Pregenerated sensors for GRSF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044221Ensembl transcript IDs: ENSMUST00000078945.12, ENSMUST00000113234.8, ENSMUST00000133532.8, ENSMUST00000153565.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCAGAGCTCTCAATCACAGGCAACAACAGGCGGGAGCAAGGATCTaGGGAGCGGCACTGGGTGGAAACATCATCTTAGTCTGTAGCAGA | + |
|
Preference number: 1 (lower is better) Translates to: IRALNHRQQQAGARI*GAALGGNIILVCSR Trigger: TCTGCTACAGACTAAGATGATGTTTCCACCCAGTGCCGCTCCTCAGATCCTTGCTCCCGCCTGTTGTTGCCTGTGATTGAGAGCTCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR GCA 90 bp | GTAAACACAGCACTAAGATGCACAGATCCTTTCTCCAGCAGTTGCTaGCAATCAACTGGATCTTTGTATTCCACGTCTCAGAGAGATGTG | + |
|
Preference number: 1 (lower is better) Translates to: VNTALRCTDPFSSSC*QSTGSLYSTSQRDV Trigger: CACATCTCTCTGAGACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCTGTGCATCTTAGTGCTGTGTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR TCA 90 bp | TGCTTTGGTGAGTGTTTGGTAAAAATACACCGTGAATGTGTTCCATaGGTTTGTATCAGAGCTCTCAATCACAGGCAACAACAGGCGGGA | + |
|
Preference number: 1 (lower is better) Translates to: CFGECLVKIHRECVP*VCIRALNHRQQQAG Trigger: TCCCGCCTGTTGTTGCCTGTGATTGAGAGCTCTGATACAAACTCATGGAACACATTCACGGTGTATTTTTACCAAACACTCACCAAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR GCA 90 bp | TGTGTAAACACAGCACTAAGATGCACAGATCCTTTCTCCAGCAGTTaGTGCCAATCAACTGGATCTTTGTATTCCACGTCTCAGAGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: CVNTALRCTDPFSSS*CQSTGSLYSTSQRD Trigger: ATCTCTCTGAGACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCTGTGCATCTTAGTGCTGTGTTTACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR CCA 90 bp | AGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCTTACCAGTCTaGACTGCTTTGATATGTCACATTACGATTTCAAACCTAATAGCC | + |
|
Preference number: 1 (lower is better) Translates to: RAGSIQVKLLMSLPV*TALICHITISNLIA Trigger: GGCTATTAGGTTTGAAATCGTAATGTGACATATCAAAGCAGTCCAGACTGGTAAGGACATTAATAGCTTCACTTGAATTGAACCAGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGAGGAGCGGCACTGGGTaGAAACATCATCTTAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TLTDRHQCQMPSGQGLGRRSGTG*KHHLSL Trigger: CAGACTAAGATGATGTTTCCACCCAGTGCCGCTCCT...CCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR-3UTR TCA 90 bp | AGATTGTTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCGCGGGAGCAAGGATCTaGGGAGCGGCACTGGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RLFSLSRAGSIQVKLLMSAGARI*GAALGG Trigger: TCCACCCAGTGCCGCTCCTCAGATCCTTGCTCCCGC...GGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAACAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGCCATTGCTGCCAATCAACTaGATCTTTGTATTCCACGTC | + |
|
Preference number: 2 (lower is better) Translates to: LTDRHQCQMPSGQGLGRPLLPIN*IFVFHV Trigger: GACGTGGAATACAAAGATCCAGTTGATTGGCAGCAA...TGGCCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGACGTTAACTGCTGAGTaGCCACTTACATTCACTAAC | + |
|
Preference number: 2 (lower is better) Translates to: TLTDRHQCQMPSGQGLGRTLTAE*PLTFTN Trigger: GTTAGTGAATGTAAGTGGCCACTCAGCAGTTAACGT...CCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR CAA 90 bp | GTGTGTAAACACAGCACTAAGATGCACAGATCCTTTCTCCAGCAGTaGCTGCCAATCAACTGGATCTTTGTATTCCACGTCTCAGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VCKHSTKMHRSFLQQ*LPINWIFVFHVSER Trigger: TCTCTCTGAGACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCTGTGCATCTTAGTGCTGTGTTTACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGACTGTTTGCTGCCAATCAACTaGATCTTTGTATTCCACGTC | + |
|
Preference number: 2 (lower is better) Translates to: GRKTKSHRPDFLNLNLDCLLPIN*IFVFHV Trigger: GACGTGGAATACAAAGATCCAGTTGATTGGCAGCAA...ACAGTCCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTATTTAGTATTAAAGCAGAGGTGCTGCCACAATGTGACAGAAATACAGCTCTTCTGTTGCTTTGGTaGGTGTTTGGTAAAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: KLFSIKAEVLPQCDRNTALLLLW*VFGKNT Trigger: TGTATTTTTACCAAACACTCACCAAAGCAACAGAAG...AGCTGTATTTCTGTCACATTGTGGCAGCACCTCTGCTTTAATACTAAATAGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR TCA 72 bp | CTCAATCACAGGCAACAACAGGCGGGAGCAAGGATCTaGGGAGCGGCACTGGGTGGAAACATCATCTTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LNHRQQQAGARI*GAALGGNIILV Trigger: GACTAAGATGATGTTTCCACCCAGTGCCGCTCCTCAGATCCTTGCTCCCGCCTGTTGTTGCCTGTGATTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR GCA 72 bp | GCACTAAGATGCACAGATCCTTTCTCCAGCAGTTGCTaGCAATCAACTGGATCTTTGTATTCCACGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALRCTDPFSSSC*QSTGSLYSTSQ Trigger: CTGAGACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCTGTGCATCTTAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR GCA 72 bp | ACAGCACTAAGATGCACAGATCCTTTCTCCAGCAGTTaGTGCCAATCAACTGGATCTTTGTATTCCACGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TALRCTDPFSSS*CQSTGSLYSTS Trigger: AGACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCTGTGCATCTTAGTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR GCA 72 bp | AACCGAATCTTTCTGTGTGTAAACACAGCACTAAGATaGACAGATCCTTTCTCCAGCAGTTGCTGCCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: NRIFLCVNTALR*TDPFSSSCCQS Trigger: TGATTGGCAGCAACTGCTGGAGAAAGGATCTGTGCATCTTAGTGCTGTGTTTACACACAGAAAGATTCGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR CCA 72 bp | AGGGAGGCCAAGTTTCTAAAGACGTTAACTGCTGAGTaGCCACTTACATTCACTAACCTGTGGTTTGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: REAKFLKTLTAE*PLTFTNLWFAI Trigger: AATAGCAAACCACAGGTTAGTGAATGTAAGTGGCCACTCAGCAGTTAACGTCTTTAGAAACTTGGCCTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATTGTTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCTCCTTTCTCCAGCAGTaGCTGCCAATCAACTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: RLFSLSRAGSIQVKLLMSSFLQQ*LPINWI Trigger: GATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGA...GGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAACAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR CCA 72 bp | TCAATTCAAGTGAAGCTATTAATGTCCTTACCAGTCTaGACTGCTTTGATATGTCACATTACGATTTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SIQVKLLMSLPV*TALICHITISN Trigger: GTTTGAAATCGTAATGTGACATATCAAAGCAGTCCAGACTGGTAAGGACATTAATAGCTTCACTTGAATTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTCTCAATCACAGGCAACAACAGGCGGGAGCAAGGATCTGAGGAGCGGCGCCCGACGGGAAGGTaGCGGCGGCGGAGTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SELSITGNNRREQGSEERRPTGR*RRRSRK Trigger: CTTTCTACTCCGCCGCCGGCACCTTCCCGTCGGGCG...CCGCTCCTCAGATCCTTGCTCCCGCCTGTTGTTGCCTGTGATTGAGAGCTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078945.12 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTCTCAATCACAGGCAACAACAGGCGGGAGCAAGGATCTGAGGAGCGGGAACATCTTCCACAGTaGAGGACCACGGCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SELSITGNNRREQGSEEREHLPQ*RTTAAP Trigger: AGGGGCTGCCGTGGTCCTGCACTGTGGAAGATGTTC...CCGCTCCTCAGATCCTTGCTCCCGCCTGTTGTTGCCTGTGATTGAGAGCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAGCTCTCAATCACAGGCAACAACAGGCGGGAGCAAGGATCTGAGGAGCGGCATGGGACCGATCCTTaGGCATGGCTGCAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SELSITGNNRREQGSEERHGTDP*AWLQQH Trigger: ATGCTGTTGCAGCCATGCTCAAGGATCGGTCCCATG...CCGCTCCTCAGATCCTTGCTCCCGCCTGTTGTTGCCTGTGATTGAGAGCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCTCTCAATCACAGGCAACAACAGGCGGGAGCAAGGATCTGAGGAGCGGGTACTCAGGCAGTGGTaGGAGGTCTTCCAGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SELSITGNNRREQGSEERVLRQW*EVFQVG Trigger: ACCTACCTGGAAGACCTCCCACCACTGCCTGAGTAC...CCGCTCCTCAGATCCTTGCTCCCGCCTGTTGTTGCCTGTGATTGAGAGCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | CTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGCCACATGGGACCGATCCTTaGGCATGGCTGCAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTDRHQCQMPSGQGLGRPHGTDP*AWLQQH Trigger: ATGCTGTTGCAGCCATGCTCAAGGATCGGTCCCATG...TGGCCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | CTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGCCAACTTCCACATACCGCTaGCCCATGTACATCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTDRHQCQMPSGQGLGRPTSTYR*PMYIRC Trigger: GCACCGGATGTACATGGGGCAGCGGTATGTGGAAGT...TGGCCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | ACCAAATCAGACTGGCTTATTAAAGTTCTGAAACCTTCTGTTGCTTTGGTGAGTTCCGCCGGCAGCTGCTaGAGTTGCAGCCGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKSDWLIKVLKPSVALVSSAGSC*SCSRSP Trigger: GGGGCTGCGGCTGCAACTGCAGCAGCTGCCGGCGGA...ACTCACCAAAGCAACAGAAGGTTTCAGAACTTTAATAAGCCAGTCTGATTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078945.12 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCTTACCAAGGGACGGGCAGGGATaGGACCCGCCAGCCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLSRAGSIQVKLLMSLPRDGQG*DPPASR Trigger: CCGGGAGGCTGGCGGGTCCCATCCCTGCCCGTCCCT...TGGTAAGGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078945.12 |
||
