Pregenerated sensors for GRTP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038515Ensembl transcript IDs: ENSMUST00000165605.4, ENSMUST00000209516.2, ENSMUST00000209691.2, ENSMUST00000209895.2, ENSMUST00000210317.2, ENSMUST00000211128.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGAGAACTGCAGCTGTGGGCGCCTGTGCACTCAGCTCTGTGCCTaGAGCGCTGCTCGGCAGCTCTTCCGAAGCCTGGTGATGGTCGTC | + |
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Preference number: 1 (lower is better) Translates to: EENCSCGRLCTQLCA*SAARQLFRSLVMVV Trigger: GACGACCATCACCAGGCTTCGGAAGAGCTGCCGAGCAGCGCTGCAGGCACAGAGCTGAGTGCACAGGCGCCCACAGCTGCAGTTCTCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209516.2 |
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| 3UTR CCA 90 bp | TGGGGAGAGGAAAGCCTGGCCTCCAGGCTTGCTTGTTGGGGTCACTaGCAGGGTTGCAGGCTCTACCTTCCTGGTCTGACTGGAAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: WGEESLASRLACWGH*QGCRLYLPGLTGSR Trigger: CCTGCTTCCAGTCAGACCAGGAAGGTAGAGCCTGCAACCCTGCCAGTGACCCCAACAAGCAAGCCTGGAGGCCAGGCTTTCCTCTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR GCA 90 bp | GAAAGCCTGGCCTCCAGGCTTGCTTGTTGGGGTCACTGGCAGGGTTaGAGGCTCTACCTTCCTGGTCTGACTGGAAGCAGGAGCAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: ESLASRLACWGHWQG*RLYLPGLTGSRSSS Trigger: TGAGCTGCTCCTGCTTCCAGTCAGACCAGGAAGGTAGAGCCTGCAACCCTGCCAGTGACCCCAACAAGCAAGCCTGGAGGCCAGGCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR CCA 90 bp | AGGCAGATGAACCAGCGGGACACCAGCAGGGTCCACAACACACCATaGCCATCCATCAGGGCTGCCACTGCTGGTAGCTTCATCCTCACC | + |
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Preference number: 1 (lower is better) Translates to: RQMNQRDTSRVHNTP*PSIRAATAGSFILT Trigger: GGTGAGGATGAAGCTACCAGCAGTGGCAGCCCTGATGGATGGCCATGGTGTGTTGTGGACCCTGCTGGTGTCCCGCTGGTTCATCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
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| 3UTR TCA 90 bp | CAAACGACCTTGGGGGACATCTGGACAGTAGTGTGGGTGCAGCTCTaGGCCCATCCACTCCTGGGCGGAGCTAGTACATCATGCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: QTTLGDIWTVVWVQL*AHPLLGGASTSCLP Trigger: TGGGAGGCATGATGTACTAGCTCCGCCCAGGAGTGGATGGGCTCAGAGCTGCACCCACACTACTGTCCAGATGTCCCCCAAGGTCGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR TCA 90 bp | CTTGTTGGGGTCACTGGCAGGGTTGCAGGCTCTACCTTCCTGGTCTaGCTGGAAGCAGGAGCAGCTCACATCAGCCCTCTGAAAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LVGVTGRVAGSTFLV*LEAGAAHISPLKGR Trigger: CCTCCCTTTCAGAGGGCTGATGTGAGCTGCTCCTGCTTCCAGTCAGACCAGGAAGGTAGAGCCTGCAACCCTGCCAGTGACCCCAACAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR GCA 90 bp | AGGGCAAGGTCTGCCTGTGGGTCTTGTAACTTAGCTTCCCAGTCCTaGCTTTGGGGAGAGGAAAGCCTGGCCTCCAGGCTTGCTTGTTGG | + |
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Preference number: 1 (lower is better) Translates to: RARSACGSCNLASQS*LWGEESLASRLACW Trigger: CCAACAAGCAAGCCTGGAGGCCAGGCTTTCCTCTCCCCAAAGGCAGGACTGGGAAGCTAAGTTACAAGACCCACAGGCAGACCTTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR TCA 90 bp | CACCCCAGGGACCAATCTAAGCCATCTTGGCAAGGCACAGCATTCTaGACAGTAGGCACTATGTGGGAACTCAGAAACCTGCCAGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: HPRDQSKPSWQGTAF*TVGTMWELRNLPGV Trigger: CACACCTGGCAGGTTTCTGAGTTCCCACATAGTGCCTACTGTTCAGAATGCTGTGCCTTGCCAAGATGGCTTAGATTGGTCCCTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
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| 3UTR TCA 90 bp | GGCAGGAGACAACAGGAGCCTTGCCTTAGAAGCATCACGTGCCTCTaGTCAGCTTCAGAAACCAAAAGCAGTCCAGAGAATCCAGACTGG | + |
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Preference number: 1 (lower is better) Translates to: GRRQQEPCLRSITCL*SASETKSSPENPDW Trigger: CCAGTCTGGATTCTCTGGACTGCTTTTGGTTTCTGAAGCTGATCAGAGGCACGTGATGCTTCTAAGGCAAGGCTCCTGTTGTCTCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR TCA 90 bp | TCAGCCCAAATGACACATCTAGTGGGAGTTGCGGTATCAACTTGGTaGCCCTCCACAGGTAGGATGTCCACAAACAGGCAGATGAACCAG | + |
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Preference number: 1 (lower is better) Translates to: SAQMTHLVGVAVSTW*PSTGRMSTNRQMNQ Trigger: CTGGTTCATCTGCCTGTTTGTGGACATCCTACCTGTGGAGGGTCACCAAGTTGATACCGCAACTCCCACTAGATGTGTCATTTGGGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
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| 3UTR CCA 90 bp | TTCCAAGATTTAGTCCATAATGGTGATGGGAAGCCTGGCAGCATGTaGGCAGACAAGGTGCTGGAGAGTTATGGATTTGCTAGCAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: FQDLVHNGDGKPGSM*ADKVLESYGFASKS Trigger: GCTCTTGCTAGCAAATCCATAACTCTCCAGCACCTTGTCTGCCCACATGCTGCCAGGCTTCCCATCACCATTATGGACTAAATCTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
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| 3UTR TCA 90 bp | ATGTGGGAACTCAGAAACCTGCCAGGTGTGGTTAAGGACTCCTCCTaGCTTGTTAGAGTGGTTATGTCTCCTCCATTAGCCATTAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: MWELRNLPGVVKDSS*LVRVVMSPPLAISA Trigger: AGCACTAATGGCTAATGGAGGAGACATAACCACTCTAACAAGTCAGGAGGAGTCCTTAACCACACCTGGCAGGTTTCTGAGTTCCCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGTGCCTGCAGCGCTGCTCGGCAGCTCTTCCGAAGCCTGGTGATGGTCGTGTGAAGTGTGTGCTCTaGAGAGAACTGCAGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ALCLQRCSAALPKPGDGRVKCVL*RELQLW Trigger: CCACAGCTGCAGTTCTCTTCAGAGCACACACTTCAC...ACGACCATCACCAGGCTTCGGAAGAGCTGCCGAGCAGCGCTGCAGGCACAGAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209516.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAAGCCTGGCCTCCAGGCTTGCTTGTTGGGGTCACTGGCAGGGTTGCAGGACCCAACTAAGATCATaGAGCTGGGCCAGAGAATTC | + |
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Preference number: 2 (lower is better) Translates to: EESLASRLACWGHWQGCRTQLRS*SWAREF Trigger: GAATTCTCTGGCCCAGCTTCATGATCTTAGTTGGGT...CCTGCAACCCTGCCAGTGACCCCAACAAGCAAGCCTGGAGGCCAGGCTTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTGTGCACTCTGCTCTGAAGAGAACTaGAGCTGTGGGCGCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: IGEVCALKRTAAVGACALCSEEN*SCGRLC Trigger: GCACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCA...GAGTGCACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209516.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCATAGCAGACTGGGACAAGCCAGGCTCCTCTGCAGTATCTCCTCTGCTTGCCCAGAGAATCCAGACTaGCAGGCAAGGGCAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: VHSRLGQARLLCSISSACPENPD*QARARS Trigger: AGACCTTGCCCTTGCCTGCCAGTCTGGATTCTCTGG...GCAAGCAGAGGAGATACTGCAGAGGAGCCTGGCTTGTCCCAGTCTGCTATGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR-3UTR GCA 90 bp | CTTATGTCCATAGCAGACTGGGACAAGCCAGGCTCCTCTGCAGTATCTCCTCTGTGCTCTGAAGAGAACTaGAGCTGTGGGCGCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LMSIADWDKPGSSAVSPLCSEEN*SCGRLC Trigger: GCACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCA...CAGAGGAGATACTGCAGAGGAGCCTGGCTTGTCCCAGTCTGCTATGGACATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR CAA 90 bp | CTGGGCGGAGCTAGTACATCATGCCTCCCAGCTAAGGCTACAGCTTaGAAAAACCAGAAAGGAAGCTGCAAGGTAAGGGGCTCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LGGASTSCLPAKATA*KNQKGSCKVRGSGL Trigger: AAGCCCTGAGCCCCTTACCTTGCAGCTTCCTTTCTGGTTTTTCAAAGCTGTAGCCTTAGCTGGGAGGCATGATGTACTAGCTCCGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTCTGCCTGTGGGTCTTGTAACTTAGCTTCCCAGTCCTGCCTTTGGGGAGAGGGGAGCTTTGTTCCTTaGATCTCTGCACTCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: RSACGSCNLASQSCLWGEGSFVP*ISALRL Trigger: CAGTCTGAGTGCAGAGATTCAAGGAACAAAGCTCCC...CTCTCCCCAAAGGCAGGACTGGGAAGCTAAGTTACAAGACCCACAGGCAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTATCTCCTCTGCTTGCTGGTGGGATTTGTAAAGACTTGGGAGCATCCACCACCTTCCTGGTCTGACTaGAAGCAGGAGCAGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: QYLLCLLVGFVKTWEHPPPSWSD*KQEQLT Trigger: TGTGAGCTGCTCCTGCTTCCAGTCAGACCAGGAAGG...TGGTGGATGCTCCCAAGTCTTTACAAATCCCACCAGCAAGCAGAGGAGATACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGGCAAGGTCTGCCTGTGGGTCTTGTAACTTAGCTTCCCAGTCCTGCCTTCTAAGGCTACAGCTTTaGAAAACCAGAAAGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ARARSACGSCNLASQSCLLRLQL*KTRKEA Trigger: AGCTTCCTTTCTGGTTTTTCAAAGCTGTAGCCTTAG...AAGGCAGGACTGGGAAGCTAAGTTACAAGACCCACAGGCAGACCTTGCCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR CAA 90 bp | TCCTCTGCAGTATCTCCTCTGCTTGCTGGTGGGATTTGTAAAGACTaGGGAGCATCCACCATCTTCAAGTGTTCCATCTATCCTGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSAVSPLLAGGICKD*GASTIFKCSIYPVG Trigger: GCCTACAGGATAGATGGAACACTTGAAGATGGTGGATGCTCCCAAGTCTTTACAAATCCCACCAGCAAGCAGAGGAGATACTGCAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGGCAAGGTCTGCCTGTGGGTCTTGTAACTTAGCTTCCCAGTCCTGCCTTGTGTGTGTCTCAAAATaGCCATTTGAACAAGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: ARARSACGSCNLASQSCLVCVSK*PFEQVF Trigger: GAACACTTGTTCAAATGGTCATTTTGAGACACACAC...AAGGCAGGACTGGGAAGCTAAGTTACAAGACCCACAGGCAGACCTTGCCCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAATGACCATTTGAACAAGTGTTCTCTGCTTCCACTTATGGGTCCTGGGGTGAAGTGTGTGCTCTaGAGAGAACTGCAGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SQNDHLNKCSLLPLMGPGVKCVL*RELQLW Trigger: CCACAGCTGCAGTTCTCTTCAGAGCACACACTTCAC...CCCAGGACCCATAAGTGGAAGCAGAGAACACTTGTTCAAATGGTCATTTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR-3UTR TCA 90 bp | AGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGCAGGCTTCCTGGTTCTaGAAAGATTTTCTCACATTC | + |
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Preference number: 2 (lower is better) Translates to: SIYSRNVVVGIGEVCALKQASWF*KDFLTF Trigger: GAATGTGAGAAAATCTTTTCAGAACCAGGAAGCCTG...CTTCAGAGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209516.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAAAGTTCACATTGAGTGTCGTGATTTCAAGTATTTACAGCAGGAACGTTGTGTGAAGTGTGTGCTCTaGAGAGAACTGCAGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LKVHIECRDFKYLQQERCVKCVL*RELQLW Trigger: CCACAGCTGCAGTTCTCTTCAGAGCACACACTTCAC...ACAACGTTCCTGCTGTAAATACTTGAAATCACGACACTCAATGTGAACTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209516.2 ENSMUST00000209691.2 ENSMUST00000210317.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACAAGCTTCCTCCTTCTGTGTCCTTTATATAGGCTGCCACAAACAAAACAGATGTACTCAGCCACTTaGGTTTTAGTTAATTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: STSFLLLCPLYRLPQTKQMYSAT*VLVNSR Trigger: TCTGGAATTAACTAAAACCCAAGTGGCTGAGTACAT...CTGTTTTGTTTGTGGCAGCCTATATAAAGGACACAGAAGGAGGAAGCTTGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
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| 3UTR TCA 72 bp | CCATCTCCCTGGGGCCCCAGCATTCTCCTTGGCAGGTaGCACCAGGTAGTCCTGAGGAAAGCCATCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PSPWGPSILLGR*HQVVLRKAISR Trigger: CCTGGAGATGGCTTTCCTCAGGACTACCTGGTGTCACCTGCCAAGGAGAATGCTGGGGCCCCAGGGAGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR GCA 72 bp | GCCTCCAGGCTTGCTTGTTGGGGTCACTGGCAGGGTTaGAGGCTCTACCTTCCTGGTCTGACTGGAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: ASRLACWGHWQG*RLYLPGLTGSR Trigger: CCTGCTTCCAGTCAGACCAGGAAGGTAGAGCCTGCAACCCTGCCAGTGACCCCAACAAGCAAGCCTGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR GCA 72 bp | CTGCCTTTGGGGAGAGGAAAGCCTGGCCTCCAGGCTTaGTTGTTGGGGTCACTGGCAGGGTTGCAGGCTCTA | + |
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Preference number: 3 (lower is better) Translates to: LPLGRGKPGLQA*LLGSLAGLQAL Trigger: TAGAGCCTGCAACCCTGCCAGTGACCCCAACAAGCAAGCCTGGAGGCCAGGCTTTCCTCTCCCCAAAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR CCA 72 bp | AACCAGCGGGACACCAGCAGGGTCCACAACACACCATaGCCATCCATCAGGGCTGCCACTGCTGGTAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: NQRDTSRVHNTP*PSIRAATAGSF Trigger: GAAGCTACCAGCAGTGGCAGCCCTGATGGATGGCCATGGTGTGTTGTGGACCCTGCTGGTGTCCCGCTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
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| 3UTR TCA 72 bp | GTCACTGGCAGGGTTGCAGGCTCTACCTTCCTGGTCTaGCTGGAAGCAGGAGCAGCTCACATCAGCCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: VTGRVAGSTFLV*LEAGAAHISPL Trigger: CAGAGGGCTGATGTGAGCTGCTCCTGCTTCCAGTCAGACCAGGAAGGTAGAGCCTGCAACCCTGCCAGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR TCA 72 bp | CCTGCAGCGCTGCTCGGCAGCTCTTCCGAAGCCTGGTaGTGGTCGTCATGGACAGGCTTCCTGGTTCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PAALLGSSSEAW*WSSWTGFLVLK Trigger: TTTCAGAACCAGGAAGCCTGTCCATGACGACCATCACCAGGCTTCGGAAGAGCTGCCGAGCAGCGCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209516.2 |
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| 3UTR GCA 72 bp | AAACAGAAAGCTGCTGAACCCTCAGGTCCTGCCAGATaGTCTGAGGGCCTCTCGGTCCGCCAGCCTCATCCT | + |
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Preference number: 3 (lower is better) Translates to: KQKAAEPSGPAR*SEGLSVRQPHP Trigger: AGGATGAGGCTGGCGGACCGAGAGGCCCTCAGAGCATCTGGCAGGACCTGAGGGTTCAGCAGCTTTCTGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
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| 3UTR CCA 72 bp | TTGGGGTCACTGGCAGGGTTGCAGGCTCTACCTTCCTaGTCTGACTGGAAGCAGGAGCAGCTCACATCAGCC | + |
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Preference number: 3 (lower is better) Translates to: LGSLAGLQALPS*SDWKQEQLTSA Trigger: GGCTGATGTGAGCTGCTCCTGCTTCCAGTCAGACCAGGAAGGTAGAGCCTGCAACCCTGCCAGTGACCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR CCA 72 bp | GAAAGCCTGGCCTCCAGGCTTGCTTGTTGGGGTCACTaGCAGGGTTGCAGGCTCTACCTTCCTGGTCTGACT | + |
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Preference number: 3 (lower is better) Translates to: ESLASRLACWGH*QGCRLYLPGLT Trigger: AGTCAGACCAGGAAGGTAGAGCCTGCAACCCTGCCAGTGACCCCAACAAGCAAGCCTGGAGGCCAGGCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR TCA 72 bp | TTGGGGGACATCTGGACAGTAGTGTGGGTGCAGCTCTaGGCCCATCCACTCCTGGGCGGAGCTAGTACATCA | + |
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Preference number: 3 (lower is better) Translates to: LGDIWTVVWVQL*AHPLLGGASTS Trigger: TGATGTACTAGCTCCGCCCAGGAGTGGATGGGCTCAGAGCTGCACCCACACTACTGTCCAGATGTCCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTCCCTCCTCTGGGGGCAGGAGACAACAGGAGCCTTGCCTTAGAAGCATCGAGCTGAAGGGAGCTTaGTTCCTTGAATCTCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: PAPSSGGRRQQEPCLRSIELKGA*FLESLH Trigger: GTGCAGAGATTCAAGGAACAAAGCTCCCTTCAGCTC...GATGCTTCTAAGGCAAGGCTCCTGTTGTCTCCTGCCCCCAGAGGAGGGAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR GCA 72 bp | TCTGCCTGTGGGTCTTGTAACTTAGCTTCCCAGTCCTaGCTTTGGGGAGAGGAAAGCCTGGCCTCCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: SACGSCNLASQS*LWGEESLASRL Trigger: AAGCCTGGAGGCCAGGCTTTCCTCTCCCCAAAGGCAGGACTGGGAAGCTAAGTTACAAGACCCACAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR CCA 72 bp | CTGAATTCCATCTCCCTGGGGCCCCAGCATTCTCCTTaGCAGGTGACACCAGGTAGTCCTGAGGAAAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: LNSISLGPQHSP*QVTPGSPEESH Trigger: ATGGCTTTCCTCAGGACTACCTGGTGTCACCTGCCAAGGAGAATGCTGGGGCCCCAGGGAGATGGAATTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR TCA 72 bp | GAGTATTCAGCAGGCGGAAGCAGCCTGACCTCAGCTTaGGTCCACTGTGGTCTGTATAGCAAGATCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: EYSAGGSSLTSA*VHCGLYSKIQA Trigger: GGCCTGGATCTTGCTATACAGACCACAGTGGACTCAAGCTGAGGTCAGGCTGCTTCCGCCTGCTGAATACTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
