Pregenerated sensors for GRPEL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024580Ensembl transcript IDs: ENSMUST00000062991.9, ENSMUST00000238010.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCCCGTAAGGAAGGAATGGACCCGAGTGCCACGTGAAGCAGTGTaGCATCATCCAGTGTTGAGTAGGAGGGGGCAGGAGAGAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GPVRKEWTRVPREAV*HHPVLSRRGQERER Trigger: CCTCTCTCTCTCCTGCCCCCTCCTACTCAACACTGGATGATGCCACACTGCTTCACGTGGCACTCGGGTCCATTCCTTCCTTACGGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR TCA 90 bp | AGCGCTTGGTGCTGCTCCCCGAACCCTAAGCCAGTCATGAATAGATaGCCCAGATCATCAACACCCAGCCATGCACATAGCCACCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SAWCCSPNPKPVMNR*PRSSTPSHAHSHQG Trigger: GCCTTGGTGGCTATGTGCATGGCTGGGTGTTGATGATCTGGGTCATCTATTCATGACTGGCTTAGGGTTCGGGGAGCAGCACCAAGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR GCA 90 bp | GGGAACCTGACTGGAGCTAGTTCAACAGCAGTGGTATTAGCCCCGTaGCTGCTGACTTACAGGCATGCACATGGGCCCGTAAGGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: GNLTGASSTAVVLAP*LLTYRHAHGPVRKE Trigger: TTCCTTCCTTACGGGCCCATGTGCATGCCTGTAAGTCAGCAGGCACGGGGCTAATACCACTGCTGTTGAACTAGCTCCAGTCAGGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR CCA 90 bp | TCTAGCAGGGACAGCCCTTGGAAGACTTTTTCCAGAGTGCGCCTGTaGTCCTCAGGTTCTGCCCCTTCTGAACAGCACTTGGCAGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SSRDSPWKTFSRVRL*SSGSAPSEQHLAVF Trigger: GAAGACTGCCAAGTGCTGTTCAGAAGGGGCAGAACCTGAGGACCACAGGCGCACTCTGGAAAAAGTCTTCCAAGGGCTGTCCCTGCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR TCA 90 bp | AGTCTTCTATTGGACAAAGACATTTCAGCCAAACCGGGTGCTCTGTaGGCCTGTCTCCTCCCCGCCAGCACTGGGGTTAGTTACACGCCT | + |
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Preference number: 1 (lower is better) Translates to: SLLLDKDISAKPGAL*ACLLPASTGVSYTP Trigger: AGGCGTGTAACTAACCCCAGTGCTGGCGGGGAGGAGACAGGCTCACAGAGCACCCGGTTTGGCTGAAATGTCTTTGTCCAATAGAAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR GCA 90 bp | CTAAGTGTGATGTCAATGTCAGCAAAGACTTCAGTGCCAACCCAGTaGTGTCTGTCTGGTGGTGACCCCATGAACTCAGGCACTGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: LSVMSMSAKTSVPTQ*CLSGGDPMNSGTGS Trigger: GGAACCAGTGCCTGAGTTCATGGGGTCACCACCAGACAGACAGCACTGGGTTGGCACTGAAGTCTTTGCTGACATTGACATCACACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR TCA 90 bp | CTGGTTCCTACAAGATGCAGATCACTCCTCTGGCTTCCAGGACCATaGAAATCAACATCCTTGCTCCCCCAGTACAAGTGTGGATGGACA | + |
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Preference number: 1 (lower is better) Translates to: LVPTRCRSLLWLPGP*KSTSLLPQYKCGWT Trigger: TGTCCATCCACACTTGTACTGGGGGAGCAAGGATGTTGATTTTCATGGTCCTGGAAGCCAGAGGAGTGATCTGCATCTTGTAGGAACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR TCA 90 bp | AAGCTTGCCAGGGCTGGGAGCTGTAGAGAGCTTACCTGGCATTCATaGGACCTTGCATCCAATCCCCAATGCTCTAAAAACCCAAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: KLARAGSCRELTWHS*DLASNPQCSKNPSF Trigger: AAAACTTGGGTTTTTAGAGCATTGGGGATTGGATGCAAGGTCTCATGAATGCCAGGTAAGCTCTCTACAGCTCCCAGCCCTGGCAAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR GCA 90 bp | CAGAAGCCCAAGTTCTTCTTGCTACACCAAGGCCCAGTCTCTGACTaGATTGTCACCATTGCATTGGGATTATTTTGTGTGTGCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: QKPKFFLLHQGPVSD*IVTIALGLFCVCCV Trigger: CACACAGCACACACAAAATAATCCCAATGCAATGGTGACAATGCAGTCAGAGACTGGGCCTTGGTGTAGCAAGAAGAACTTGGGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR TCA 90 bp | GGTCACCCACATTGCTCATCTACAGGGACTATATCCTTCCTTATGTaGTCCTGTTGGACAAGACCTTCTAGACTACTCATGAAGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GHPHCSSTGTISFLM*SCWTRPSRLLMKLL Trigger: CAGGAGCTTCATGAGTAGTCTAGAAGGTCTTGTCCAACAGGATCACATAAGGAAGGATATAGTCCCTGTAGATGAGCAATGTGGGTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR CCA 90 bp | GCTATGAAGTCTCTTGTCCTCTCCAACCCAGAAAGGAGGATAGCCTaGTTCATTCTGAGTCCATGCAAGGGAGGCAATTACTTTTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: AMKSLVLSNPERRIA*FILSPCKGGNYFCV Trigger: TACACAAAAGTAATTGCCTCCCTTGCATGGACTCAGAATGAACCAGGCTATCCTCCTTTCTGGGTTGGAGAGGACAAGAGACTTCATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR CCA 90 bp | AGGAGCTGTAAAAATAGCTCCTTACGTAGAAGGGAAGATGCTCTGTaGTATCCACATTTACCTGGCAAGCACAGGCTTCTCTCAGATCCT | + |
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Preference number: 1 (lower is better) Translates to: RSCKNSSLRRREDAL*YPHLPGKHRLLSDP Trigger: AGGATCTGAGAGAAGCCTGTGCTTGCCAGGTAAATGTGGATACCACAGAGCATCTTCCCTTCTACGTAAGGAGCTATTTTTACAGCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR GCA 90 bp | TGTGTGCACACCAGTAAAGTCAGCACAGGTCAACACTGGATGGTTTaGTCTCGGGTTTTCACAGTCTTCTATTGGACAAAGACATTTCAG | + |
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Preference number: 1 (lower is better) Translates to: CVHTSKVSTGQHWMV*SRVFTVFYWTKTFQ Trigger: CTGAAATGTCTTTGTCCAATAGAAGACTGTGAAAACCCGAGAGCAAACCATCCAGTGTTGACCTGTGCTGACTTTACTGGTGTGCACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR CCA 90 bp | TTCCAGGAGATACATACAGTTCACCAAGGAAGAACACAAGGAATATaGCCCTTCCTCTGTGCACTGCAAATGATTTTAGGTGGACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: FQEIHTVHQGRTQGI*PFLCALQMILGGQG Trigger: ACCCTGTCCACCTAAAATCATTTGCAGTGCACAGAGGAAGGGCCATATTCCTTGTGTTCTTCCTTGGTGAACTGTATGTATCTCCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR CCA 90 bp | ATTAATAAAGGGAAAGATCCTTTAACCCAGGCCGTCCTGCCTGCCTaGCAGAATTATGCTAAGAGATTCAGACGGCTGCTTTTGCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: INKGKDPLTQAVLPA*QNYAKRFRRLLLPN Trigger: ATTTGGCAAAAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCCAGGCAGGCAGGACGGCCTGGGTTAAAGGATCTTTCCCTTTATTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR GCA 90 bp | CTTTACAATGCGCCCGAGGACTCTGATTGTATTCATTTTTGTTGTTaGTGCTATGAAGTCTCTTGTCCTCTCCAACCCAGAAAGGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LYNAPEDSDCIHFCC*CYEVSCPLQPRKED Trigger: ATCCTCCTTTCTGGGTTGGAGAGGACAAGAGACTTCATAGCAGCAACAACAAAAATGAATACAATCAGAGTCCTCGGGCGCATTGTAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR GCA 90 bp | CCGTCCTGCCTGCCTGGCAGAATTATGCTAAGAGATTCAGACGGCTaGTTTTGCCAAATTCTACCTAGTATTTTTCCTAAGCAAGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: PSCLPGRIMLRDSDG*FCQILPSIFPKQVY Trigger: ATAAACTTGCTTAGGAAAAATACTAGGTAGAATTTGGCAAAAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCCAGGCAGGCAGGACGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR CCA 90 bp | CCCACTGTACATTTCTTTTCTCTTCATGAGCATCCAAAAACCCTTTaGCTTCCTAAGTATCTCTGGTTACCAGGAAGAAATTCCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: PTVHFFSLHEHPKTL*LPKYLWLPGRNSLC Trigger: GCAGAGGGAATTTCTTCCTGGTAACCAGAGATACTTAGGAAGCCAAAGGGTTTTTGGATGCTCATGAAGAGAAAAGAAATGTACAGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR TCA 90 bp | ATTGACAGCCATCATGCCAAGTCCCCAAAGTCTATTTCTCCAACTTaGGATGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATT | + |
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Preference number: 1 (lower is better) Translates to: IDSHHAKSPKSISPT*DVWRLLVSLGLSCI Trigger: AATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACATCTCAAGTTGGAGAAATAGACTTTGGGGACTTGGCATGATGGCTGTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
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| 3UTR GCA 90 bp | GTAATTAGCTATACGAATGTTATTTGGGTCATTTGCTGTTGGCGCTaGCTAAAATTGCTTCATACCCAAGGAGCTGTAAAAATAGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: VISYTNVIWVICCWR*LKLLHTQGAVKIAP Trigger: AGGAGCTATTTTTACAGCTCCTTGGGTATGAAGCAATTTTAGGCAGCGCCAACAGCAAATGACCCAAATAACATTCGTATAGCTAATTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR GCA 90 bp | TGCCTGCCTGGCAGAATTATGCTAAGAGATTCAGACGGCTGCTTTTaGCAAATTCTACCTAGTATTTTTCCTAAGCAAGTTTATTTACAT | + |
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Preference number: 1 (lower is better) Translates to: CLPGRIMLRDSDGCF*QILPSIFPKQVYLH Trigger: ATGTAAATAAACTTGCTTAGGAAAAATACTAGGTAGAATTTGGCAAAAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCCAGGCAGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR CCA 90 bp | CTTAAACTATACGGGTTCATAGAATTTACAAGGATAATACATAAGTaGATGTACATACAAACAAGGCCTAAGGCGGATACAGAAACGAGG | + |
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Preference number: 1 (lower is better) Translates to: LKLYGFIEFTRIIHK*MYIQTRPKADTETR Trigger: CCTCGTTTCTGTATCCGCCTTAGGCCTTGTTTGTATGTACATCCACTTATGTATTATCCTTGTAAATTCTATGAACCCGTATAGTTTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR-3UTR TCA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTGGAGACATAGGTGCCTaGCTCTGGGAGAAGGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTGDIGA*LWEKVW Trigger: CCAAACCTTCTCCCAGAGTCAGGCACCTATGTCTCC...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTGTCCTATTGTTCAAATaGCTAGTGGCAGGACTCCCG | + |
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Preference number: 2 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTVLLFK*LVAGLP Trigger: CGGGAGTCCTGCCACTAGGCATTTGAACAATAGGAC...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTTTCATTGGGAGGCCATaGGTTGGGAATACCGAACAG | + |
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Preference number: 2 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTFIGRP*VGNTEQ Trigger: CTGTTCGGTATTCCCAACCCATGGCCTCCCAATGAA...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR TCA 90 bp | CCGTCCTGCCTGCCTGGCAGAATTATGCTAAGAGATTCAGACGGCTGCTTTTGCCTGGTGGTGACCCCATaGACTCAGGCACTGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PSCLPGRIMLRDSDGCFCLVVTP*TQALVP Trigger: AGGAACCAGTGCCTGAGTTCATGGGGTCACCACCAG...GCAAAAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCCAGGCAGGCAGGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR-3UTR CCA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTACTATTACCTGGCTATaGTTTGCTGAGCCTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTTITWL*FAEPCL Trigger: CAAGCAAGGCTCAGCAAACCATAGCCAGGTAATAGT...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR CAA 90 bp | CCTCACCACGGCCAACTGTTAACATCAAGGGGAACCTGTGCCATGTaGCCTGGGACTTCCCATAAGACATGCCTGCTGCTGCATCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PHHGQLLTSRGTCAM*PGTSHKTCLLLHPS Trigger: AGAAGGATGCAGCAGCAGGCATGTCTTATGGGAAGTCCCAGGCAACATGGCACAGGTTCCCCTTGATGTTAACAGTTGGCCGTGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR-3UTR GCA 90 bp | CGGCCAACTGTTAACATCAAGGGGAACCTGTGCCATGTTGCCTGGGACTTCCCAGTGTGGATGGACAGGTaGACCTTAGCCTTACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RPTVNIKGNLCHVAWDFPVWMDR*TLALLS Trigger: GGACAGTAAGGCTAAGGTGCACCTGTCCATCCACAC...TGGGAAGTCCCAGGCAACATGGCACAGGTTCCCCTTGATGTTAACAGTTGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGTTTTCAGAGCTGCCTATCATGCTCAAGCCCGCCGCTCTGAGCATGTGTGAAAGGAAGACTGGCTaGCCTGACCCTTTAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: CGFSELPIMLKPAALSMCERKTG*PDPLAL Trigger: AAGGGCTAAAGGGTCAGGCCAGCCAGTCTTCCTTTC...ACACATGCTCAGAGCGGCGGGCTTGAGCATGATAGGCAGCTCTGAAAACCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGCTGCTATGAAGTCTCTTGTCCTCTCCAACCCAGAAAGGAGGATAGCCTGGGAAGACTGGCTGGCCTaGCCCTTTAGCCCTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: VAAMKSLVLSNPERRIAWEDWLA*PFSPSK Trigger: TTTGGAAGGGCTAAAGGGTCAGGCCAGCCAGTCTTC...CCAGGCTATCCTCCTTTCTGGGTTGGAGAGGACAAGAGACTTCATAGCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR-3UTR CCA 90 bp | AAGACTTCAGTGCCAACCCAGTGCTGTCTGTCTGGTGGTGACCCCATGAACTCAGAAAGGAAGACTGGCTaGCCTGACCCTTTAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: KTSVPTQCCLSGGDPMNSERKTG*PDPLAL Trigger: AAGGGCTAAAGGGTCAGGCCAGCCAGTCTTCCTTTC...TGAGTTCATGGGGTCACCACCAGACAGACAGCACTGGGTTGGCACTGAAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCAAAAGGGACCAGAAAGGGGTGTGAGTGTGACCCTGGCAAGGACTACAAGCCTGGCTATGGTTTGCTaGGCCTTGCTTGCTATAGGT | + |