| CDS-3UTR CCA 90 bp | ATGTGTTCCATGAGTTTGTATCAGAGCTCTCAATCACAGGCAACAACAGGCGGGCGTCAGCTTCTCCAGTaGCCTTCCCACTGGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MCSMSLYQSSQSQATTGGRQLLQ*PSHWSC Trigger: ACAGCTCCAGTGGGAAGGCCACTGGAGAAGCTGACG...CCCGCCTGTTGTTGCCTGTGATTGAGAGCTCTGATACAAACTCATGGAACACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | ACACTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGGCCCCTGAGCTCGAATaGGATAAACATCATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TLTDRHQCQMPSGQGLGRAPELE*DKHHPP Trigger: AGGTGGATGATGTTTATCTCATTCGAGCTCAGGGGC...CCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | CCTCAGGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGGCACAGGCGAAGGCTTaGCCTGCAGGCTCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: PQDGKLSHTDQTFSISTWAQAKA*PAGSSL Trigger: TAATGAAGAGCCTGCAGGTCAAGCCTTCGCCTGTGC...CCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCTTACCACGGTCCGCCGGCAGCTaGTGCAGTTGCAGCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSRAGSIQVKLLMSLPRSAGS*CSCSRS Trigger: GCTGCGGCTGCAACTGCAGCAGCTGCCGGCGGACCG...TGGTAAGGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078945.12 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGCTCGTACTCAGGCAGTaGTGGGAGGTCTTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PQDGKLSHTDQTFSISTWLVLRQ*WEVFQV Trigger: TACCTGGAAGACCTCCCACCACTGCCTGAGTACGAG...CCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | AGATCCTTTCTCCAGCAGTTGCTGCCAATCAACTGGATCTTTGTATTCCACGTCCGTCAGCTTCTCCAGTaGCCTTCCCACTGGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSFLQQLLPINWIFVFHVRQLLQ*PSHWSC Trigger: ACAGCTCCAGTGGGAAGGCCACTGGAGAAGCTGACG...GACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGCTCATGTGGACAAAATaGAGGGAAGGCAGAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLTDRHQCQMPSGQGLGRLMWTK*REGRVP Trigger: TGGAACTCTGCCTTCCCTGCATTTTGTCCACATGAG...CCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | ACACTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGGCAACAGCATCCTCATaGGTATCAAAGTGCACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLTDRHQCQMPSGQGLGRATASS*VSKCTS Trigger: TGACGTGCACTTTGATACCCATGAGGATGCTGTTGC...CCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTCCATGAGTTTGTATCAGAGCTCTCAATCACAGGCAACAACAGGCGGGGCCCCTGAGCTCGAATaGGATAAACATCATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MCSMSLYQSSQSQATTGGAPELE*DKHHPP Trigger: AGGTGGATGATGTTTATCTCATTCGAGCTCAGGGGC...CCCGCCTGTTGTTGCCTGTGATTGAGAGCTCTGATACAAACTCATGGAACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTCCATGAGTTTGTATCAGAGCTCTCAATCACAGGCAACAACAGGCGGGAGCTGTATTCCATGGTaGTTCTCACAGGCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MCSMSLYQSSQSQATTGGSCIPW*FSQASG Trigger: CCCTGAAGCCTGTGAGAATCACCATGGAATACAGCT...CCCGCCTGTTGTTGCCTGTGATTGAGAGCTCTGATACAAACTCATGGAACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGCCAATTTCTTCCCTGTaGTTTAGAAGCGCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLTDRHQCQMPSGQGLGRPISSL*FRSAWL Trigger: CAACCAAGCGCTTCTAAAGCACAGGGAAGAAATTGG...CCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGATCCTTGAGCATGGCTaGAACAGCATCCTCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQDGKLSHTDQTFSISTWILEHG*NSILMG Trigger: ACCCATGAGGATGCTGTTGCAGCCATGCTCAAGGAT...CCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCCTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGCCCATGTACATCCGGTaGTTTTCTAAGGCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQDGKLSHTDQTFSISTWPMYIR*FSKAFC Trigger: ACAGAAGGCCTTAGAAAAGCACCGGATGTACATGGG...CCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | CCAATCAACTGGATCTTTGTATTCCACGTCTCAGAGAGATGTGCAAATGAGATGCTCGTACTCAGGCAGTaGTGGGAGGTCTTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PINWIFVFHVSERCANEMLVLRQ*WEVFQV Trigger: TACCTGGAAGACCTCCCACCACTGCCTGAGTACGAG...CATCTCATTTGCACATCTCTCTGAGACGTGGAATACAAAGATCCAGTTGATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGTGCTTTAGAAGCGCTTaGTTGGCCATTTCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQDGKLSHTDQTFSISTWCFRSA*LAISGS Trigger: AGAACCAGAAATGGCCAACCAAGCGCTTCTAAAGCA...CCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCCTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| 3UTR CAA 72 bp | CACAGCACTAAGATGCACAGATCCTTTCTCCAGCAGTaGCTGCCAATCAACTGGATCTTTGTATTCCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSTKMHRSFLQQ*LPINWIFVFHV Trigger: GACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCTGTGCATCTTAGTGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | CCTCAGGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGCTCTGGAAGTTTTTCTaGCATCTCCTTAGGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: PQDGKLSHTDQTFSISTWLWKFF*HLLRQF Trigger: GAATTGCCTAAGGAGATGTCAGAAAAACTTCCAGAG...CCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCCTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | AACTGGATCTTTGTATTCCACGTCTCAGAGAGATGTGCAAATGAGATGCTTCCTAGCTGTATTCCATGGTaGTTCTCACAGGCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NWIFVFHVSERCANEMLPSCIPW*FSQASG