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| 3UTR CCA 72 bp | TGTGGGTCTTGTAACTTAGCTTCCCAGTCCTGCCTTTaGGGAGAGGAAAGCCTGGCCTCCAGGCTTGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: CGSCNLASQSCL*GEESLASRLAC Trigger: ACAAGCAAGCCTGGAGGCCAGGCTTTCCTCTCCCCAAAGGCAGGACTGGGAAGCTAAGTTACAAGACCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR CCA 72 bp | ATGGGAAGCCTGGCAGCATGTGGGCAGACAAGGTGCTaGAGAGTTATGGATTTGCTAGCAAGAGCAAGCGGG | + |
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Preference number: 3 (lower is better) Translates to: MGSLAACGQTRC*RVMDLLARASG Trigger: CCCGCTTGCTCTTGCTAGCAAATCCATAACTCTCCAGCACCTTGTCTGCCCACATGCTGCCAGGCTTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAGCCTTGCCTTAGAAGCATCACGTGCCTCTGATCAGCTTCAGAAACCAAAAGGGTCACTGGCAGGGTaGCAGGCTCTACCTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RSLALEASRASDQLQKPKGSLAG*QALPSW Trigger: CCAGGAAGGTAGAGCCTGCAACCCTGCCAGTGACCC...TTTTGGTTTCTGAAGCTGATCAGAGGCACGTGATGCTTCTAAGGCAAGGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR TCA 72 bp | TCTGCACTCAGACTGACCATGAGATCTCAGTGGGACTaGATTCCATCTCCCTGGGGCCCCAGCATTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: SALRLTMRSQWD*IPSPWGPSILL Trigger: AAGGAGAATGCTGGGGCCCCAGGGAGATGGAATTCAGTCCCACTGAGATCTCATGGTCAGTCTGAGTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR CCA 72 bp | GCTTCAGAAACCAAAAGCAGTCCAGAGAATCCAGACTaGCAGGCAAGGGCAAGGTCTGCCTGTGGGTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: ASETKSSPENPD*QARARSACGSC Trigger: ACAAGACCCACAGGCAGACCTTGCCCTTGCCTGCCAGTCTGGATTCTCTGGACTGCTTTTGGTTTCTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR GCA 72 bp | ACTGGGACAAGCCAGGCTCCTCTGCAGTATCTCCTCTaGTTGCTGGTGGGATTTGTAAAGACTTGGGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: TGTSQAPLQYLL*LLVGFVKTWEH Trigger: ATGCTCCCAAGTCTTTACAAATCCCACCAGCAAGCAGAGGAGATACTGCAGAGGAGCCTGGCTTGTCCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
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| 3UTR TCA 72 bp | CATTCTAACCTGAGTATTCAGCAGGCGGAAGCAGCCTaGCCTCAGCTTGAGTCCACTGTGGTCTGTATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HSNLSIQQAEAA*PQLESTVVCIA Trigger: TGCTATACAGACCACAGTGGACTCAAGCTGAGGTCAGGCTGCTTCCGCCTGCTGAATACTCAGGTTAGAATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| 3UTR TCA 72 bp | TTTAGAAGTGCTGGATGTGATTGTGCCATTCTAACCTaGGTATTCAGCAGGCGGAAGCAGCCTGACCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FRSAGCDCAILT*VFSRRKQPDLS Trigger: GCTGAGGTCAGGCTGCTTCCGCCTGCTGAATACTCAGGTTAGAATGGCACAATCACATCCAGCACTTCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| 3UTR TCA 72 bp | TTGAAGAGGCCAGTGCTCACTGTTTCCTTGAAGCTCTaGTCTGTCCACCTCCTTATGTCCATAGCAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LKRPVLTVSLKL*SVHLLMSIADW Trigger: CCAGTCTGCTATGGACATAAGGAGGTGGACAGATCAGAGCTTCAAGGAAACAGTGAGCACTGGCCTCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCATAGCAGACTGGGACAAGCCAGGCTCCTCTGCAGTATCTCCTCTGCTTGCTCTCAAAATGACCATTaGAACAAGTGTTCTCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VHSRLGQARLLCSISSACSQNDH*NKCSLL Trigger: AAGCAGAGAACACTTGTTCAAATGGTCATTTTGAGA...GCAAGCAGAGGAGATACTGCAGAGGAGCCTGGCTTGTCCCAGTCTGCTATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| 3UTR TCA 72 bp | CAACAGGAGCCTTGCCTTAGAAGCATCACGTGCCTCTaGTCAGCTTCAGAAACCAAAAGCAGTCCAGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QQEPCLRSITCL*SASETKSSPEN Trigger: ATTCTCTGGACTGCTTTTGGTTTCTGAAGCTGATCAGAGGCACGTGATGCTTCTAAGGCAAGGCTCCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| 3UTR TCA 72 bp | GTCTCTGCACTGTGTACAATAATAGATTCACACTGCTaGCGTGTCTTGCAGCGTAGGTGGGTTGTACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSALCTIIDSHC*RVLQRRWVVHW Trigger: CCAGTGTACAACCCACCTACGCTGCAAGACACGTCAGCAGTGTGAATCTATTATTGTACACAGTGCAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| 3UTR TCA 72 bp | CCTGGTGATGGTCGTCATGGACAGGCTTCCTGGTTCTaGAAAGATTTTCTCACATTCAGCAGCTCTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGDGRHGQASWF*KDFLTFSSSQN Trigger: GTTCTGAGAGCTGCTGAATGTGAGAAAATCTTTTCAGAACCAGGAAGCCTGTCCATGACGACCATCACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209516.2 |
||
| 3UTR CCA 72 bp | TTTGAACAAGTGTTCTCTGCTTCCACTTATGGGTCCTaGGACCCAACTAAGATCATGAAGCTGGGCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FEQVFSASTYGS*DPTKIMKLGQR Trigger: TCTCTGGCCCAGCTTCATGATCTTAGTTGGGTCCCAGGACCCATAAGTGGAAGCAGAGAACACTTGTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCTCCTCTGCTTGCTGGTGGGATTTGTAAAGACTTGGGAGCATCCACCATCTAGGGAGCTTTGTTCCTaGAATCTCTGCACTCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: YLLCLLVGFVKTWEHPPSRELCS*NLCTQT Trigger: AGTCTGAGTGCAGAGATTCAAGGAACAAAGCTCCCT...AGATGGTGGATGCTCCCAAGTCTTTACAAATCCCACCAGCAAGCAGAGGAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| 3UTR TCA 72 bp | AAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTaGAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KYLQQERCGRNW*SVCSEENCSCG Trigger: CCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209516.2 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACAAGCTTCCTCCTTCTGTGTCCTTTATATAGGCTGCCACAAACAAAACAGACCAGATGTAGTCAAGTaGACACCAAGAAAAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: AQASSFCVLYIGCHKQNRPDVVK*TPRKAT Trigger: GGTGGCTTTTCTTGGTGTCAACTTGACTACATCTGG...TCTGTTTTGTTTGTGGCAGCCTATATAAAGGACACAGAAGGAGGAAGCTTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| 3UTR CCA 72 bp | TATCTCCTCTGCTTGCTGGTGGGATTTGTAAAGACTTaGGAGCATCCACCATCTTCAAGTGTTCCATCTATC | + |
|
Preference number: 3 (lower is better) Translates to: YLLCLLVGFVKT*EHPPSSSVPSI Trigger: GATAGATGGAACACTTGAAGATGGTGGATGCTCCCAAGTCTTTACAAATCCCACCAGCAAGCAGAGGAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGATGTAGTCAAGTTGACACCAAGAAAAGCCACCCCAGGGACCAATCTAAGTCAGTGATAACTCAATaGCTTTTCTTGTCAGACGGT | + |
|
Preference number: 3 (lower is better) Translates to: SRCSQVDTKKSHPRDQSKSVITQ*LFLSDG Trigger: ACCGTCTGACAAGAAAAGCAATTGAGTTATCACTGA...CTTAGATTGGTCCCTGGGGTGGCTTTTCTTGGTGTCAACTTGACTACATCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| 3UTR TCA 72 bp | CTCAGTGATAACTCAATTGCTTTTCTTGTCAGACGGTaGCCAGAGCGTTCAACATCAGCCCAAATGACACAT | + |
|