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Preference number: 2 (lower is better) Translates to: FQKGPERGVSVTLARTTSLAMVC*ALLAIG Trigger: ACCTATAGCAAGCAAGGCTCAGCAAACCATAGCCAG...GCTTGTAGTCCTTGCCAGGGTCACACTCACACCCCTTTCTGGTCCCTTTTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR TCA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTTTTCTTTTCTCTTCATaGGCATCCAAAAACCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTFLFSS*ASKNPL Trigger: CAAAGGGTTTTTGGATGCTCATGAAGAGAAAAGAAA...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTCCCTTGCTAAAACTGTaGTATTTGCAACAGACATTT | + |
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Preference number: 2 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTPLLKL*YLQQTF Trigger: AAATGTCTGTTGCAAATAGCACAGTTTTAGCAAGGG...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTTTCACAGTCTTCTATTaGACAAAGACATTTCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTFTVFY*TKTFQP Trigger: TGGCTGAAATGTCTTTGTCCAATAGAAGACTGTGAA...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTTTGTCACCATTGCATTaGGATTATTTTGTGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTLSPLH*DYFVCA Trigger: AGCACACACAAAATAATCCCAATGCAATGGTGACAA...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR GCA 90 bp | CCGTCCTGCCTGCCTGGCAGAATTATGCTAAGAGATTCAGACGGCTGCTTTTGCCCACCTGTCACCAATTaGCATGGAGGCAGATATTGT | + |
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Preference number: 2 (lower is better) Translates to: PSCLPGRIMLRDSDGCFCPPVTN*HGGRYC Trigger: ACAATATCTGCCTCCATGGCAATTGGTGACAGGTGG...GCAAAAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCCAGGCAGGCAGGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCAAAAGGGACCAGAAAGGGGTGTGAGTGTGACCCTGGCAAGGACTACAAGCTGCAGACTTTCCCTGTaGTTACAGACCAATGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: FQKGPERGVSVTLARTTSCRLSL*LQTNAA Trigger: AGCAGCATTGGTCTGTAACCACAGGGAAAGTCTGCA...GCTTGTAGTCCTTGCCAGGGTCACACTCACACCCCTTTCTGGTCCCTTTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR CAA 90 bp | ATACAAACAAGGCCTAAGGCGGATACAGAAACGAGGAAACAAAGCTaGCCAGGGCTGGGAGCTGTAGAGAGCTTACCTGGCATTCATGAG | + |
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Preference number: 2 (lower is better) Translates to: IQTRPKADTETRKQS*PGLGAVESLPGIHE Trigger: CTCATGAATGCCAGGTAAGCTCTCTACAGCTCCCAGCCCTGGCAAGCTTTGTTTCCTCGTTTCTGTATCCGCCTTAGGCCTTGTTTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
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| 3UTR CAA 90 bp | GCTCAGCTTAAGCATCCCAGCTCCACTGACAAGTCAGTGCCTTTTTaGCAAAGTGTGTCCTTTAGGAGACAGCCAGCTATCTCCGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: AQLKHPSSTDKSVPF*QSVSFRRQPAISGN Trigger: ATTCCCGGAGATAGCTGGCTGTCTCCTAAAGGACACACTTTGCAAAAAAGGCACTGACTTGTCAGTGGAGCTGGGATGCTTAAGCTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR TCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGGGAGACATAGGTGCCTaGCTCTGGGAGAAGGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQGDIGA*LWEKVW Trigger: CCAAACCTTCTCCCAGAGTCAGGCACCTATGTCTCC...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTTTTCAGAGCTGCCTATCATGCTCAAGCCCGCCGCTCTGAGCATGTGTCAAGGACTACAAGCATaGGATAGGAGTCTTAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CGFSELPIMLKPAALSMCQGLQA*DRSLRK Trigger: TTTCCTAAGACTCCTATCTCATGCTTGTAGTCCTTG...ACACATGCTCAGAGCGGCGGGCTTGAGCATGATAGGCAGCTCTGAAAACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTTTTCAGAGCTGCCTATCATGCTCAAGCCCGCCGCTCTGAGCATGTGTATGCATGCAAGGAGGTaGGACACTTGTCATGATTTA | + |
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Preference number: 2 (lower is better) Translates to: CGFSELPIMLKPAALSMCMHARR*DTCHDL Trigger: TAAATCATGACAAGTGTCTCACCTCCTTGCATGCAT...ACACATGCTCAGAGCGGCGGGCTTGAGCATGATAGGCAGCTCTGAAAACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGCCTCCACCAGGTCCTTaGAGAAGCTCTGGATCCCTA | + |
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Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQPPPGP*RSSGSL Trigger: TAGGGATCCAGAGCTTCTGCAAGGACCTGGTGGAGG...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGCCCATAAGACATGCCTaGTGCTGCATCCTTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQPIRHA*CCILLP Trigger: AGGGAGAAGGATGCAGCAGCAGGCATGTCTTATGGG...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGGTCCTATTGTTCAAATaGCTAGTGGCAGGACTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQVLLFK*LVAGLP Trigger: CGGGAGTCCTGCCACTAGGCATTTGAACAATAGGAC...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGACTTCAGTGCCAACCCAGTGCTGTCTGTCTGGTGGTGACCCCATGAACTCATTCATTCTGAGTCCATaGAAGGGAGGCAATTACTTT | + |
|