Trigger: CCCTGAAGCCTGTGAGAATCACCATGGAATACAGCT...AGGAAGCATCTCATTTGCACATCTCTCTGAGACGTGGAATACAAAGATCCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCTTACCAGAACATCTTCCACAGTaGAGGACCACGGCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLSRAGSIQVKLLMSLPEHLPQ*RTTAAP Trigger: AGGGGCTGCCGTGGTCCTGCACTGTGGAAGATGTTC...TGGTAAGGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACTGGCTTATTAAAGTTCTGAAACCTTCTGTTGCTTTGGTGAGTGTTTGGGGCGAAGGCTTGACCTaGAGGCTCTTCATTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDWLIKVLKPSVALVSVWGEGLT*RLFIKA Trigger: TGCCTTAATGAAGAGCCTGCAGGTCAAGCCTTCGCC...CCAAACACTCACCAAAGCAACAGAAGGTTTCAGAACTTTAATAAGCCAGTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | TCAGACTGGCTTATTAAAGTTCTGAAACCTTCTGTTGCTTTGGTGAGTGTTTGGCCTCGTCTCCTAGCTTaGATGGGCTCAACTCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SDWLIKVLKPSVALVSVWPRLLA*MGSTRT Trigger: AGTACGAGTTGAGCCCATCCAAGCTAGGAGACGAGG...CCAAACACTCACCAAAGCAACAGAAGGTTTCAGAACTTTAATAAGCCAGTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGTTAGAAGCGCTTGGTTaGCCATTTCTGGTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQDGKLSHTDQTFSISTWLEALG*PFLVLQ Trigger: TTGAAGAACCAGAAATGGCCAACCAAGCGCTTCTAA...CCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCCTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCTTTCTCCAGCAGTTGCTGCCAATCAACTGGATCTTTGTATTCCACGTCCTCTGGAAGTTTTTCTaGCATCTCCTTAGGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RSFLQQLLPINWIFVFHVLWKFF*HLLRQF Trigger: GAATTGCCTAAGGAGATGTCAGAAAAACTTCCAGAG...GACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCTTACCAACTTCCACATACCGCTaGCCCATGTACATCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSRAGSIQVKLLMSLPTSTYR*PMYIRC Trigger: GCACCGGATGTACATGGGGCAGCGGTATGTGGAAGT...TGGTAAGGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGTTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCGTACTCAGGCAGTGGTaGGAGGTCTTCCAGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLFSLSRAGSIQVKLLMSVLRQW*EVFQVG Trigger: ACCTACCTGGAAGACCTCCCACCACTGCCTGAGTAC...GGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCTTTCTCCAGCAGTTGCTGCCAATCAACTGGATCTTTGTATTCCACGTCTCGGATTCTGCAGTCTaGGAAAAAGTTAAGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: RSFLQQLLPINWIFVFHVSDSAV*EKVKNI Trigger: GATGTTCTTAACTTTTTCTCAGACTGCAGAATCCGA...GACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCTTACCAGGCGAAGGCTTGACCTaGAGGCTCTTCATTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSRAGSIQVKLLMSLPGEGLT*RLFIKA Trigger: TGCCTTAATGAAGAGCCTGCAGGTCAAGCCTTCGCC...TGGTAAGGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | GGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGACTGTTACTATGTTCAGTCCTaGAAAGAAGTCCACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRKTKSHRPDFLNLNLDCYYVQS*KEVHNV Trigger: GACATTGTGGACTTCTTTGCAGGACTGAACATAGTA...ACAGTCCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGTTGGTTGGCCATTTCTaGTTCTTCAAACTGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: PQDGKLSHTDQTFSISTWLVGHF*FFKLYI Trigger: TATGTACAGTTTGAAGAACCAGAAATGGCCAACCAA...CCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCCTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | TCAGACTGGCTTATTAAAGTTCTGAAACCTTCTGTTGCTTTGGTGAGTGTTTGGGCAACAGCATCCTCATaGGTATCAAAGTGCACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SDWLIKVLKPSVALVSVWATASS*VSKCTS Trigger: TGACGTGCACTTTGATACCCATGAGGATGCTGTTGC...CCAAACACTCACCAAAGCAACAGAAGGTTTCAGAACTTTAATAAGCCAGTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTATTTAGTATTAAAGCAGAGGTGCTGCCACAATGTGACAGAAATACAGCTCTCATGTGGACAAAATaGAGGGAAGGCAGAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLFSIKAEVLPQCDRNTALMWTK*REGRVP Trigger: TGGAACTCTGCCTTCCCTGCATTTTGTCCACATGAG...AGCTGTATTTCTGTCACATTGTGGCAGCACCTCTGCTTTAATACTAAATAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCATAATCCCAAACCGAATCTTTCTGTGTGTAAACACAGCACTAAGATGCCTCGTCTCCTAGCTTaGATGGGCTCAACTCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LFHNPKPNLSVCKHSTKMPRLLA*MGSTRT Trigger: AGTACGAGTTGAGCCCATCCAAGCTAGGAGACGAGG...CATCTTAGTGCTGTGTTTACACACAGAAAGATTCGGTTTGGGATTATGAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTATTTAGTATTAAAGCAGAGGTGCTGCCACAATGTGACAGAAATACAGCTCCAATTTCTTCCCTGTaGTTTAGAAGCGCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLFSIKAEVLPQCDRNTAPISSL*FRSAWL Trigger: CAACCAAGCGCTTCTAAAGCACAGGGAAGAAATTGG...AGCTGTATTTCTGTCACATTGTGGCAGCACCTCTGCTTTAATACTAAATAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGTAGCTTATTTCATAATCCCAAACCGAATCTTTCTGTGTGTAAACACAGCATCCTTGAGCATGGCTaGAACAGCATCCTCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ICSLFHNPKPNLSVCKHSILEHG*NSILMG Trigger: ACCCATGAGGATGCTGTTGCAGCCATGCTCAAGGAT...GCTGTGTTTACACACAGAAAGATTCGGTTTGGGATTATGAAATAAGCTACAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | TCAGACTGGCTTATTAAAGTTCTGAAACCTTCTGTTGCTTTGGTGAGTGTTTGGTTAGAAGCGCTTGGTTaGCCATTTCTGGTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDWLIKVLKPSVALVSVWLEALG*PFLVLQ Trigger: TTGAAGAACCAGAAATGGCCAACCAAGCGCTTCTAA...CCAAACACTCACCAAAGCAACAGAAGGTTTCAGAACTTTAATAAGCCAGTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTCATAATCCCAAACCGAATCTTTCTGTGTGTAAACACAGCACTAAGATGCCCATGTACATCCGGTaGTTTTCTAAGGCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFHNPKPNLSVCKHSTKMPMYIR*FSKAFC Trigger: ACAGAAGGCCTTAGAAAAGCACCGGATGTACATGGG...CATCTTAGTGCTGTGTTTACACACAGAAAGATTCGGTTTGGGATTATGAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGTTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCTGCTTTAGAAGCGCTTaGTTGGCCATTTCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFSLSRAGSIQVKLLMSCFRSA*LAISGS Trigger: AGAACCAGAAATGGCCAACCAAGCGCTTCTAAAGCA...GGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAACAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR GCA 90 bp | ACCAAATCAGACTGGCTTATTAAAGTTCTGAAACCTTCTGTTGCTTTGGTGAGTTACTATGTTCAGTCCTaGAAAGAAGTCCACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKSDWLIKVLKPSVALVSYYVQS*KEVHNV Trigger: GACATTGTGGACTTCTTTGCAGGACTGAACATAGTA...ACTCACCAAAGCAACAGAAGGTTTCAGAACTTTAATAAGCCAGTCTGATTTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGTTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCTCGGATTCTGCAGTCTaGGAAAAAGTTAAGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: RLFSLSRAGSIQVKLLMSSDSAV*EKVKNI Trigger: GATGTTCTTAACTTTTTCTCAGACTGCAGAATCCGA...GGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAACAATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGTAGCTTATTTCATAATCCCAAACCGAATCTTTCTGTGTGTAAACACAGCTTGGTTGGCCATTTCTaGTTCTTCAAACTGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: ICSLFHNPKPNLSVCKHSLVGHF*FFKLYI Trigger: TATGTACAGTTTGAAGAACCAGAAATGGCCAACCAA...GCTGTGTTTACACACAGAAAGATTCGGTTTGGGATTATGAAATAAGCTACAAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS GCA 90 bp | GGAGTAGCAGCAGGCGGCGGCGGCCAGAGACGCCCGACGGGAAGGTaGCGGCGGCGGAGTAGAAAGGCAGGCAGGCGGCGCCGGTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVAAGGGGQRRPTGR*RRRSRKAGRRRRSA Trigger: GGCGGACCGGCGCCGCCTGCCTGCCTTTCTACTCCGCCGCCGGCACCTTCCCGTCGGGCGTCTCTGGCCGCCGCCGCCTGCTGCTACTCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078945.12 |
||
| CDS GCA 90 bp | CGGAGTAGAAAGGCAGGCAGGCGGCGCCGGTCCGCCGGCAGCTGCTaGAGTTGCAGCCGCAGCCCCGGAGCAACGCGCCTAGCACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSRKAGRRRRSAGSC*SCSRSPGATRLAPS Trigger: GCTGGGTGCTAGGCGCGTTGCTCCGGGGCTGCGGCTGCAACTGCAGCAGCTGCCGGCGGACCGGCGCCGCCTGCCTGCCTTTCTACTCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078945.12 |
||
| CDS CCA 90 bp | TGGACATGGGACCGATCCTTGAGCATGGCTGCAACAGCATCCTCATaGGTATCAAAGTGCACGTCAGCTTCTCCAGTGGCCTTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WTWDRSLSMAATASS*VSKCTSASPVAFPL Trigger: CAGTGGGAAGGCCACTGGAGAAGCTGACGTGCACTTTGATACCCATGAGGATGCTGTTGCAGCCATGCTCAAGGATCGGTCCCATGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS TCA 90 bp | GAACATCTTCCACAGTGCAGGACCACGGCAGCCCCTGAGCTCGAATaGGATAAACATCATCCACCTCGTCTCCTAGCTTGGATGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EHLPQCRTTAAPELE*DKHHPPRLLAWMGS Trigger: TGAGCCCATCCAAGCTAGGAGACGAGGTGGATGATGTTTATCTCATTCGAGCTCAGGGGCTGCCGTGGTCCTGCACTGTGGAAGATGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | CTGACAGACAGGCACCAATGTCAAATGCCTTCAGGTCAAGGCTTAGGGAGGCCAAGCACAGGCGAAGGCTaGACCTGCAGGCTCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LTDRHQCQMPSGQGLGRPSTGEG*TCRLFI Trigger: AATGAAGAGCCTGCAGGTCAAGCCTTCGCCTGTGCT...TGGCCTCCCTAAGCCTTGACCTGAAGGCATTTGACATTGGTGCCTGTCTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS GCA 90 bp | CTCAGGCGGACCACACCATCACTGAGCACAGGCGAAGGCTTGACCTaGAGGCTCTTCATTAAGGCATCCACATCTTCGTTGTTTATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRRTTPSLSTGEGLT*RLFIKASTSSLFIS Trigger: TGAAATAAACAACGAAGATGTGGATGCCTTAATGAAGAGCCTGCAGGTCAAGCCTTCGCCTGTGCTCAGTGATGGTGTGGTCCGCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000133532.8 ENSMUST00000153565.8 |
||