Preference number: 3 (lower is better) Translates to: LSDNSIAFLVRR*PERSTSAQMTH Trigger: ATGTGTCATTTGGGCTGATGTTGAACGCTCTGGTCACCGTCTGACAAGAAAAGCAATTGAGTTATCACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| 3UTR TCA 72 bp | TATGTCACAAGAACCTTATACACATTAAACATGAGGTaGCTTGAAGAGGCCAGTGCTCACTGTTTCCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: YVTRTLYTLNMR*LEEASAHCFLE Trigger: TTCAAGGAAACAGTGAGCACTGGCCTCTTCAAGTCACCTCATGTTTAATGTGTATAAGGTTCTTGTGACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | CAGAACCAGTCCACACAGCCCGCACCAGGTCAGGATGCAGCAGCCATCCCTAGCTGGCCTCGTCCAGGCTaGAGCTGCTCTCGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QNQSTQPAPGQDAAAIPSWPRPG*SCSRPR Trigger: TCGAGGGCGAGAGCAGCTCCAGCCTGGACGAGGCCA...GCTAGGGATGGCTGCTGCATCCTGACCTGGTGCGGGCTGTGTGGACTGGTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTCAGAACCAGTCCACACAGCCCGCACCAGGTCAGGATGCAGCAGCCATCCGGTTCAAGTCTGTCCTaGTGGCCTCGTCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRTSPHSPHQVRMQQPSGSSLS*WPRPGW Trigger: CCAGCCTGGACGAGGCCATCAGGACAGACTTGAACC...GGATGGCTGCTGCATCCTGACCTGGTGCGGGCTGTGTGGACTGGTTCTGAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR CCA 90 bp | CACAAACAGGCAGATGAACCAGCGGGACACCAGCAGGGTCCACAACACACCATGTGGCCTCGTCCAGGCTaGAGCTGCTCTCGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HKQADEPAGHQQGPQHTMWPRPG*SCSRPR Trigger: TCGAGGGCGAGAGCAGCTCCAGCCTGGACGAGGCCA...CATGGTGTGTTGTGGACCCTGCTGGTGTCCCGCTGGTTCATCTGCCTGTTTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTGTTGGCCTCGTCCAGGCTaGAGCTGCTCTCGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VGIGEVCALKRTAAVGACWPRPG*SCSRPR Trigger: TCGAGGGCGAGAGCAGCTCCAGCCTGGACGAGGCCA...ACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165605.4 ENSMUST00000210317.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCGGTTCAAGTCTGTCCTaGTGGCCTCGTCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVGIGEVCALKRTAAVGAGSSLS*WPRPGW Trigger: CCAGCCTGGACGAGGCCATCAGGACAGACTTGAACC...GGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165605.4 ENSMUST00000210317.2 |
||
| CDS-3UTR TCA 90 bp | CAGAACCAGTCCACACAGCCCGCACCAGGTCAGGATGCAGCAGCCATCCCTAGCTTTTGGAGCCCTCATTaGACAGACAGTCCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: QNQSTQPAPGQDAAAIPSFWSPH*TDSPRS Trigger: GGATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAA...GCTAGGGATGGCTGCTGCATCCTGACCTGGTGCGGGCTGTGTGGACTGGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTCAGAACCAGTCCACACAGCCCGCACCAGGTCAGGATGCAGCAGCCATCCTCCCCTTTGGTGATCTaGTTAAACTTGTCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALRTSPHSPHQVRMQQPSSPLVI*LNLSQM Trigger: CATCTGTGACAAGTTTAAGCAGATCACCAAAGGGGA...GGATGGCTGCTGCATCCTGACCTGGTGCGGGCTGTGTGGACTGGTTCTGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR GCA 90 bp | TCCGCCAGCCTCATCCTACCTCACATTCAGCAGCTCTCAGAACCAGTCCACACAGGCCGCCTGCATGAATaGGTGACACTCTGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SASLILPHIQQLSEPVHTGRLHE*VTLCHK Trigger: TTTGTGACAGAGTGTCACGCATTCATGCAGGCGGCC...TGTGTGGACTGGTTCTGAGAGCTGCTGAATGTGAGGTAGGATGAGGCTGGCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| 3UTR CAA 72 bp | GCCATCTCCAGGTACACCTTTAAGGTACAAACGACCTaGGGGGACATCTGGACAGTAGTGTGGGTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AISRYTFKVQTT*GDIWTVVWVQL Trigger: GAGCTGCACCCACACTACTGTCCAGATGTCCCCCAAGGTCGTTTGTACCTTAAAGGTGTACCTGGAGATGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| 3UTR CAA 72 bp | GGGACAAGCCAGGCTCCTCTGCAGTATCTCCTCTGCTaGCTGGTGGGATTTGTAAAGACTTGGGAGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTSQAPLQYLLC*LVGFVKTWEHP Trigger: TGGATGCTCCCAAGTCTTTACAAATCCCACCAGCAAGCAGAGGAGATACTGCAGAGGAGCCTGGCTTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTTGTACAGGGTCTTCTaGAGACAAGGATCCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVGIGEVCALKRTAAVGALYRVF*RQGSAV Trigger: GACAGCGGATCCTTGTCTCCAGAAGACCCTGTACAA...GGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | TCCGCCAGCCTCATCCTACCTCACATTCAGCAGCTCTCAGAACCAGTCCACACATTGTACAGGGTCTTCTaGAGACAAGGATCCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SASLILPHIQQLSEPVHTLYRVF*RQGSAV Trigger: GACAGCGGATCCTTGTCTCCAGAAGACCCTGTACAA...TGTGTGGACTGGTTCTGAGAGCTGCTGAATGTGAGGTAGGATGAGGCTGGCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| 3UTR CAA 72 bp | GCATGTGGGCAGACAAGGTGCTGGAGAGTTATGGATTaGCTAGCAAGAGCAAGCGGGCAAAGCACAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACGQTRCWRVMD*LARASGQSTSF Trigger: GAAGCTTGTGCTTTGCCCGCTTGCTCTTGCTAGCAAATCCATAACTCTCCAGCACCTTGTCTGCCCACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTTGGGGTCACTGGCAGGGTTGCAGGCTCTACCTTCCTGGTCTGACTGGTCCCCTTTGGTGATCTaGTTAAACTTGTCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CLLGSLAGLQALPSWSDWSPLVI*LNLSQM Trigger: CATCTGTGACAAGTTTAAGCAGATCACCAAAGGGGA...CCAGTCAGACCAGGAAGGTAGAGCCTGCAACCCTGCCAGTGACCCCAACAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGCACTATGTGGGAACTCAGAAACCTGCCAGGTGTGGTTAAGGACTCCTCCTTGTACAGGGTCTTCTaGAGACAAGGATCCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTMWELRNLPGVVKDSSLYRVF*RQGSAV Trigger: GACAGCGGATCCTTGTCTCCAGAAGACCCTGTACAA...GGAGGAGTCCTTAACCACACCTGGCAGGTTTCTGAGTTCCCACATAGTGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTTGGCCTCGTCCAGGCTaGAGCTGCTCTCGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ISSIYSRNVVVGIGEVCAWPRPG*SCSRPR Trigger: TCGAGGGCGAGAGCAGCTCCAGCCTGGACGAGGCCA...AGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165605.4 ENSMUST00000210317.2 |
||
| 3UTR CAA 72 bp | CAGGTCAGGATGCAGCAGCCATCCCTAGCCTCACGATaGATTCCCATAGGTGCCACAGATGATTATGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QVRMQQPSLASR*IPIGATDDYVL Trigger: TAGGACATAATCATCTGTGGCACCTATGGGAATCAATCGTGAGGCTAGGGATGGCTGCTGCATCCTGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTCAGATACCCAGCTATaGAATTCATTCCTGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVGIGEVCALKRTAAVGASDTQL*NSFLSE Trigger: CTCTGACAGGAATGAATTTCATAGCTGGGTATCTGA...GGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165605.4 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAACCAGTCCACACAGCCCGCACCAGGTCAGGATGCAGCAGCCATCCCTATAAATTCCTGGTGTTaGTTAATTAAGGTCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQNQSTQPAPGQDAAAIPINSWC*LIKVRA Trigger: TGCTCTGACCTTAATTAAGCAACACCAGGAATTTAT...AGGGATGGCTGCTGCATCCTGACCTGGTGCGGGCTGTGTGGACTGGTTCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGGTTCAAGTCTGTCCTaGTGGCCTCGTCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VISSIYSRNVVVGIGEVCGSSLS*WPRPGW Trigger: CCAGCCTGGACGAGGCCATCAGGACAGACTTGAACC...ACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165605.4 ENSMUST00000210317.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGCTTCCTCCTTCTGTGTCCTTTATATAGGCTGCCACAAACAAAACAGATTGGTTCAAGTCTGTCCTaGTGGCCTCGTCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSFLLLCPLYRLPQTKQIGSSLS*WPRPGW Trigger: CCAGCCTGGACGAGGCCATCAGGACAGACTTGAACC...AATCTGTTTTGTTTGTGGCAGCCTATATAAAGGACACAGAAGGAGGAAGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| CDS-3UTR TCA 90 bp | AACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGTTTTGGAGCCCTCATTaGACAGACAGTCCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: NVVVGIGEVCALKRTAAVFWSPH*TDSPRS Trigger: GGATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAA...CACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR TCA 90 bp | TCTGATCAGCTTCAGAAACCAAAAGCAGTCCAGAGAATCCAGACTGGCAGGCAATTTTGGAGCCCTCATTaGACAGACAGTCCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SDQLQKPKAVQRIQTGRQFWSPH*TDSPRS Trigger: GGATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAA...TTGCCTGCCAGTCTGGATTCTCTGGACTGCTTTTGGTTTCTGAAGCTGATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR GCA 90 bp | AACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGAGAACTTCGCAATCCTaGGGAAGACCCAGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVVVGIGEVCALKRTAAVRTSQS*GRPRFL Trigger: CAGAAACCTGGGTCTTCCGCAGGATTGCGAAGTTCT...CACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165605.4 |