Preference number: 2 (lower is better) Translates to: KTSVPTQCCLSGGDPMNSFILSP*KGGNYF Trigger: AAAGTAATTGCCTCCCTTGCATGGACTCAGAATGAA...TGAGTTCATGGGGTCACCACCAGACAGACAGCACTGGGTTGGCACTGAAGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGAGACTTTTTCCAGAGTaGGCCTGTGGTCCTCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQRLFPE*ACGPQV Trigger: AACCTGAGGACCACAGGCGCACTCTGGAAAAAGTCT...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGGTTAGTTACACGCCTGACCTTCTTTTTCATAGGAATTCTGGGTATCCCATGCTCATCAAGCAGGTaGAACATCAGAAGTTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LGLVTRLTFFFIGILGIPCSSSR*NIRSSP Trigger: GGGGGAACTTCTGATGTTCCACCTGCTTGATGAGCA...TGGGATACCCAGAATTCCTATGAAAAAGAAGGTCAGGCGTGTAACTAACCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTGAAGGTGACAGCAACTGCTTTACAATGCGCCCGAGGACTCTGATTGTATTCCAAGGACTACAAGCATaGGATAGGAGTCTTAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GEGDSNCFTMRPRTLIVFQGLQA*DRSLRK Trigger: TTTCCTAAGACTCCTATCTCATGCTTGTAGTCCTTG...GAATACAATCAGAGTCCTCGGGCGCATTGTAAAGCAGTTGCTGTCACCTTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGTGGCTTCCAGGACCATaGAAATCAACATCCTTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQWLPGP*KSTSLL Trigger: GAGCAAGGATGTTGATTTTCATGGTCCTGGAAGCCA...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGACTTCAGTGCCAACCCAGTGCTGTCTGTCTGGTGGTGACCCCATGAACTCACATTTTTGTTGTTGCTaGTATGAAGTCTCTTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KTSVPTQCCLSGGDPMNSHFCCC*YEVSCP Trigger: AGGACAAGAGACTTCATAGCAGCAACAACAAAAATG...TGAGTTCATGGGGTCACCACCAGACAGACAGCACTGGGTTGGCACTGAAGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTGCACCTTAGCCTTACTGTCCATCTTCCAGGAGATACATACAGTTCACCAATGGCCCTTCCTCTGTaGACTGCAAATGATTTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: QVHLSLTVHLPGDTYSSPMALPL*TANDFR Trigger: CCTAAAATCATTTGCAGTGCACAGAGGAAGGGCCAT...TGGTGAACTGTATGTATCTCCTGGAAGATGGACAGTAAGGCTAAGGTGCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGGAAAGGAGGATAGCCTaGTTCATTCTGAGTCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQERRIA*FILSPC Trigger: GCATGGACTCAGAATGAACCAGGCTATCCTCCTTTC...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGCAACTTGCGGAGTACTaGCAGCAACTAAGACTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQQLAEY*QQLRLL Trigger: AAGAAGTCTTAGTTGCTGTCAGTACTCCGCAAGTTG...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGGAAAATCAACATCCTTaGTCCCCCAGTACAAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQENQHP*SPSTSV Trigger: CACACTTGTACTGGGGGAGCAAGGATGTTGATTTTC...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTACTTTCTGCCAGGCACAGTAGTTCACCATCTTTGGGAGGCAGAGACAGGTTTACCAATTGTACATaGTTAGAAAAGCAAAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: ALLSARHSSSPSLGGRDRFTNCT*LEKQRP Trigger: TGGCCTTTGCTTTTCTAAGCATGTACAATTGGTAAA...CCTGTCTCTGCCTCCCAAAGATGGTGAACTACTGTGCCTGGCAGAAAGTAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTAGTAATAAATATATTCACCTTACCAACAAGAAAGGAAGACTGGCTGGCCCCAAGGCCCAGTCTCTaGCTGCATTGTCACCATTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLVINIFTLPTRKEDWLAPRPSL*LHCHHC Trigger: GCAATGGTGACAATGCAGTCAGAGACTGGGCCTTGG...GGCCAGCCAGTCTTCCTTTCTTGTTGGTAAGGTGAATATATTTATTACTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTAGTAATAAATATATTCACCTTACCAACAAGAAAGGAAGACTGGCTGGCCGAGGGTGAGCAGAGGTaGTTCAGAGAAACAAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: SLVINIFTLPTRKEDWLAEGEQR*FRETSP Trigger: GGGGCTTGTTTCTCTGAAGCACCTCTGCTCACCCTC...GGCCAGCCAGTCTTCCTTTCTTGTTGGTAAGGTGAATATATTTATTACTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTAGTAATAAATATATTCACCTTACCAACAAGAAAGGAAGACTGGCTGGCCCTGGCATGTGACAGATaGGTTCATGCTCGTGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SLVINIFTLPTRKEDWLALACDR*VHAREG Trigger: ACCCTCACGAGCATGAACTCATCTGTCACATGCCAG...GGCCAGCCAGTCTTCCTTTCTTGTTGGTAAGGTGAATATATTTATTACTAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CAA 90 bp | AGTCCTGACCCTGAGGTATCCATGGAGGATTTAACTGTCACCAACTaGAATGACAAGACACACCACCATACTTTATACTATGTGACATGT | + |
|
Preference number: 2 (lower is better) Translates to: SPDPEVSMEDLTVTN*NDKTHHHTLYYVTC Trigger: ACATGTCACATAGTATAAAGTATGGTGGTGTGTCTTGTCATTCAAGTTGGTGACAGTTAAATCCTCCATGGATACCTCAGGGTCAGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGCACATCATCAGTTATTaGGACTTAAACTATACGGGT | + |
|
Preference number: 2 (lower is better) Translates to: CMEAFSLSGIELYCHGNQHIISY*DLNYTG Trigger: ACCCGTATAGTTTAAGTCTCAATAACTGATGATGTG...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGGTTAGTTACACGCCTGACCTTCTTTTTCATAGGAATTCTGGGTATCCCACACAAAATTAAACTATaGATGCAAGGAGGTGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LGLVTRLTFFFIGILGIPHKIKL*MQGGET Trigger: TGTCTCACCTCCTTGCATGCATAGTTTAATTTTGTG...TGGGATACCCAGAATTCCTATGAAAAAGAAGGTCAGGCGTGTAACTAACCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTAGTAATAAATATATTCACCTTACCAACAAGAAAGGAAGACTGGCTGGCCGTAGTTCACCATCTTTaGGAGGCAGAGACAGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: SLVINIFTLPTRKEDWLAVVHHL*EAETGL Trigger: GAGTCCTGTCTCTGCCTCCCAAAGATGGTGAACTAC...GGCCAGCCAGTCTTCCTTTCTTGTTGGTAAGGTGAATATATTTATTACTAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTAGTAATAAATATATTCACCTTACCAACAAGAAAGGAAGACTGGCTGGCCCAGGTCAACACTGGATaGTTTGCTCTCGGGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLVINIFTLPTRKEDWLAQVNTG*FALGFS Trigger: TGAAAACCCGAGAGCAAACCATCCAGTGTTGACCTG...GGCCAGCCAGTCTTCCTTTCTTGTTGGTAAGGTGAATATATTTATTACTAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTAGTAATAAATATATTCACCTTACCAACAAGAAAGGAAGACTGGCTGGCCTGTCACCAATTGCCATaGAGGCAGATATTGTTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SLVINIFTLPTRKEDWLACHQLP*RQILFH Trigger: GTGAAACAATATCTGCCTCCATGGCAATTGGTGACA...GGCCAGCCAGTCTTCCTTTCTTGTTGGTAAGGTGAATATATTTATTACTAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTTGTGGGATTCTTGTATTTATGTGGACAACAGATTTTGGTTCTTCTAGTGACGCAAATGATTTTAGGTaGACAGGGTTGGAGCTATAC | + |