| CDS GCA 90 bp | CTCAATATACCTATGTTGGACATGGGACCGATCCTTGAGCATGGCTaGAACAGCATCCTCATGGGTATCAAAGTGCACGTCAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNIPMLDMGPILEHG*NSILMGIKVHVSFS Trigger: GGAGAAGCTGACGTGCACTTTGATACCCATGAGGATGCTGTTGCAGCCATGCTCAAGGATCGGTCCCATGTCCAACATAGGTATATTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | GGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGACTGTAGCACAGGCGAAGGCTaGACCTGCAGGCTCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GRKTKSHRPDFLNLNLDCSTGEG*TCRLFI Trigger: AATGAAGAGCCTGCAGGTCAAGCCTTCGCCTGTGCT...ACAGTCCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS GCA 90 bp | TTTATTTCATACACTTCCACATACCGCTGCCCCATGTACATCCGGTaGTTTTCTAAGGCCTTCTGTACATCCTGCTCGGACTCCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FISYTSTYRCPMYIR*FSKAFCTSCSDSIS Trigger: AGAGATGGAGTCCGAGCAGGATGTACAGAAGGCCTTAGAAAAGCACCGGATGTACATGGGGCAGCGGTATGTGGAAGTGTATGAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS GCA 90 bp | TCTTGGGCATTGGCTTGGAAAGGCAATCCTCTCATGTGGACAAAATaGAGGGAAGGCAGAGTTCCAAAATCGACAGCCTCTGGAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SWALAWKGNPLMWTK*REGRVPKSTASGSF Trigger: AAAACTTCCAGAGGCTGTCGATTTTGGAACTCTGCCTTCCCTGCATTTTGTCCACATGAGAGGATTGCCTTTCCAAGCCAATGCCCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | AACTGGATCTTTGTATTCCACGTCTCAGAGAGATGTGCAAATGAGATGCTTCCTACATGGGACCGATCCTaGAGCATGGCTGCAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NWIFVFHVSERCANEMLPTWDRS*SMAATA Trigger: TGCTGTTGCAGCCATGCTCAAGGATCGGTCCCATGT...AGGAAGCATCTCATTTGCACATCTCTCTGAGACGTGGAATACAAAGATCCAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAGGACGGAAAACTAAGTCACACAGACCAGACTTTCTCAATCTCAACCTGGCTCAATATACCTATGTaGGACATGGGACCGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PQDGKLSHTDQTFSISTWLNIPM*DMGPIL Trigger: AAGGATCGGTCCCATGTCCAACATAGGTATATTGAG...CCAGGTTGAGATTGAGAAAGTCTGGTCTGTGTGACTTAGTTTTCCGTCCTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS CCA 90 bp | TGTATCGGTTACCAATTTCTTCCCTGTGCTTTAGAAGCGCTTGGTTaGCCATTTCTGGTTCTTCAAACTGTACATAGGCTTCCCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CIGYQFLPCALEALG*PFLVLQTVHRLPPF Trigger: AAACGGGGGAAGCCTATGTACAGTTTGAAGAACCAGAAATGGCCAACCAAGCGCTTCTAAAGCACAGGGAAGAAATTGGTAACCGATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000153565.8 |
||
| CDS-3UTR CAA 90 bp | AACTGGATCTTTGTATTCCACGTCTCAGAGAGATGTGCAAATGAGATGCTTCCTGTCTTGGGCATTGGCTaGGAAAGGCAATCCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NWIFVFHVSERCANEMLPVLGIG*ERQSSH Trigger: ATGAGAGGATTGCCTTTCCAAGCCAATGCCCAAGAC...AGGAAGCATCTCATTTGCACATCTCTCTGAGACGTGGAATACAAAGATCCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGTTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCACATGGGACCGATCCTaGAGCATGGCTGCAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLFSLSRAGSIQVKLLMSTWDRS*SMAATA Trigger: TGCTGTTGCAGCCATGCTCAAGGATCGGTCCCATGT...GGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTATTTAGTATTAAAGCAGAGGTGCTGCCACAATGTGACAGAAATACAGCTGTCTTGGGCATTGGCTaGGAAAGGCAATCCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KLFSIKAEVLPQCDRNTAVLGIG*ERQSSH Trigger: ATGAGAGGATTGCCTTTCCAAGCCAATGCCCAAGAC...AGCTGTATTTCTGTCACATTGTGGCAGCACCTCTGCTTTAATACTAAATAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | AACTGGATCTTTGTATTCCACGTCTCAGAGAGATGTGCAAATGAGATGCTTCCTATAATGTCTTGGGCATaGGCTTGGAAAGGCAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: NWIFVFHVSERCANEMLPIMSWA*AWKGNP Trigger: AGGATTGCCTTTCCAAGCCAATGCCCAAGACATTAT...AGGAAGCATCTCATTTGCACATCTCTCTGAGACGTGGAATACAAAGATCCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | AGATCCTTTCTCCAGCAGTTGCTGCCAATCAACTGGATCTTTGTATTCCACGTCGAAATTTATAATGTCTaGGGCATTGGCTTGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSFLQQLLPINWIFVFHVEIYNV*GIGLER Trigger: CCTTTCCAAGCCAATGCCCAAGACATTATAAATTTC...GACGTGGAATACAAAGATCCAGTTGATTGGCAGCAACTGCTGGAGAAAGGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS GCA 90 bp | CTGCTTGGAAATATCTCTATGTATCGGTTACCAATTTCTTCCCTGTaGTTTAGAAGCGCTTGGTTGGCCATTTCTGGTTCTTCAAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGNISMYRLPISSL*FRSAWLAISGSSNC Trigger: ACAGTTTGAAGAACCAGAAATGGCCAACCAAGCGCTTCTAAAGCACAGGGAAGAAATTGGTAACCGATACATAGAGATATTTCCAAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000153565.8 |
||
