGCGACTCCGGCCCTTGCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGMGLRFLGRRFQPP*VLRFHTCDSGPCAP Trigger: CGGCGCGCAAGGGCCGGAGTCGCACGTGTGAAACCGGAGAACCCATGGAGGCTGAAACCTGCGACCCAGGAACCGAAGGCCCATCCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| CDS CCA 90 bp | CACGTAGGCCTCTTCATCCATTACCAGCTCCTCTCCCTCGCTCAGTaGCGGCCCTCTGCCGGGCAGGTAGACCTGGGATGGGCCTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HVGLFIHYQLLSLAQ*RPSAGQVDLGWAFG Trigger: ACCGAAGGCCCATCCCAGGTCTACCTGCCCGGCAGAGGGCCGCCACTGAGCGAGGGAGAGGAGCTGGTAATGGATGAAGAGGCCTACGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| CDS TCA 90 bp | TGCTCTGGGCGCTCTCCGCCTGGGTTCCCGCACACAGGTAAAGACTaGGAGGGAGCTCTGTCCGGTTGTCGCCCAAGTGATCTCGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: CSGRSPPGFPHTGKD*EGALSGCRPSDLEL Trigger: TAGTTCGAGATCACTTGGGCGACAACCGGACAGAGCTCCCTCTCAGTCTTTACCTGTGTGCGGGAACCCAGGCGGAGAGCGCCCAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS GCA 90 bp | TCATCACTGCCCTCTGAGGGTGACGGCCTGGTGCCATGGAGATTGTaGATCCGAAGCATCATCAGTCTATTGCTCTGGGCGCTCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLPSEGDGLVPWRL*IRSIISLLLWALSA Trigger: GGCGGAGAGCGCCCAGAGCAATAGACTGATGATGCTTCGGATGCACAATCTCCATGGCACCAGGCCGTCACCCTCAGAGGGCAGTGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | GATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCGTGAGCATGCAGGCCTaGCCTGGGGCTGCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: DPCQVNRSSSHVEPSLEAVSMQA*PGAARM Trigger: CATCCGAGCAGCCCCAGGCAAGGCCTGCATGCTCAC...GGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | ATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCAGTGAGCATGCAGGCCTaGCCTGGGGCTGCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ILAKLTDPVPMWSQVLRPVSMQA*PGAARM Trigger: CATCCGAGCAGCCCCAGGCAAGGCCTGCATGCTCAC...TGGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS TCA 90 bp | GCTCTGTCCGGTTGTCGCCCAAGTGATCTCGAACTATGTCAAAGCTaGGACAAGGGGCGCCAGTTTGCGCACGATGGTACAGCACGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSGCRPSDLELCQS*DKGRQFAHDGTARR Trigger: CCTACGTGCTGTACCATCGTGCGCAAACTGGCGCCCCTTGTCTCAGCTTTGACATAGTTCGAGATCACTTGGGCGACAACCGGACAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000211265.2 |
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| CDS CCA 90 bp | TCCTCATCGTCATCACTGCCCTCTGAGGGTGACGGCCTGGTGCCATaGAGATTGTGCATCCGAAGCATCATCAGTCTATTGCTCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSLPSEGDGLVP*RLCIRSIISLLLWA Trigger: CGCCCAGAGCAATAGACTGATGATGCTTCGGATGCACAATCTCCATGGCACCAGGCCGTCACCCTCAGAGGGCAGTGATGACGATGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | GATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGAGGCCGGGGCCATATGTTGCTaGAAGGTGGCCACAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DPCQVNRSSSHVEPSLEAGAICC*KVATGE Trigger: CTCCCCTGTGGCCACCTTCAAGCAACATATGGCCCC...GGCCTCAAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | TGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTTAGCATCATCAGTCTATaGCTCTGGGCGCTCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CLHLVFGVRQGQGSIQILSIISL*LWALSA Trigger: GGCGGAGAGCGCCCAGAGCAATAGACTGATGATGCT...AAGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS GCA 90 bp | CATCTTCCTCATCGTCATCACTGCCCTCTGAGGGTGACGGCCTGGTaGCATGGAGATTGTGCATCCGAAGCATCATCAGTCTATTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLPHRHHCPLRVTAW*HGDCASEASSVYCS Trigger: AGAGCAATAGACTGATGATGCTTCGGATGCACAATCTCCATGGCACCAGGCCGTCACCCTCAGAGGGCAGTGATGACGATGAGGAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | GGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCCTTAAAGTTCCTACACCGTGTCCTCAGTaGGTGACCACTGCAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GVTQTQTWPSYGKTLKVPTPCPQ*VTTADP Trigger: AGGATCTGCAGTGGTCACCAACTGAGGACACGGTGT...AGGAACTTTAAGGGTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | ATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACCGCAGGTCCCAGACTTaGAGGGCACCATCATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IKFHWSDTDPDLAQLWQNRRSQT*RAPSSP Trigger: TGGGGATGATGGTGCCCTCAAAGTCTGGGACCTGCG...GTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | CCTAATGATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTGGGGCCATATGTTGCTaGAAGGTGGCCACAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PNDPCQVNRSSSHVEPSLGAICC*KVATGE Trigger: CTCCCCTGTGGCCACCTTCAAGCAACATATGGCCCC...AAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATCATTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | CCTAATGATCCTTGCCAAGTTAACCGATCCAGTTCCCATGTGGAGCCAAGTCTTCACGGGGGCCATATGTaGCTTGAAGGTGGCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PNDPCQVNRSSSHVEPSLHGGHM*LEGGHR Trigger: CCTGTGGCCACCTTCAAGCAACATATGGCCCCCGTG...AAGACTTGGCTCCACATGGGAACTGGATCGGTTAACTTGGCAAGGATCATTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | ATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAACAGCATCATCAGTCTATaGCTCTGGGCGCTCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: IKFHWSDTDPDLAQLWQNSIISL*LWALSA Trigger: GGCGGAGAGCGCCCAGAGCAATAGACTGATGATGCT...GTTTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | TTGCCTGCACCTAGTCTTTGGTGTAAGGCAGGGCCAAGGGTCAATCCAAATCCTCTGGTGCCATGGAGATaGTGCATCCGAAGCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: LPAPSLWCKAGPRVNPNPLVPWR*CIRSII Trigger: GATGATGCTTCGGATGCACAATCTCCATGGCACCAG...AGGATTTGGATTGACCCTTGGCCCTGCCTTACACCAAAGACTAGGTGCAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | GGCCAAGGGTCAATCCAAATCCTTAGAGATACCAGGTCAGTAGAGTCCGTTCCTCAGGTCAGTCTCACCTaGGTGCACGAACAGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GQGSIQILRDTRSVESVPQVSLT*VHEQQL Trigger: CAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCTG...AGGAACGGACTCTACTGACCTGGTATCTCTAAGGATTTGGATTGACCCTTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | GTCAACACTGACAAAAATCTCATCCTGAGGCCGTATCTGGGACAGGCAAGGATCCAGGTCAGTCTCACCTaGGTGCACGAACAGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VNTDKNLILRPYLGQARIQVSLT*VHEQQL Trigger: CAGTTGCTGTTCGTGCACCAAGGTGAGACTGACCTG...GATCCTTGCCTGTCCCAGATACGGCCTCAGGATGAGATTTTTGTCAGTGTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CAA 90 bp | GAATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAACATTGTGTGATCTGGTaGTCAGCACCTGAGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ELNSTGVTQTQTWPSYGKHCVIW*SAPEAA Trigger: CGCAGCCTCAGGTGCTGACAACCAGATCACACAATG...TTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CAA 90 bp | TGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCACCGCAGGTCCCAGACTTaGAGGGCACCATCATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WISTKSNWPEGRERIKFHRRSQT*RAPSSP Trigger: TGGGGATGATGGTGCCCTCAAAGTCTGGGACCTGCG...GTGGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CAA 90 bp | TGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCACCACGGGGGCCATATGTaGCTTGAAGGTGGCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: WISTKSNWPEGRERIKFHHGGHM*LEGGHR Trigger: CCTGTGGCCACCTTCAAGCAACATATGGCCCCCGTG...GTGGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
||
| CDS-3UTR CAA 90 bp | GAATTAAATTCCACTGGAGTGACACAGACCCAGACTTGGCCCAGCTATGGCAAAAACTGCCAGGTCCCATaGTGTGATCTGGTTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELNSTGVTQTQTWPSYGKNCQVP*CDLVVS Trigger: GCTGACAACCAGATCACACAATGGGACCTGGCAGTT...TTTGCCATAGCTGGGCCAAGTCTGGGTCTGTGTCACTCCAGTGGAATTTAATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | GGCCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATCTGGTGCCATGGAGATaGTGCATCCGAAGCATCATC | + |
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Preference number: 5 (lower is better) Translates to: GPAMAKPLKFLKLINSQNLVPWR*CIRSII Trigger: GATGATGCTTCGGATGCACAATCTCCATGGCACCAG...ATTCTGGCTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | CCCAGCTATGGCAAAACCCTTAAAGTTCCTGAAGTTGATCAACAGCCAGAATTACATTGTGTGATCTGGTaGTCAGCACCTGAGGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: PSYGKTLKVPEVDQQPELHCVIW*SAPEAA Trigger: CGCAGCCTCAGGTGCTGACAACCAGATCACACAATG...TAATTCTGGCTGTTGATCAACTTCAGGAACTTTAAGGGTTTTGCCATAGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS-3UTR CAA 90 bp | TGGATCTCAACCAAATCTAACTGGCCAGAAGGCAGAGAGAGAATTAAATTCCACAACTGCCAGGTCCCATaGTGTGATCTGGTTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: WISTKSNWPEGRERIKFHNCQVP*CDLVVS Trigger: GCTGACAACCAGATCACACAATGGGACCTGGCAGTT...GTGGAATTTAATTCTCTCTCTGCCTTCTGGCCAGTTAGATTTGGTTGAGATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS CCA 72 bp | CAGTGGCGGCCCTCTGCCGGGCAGGTAGACCTGGGATaGGCCTTCGGTTCCTGGGTCGCAGGTTTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QWRPSAGQVDLG*AFGSWVAGFSL Trigger: GAGGCTGAAACCTGCGACCCAGGAACCGAAGGCCCATCCCAGGTCTACCTGCCCGGCAGAGGGCCGCCACTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| CDS CCA 72 bp | GGCCTTCGGTTCCTGGGTCGCAGGTTTCAGCCTCCATaGGTTCTCCGGTTTCACACGTGCGACTCCGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GLRFLGRRFQPP*VLRFHTCDSGP Trigger: AGGGCCGGAGTCGCACGTGTGAAACCGGAGAACCCATGGAGGCTGAAACCTGCGACCCAGGAACCGAAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000209484.2 ENSMUST00000211265.2 |
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| CDS TCA 72 bp | CGCTCTCCGCCTGGGTTCCCGCACACAGGTAAAGACTaGGAGGGAGCTCTGTCCGGTTGTCGCCCAAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: RSPPGFPHTGKD*EGALSGCRPSD Trigger: ATCACTTGGGCGACAACCGGACAGAGCTCCCTCTCAGTCTTTACCTGTGTGCGGGAACCCAGGCGGAGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS CAA 90 bp | TCGTCATCACTGCCCTCTGAGGGTGACGGCCTGGTGCCATGGAGATaGTGCATCCGAAGCATCATCAGTCTATTGCTCTGGGCGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSLPSEGDGLVPWR*CIRSIISLLLWALS Trigger: GGAGAGCGCCCAGAGCAATAGACTGATGATGCTTCGGATGCACAATCTCCATGGCACCAGGCCGTCACCCTCAGAGGGCAGTGATGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS GCA 72 bp | CCCTCTGAGGGTGACGGCCTGGTGCCATGGAGATTGTaGATCCGAAGCATCATCAGTCTATTGCTCTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PSEGDGLVPWRL*IRSIISLLLWA Trigger: CGCCCAGAGCAATAGACTGATGATGCTTCGGATGCACAATCTCCATGGCACCAGGCCGTCACCCTCAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS GCA 72 bp | CATCGTCATCACTGCCCTCTGAGGGTGACGGCCTGGTaGCATGGAGATTGTGCATCCGAAGCATCATCAGTC | + |
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Preference number: 6 (lower is better) Translates to: HRHHCPLRVTAW*HGDCASEASSV Trigger: GACTGATGATGCTTCGGATGCACAATCTCCATGGCACCAGGCCGTCACCCTCAGAGGGCAGTGATGACGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS CCA 72 bp | CCTCATCGTCATCACTGCCCTCTGAGGGTGACGGCCTaGTGCCATGGAGATTGTGCATCCGAAGCATCATCA | + |
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Preference number: 6 (lower is better) Translates to: PHRHHCPLRVTA*CHGDCASEASS Trigger: TGATGATGCTTCGGATGCACAATCTCCATGGCACCAGGCCGTCACCCTCAGAGGGCAGTGATGACGATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS CAA 72 bp | CTGCCCTCTGAGGGTGACGGCCTGGTGCCATGGAGATaGTGCATCCGAAGCATCATCAGTCTATTGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPSEGDGLVPWR*CIRSIISLLLW Trigger: CCAGAGCAATAGACTGATGATGCTTCGGATGCACAATCTCCATGGCACCAGGCCGTCACCCTCAGAGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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| CDS TCA 72 bp | AGACTGAGAGGGAGCTCTGTCCGGTTGTCGCCCAAGTaGTCTCGAACTATGTCAAAGCTGAGACAAGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RLRGSSVRLSPK*SRTMSKLRQGA Trigger: CGCCCCTTGTCTCAGCTTTGACATAGTTCGAGATCACTTGGGCGACAACCGGACAGAGCTCCCTCTCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000211265.2 |
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| CDS TCA 72 bp | GGTTGTCGCCCAAGTGATCTCGAACTATGTCAAAGCTaGGACAAGGGGCGCCAGTTTGCGCACGATGGTACA | + |
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Preference number: 6 (lower is better) Translates to: GCRPSDLELCQS*DKGRQFAHDGT Trigger: TGTACCATCGTGCGCAAACTGGCGCCCCTTGTCTCAGCTTTGACATAGTTCGAGATCACTTGGGCGACAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 ENSMUST00000211265.2 |
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| CDS CCA 72 bp | TCATCACTGCCCTCTGAGGGTGACGGCCTGGTGCCATaGAGATTGTGCATCCGAAGCATCATCAGTCTATTG | + |
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Preference number: 6 (lower is better) Translates to: SSLPSEGDGLVP*RLCIRSIISLL Trigger: CAATAGACTGATGATGCTTCGGATGCACAATCTCCATGGCACCAGGCCGTCACCCTCAGAGGGCAGTGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107723.9 ENSMUST00000131384.3 |
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