|
Preference number: 2 (lower is better) Translates to: FCGILVFMWTTDFGSSSDANDFR*TGLELY Trigger: GTATAGCTCCAACCCTGTCCACCTAAAATCATTTGC...GTCACTAGAAGAACCAAAATCTGTTGTCCACATAAATACAAGAATCCCACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTCACGGCAACCAGGGCTaGCCTGTTCTTAGACTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTHGNQG*PVLRLE Trigger: CTCGAGTCTAAGAACAGGCAAGCCCTGGTTGCCGTG...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CCA 72 bp | AGGAAGGAATGGACCCGAGTGCCACGTGAAGCAGTGTaGCATCATCCAGTGTTGAGTAGGAGGGGGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RKEWTRVPREAV*HHPVLSRRGQE Trigger: CTCCTGCCCCCTCCTACTCAACACTGGATGATGCCACACTGCTTCACGTGGCACTCGGGTCCATTCCTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR TCA 72 bp | TTGGACAAAGACATTTCAGCCAAACCGGGTGCTCTGTaGGCCTGTCTCCTCCCCGCCAGCACTGGGGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LDKDISAKPGAL*ACLLPASTGVS Trigger: ACTAACCCCAGTGCTGGCGGGGAGGAGACAGGCTCACAGAGCACCCGGTTTGGCTGAAATGTCTTTGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR TCA 72 bp | GGTGAGCAGAGGTGCTTCAGAGAAACAAGCCCCGACTaGGAGCGGACTGTGGGTTTTCAGAGCTGCCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: GEQRCFRETSPD*ERTVGFQSCLS Trigger: TGATAGGCAGCTCTGAAAACCCACAGTCCGCTCTCAGTCGGGGCTTGTTTCTCTGAAGCACCTCTGCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR GCA 72 bp | GGCCAGGTCATTGTTACTGGCAAGAACCAACTCTGCTaGCCCCAGGGGTTCTTCCACCTTTCTTTCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GQVIVTGKNQLC*PQGFFHLSFWV Trigger: CACCCAGAAAGAAAGGTGGAAGAACCCCTGGGGGCAGCAGAGTTGGTTCTTGCCAGTAACAATGACCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR GCA 72 bp | ACTGGAGCTAGTTCAACAGCAGTGGTATTAGCCCCGTaGCTGCTGACTTACAGGCATGCACATGGGCCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: TGASSTAVVLAP*LLTYRHAHGPV Trigger: TACGGGCCCATGTGCATGCCTGTAAGTCAGCAGGCACGGGGCTAATACCACTGCTGTTGAACTAGCTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CCA 72 bp | GTGAGCATGCTTCCAAGTCTGTCTCCTGCTTCATGGTaGGGTAGCCCAATGTATTGGGGTGTGATGGTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: VSMLPSLSPASW*GSPMYWGVMVA Trigger: CGCCACCATCACACCCCAATACATTGGGCTACCCCACCATGAAGCAGGAGACAGACTTGGAAGCATGCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CCA 72 bp | AGGGCTGAGATCAATGCTGACCTCAGGGGCAGAATCTaGAGAAGGCCCAGGGAAGTGGCCGGTACACTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: RAEINADLRGRI*RRPREVAGTLY Trigger: ATAAAGTGTACCGGCCACTTCCCTGGGCCTTCTCCAGATTCTGCCCCTGAGGTCAGCATTGATCTCAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CCA 72 bp | GACAGCCCTTGGAAGACTTTTTCCAGAGTGCGCCTGTaGTCCTCAGGTTCTGCCCCTTCTGAACAGCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: DSPWKTFSRVRL*SSGSAPSEQHL Trigger: CAAGTGCTGTTCAGAAGGGGCAGAACCTGAGGACCACAGGCGCACTCTGGAAAAAGTCTTCCAAGGGCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR TCA 72 bp | TGCCAACCCAGTGCTGTCTGTCTGGTGGTGACCCCATaGACTCAGGCACTGGTTCCTACAAGATGCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: CQPSAVCLVVTP*TQALVPTRCRS Trigger: TGATCTGCATCTTGTAGGAACCAGTGCCTGAGTTCATGGGGTCACCACCAGACAGACAGCACTGGGTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR TCA 72 bp | GACTTCAGTGCCAACCCAGTGCTGTCTGTCTGGTGGTaGCCCCATGAACTCAGGCACTGGTTCCTACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DFSANPVLSVWW*PHELRHWFLQD Trigger: ATCTTGTAGGAACCAGTGCCTGAGTTCATGGGGTCACCACCAGACAGACAGCACTGGGTTGGCACTGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR GCA 72 bp | TCAGATCCTCCGCTGCCGGGTCCACCTGTCACCAATTaGCATGGAGGCAGATATTGTTTCACTGGCACTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SDPPLPGPPVTN*HGGRYCFTGTN Trigger: GTTAGTGCCAGTGAAACAATATCTGCCTCCATGGCAATTGGTGACAGGTGGACCCGGCAGCGGAGGATCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CCA 72 bp | ACCTCAGGGGCAGAATCTGGAGAAGGCCCAGGGAAGTaGCCGGTACACTTTATTCCTAGCATTTCTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSGAESGEGPGK*PVHFIPSISER Trigger: CCTCTCAGAAATGCTAGGAATAAAGTGTACCGGCCACTTCCCTGGGCCTTCTCCAGATTCTGCCCCTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR TCA 72 bp | TGCTGCTCCCCGAACCCTAAGCCAGTCATGAATAGATaGCCCAGATCATCAACACCCAGCCATGCACATAGC | + |
|
Preference number: 3 (lower is better) Translates to: CCSPNPKPVMNR*PRSSTPSHAHS Trigger: GCTATGTGCATGGCTGGGTGTTGATGATCTGGGTCATCTATTCATGACTGGCTTAGGGTTCGGGGAGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR TCA 72 bp | TGCGTGCTGCCAGGGGAGACCATGCTTCTAAGTCAGTaGAGCAGTGGAAATCTGGCTAAACAGAAGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CVLPGETMLLSQ*SSGNLAKQKPK Trigger: CTTGGGCTTCTGTTTAGCCAGATTTCCACTGCTTCACTGACTTAGAAGCATGGTCTCCCCTGGCAGCACGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR GCA 72 bp | TCCTCTGGCTTCCAGGACCATGAAAATCAACATCCTTaGTCCCCCAGTACAAGTGTGGATGGACAGGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SSGFQDHENQHP*SPSTSVDGQVH Trigger: GTGCACCTGTCCATCCACACTTGTACTGGGGGAGCAAGGATGTTGATTTTCATGGTCCTGGAAGCCAGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CCA 72 bp | GGGAAAGATCCTTTAACCCAGGCCGTCCTGCCTGCCTaGCAGAATTATGCTAAGAGATTCAGACGGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GKDPLTQAVLPA*QNYAKRFRRLL Trigger: AAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCCAGGCAGGCAGGACGGCCTGGGTTAAAGGATCTTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTTACGTAGAAGGGAAGATGCTCTGTGGTATCCACATTTACCTGGCAAGCACAGGAACCTGTGCCATGTaGCCTGGGACTTCCCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: PYVEGKMLCGIHIYLASTGTCAM*PGTSHK Trigger: CTTATGGGAAGTCCCAGGCAACATGGCACAGGTTCC...TGTGCTTGCCAGGTAAATGTGGATACCACAGAGCATCTTCCCTTCTACGTAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR TCA 72 bp | TTCACCTTACCAACAAGAAAGGAAGACTGGCTGGCCTaGCCCTTTAGCCCTTCCAAAAGGGACCAGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FTLPTRKEDWLA*PFSPSKRDQKG Trigger: CCCTTTCTGGTCCCTTTTGGAAGGGCTAAAGGGTCAGGCCAGCCAGTCTTCCTTTCTTGTTGGTAAGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