| CDS GCA 90 bp | CCCTCTATAGTCCATCACAAAAGTAATGTCTACTATGTTCAGTCCTaGAAAGAAGTCCACAATGTCCTTTTCATTGCAGCTGTAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSIVHHKSNVYYVQS*KEVHNVLFIAAVRK Trigger: CTTCCTTACAGCTGCAATGAAAAGGACATTGTGGACTTCTTTGCAGGACTGAACATAGTAGACATTACTTTTGTGATGGACTATAGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000153565.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTATTTAGTATTAAAGCAGAGGTGCTGCCACAATGTGACAGAAATACAGCTATAATGTCTTGGGCATaGGCTTGGAAAGGCAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLFSIKAEVLPQCDRNTAIMSWA*AWKGNP Trigger: AGGATTGCCTTTCCAAGCCAATGCCCAAGACATTAT...AGCTGTATTTCTGTCACATTGTGGCAGCACCTCTGCTTTAATACTAAATAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACTGGCTTATTAAAGTTCTGAAACCTTCTGTTGCTTTGGTGAGTGTTTGGGCATCCACATCTTCGTaGTTTATTTCATACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDWLIKVLKPSVALVSVWASTSS*FISYTS Trigger: GGAAGTGTATGAAATAAACAACGAAGATGTGGATGC...CCAAACACTCACCAAAGCAACAGAAGGTTTCAGAACTTTAATAAGCCAGTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACTGGCTTATTAAAGTTCTGAAACCTTCTGTTGCTTTGGTGAGTGTTTGGGAAATTTATAATGTCTaGGGCATTGGCTTGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SDWLIKVLKPSVALVSVWEIYNV*GIGLER Trigger: CCTTTCCAAGCCAATGCCCAAGACATTATAAATTTC...CCAAACACTCACCAAAGCAACAGAAGGTTTCAGAACTTTAATAAGCCAGTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS CCA 90 bp | TCCTTTATGAGATCCAACATGTGTTCGAACTTCATTCCTTCTGCTTaGAAATATCTCTATGTATCGGTTACCAATTTCTTCCCTGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFMRSNMCSNFIPSA*KYLYVSVTNFFPVL Trigger: AAGCACAGGGAAGAAATTGGTAACCGATACATAGAGATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTTGGATCTCATAAAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGTAGCTTATTTCATAATCCCAAACCGAATCTTTCTGTGTGTAAACACAGCTTTAGAAGCGCTTGGTaGGCCATTTCTGGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ICSLFHNPKPNLSVCKHSFRSAW*AISGSS Trigger: TGAAGAACCAGAAATGGCCAACCAAGCGCTTCTAAA...GCTGTGTTTACACACAGAAAGATTCGGTTTGGGATTATGAAATAAGCTACAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGTAGCTTATTTCATAATCCCAAACCGAATCTTTCTGTGTGTAAACACAGCCTCAATATACCTATGTaGGACATGGGACCGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ICSLFHNPKPNLSVCKHSLNIPM*DMGPIL Trigger: AAGGATCGGTCCCATGTCCAACATAGGTATATTGAG...GCTGTGTTTACACACAGAAAGATTCGGTTTGGGATTATGAAATAAGCTACAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS GCA 90 bp | TCTTTCCTTTATGAGATCCAACATGTGTTCGAACTTCATTCCTTCTaGTTGGAAATATCTCTATGTATCGGTTACCAATTTCTTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SFLYEIQHVFELHSF*LEISLCIGYQFLPC Trigger: ACAGGGAAGAAATTGGTAACCGATACATAGAGATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTTGGATCTCATAAAGGAAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGTTTTCCCTATCTAGAGCTGGTTCAATTCAAGTGAAGCTATTAATGTCCGCATCCACATCTTCGTaGTTTATTTCATACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLFSLSRAGSIQVKLLMSASTSS*FISYTS Trigger: GGAAGTGTATGAAATAAACAACGAAGATGTGGATGC...GGACATTAATAGCTTCACTTGAATTGAACCAGCTCTAGATAGGGAAAACAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS TCA 90 bp | GTTATATATTTAGTAGGAGGAGACGATGTCATTTTCTTTCCTTTATaGGATCCAACATGTGTTCGAACTTCATTCCTTCTGCTTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VIYLVGGDDVIFFPL*DPTCVRTSFLLLGN Trigger: ATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTTGGATCTCATAAAGGAAAGAAAATGACATCGTCTCCTCCTACTAAATATATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS GCA 72 bp | GCAGGCGGCGGCGGCCAGAGACGCCCGACGGGAAGGTaGCGGCGGCGGAGTAGAAAGGCAGGCAGGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AGGGGQRRPTGR*RRRSRKAGRRR Trigger: GCGCCGCCTGCCTGCCTTTCTACTCCGCCGCCGGCACCTTCCCGTCGGGCGTCTCTGGCCGCCGCCGCCTGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078945.12 |
||
| CDS GCA 72 bp | TTCCTGACTGTAACCCCGCGCCGGGCCCGCGGCGGCTaGCAGCGATCGCGGAAACAGCGGGGCGCGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FLTVTPRRARGG*QRSRKQRGAQG Trigger: GCCCTGCGCGCCCCGCTGTTTCCGCGATCGCTGGCAGCCGCCGCGGGCCCGGCGCGGGGTTACAGTCAGGAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078945.12 |
||
| CDS GCA 72 bp | AAGGCAGGCAGGCGGCGCCGGTCCGCCGGCAGCTGCTaGAGTTGCAGCCGCAGCCCCGGAGCAACGCGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: KAGRRRRSAGSC*SCSRSPGATRL Trigger: TAGGCGCGTTGCTCCGGGGCTGCGGCTGCAACTGCAGCAGCTGCCGGCGGACCGGCGCCGCCTGCCTGCCTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078945.12 |
||
| CDS TCA 72 bp | CCACAGTGCAGGACCACGGCAGCCCCTGAGCTCGAATaGGATAAACATCATCCACCTCGTCTCCTAGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PQCRTTAAPELE*DKHHPPRLLAW Trigger: CCAAGCTAGGAGACGAGGTGGATGATGTTTATCTCATTCGAGCTCAGGGGCTGCCGTGGTCCTGCACTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS CCA 72 bp | GACCGATCCTTGAGCATGGCTGCAACAGCATCCTCATaGGTATCAAAGTGCACGTCAGCTTCTCCAGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DRSLSMAATASS*VSKCTSASPVA Trigger: GGCCACTGGAGAAGCTGACGTGCACTTTGATACCCATGAGGATGCTGTTGCAGCCATGCTCAAGGATCGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS CAA 72 bp | AGGCGGACCACACCATCACTGAGCACAGGCGAAGGCTaGACCTGCAGGCTCTTCATTAAGGCATCCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: RRTTPSLSTGEG*TCRLFIKASTS Trigger: AGATGTGGATGCCTTAATGAAGAGCCTGCAGGTCAAGCCTTCGCCTGTGCTCAGTGATGGTGTGGTCCGCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000133532.8 ENSMUST00000153565.8 |