||
| CDS-3UTR GCA 90 bp | GTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTGTTCCCCTTTGGTGATCTaGTTAAACTTGTCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VGIGEVCALKRTAAVGACSPLVI*LNLSQM Trigger: CATCTGTGACAAGTTTAAGCAGATCACCAAAGGGGA...ACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTGTTATGTCCTGCATGAATaGGTGACACTCTGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGIGEVCALKRTAAVGACYVLHE*VTLCHK Trigger: TTTGTGACAGAGTGTCACGCATTCATGCAGGACATA...ACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209516.2 |
||
| 3UTR CAA 72 bp | GTCATCAGAGCCTCAGTGATAACTCAATTGCTTTTCTaGTCAGACGGTGACCAGAGCGTTCAACATCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VIRASVITQLLF*SDGDQSVQHQP Trigger: GGGCTGATGTTGAACGCTCTGGTCACCGTCTGACAAGAAAAGCAATTGAGTTATCACTGAGGCTCTGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| 3UTR CAA 72 bp | TGTGAGGGGGTCATCAGAGCCTCAGTGATAACTCAATaGCTTTTCTTGTCAGACGGTGACCAGAGCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CEGVIRASVITQ*LFLSDGDQSVQ Trigger: TTGAACGCTCTGGTCACCGTCTGACAAGAAAAGCAATTGAGTTATCACTGAGGCTCTGATGACCCCCTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| CDS-3UTR GCA 90 bp | GTGATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTAGACCCAGGTTTCTGTaGGCAGCACTGGCAGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: VISSIYSRNVVVGIGEVCRPRFL*AALAVP Trigger: GGGTACTGCCAGTGCTGCGCACAGAAACCTGGGTCT...ACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165605.4 |
||
| CDS-3UTR CCA 90 bp | GGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTGTGCAGTATCACCAGGTACGTaGAAAAGAATTCTTCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GIGEVCALKRTAAVGACAVSPGT*KRILHK Trigger: CTTATGAAGAATTCTTTTCCACGTACCTGGTGATAC...TGCACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGGTCAGGATGCAGCAGCCATCCCTAGCCTCACGATTGATTCCCATAGGTGTATCACCAGGTACGTaGAAAAGAATTCTTCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: HQVRMQQPSLASRLIPIGVSPGT*KRILHK Trigger: CTTATGAAGAATTCTTTTCCACGTACCTGGTGATAC...ACCTATGGGAATCAATCGTGAGGCTAGGGATGGCTGCTGCATCCTGACCTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR CCA 90 bp | AACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGCTTGTCACAGATGTCTaGAATACTGCTGGCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NVVVGIGEVCALKRTAAVLVTDV*NTAGFQ Trigger: TTGGAAGCCAGCAGTATTCCAGACATCTGTGACAAG...CACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | TCTGATCAGCTTCAGAAACCAAAAGCAGTCCAGAGAATCCAGACTGGCAGGCAACTTGTCACAGATGTCTaGAATACTGCTGGCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDQLQKPKAVQRIQTGRQLVTDV*NTAGFQ Trigger: TTGGAAGCCAGCAGTATTCCAGACATCTGTGACAAG...TTGCCTGCCAGTCTGGATTCTCTGGACTGCTTTTGGTTTCTGAAGCTGATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTGTATAAATTCCTGGTGTTaGTTAATTAAGGTCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGIGEVCALKRTAAVGACINSWC*LIKVRA Trigger: TGCTCTGACCTTAATTAAGCAACACCAGGAATTTAT...ACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR GCA 90 bp | AACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGTCCCCTTTGGTGATCTaGTTAAACTTGTCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NVVVGIGEVCALKRTAAVSPLVI*LNLSQM Trigger: CATCTGTGACAAGTTTAAGCAGATCACCAAAGGGGA...CACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCCTGGGACCCAACTAAGATCATGAAGCTGGGCCAGAGAATTCAGTTTATGGATTTTCTGCATGAATaGGTGACACTCTGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSWDPTKIMKLGQRIQFMDFLHE*VTLCHK Trigger: TTTGTGACAGAGTGTCACGCATTCATGCAGAAAATC...CATAAACTGAATTCTCTGGCCCAGCTTCATGATCTTAGTTGGGTCCCAGGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | GTCGTGATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTTGTACAGGGTCTTCTaGAGACAAGGATCCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVISSIYSRNVVVGIGEVLYRVF*RQGSAV Trigger: GACAGCGGATCCTTGTCTCCAGAAGACCCTGTACAA...CACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAATCACGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| 3UTR CAA 72 bp | GAATGCGCGAGTGTGTGTGTGTCTCAAAATGACCATTaGAACAAGTGTTCTCTGCTTCCACTTATGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECASVCVSQNDH*NKCSLLPLMGP Trigger: AGGACCCATAAGTGGAAGCAGAGAACACTTGTTCAAATGGTCATTTTGAGACACACACACACTCGCGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| 3UTR CAA 72 bp | GTATCTCCTCTGCTTGCTGGTGGGATTTGTAAAGACTaGGGAGCATCCACCATCTTCAAGTGTTCCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPLLAGGICKD*GASTIFKCSIY Trigger: ATAGATGGAACACTTGAAGATGGTGGATGCTCCCAAGTCTTTACAAATCCCACCAGCAAGCAGAGGAGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTTTTTGGAGCCCTCATTaGACAGACAGTCCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VISSIYSRNVVVGIGEVCFWSPH*TDSPRS Trigger: GGATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAA...ACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | ATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGACTTGTCACAGATGTCTaGAATACTGCTGGCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IYSRNVVVGIGEVCALKRLVTDV*NTAGFQ Trigger: TTGGAAGCCAGCAGTATTCCAGACATCTGTGACAAG...TCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| 3UTR CAA 72 bp | GTGGGTTGTACACTGGGCATCAGCTCACGTAATGCATaGCCTGTAACGATGCTAATAAAAAGTCTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGCTLGISSRNA*PVTMLIKSLLL Trigger: AAGAAGGAGACTTTTTATTAGCATCGTTACAGGCAATGCATTACGTGAGCTGATGCCCAGTGTACAACCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGATGTAGTCAAGTTGACACCAAGAAAAGCCACCCCAGGGACCAATCTAAGGTATCACCAGGTACGTaGAAAAGAATTCTTCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRCSQVDTKKSHPRDQSKVSPGT*KRILHK Trigger: CTTATGAAGAATTCTTTTCCACGTACCTGGTGATAC...CTTAGATTGGTCCCTGGGGTGGCTTTTCTTGGTGTCAACTTGACTACATCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| CDS-3UTR GCA 90 bp | AGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGGATTTTCTGCATGAATaGGTGACACTCTGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIYSRNVVVGIGEVCALKDFLHE*VTLCHK Trigger: TTTGTGACAGAGTGTCACGCATTCATGCAGAAAATC...CTTCAGAGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTAGTACATCATGCCTCCCAGCTAAGGCTACAGCTTTGAAAAACCAGAAAGTATCACCAGGTACGTaGAAAAGAATTCTTCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GASTSCLPAKATALKNQKVSPGT*KRILHK Trigger: CTTATGAAGAATTCTTTTCCACGTACCTGGTGATAC...TTTCTGGTTTTTCAAAGCTGTAGCCTTAGCTGGGAGGCATGATGTACTAGCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | ATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAGTATCACCAGGTACGTaGAAAAGAATTCTTCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: IYSRNVVVGIGEVCALKRVSPGT*KRILHK Trigger: CTTATGAAGAATTCTTTTCCACGTACCTGGTGATAC...TCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAAGTTCACATTGAGTGTCGTGATTTCAAGTATTTACAGCAGGAACGTTGTTTGTACAGGGTCTTCTaGAGACAAGGATCCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKVHIECRDFKYLQQERCLYRVF*RQGSAV