||
| 3UTR CCA 72 bp | TCTCTTGTCCTCTCCAACCCAGAAAGGAGGATAGCCTaGTTCATTCTGAGTCCATGCAAGGGAGGCAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLVLSNPERRIA*FILSPCKGGNY Trigger: GTAATTGCCTCCCTTGCATGGACTCAGAATGAACCAGGCTATCCTCCTTTCTGGGTTGGAGAGGACAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CCA 72 bp | TGCCCCCAGGGGTTCTTCCACCTTTCTTTCTGGGTGTaGGATACGATGAACTTACCTTCCATTCCATCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: CPQGFFHLSFWV*DTMNLPSIPSL Trigger: TAGAGATGGAATGGAAGGTAAGTTCATCGTATCCCACACCCAGAAAGAAAGGTGGAAGAACCCCTGGGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CCA 72 bp | CTCTTCCAGTTTCTAGGAGACCTAAGCCCTGTCCTGTaGATGAGGGTGGGATCTAAGCACCAATTTTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LFQFLGDLSPVL*MRVGSKHQFSD Trigger: GTCAGAAAATTGGTGCTTAGATCCCACCCTCATCCACAGGACAGGGCTTAGGTCTCCTAGAAACTGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR GCA 72 bp | GTGGAAATCTGGCTAAACAGAAGCCCAAGTTCTTCTTaGTACACCAAGGCCCAGTCTCTGACTGCATTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VEIWLNRSPSSS*YTKAQSLTALS Trigger: TGACAATGCAGTCAGAGACTGGGCCTTGGTGTAGCAAGAAGAACTTGGGCTTCTGTTTAGCCAGATTTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGTTAGTTACACGCCTGACCTTCTTTTTCATAGGAATTCTGGGTATCCCAAGTAGTTCACCATCTTaGGGAGGCAGAGACAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LGLVTRLTFFFIGILGIPSSSPS*GGRDRT Trigger: AGTCCTGTCTCTGCCTCCCAAAGATGGTGAACTACT...TGGGATACCCAGAATTCCTATGAAAAAGAAGGTCAGGCGTGTAACTAACCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGTCAACACTGGATGGTTaGCTCTCGGGTTTTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: CMEAFSLSGIELYCHGNQSTLDG*LSGFHS Trigger: ACTGTGAAAACCCGAGAGCAAACCATCCAGTGTTGA...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGCAGTCTCTGACTGCATaGTCACCATTGCATTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CMEAFSLSGIELYCHGNQQSLTA*SPLHWD Trigger: ATCCCAATGCAATGGTGACAATGCAGTCAGAGACTG...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR TCA 72 bp | AACATTATGCTAAAGCTGCCAAGAGCCACTTGTTCTTaGGGCTGGCTAGATAGGAAGGTATGGCGCACCTAT | + |
|
Preference number: 3 (lower is better) Translates to: NIMLKLPRATCS*GWLDRKVWRTY Trigger: ATAGGTGCGCCATACCTTCCTATCTAGCCAGCCTCAAGAACAAGTGGCTCTTGGCAGCTTTAGCATAATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CCA 72 bp | ATATATTCACCTTACCAACAAGAAAGGAAGACTGGCTaGCCTGACCCTTTAGCCCTTCCAAAAGGGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IYSPYQQERKTG*PDPLALPKGTR Trigger: TCTGGTCCCTTTTGGAAGGGCTAAAGGGTCAGGCCAGCCAGTCTTCCTTTCTTGTTGGTAAGGTGAATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
||
| 3UTR CCA 72 bp | TGGATGGTTTGCTCTCGGGTTTTCACAGTCTTCTATTaGACAAAGACATTTCAGCCAAACCGGGTGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WMVCSRVFTVFY*TKTFQPNRVLC Trigger: ACAGAGCACCCGGTTTGGCTGAAATGTCTTTGTCCAATAGAAGACTGTGAAAACCCGAGAGCAAACCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR GCA 72 bp | ACCAGTAAAGTCAGCACAGGTCAACACTGGATGGTTTaGTCTCGGGTTTTCACAGTCTTCTATTGGACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSKVSTGQHWMV*SRVFTVFYWTK Trigger: CTTTGTCCAATAGAAGACTGTGAAAACCCGAGAGCAAACCATCCAGTGTTGACCTGTGCTGACTTTACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CCA 72 bp | AAAAATAGCTCCTTACGTAGAAGGGAAGATGCTCTGTaGTATCCACATTTACCTGGCAAGCACAGGCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KNSSLRRREDAL*YPHLPGKHRLL Trigger: GAGAAGCCTGTGCTTGCCAGGTAAATGTGGATACCACAGAGCATCTTCCCTTCTACGTAAGGAGCTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CCA 72 bp | GGGCCATTCTCAAGAGGTAAGATAGGAAGATTTCATTaGGAGGCCATGGGTTGGGAATACCGAACAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GPFSRGKIGRFH*EAMGWEYRTEK Trigger: TTTTTCTGTTCGGTATTCCCAACCCATGGCCTCCCAATGAAATCTTCCTATCTTACCTCTTGAGAATGGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR TCA 72 bp | CATCATGCCAAGTCCCCAAAGTCTATTTCTCCAACTTaGGATGTATGGAGGCTTTTAGTCTCTCTGGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: HHAKSPKSISPT*DVWRLLVSLGL Trigger: CAATCCCAGAGAGACTAAAAGCCTCCATACATCTCAAGTTGGAGAAATAGACTTTGGGGACTTGGCATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGTTAGTTACACGCCTGACCTTCTTTTTCATAGGAATTCTGGGTATCCCAATTGCTAACATGAGTTaGTTCCCAGATGTCTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: LGLVTRLTFFFIGILGIPIANMS*FPDVLP Trigger: TGGTAAGACATCTGGGAACAAACTCATGTTAGCAAT...TGGGATACCCAGAATTCCTATGAAAAAGAAGGTCAGGCGTGTAACTAACCCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR TCA 72 bp | ATAGACATCTTTAAGCTCCAGAAGCAGCAGAATGGGTaGTGTTATAGAATCCATAGACCTTCCCAGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IDIFKLQKQQNG*CYRIHRPSQGE Trigger: TTCTCCCTGGGAAGGTCTATGGATTCTATAACATCACCCATTCTGCTGCTTCTGGAGCTTAAAGATGTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGATACATACAGTTCACCAAGGAAGAACACAAGGAATATGGCCCTTCCTCTGTGTCTATTTCTCCAACTaGAGATGTATGGAGGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EIHTVHQGRTQGIWPFLCVYFSN*RCMEAF Trigger: AAAAGCCTCCATACATCTCAAGTTGGAGAAATAGAC...ACAGAGGAAGGGCCATATTCCTTGTGTTCTTCCTTGGTGAACTGTATGTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGTTAGTTACACGCCTGACCTTCTTTTTCATAGGAATTCTGGGTATCCCAACTGTTATGGACTCTTaGGCTAGATACATTTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGLVTRLTFFFIGILGIPTVMDS*ARYILG Trigger: TCCTAAAATGTATCTAGCCAAAGAGTCCATAACAGT...TGGGATACCCAGAATTCCTATGAAAAAGAAGGTCAGGCGTGTAACTAACCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR GCA 72 bp | CTGCCTGGCAGAATTATGCTAAGAGATTCAGACGGCTaGTTTTGCCAAATTCTACCTAGTATTTTTCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPGRIMLRDSDG*FCQILPSIFPK Trigger: CTTAGGAAAAATACTAGGTAGAATTTGGCAAAAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCCAGGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CCA 72 bp | ATACATACAGTTCACCAAGGAAGAACACAAGGAATATaGCCCTTCCTCTGTGCACTGCAAATGATTTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: IHTVHQGRTQGI*PFLCALQMILG Trigger: ACCTAAAATCATTTGCAGTGCACAGAGGAAGGGCCATATTCCTTGTGTTCTTCCTTGGTGAACTGTATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CCA 72 bp | ATTAGCTATACGAATGTTATTTGGGTCATTTGCTGTTaGCGCTGCCTAAAATTGCTTCATACCCAAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ISYTNVIWVICC*RCLKLLHTQGA Trigger: AGCTCCTTGGGTATGAAGCAATTTTAGGCAGCGCCAACAGCAAATGACCCAAATAACATTCGTATAGCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR TCA 72 bp | GGTATCCATGGAGGATTTAACTGTCACCAACTTGAATaGCAAGACACACCACCATACTTTATACTATGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GIHGGFNCHQLE*QDTPPYFILCD Trigger: GTCACATAGTATAAAGTATGGTGGTGTGTCTTGTCATTCAAGTTGGTGACAGTTAAATCCTCCATGGATACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR GCA 72 bp | TATACGAATGTTATTTGGGTCATTTGCTGTTGGCGCTaGCTAAAATTGCTTCATACCCAAGGAGCTGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YTNVIWVICCWR*LKLLHTQGAVK Trigger: TTTTACAGCTCCTTGGGTATGAAGCAATTTTAGGCAGCGCCAACAGCAAATGACCCAAATAACATTCGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR GCA 72 bp | GGCAGAATTATGCTAAGAGATTCAGACGGCTGCTTTTaGCAAATTCTACCTAGTATTTTTCCTAAGCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GRIMLRDSDGCF*QILPSIFPKQV Trigger: AACTTGCTTAGGAAAAATACTAGGTAGAATTTGGCAAAAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTAGTAATAAATATATTCACCTTACCAACAAGAAAGGAAGACTGGCTGGCCGTCTATTTCTCCAACTaGAGATGTATGGAGGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLVINIFTLPTRKEDWLAVYFSN*RCMEAF Trigger: AAAAGCCTCCATACATCTCAAGTTGGAGAAATAGAC...GGCCAGCCAGTCTTCCTTTCTTGTTGGTAAGGTGAATATATTTATTACTAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
||
| CDS-3UTR TCA 90 bp | GGGACGGCTGTCACACAGGACTCGGGGGCTCAGCTTAAGCATCCCAGCTCCACTTTTGGGTGGCAGTGCTaGATGGGTGGAGCCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTAVTQDSGAQLKHPSSTFGWQC*MGGAIP Trigger: GGGGATGGCTCCACCCATTCAGCACTGCCACCCAAA...AGTGGAGCTGGGATGCTTAAGCTGAGCCCCCGAGTCCTGTGTGACAGCCGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| CDS-3UTR GCA 90 bp | TGTATGGAGGCTTTTAGTCTCTCTGGGATTGAGTTGTATTGTCACGGCAACCAGAGGCGCTGCAGCCGCTaGACCGCCCACAGCGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: CMEAFSLSGIELYCHGNQRRCSR*TAHSER Trigger: GCGTTCGCTGTGGGCGGTGCAGCGGCTGCAGCGCCT...CTGGTTGCCGTGACAATACAACTCAATCCCAGAGAGACTAAAAGCCTCCATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGAAAGGGGTGTGAGTGTGACCCTGGCAAGGACTACAAGCATGAGATAGGATTTGGGTGGCAGTGCTaGATGGGTGGAGCCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TRKGCECDPGKDYKHEIGFGWQC*MGGAIP Trigger: GGGGATGGCTCCACCCATTCAGCACTGCCACCCAAA...TCCTATCTCATGCTTGTAGTCCTTGCCAGGGTCACACTCACACCCCTTTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
||
| 3UTR CAA 72 bp | AGGCCTAAGGCGGATACAGAAACGAGGAAACAAAGCTaGCCAGGGCTGGGAGCTGTAGAGAGCTTACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPKADTETRKQS*PGLGAVESLPG Trigger: GCCAGGTAAGCTCTCTACAGCTCCCAGCCCTGGCAAGCTTTGTTTCCTCGTTTCTGTATCCGCCTTAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CAA 72 bp | GGCCAACTGTTAACATCAAGGGGAACCTGTGCCATGTaGCCTGGGACTTCCCATAAGACATGCCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLLTSRGTCAM*PGTSHKTCLLL Trigger: CAGCAGCAGGCATGTCTTATGGGAAGTCCCAGGCAACATGGCACAGGTTCCCCTTGATGTTAACAGTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR TCA 90 bp | AAGACTTCAGTGCCAACCCAGTGCTGTCTGTCTGGTGGTGACCCCATGAACTCAACACCTGCTGGCATGTaGCAGATGAGTTCATGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KTSVPTQCCLSGGDPMNSTPAGM*QMSSCS Trigger: CGAGCATGAACTCATCTGTCACATGCCAGCAGGTGT...TGAGTTCATGGGGTCACCACCAGACAGACAGCACTGGGTTGGCACTGAAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR GCA 90 bp | ACCAGAAAGGGGTGTGAGTGTGACCCTGGCAAGGACTACAAGCATGAGATAGGACCTCCACCAGGTCCTTaGAGAAGCTCTGGATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TRKGCECDPGKDYKHEIGPPPGP*RSSGSQ Trigger: TTGGGATCCAGAGCTTCTGCAAGGACCTGGTGGAGG...TCCTATCTCATGCTTGTAGTCCTTGCCAGGGTCACACTCACACCCCTTTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR GCA 90 bp | CGGCCAACTGTTAACATCAAGGGGAACCTGTGCCATGTTGCCTGGGACTTCCCAAGACTTTTTCCAGAGTaGGCCTGTGGTCCTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPTVNIKGNLCHVAWDFPRLFPE*ACGPQV Trigger: AACCTGAGGACCACAGGCGCACTCTGGAAAAAGTCT...TGGGAAGTCCCAGGCAACATGGCACAGGTTCCCCTTGATGTTAACAGTTGGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAACCCAGAAAGGAGGATAGCCTGGTTCATTCTGAGTCCATGCAAGGGAAGGTTCTGCCCCTTCTaGACAGCACTTGGCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSNPERRIAWFILSPCKGRFCPF*TALGSL