||
| CDS CAA 90 bp | AGTCCTCTCAGGCGGACCACACCATCACTGAGCACAGGCGAAGGCTaGACCTGCAGGCTCTTCATTAAGGCATCCACATCTTCGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPLRRTTPSLSTGEG*TCRLFIKASTSSLF Trigger: AAACAACGAAGATGTGGATGCCTTAATGAAGAGCCTGCAGGTCAAGCCTTCGCCTGTGCTCAGTGATGGTGTGGTCCGCCTGAGAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000153565.8 |
||
| CDS GCA 72 bp | TACACTTCCACATACCGCTGCCCCATGTACATCCGGTaGTTTTCTAAGGCCTTCTGTACATCCTGCTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: YTSTYRCPMYIR*FSKAFCTSCSD Trigger: GTCCGAGCAGGATGTACAGAAGGCCTTAGAAAAGCACCGGATGTACATGGGGCAGCGGTATGTGGAAGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000133532.8 ENSMUST00000153565.8 |
||
| CDS GCA 72 bp | CCTATGTTGGACATGGGACCGATCCTTGAGCATGGCTaGAACAGCATCCTCATGGGTATCAAAGTGCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: PMLDMGPILEHG*NSILMGIKVHV Trigger: GACGTGCACTTTGATACCCATGAGGATGCTGTTGCAGCCATGCTCAAGGATCGGTCCCATGTCCAACATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS GCA 72 bp | TACATCCGGTGCTTTTCTAAGGCCTTCTGTACATCCTaGTCGGACTCCATCTCTATTAAGGCATCGCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YIRCFSKAFCTS*SDSISIKASPL Trigger: GAGGGGCGATGCCTTAATAGAGATGGAGTCCGAGCAGGATGTACAGAAGGCCTTAGAAAAGCACCGGATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS GCA 72 bp | TTGGCTTGGAAAGGCAATCCTCTCATGTGGACAAAATaGAGGGAAGGCAGAGTTCCAAAATCGACAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LAWKGNPLMWTK*REGRVPKSTAS Trigger: AGAGGCTGTCGATTTTGGAACTCTGCCTTCCCTGCATTTTGTCCACATGAGAGGATTGCCTTTCCAAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS CAA 90 bp | AGGCTTCAGGGGAGCAAAGAAATTTATAATGTCTTGGGCATTGGCTaGGAAAGGCAATCCTCTCATGTGGACAAAATGCAGGGAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLQGSKEIYNVLGIG*ERQSSHVDKMQGRQ Trigger: CTGCCTTCCCTGCATTTTGTCCACATGAGAGGATTGCCTTTCCAAGCCAATGCCCAAGACATTATAAATTTCTTTGCTCCCCTGAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS CAA 72 bp | ACCTGCAGGCTCTTCATTAAGGCATCCACATCTTCGTaGTTTATTTCATACACTTCCACATACCGCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TCRLFIKASTSS*FISYTSTYRCP Trigger: GGGGCAGCGGTATGTGGAAGTGTATGAAATAAACAACGAAGATGTGGATGCCTTAATGAAGAGCCTGCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000133532.8 ENSMUST00000153565.8 |
||
| CDS CAA 90 bp | CTCACAGGCTTCAGGGGAGCAAAGAAATTTATAATGTCTTGGGCATaGGCTTGGAAAGGCAATCCTCTCATGTGGACAAAATGCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LTGFRGAKKFIMSWA*AWKGNPLMWTKCRE Trigger: TTCCCTGCATTTTGTCCACATGAGAGGATTGCCTTTCCAAGCCAATGCCCAAGACATTATAAATTTCTTTGCTCCCCTGAAGCCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS CCA 72 bp | TACCAATTTCTTCCCTGTGCTTTAGAAGCGCTTGGTTaGCCATTTCTGGTTCTTCAAACTGTACATAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: YQFLPCALEALG*PFLVLQTVHRL Trigger: AAGCCTATGTACAGTTTGAAGAACCAGAAATGGCCAACCAAGCGCTTCTAAAGCACAGGGAAGAAATTGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000153565.8 |
||
| CDS GCA 72 bp | AATATCTCTATGTATCGGTTACCAATTTCTTCCCTGTaGTTTAGAAGCGCTTGGTTGGCCATTTCTGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NISMYRLPISSL*FRSAWLAISGS Trigger: AGAACCAGAAATGGCCAACCAAGCGCTTCTAAAGCACAGGGAAGAAATTGGTAACCGATACATAGAGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 ENSMUST00000153565.8 |
||
| CDS CAA 72 bp | TTCAGGGGAGCAAAGAAATTTATAATGTCTTGGGCATaGGCTTGGAAAGGCAATCCTCTCATGTGGACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FRGAKKFIMSWA*AWKGNPLMWTK Trigger: TTTTGTCCACATGAGAGGATTGCCTTTCCAAGCCAATGCCCAAGACATTATAAATTTCTTTGCTCCCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS TCA 72 bp | CAGAGTTCCAAAATCGACAGCCTCTGGAAGTTTTTCTaGCATCTCCTTAGGCAATTCTATCTCTTTATCACT | + |
|
Preference number: 6 (lower is better) Translates to: QSSKIDSLWKFF*HLLRQFYLFIT Trigger: AGTGATAAAGAGATAGAATTGCCTAAGGAGATGTCAGAAAAACTTCCAGAGGCTGTCGATTTTGGAACTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||
| CDS TCA 72 bp | TTAGTAGGAGGAGACGATGTCATTTTCTTTCCTTTATaGGATCCAACATGTGTTCGAACTTCATTCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVGGDDVIFFPL*DPTCVRTSFLL Trigger: CAGAAGGAATGAAGTTCGAACACATGTTGGATCTCATAAAGGAAAGAAAATGACATCGTCTCCTCCTACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078945.12 ENSMUST00000113234.8 |
||