Trigger: GACAGCGGATCCTTGTCTCCAGAAGACCCTGTACAA...ACAACGTTCCTGCTGTAAATACTTGAAATCACGACACTCAATGTGAACTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCACATCGCCTGACTTTATTATTTCAAAAGCTTTTTAGAAGTGCTGGATGTCTTGTCACAGATGTCTaGAATACTGCTGGCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPHRLTLLFQKLFRSAGCLVTDV*NTAGFQ Trigger: TTGGAAGCCAGCAGTATTCCAGACATCTGTGACAAG...ACATCCAGCACTTCTAAAAAGCTTTTGAAATAATAAAGTCAGGCGATGTGGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTGATTTTCTGCATGAATaGGTGACACTCTGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISSIYSRNVVVGIGEVCADFLHE*VTLCHK Trigger: TTTGTGACAGAGTGTCACGCATTCATGCAGAAAATC...AGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR GCA 90 bp | GTGATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTATAAATTCCTGGTGTTaGTTAATTAAGGTCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VISSIYSRNVVVGIGEVCINSWC*LIKVRA Trigger: TGCTCTGACCTTAATTAAGCAACACCAGGAATTTAT...ACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAATCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGATGCTCTGAGGGCCTCTCGGTCCGCCAGCCTCATCCTACCTCACATTCATACCCCACGTCTGGGTaGTGTAGCCCATATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARCSEGLSVRQPHPTSHSYPTSG*CSPYAR Trigger: CCTGGCATATGGGCTACACAACCCAGACGTGGGGTA...TGAATGTGAGGTAGGATGAGGCTGGCGGACCGAGAGGCCCTCAGAGCATCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS TCA 90 bp | TCCGAAACATCACGTTGTCAGGGAATGTCCGGTTCAAGTCTGTCCTaGTGGCCTCGTCCAGGCTGGAGCTGCTCTCGCCCTCGAGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SETSRCQGMSGSSLS*WPRPGWSCSRPRAV Trigger: GACTGCTCGAGGGCGAGAGCAGCTCCAGCCTGGACGAGGCCATCAGGACAGACTTGAACCGGACATTCCCTGACAACGTGATGTTTCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
||
| CDS CCA 90 bp | GAACTTCGCAATCCTGCGGAAGACCCAGGTTTCTGTGCGCAGCACTaGCAGTACCCCACGTCTGGGTTGTGTAGCCCATATGCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELRNPAEDPGFCAQH*QYPTSGLCSPYARS Trigger: GCTCCTGGCATATGGGCTACACAACCCAGACGTGGGGTACTGCCAGTGCTGCGCACAGAAACCTGGGTCTTCCGCAGGATTGCGAAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165605.4 |
||
| CDS-3UTR CAA 90 bp | AGCTCTCAGAACCAGTCCACACAGCCCGCACCAGGTCAGGATGCAGCAGCCATCCATTTGATCGCCCTCTaGGTGAGTATCACCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSQNQSTQPAPGQDAAAIHLIAL*VSITRY Trigger: GTACCTGGTGATACTCACCAAGAGGGCGATCAAATG...GATGGCTGCTGCATCCTGACCTGGTGCGGGCTGTGTGGACTGGTTCTGAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS CCA 90 bp | GGGTTGTGTAGCCCATATGCCAGGAGCACGTTGTACAGGGTCTTCTaGAGACAAGGATCCGCTGTCTTCCGAAACATCACGTTGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLCSPYARSTLYRVF*RQGSAVFRNITLSG Trigger: CCCTGACAACGTGATGTTTCGGAAGACAGCGGATCCTTGTCTCCAGAAGACCCTGTACAACGTGCTCCTGGCATATGGGCTACACAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
||
| CDS GCA 90 bp | ATACCCAGCTATGAAATTCATTCCTGTCAGAGAACTTCGCAATCCTaGGGAAGACCCAGGTTTCTGTGCGCAGCACTGGCAGTACCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IPSYEIHSCQRTSQS*GRPRFLCAALAVPH Trigger: GTGGGGTACTGCCAGTGCTGCGCACAGAAACCTGGGTCTTCCGCAGGATTGCGAAGTTCTCTGACAGGAATGAATTTCATAGCTGGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165605.4 |
||
| CDS-3UTR CAA 90 bp | CCTCTCGGTCCGCCAGCCTCATCCTACCTCACATTCAGCAGCTCTCAGAACCAGTTTCCTTTTAGAAGTTaGGACCATTTGATCGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLGPPASSYLTFSSSQNQFPFRS*DHLIAL Trigger: GAGGGCGATCAAATGGTCCAAACTTCTAAAAGGAAA...CTGGTTCTGAGAGCTGCTGAATGTGAGGTAGGATGAGGCTGGCGGACCGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR CAA 90 bp | AACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGTACCCCACGTCTGGGTaGTGTAGCCCATATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NVVVGIGEVCALKRTAAVYPTSG*CSPYAR Trigger: CCTGGCATATGGGCTACACAACCCAGACGTGGGGTA...CACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | TCTGATCAGCTTCAGAAACCAAAAGCAGTCCAGAGAATCCAGACTGGCAGGCAATACCCCACGTCTGGGTaGTGTAGCCCATATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SDQLQKPKAVQRIQTGRQYPTSG*CSPYAR Trigger: CCTGGCATATGGGCTACACAACCCAGACGTGGGGTA...TTGCCTGCCAGTCTGGATTCTCTGGACTGCTTTTGGTTTCTGAAGCTGATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGCAAGGGCCCAGACTAAAACAGAAAGCTGCTGAACCCTCAGGTCCTGCCATTTTGGAGCCCTCATaGAACAGACAGTCCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: TQQGPRLKQKAAEPSGPAILEPS*NRQSQI Trigger: GATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAAT...GGCAGGACCTGAGGGTTCAGCAGCTTTCTGTTTTAGTCTGGGCCCTTGCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCTCTCGGTCCGCCAGCCTCATCCTACCTCACATTCAGCAGCTCTCAGAACGTGATCTGCTTAAACTaGTCACAGATGTCTGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: GPLGPPASSYLTFSSSQNVICLN*SQMSGI Trigger: TATTCCAGACATCTGTGACAAGTTTAAGCAGATCAC...GTTCTGAGAGCTGCTGAATGTGAGGTAGGATGAGGCTGGCGGACCGAGAGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
||
| CDS-3UTR CAA 90 bp | ACAAACGACCTTGGGGGACATCTGGACAGTAGTGTGGGTGCAGCTCTGAGCCCAGTCACAAAGTCCCCTTaGGTGATCTGCTTAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNDLGGHLDSSVGAALSPVTKSP*VICLNL Trigger: CAAGTTTAAGCAGATCACCAAAGGGGACTTTGTGAC...TGGGCTCAGAGCTGCACCCACACTACTGTCCAGATGTCCCCCAAGGTCGTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | CTTATGTCCATAGCAGACTGGGACAAGCCAGGCTCCTCTGCAGTATCTCCTCTGATTTTGGAGCCCTCATaGAACAGACAGTCCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LMSIADWDKPGSSAVSPLILEPS*NRQSQI Trigger: GATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAAT...CAGAGGAGATACTGCAGAGGAGCCTGGCTTGTCCCAGTCTGCTATGGACATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | GGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTGTGCATTTCCTTTTAGAAGTTaGGACCATTTGATCGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GIGEVCALKRTAAVGACAFPFRS*DHLIAL Trigger: GAGGGCGATCAAATGGTCCAAACTTCTAAAAGGAAA...TGCACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | GCACAAGCTTCCTCCTTCTGTGTCCTTTATATAGGCTGCCACAAACAAAACAGATACCCCACGTCTGGGTaGTGTAGCCCATATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQASSFCVLYIGCHKQNRYPTSG*CSPYAR Trigger: CCTGGCATATGGGCTACACAACCCAGACGTGGGGTA...TCTGTTTTGTTTGTGGCAGCCTATATAAAGGACACAGAAGGAGGAAGCTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| CDS TCA 90 bp | CTTCCGAAGCCTGGTGATGGTCGTCATGGACAGGCTTCCTGGTTCTaGAAAGATTTTCTGCATGAATGCGTGACACTCTGTCACAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPKPGDGRHGQASWF*KDFLHECVTLCHKV Trigger: GACTTTGTGACAGAGTGTCACGCATTCATGCAGAAAATCTTTTCAGAACCAGGAAGCCTGTCCATGACGACCATCACCAGGCTTCGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | GGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGGCGCCTGTGCAGTGATCTGCTTAAACTaGTCACAGATGTCTGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: GIGEVCALKRTAAVGACAVICLN*SQMSGI Trigger: TATTCCAGACATCTGTGACAAGTTTAAGCAGATCAC...TGCACAGGCGCCCACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGTACATCATGCCTCCCAGCTAAGGCTACAGCTTTGAAAAACCAGAAAGGACATTTGATCGCCCTCTaGGTGAGTATCACCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ASTSCLPAKATALKNQKGHLIAL*VSITRY Trigger: GTACCTGGTGATACTCACCAAGAGGGCGATCAAATG...TCCTTTCTGGTTTTTCAAAGCTGTAGCCTTAGCTGGGAGGCATGATGTACTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | GTGATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTTACCCCACGTCTGGGTaGTGTAGCCCATATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VISSIYSRNVVVGIGEVCYPTSG*CSPYAR Trigger: CCTGGCATATGGGCTACACAACCCAGACGTGGGGTA...ACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | AGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGCATTTGATCGCCCTCTaGGTGAGTATCACCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SIYSRNVVVGIGEVCALKHLIAL*VSITRY Trigger: GTACCTGGTGATACTCACCAAGAGGGCGATCAAATG...CTTCAGAGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | ATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGACATTTGATCGCCCTCTaGGTGAGTATCACCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IYSRNVVVGIGEVCALKRHLIAL*VSITRY Trigger: GTACCTGGTGATACTCACCAAGAGGGCGATCAAATG...TCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | CAGTATCTCCTCTGCTTGCTGGTGGGATTTGTAAAGACTTGGGAGCATCCACCATTTCCTTTTAGAAGTTaGGACCATTTGATCGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QYLLCLLVGFVKTWEHPPFPFRS*DHLIAL Trigger: GAGGGCGATCAAATGGTCCAAACTTCTAAAAGGAAA...TGGTGGATGCTCCCAAGTCTTTACAAATCCCACCAGCAAGCAGAGGAGATACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | AACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAACTGCAGCTGTGGTCACAAAGTCCCCTTaGGTGATCTGCTTAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NVVVGIGEVCALKRTAAVVTKSP*VICLNL Trigger: CAAGTTTAAGCAGATCACCAAAGGGGACTTTGTGAC...CACAGCTGCAGTTCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCTTCCTCCTTCTGTGTCCTTTATATAGGCTGCCACAAACAAAACAGATTTCATTTGATCGCCCTCTaGGTGAGTATCACCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QASSFCVLYIGCHKQNRFHLIAL*VSITRY Trigger: GTACCTGGTGATACTCACCAAGAGGGCGATCAAATG...AAATCTGTTTTGTTTGTGGCAGCCTATATAAAGGACACAGAAGGAGGAAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
||
| CDS-3UTR CAA 90 bp | GTCGTGATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGATTTTGGAGCCCTCATaGAACAGACAGTCCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VVISSIYSRNVVVGIGEVILEPS*NRQSQI Trigger: GATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAAT...CACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAATCACGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
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| CDS GCA 90 bp | CAGATGTCTGGAATACTGCTGGCTTCCAATATAAATTCCTGGTGTTaGTTAATTAAGGTCAGAGCAACCCGGAATATGATTTTGGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: QMSGILLASNINSWC*LIKVRATRNMILEP Trigger: GGGCTCCAAAATCATATTCCGGGTTGCTCTGACCTTAATTAAGCAACACCAGGAATTTATATTGGAAGCCAGCAGTATTCCAGACATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS-3UTR CAA 90 bp | ATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGCTCTGAAGAGAGTGATCTGCTTAAACTaGTCACAGATGTCTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: IYSRNVVVGIGEVCALKRVICLN*SQMSGI Trigger: TATTCCAGACATCTGTGACAAGTTTAAGCAGATCAC...TCTCTTCAGAGCACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
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| CDS-3UTR CAA 90 bp | GTGATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGTGTGTCACAAAGTCCCCTTaGGTGATCTGCTTAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: VISSIYSRNVVVGIGEVCVTKSP*VICLNL Trigger: CAAGTTTAAGCAGATCACCAAAGGGGACTTTGTGAC...ACACACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
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| CDS CCA 90 bp | CACAAAGTCCCCTTTGGTGATCTGCTTAAACTTGTCACAGATGTCTaGAATACTGCTGGCTTCCAATATAAATTCCTGGTGTTGCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: HKVPFGDLLKLVTDV*NTAGFQYKFLVLLN Trigger: ATTAAGCAACACCAGGAATTTATATTGGAAGCCAGCAGTATTCCAGACATCTGTGACAAGTTTAAGCAGATCACCAAAGGGGACTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS-3UTR CAA 90 bp | ACAAGCTTCCTCCTTCTGTGTCCTTTATATAGGCTGCCACAAACAAAACAGATTTTTCCTTTTAGAAGTTaGGACCATTTGATCGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: TSFLLLCPLYRLPQTKQIFPFRS*DHLIAL Trigger: GAGGGCGATCAAATGGTCCAAACTTCTAAAAGGAAA...AATCTGTTTTGTTTGTGGCAGCCTATATAAAGGACACAGAAGGAGGAAGCTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209895.2 |
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| CDS-3UTR CAA 90 bp | GTCGTGATTTCAAGTATTTACAGCAGGAACGTTGTGGTAGGAATTGGTGAAGTGGTGATCTGCTTAAACTaGTCACAGATGTCTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: VVISSIYSRNVVVGIGEVVICLN*SQMSGI Trigger: TATTCCAGACATCTGTGACAAGTTTAAGCAGATCAC...CACTTCACCAATTCCTACCACAACGTTCCTGCTGTAAATACTTGAAATCACGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
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| CDS CCA 90 bp | TTGTCACAGATGTCTGGAATACTGCTGGCTTCCAATATAAATTCCTaGTGTTGCTTAATTAAGGTCAGAGCAACCCGGAATATGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: LSQMSGILLASNINS*CCLIKVRATRNMIL Trigger: CAAAATCATATTCCGGGTTGCTCTGACCTTAATTAAGCAACACCAGGAATTTATATTGGAAGCCAGCAGTATTCCAGACATCTGTGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS-3UTR CAA 90 bp | TTAAAAGTTCACATTGAGTGTCGTGATTTCAAGTATTTACAGCAGGAACGTTGTATTTTGGAGCCCTCATaGAACAGACAGTCCCAGATC | + |
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Preference number: 5 (lower is better) Translates to: LKVHIECRDFKYLQQERCILEPS*NRQSQI Trigger: GATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAAT...ACAACGTTCCTGCTGTAAATACTTGAAATCACGACACTCAATGTGAACTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
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| CDS-3UTR CAA 90 bp | CCACATCGCCTGACTTTATTATTTCAAAAGCTTTTTAGAAGTGCTGGATGTGATGTCACAAAGTCCCCTTaGGTGATCTGCTTAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: PHRLTLLFQKLFRSAGCDVTKSP*VICLNL Trigger: CAAGTTTAAGCAGATCACCAAAGGGGACTTTGTGAC...ATCACATCCAGCACTTCTAAAAAGCTTTTGAAATAATAAAGTCAGGCGATGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211128.2 |
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| CDS-3UTR CAA 90 bp | TTAAAAGTTCACATTGAGTGTCGTGATTTCAAGTATTTACAGCAGGAACGTTGTTTTCCTTTTAGAAGTTaGGACCATTTGATCGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: LKVHIECRDFKYLQQERCFPFRS*DHLIAL Trigger: GAGGGCGATCAAATGGTCCAAACTTCTAAAAGGAAA...ACAACGTTCCTGCTGTAAATACTTGAAATCACGACACTCAATGTGAACTTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
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| CDS TCA 72 bp | TCACGTTGTCAGGGAATGTCCGGTTCAAGTCTGTCCTaGTGGCCTCGTCCAGGCTGGAGCTGCTCTCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SRCQGMSGSSLS*WPRPGWSCSRP Trigger: AGGGCGAGAGCAGCTCCAGCCTGGACGAGGCCATCAGGACAGACTTGAACCGGACATTCCCTGACAACGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 90 bp | GACCCAGGTTTCTGTGCGCAGCACTGGCAGTACCCCACGTCTGGGTaGTGTAGCCCATATGCCAGGAGCACGTTGTACAGGGTCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: DPGFCAQHWQYPTSG*CSPYARSTLYRVFW Trigger: CCAGAAGACCCTGTACAACGTGCTCCTGGCATATGGGCTACACAACCCAGACGTGGGGTACTGCCAGTGCTGCGCACAGAAACCTGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165605.4 |
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| CDS CAA 72 bp | TTCTGTGCGCAGCACTGGCAGTACCCCACGTCTGGGTaGTGTAGCCCATATGCCAGGAGCACGTTGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: FCAQHWQYPTSG*CSPYARSTLYR Trigger: CCTGTACAACGTGCTCCTGGCATATGGGCTACACAACCCAGACGTGGGGTACTGCCAGTGCTGCGCACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165605.4 |