Trigger: AAGACTGCCAAGTGCTGTTCAGAAGGGGCAGAACCT...TCCCTTGCATGGACTCAGAATGAACCAGGCTATCCTCCTTTCTGGGTTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR TCA 90 bp | GGTGAAGGTGACAGCAACTGCTTTACAATGCGCCCGAGGACTCTGATTGTATTCCTGGCATGTGACAGATaGGTTCATGCTCGTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGDSNCFTMRPRTLIVFLACDR*VHAREG Trigger: ACCCTCACGAGCATGAACTCATCTGTCACATGCCAG...GAATACAATCAGAGTCCTCGGGCGCATTGTAAAGCAGTTGCTGTCACCTTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGGGTTCTTCCACCTTTCTTTCTGGGTGTGGGATACGATGAACTTACCTTCCTGTACCCCAACACCTaGTGGCATGTGACAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGVLPPFFLGVGYDELTFLYPNT*WHVTDE Trigger: CTCATCTGTCACATGCCAGCAGGTGTTGGGGTACAG...GAAGGTAAGTTCATCGTATCCCACACCCAGAAAGAAAGGTGGAAGAACCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCACCTTAGCCTTACTGTCCATCTTCCAGGAGATACATACAGTTCACCAGAACTAATGCCACGGTaGCAGGCTGTACCCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QVHLSLTVHLPGDTYSSPELMPR*QAVPQH Trigger: GTGTTGGGGTACAGCCTGGCACCGTGGCATTAGTTC...TGGTGAACTGTATGTATCTCCTGGAAGATGGACAGTAAGGCTAAGGTGCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR CCA 90 bp | CCGTCCTGCCTGCCTGGCAGAATTATGCTAAGAGATTCAGACGGCTGCTTTTGCTCCTTGCAGAAGCTCTaGATCCCAAATATCTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSCLPGRIMLRDSDGCFCSLQKL*IPNIFA Trigger: CGCGAAGATATTTGGGATCCAGAGCTTCTGCAAGGA...GCAAAAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCCAGGCAGGCAGGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR CCA 90 bp | GGTGAAGGTGACAGCAACTGCTTTACAATGCGCCCGAGGACTCTGATTGTATTCAGCAGGGACAGCCCTTaGAAGACTTTTTCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGDSNCFTMRPRTLIVFSRDSP*KTFSRV Trigger: CACTCTGGAAAAAGTCTTCCAAGGGCTGTCCCTGCT...GAATACAATCAGAGTCCTCGGGCGCATTGTAAAGCAGTTGCTGTCACCTTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CAA 72 bp | GCTCTACTTTCTGCCAGGCACAGTAGTTCACCATCTTaGGGAGGCAGAGACAGGACTCTGTTAAGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSARHSSSPS*GGRDRTLLSSK Trigger: CTTGGAACTTAACAGAGTCCTGTCTCTGCCTCCCAAAGATGGTGAACTACTGTGCCTGGCAGAAAGTAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTTTTCAGAGCTGCCTATCATGCTCAAGCCCGCCGCTCTGAGCATGTGTCTCAGGGTTAAATCCTaGACTTCCTTTTCCAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CGFSELPIMLKPAALSMCLRVKS*TSFSSL Trigger: TAAACTGGAAAAGGAAGTCCAGGATTTAACCCTGAG...ACACATGCTCAGAGCGGCGGGCTTGAGCATGATAGGCAGCTCTGAAAACCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CAA 72 bp | CTGGATGGTTTGCTCTCGGGTTTTCACAGTCTTCTATaGGACAAAGACATTTCAGCCAAACCGGGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDGLLSGFHSLL*DKDISAKPGAL Trigger: CAGAGCACCCGGTTTGGCTGAAATGTCTTTGTCCAATAGAAGACTGTGAAAACCCGAGAGCAAACCATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CAA 72 bp | AGTGGAAATCTGGCTAAACAGAAGCCCAAGTTCTTCTaGCTACACCAAGGCCCAGTCTCTGACTGCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNLAKQKPKFF*LHQGPVSDCIV Trigger: GACAATGCAGTCAGAGACTGGGCCTTGGTGTAGCAAGAAGAACTTGGGCTTCTGTTTAGCCAGATTTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| CDS-3UTR CCA 90 bp | CCGTCCTGCCTGCCTGGCAGAATTATGCTAAGAGATTCAGACGGCTGCTTTTGCCTCAGGGTTAAATCCTaGACTTCCTTTTCCAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PSCLPGRIMLRDSDGCFCLRVKS*TSFSSL Trigger: TAAACTGGAAAAGGAAGTCCAGGATTTAACCCTGAG...GCAAAAGCAGCCGTCTGAATCTCTTAGCATAATTCTGCCAGGCAGGCAGGACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CAA 72 bp | TTGTCACCGATGGGTGTCATTTTCTCTAGGCCATGCTaGGTAAATACGCTTTTCAGTCTGGCTTCTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPMGVIFSRPC*VNTLFSLASSR Trigger: CCTGCTAGAAGCCAGACTGAAAAGCGTATTTACCAAGCATGGCCTAGAGAAAATGACACCCATCGGTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CAA 72 bp | CCATCATGCCAAGTCCCCAAAGTCTATTTCTCCAACTaGAGATGTATGGAGGCTTTTAGTCTCTCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PSCQVPKVYFSN*RCMEAFSLSGI Trigger: AATCCCAGAGAGACTAAAAGCCTCCATACATCTCAAGTTGGAGAAATAGACTTTGGGGACTTGGCATGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062991.9 ENSMUST00000238010.2 |
||
| 3UTR CAA 72 bp | CCTGAGGTATCCATGGAGGATTTAACTGTCACCAACTaGAATGACAAGACACACCACCATACTTTATACTAT | + |
|
Preference number: 4 (lower is better) Translates to: PEVSMEDLTVTN*NDKTHHHTLYY Trigger: ATAGTATAAAGTATGGTGGTGTGTCTTGTCATTCAAGTTGGTGACAGTTAAATCCTCCATGGATACCTCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| 3UTR CAA 72 bp | AGGATAATAAACTGGCTAGCAATTGCTAACATGAGTTaGTTCCCAGATGTCTTACCATCTATTTCTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RIINWLAIANMS*FPDVLPSISRV Trigger: TACTCGAGAAATAGATGGTAAGACATCTGGGAACAAACTCATGTTAGCAATTGCTAGCCAGTTTATTATCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238010.2 |
||
| 3UTR CAA 72 bp | AAGACCTCTTATGCTAAAACCTTTATCAAGTTTACCTaGTGTATTATTCGCGCATTAAGGTATTTACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTSYAKTFIKFT*CIIRALRYLLG Trigger: GCCCAGTAAATACCTTAATGCGCGAATAATACACAAGGTAAACTTGATAAAGGTTTTAGCATAAGAGGTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||
| CDS-3UTR CAA 90 bp | AAGACTTCAGTGCCAACCCAGTGCTGTCTGTCTGGTGGTGACCCCATGAACTCAACCTCCACCAGGTCCTaGCAGAAGCTCTGGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KTSVPTQCCLSGGDPMNSTSTRS*QKLWIP Trigger: TGGGATCCAGAGCTTCTGCAAGGACCTGGTGGAGGT...TGAGTTCATGGGGTCACCACCAGACAGACAGCACTGGGTTGGCACTGAAGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062991.9 |
||