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| CDS CAA 72 bp | ACGTCTGGGTTGTGTAGCCCATATGCCAGGAGCACGTaGTACAGGGTCTTCTGGAGACAAGGATCCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: TSGLCSPYARST*YRVFWRQGSAV Trigger: GACAGCGGATCCTTGTCTCCAGAAGACCCTGTACAACGTGCTCCTGGCATATGGGCTACACAACCCAGACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 90 bp | AGGGTCTTCTGGAGACAAGGATCCGCTGTCTTCCGAAACATCACGTaGTCAGGGAATGTCCGGTTCAAGTCTGTCCTGATGGCCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: RVFWRQGSAVFRNIT*SGNVRFKSVLMASS Trigger: GGACGAGGCCATCAGGACAGACTTGAACCGGACATTCCCTGACAACGTGATGTTTCGGAAGACAGCGGATCCTTGTCTCCAGAAGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CCA 72 bp | AGCCCATATGCCAGGAGCACGTTGTACAGGGTCTTCTaGAGACAAGGATCCGCTGTCTTCCGAAACATCACG | + |
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Preference number: 6 (lower is better) Translates to: SPYARSTLYRVF*RQGSAVFRNIT Trigger: CGTGATGTTTCGGAAGACAGCGGATCCTTGTCTCCAGAAGACCCTGTACAACGTGCTCCTGGCATATGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 90 bp | TACCCAGCTATGAAATTCATTCCCTGGCAGTACCCCACGTCTGGGTaGTGTAGCCCATATGCCAGGAGCACGTTGTACAGGGTCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: YPAMKFIPWQYPTSG*CSPYARSTLYRVFW Trigger: CCAGAAGACCCTGTACAACGTGCTCCTGGCATATGGGCTACACAACCCAGACGTGGGGTACTGCCAGGGAATGAATTTCATAGCTGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000209691.2 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 72 bp | GTCAGAGCAACCCGGAATATGATTTTGGAGCCCTCATaGAACAGACAGTCCCAGATCCGTAGCACCGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VRATRNMILEPS*NRQSQIRSTVS Trigger: GGAGACGGTGCTACGGATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAATCATATTCCGGGTTGCTCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 72 bp | ATGAAATTCATTCCCTGGCAGTACCCCACGTCTGGGTaGTGTAGCCCATATGCCAGGAGCACGTTGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: MKFIPWQYPTSG*CSPYARSTLYR Trigger: CCTGTACAACGTGCTCCTGGCATATGGGCTACACAACCCAGACGTGGGGTACTGCCAGGGAATGAATTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000209691.2 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 90 bp | AGGGTCTTCTGGAGACAAGGATCCGCTGTCTTCCGAAACATCACGTaGTCAGGGAATGTCCGGTTCAAGTCTGTCACGCTTTTCCGGACA | + |
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Preference number: 6 (lower is better) Translates to: RVFWRQGSAVFRNIT*SGNVRFKSVTLFRT Trigger: TGTCCGGAAAAGCGTGACAGACTTGAACCGGACATTCCCTGACAACGTGATGTTTCGGAAGACAGCGGATCCTTGTCTCCAGAAGACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209691.2 |
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| CDS CAA 90 bp | TCACCAGCTCTGCTAGGACCTCTTGGTCAGTCTTCAGCCCCAGCATaGCTGGGCTATAGTAATCAGGTAGTATCCTTCCAACAAGAGCGT | + |
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Preference number: 6 (lower is better) Translates to: SPALLGPLGQSSAPA*LGYSNQVVSFQQER Trigger: ACGCTCTTGTTGGAAGGATACTACCTGATTACTATAGCCCAGCAATGCTGGGGCTGAAGACTGACCAAGAGGTCCTAGCAGAGCTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS GCA 72 bp | TATGAAATTCATTCCTGTCAGAGAACTTCGCAATCCTaGGGAAGACCCAGGTTTCTGTGCGCAGCACTGGCA | + |
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Preference number: 6 (lower is better) Translates to: YEIHSCQRTSQS*GRPRFLCAALA Trigger: TGCCAGTGCTGCGCACAGAAACCTGGGTCTTCCGCAGGATTGCGAAGTTCTCTGACAGGAATGAATTTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165605.4 |
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| CDS CAA 72 bp | CTGCTAGGACCTCTTGGTCAGTCTTCAGCCCCAGCATaGCTGGGCTATAGTAATCAGGTAGTATCCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LLGPLGQSSAPA*LGYSNQVVSFQ Trigger: TTGGAAGGATACTACCTGATTACTATAGCCCAGCAATGCTGGGGCTGAAGACTGACCAAGAGGTCCTAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 90 bp | TTCACTGTCACGCTTTTCCGGACACCACCGTTTCCTTTTAGAAGTTaGGACCATTTGATCGCCCTCTTGGTGAGTATCACCAGGTACGTG | + |
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Preference number: 6 (lower is better) Translates to: FTVTLFRTPPFPFRS*DHLIALLVSITRYV Trigger: CACGTACCTGGTGATACTCACCAAGAGGGCGATCAAATGGTCCAAACTTCTAAAAGGAAACGGTGGTGTCCGGAAAAGCGTGACAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 90 bp | TTAATTAAGGTCAGAGCAACCCGGAATATGATTTTGGAGCCCTCATaGAACAGACAGTCCCAGATCCGTAGCACCGTCTCCACAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LIKVRATRNMILEPS*NRQSQIRSTVSTGR Trigger: CCTACCTGTGGAGACGGTGCTACGGATCTGGGACTGTCTGTTCAATGAGGGCTCCAAAATCATATTCCGGGTTGCTCTGACCTTAATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 90 bp | AAGTCTGTCACGCTTTTCCGGACACCACCGTTTCCTTTTAGAAGTTaGGACCATTTGATCGCCCTCTTGGTGAGTATCACCAGGTACGTG | + |
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Preference number: 6 (lower is better) Translates to: KSVTLFRTPPFPFRS*DHLIALLVSITRYV Trigger: CACGTACCTGGTGATACTCACCAAGAGGGCGATCAAATGGTCCAAACTTCTAAAAGGAAACGGTGGTGTCCGGAAAAGCGTGACAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209691.2 |
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| CDS TCA 72 bp | CCTGGTGATGGTCGTCATGGACAGGCTTCCTGGTTCTaGAAAGATTTTCTGCATGAATGCGTGACACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PGDGRHGQASWF*KDFLHECVTLC Trigger: ACAGAGTGTCACGCATTCATGCAGAAAATCTTTTCAGAACCAGGAAGCCTGTCCATGACGACCATCACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 |
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| CDS CCA 72 bp | ATAAGGATCAGATACCCAGCTATGAAATTCATTCCCTaGCAGTACCCCACGTCTGGGTTGTGTAGCCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: IRIRYPAMKFIP*QYPTSGLCSPY Trigger: ATATGGGCTACACAACCCAGACGTGGGGTACTGCCAGGGAATGAATTTCATAGCTGGGTATCTGATCCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000209691.2 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CCA 72 bp | CCCTTTGGTGATCTGCTTAAACTTGTCACAGATGTCTaGAATACTGCTGGCTTCCAATATAAATTCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PFGDLLKLVTDV*NTAGFQYKFLV Trigger: CACCAGGAATTTATATTGGAAGCCAGCAGTATTCCAGACATCTGTGACAAGTTTAAGCAGATCACCAAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CCA 72 bp | ATGTCTGGAATACTGCTGGCTTCCAATATAAATTCCTaGTGTTGCTTAATTAAGGTCAGAGCAACCCGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: MSGILLASNINS*CCLIKVRATRN Trigger: ATTCCGGGTTGCTCTGACCTTAATTAAGCAACACCAGGAATTTATATTGGAAGCCAGCAGTATTCCAGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS CAA 72 bp | TTTCCTTTTAGAAGTTTGGACCATTTGATCGCCCTCTaGGTGAGTATCACCAGGTACGTGGAAAAGAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPFRSLDHLIAL*VSITRYVEKNS Trigger: AGAATTCTTTTCCACGTACCTGGTGATACTCACCAAGAGGGCGATCAAATGGTCCAAACTTCTAAAAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000209895.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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| CDS GCA 72 bp | GGAATACTGCTGGCTTCCAATATAAATTCCTGGTGTTaGTTAATTAAGGTCAGAGCAACCCGGAATATGATT | + |
|
Preference number: 6 (lower is better) Translates to: GILLASNINSWC*LIKVRATRNMI Trigger: AATCATATTCCGGGTTGCTCTGACCTTAATTAAGCAACACCAGGAATTTATATTGGAAGCCAGCAGTATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165605.4 ENSMUST00000209691.2 ENSMUST00000210317.2 ENSMUST00000211128.2 |
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